Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0004493

Physical Location & Seq

Genomic Coordinates Forward (+)

17419641 .. 17428081

Gene Structure 8441 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1156500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5103 bp

ATGAAGCAGCAGCAGAGCTCATCATCGTCTGAGGCGGTATCGTCGTCGTCGTCCTCCTCCTCCTCCGCCGTATCCACTGCAGCCGACCATTCGCTGCCCGCCACCTCATCGCCGAATTCGGGAGCCTCCGAAAAGCTTTCGTCGATACCTGCGGCGGCACAGGAGGACCTCGCTGTGGGGTCCAGGGACGGCAGCGGGGCACAAGAGAGCGTGACCGTCGATCGGCGGGGCGAGTACTCTGCGGTCTGCCGATGGACGGTCCAGAACTTTCCGAGAATCAAGGCTAGGGCACTGTGGAGCAATTACTTCGAGGTAGGGGGATACGATTGCCGGTTGCTAATATACCCTAAGGGTGACTCACAGGCGCTGCCGGGGTACATCTCGATATACCTCCAAATCATGGACCCGCGGGGCACGTCGTCGTCCAAATGGGACTGCTTCGCGAGTTACCGGCTCGCCATCGTTAACCTCGCCGACGATTCCAAGACCATTCATCGCGATTCTTGGCATCGGTTCTCGAGCAAGAAGAAATCTCACGGTTGGTGCGATTTTACGCCTTCTTCAACTGTCTTTGAATCGAAATTAGGTTATTTGTTCAATACGGACTCCGTTTTGATTACCGCCGATATCTTGATATTGAATGAGTCCGTTAATTTTACGCGAGATAGTAATAACAATAACAATGAGCTCCAATCGTCCGCCGGCTCGATGATGTCTGGTTCCGCCGTGGCCGGGCCGGTTTCCGATGTGTTGAGTGGCAAGTTCACATGGAAAGTTCATAACTTTAGTTTGTTTAAGGAGATGGTTAAGAATCAGAAGATAATGAGCCCGGTGTTTCCTGCTGGAGAGTGTAATTTGAGGATTAGTGTGTACCAGAGCTCGGTGAACGGCGTGGAGTATTTGTCAATGTGTTTGGAGAGCAAGGACACGGACAAGACGGTTGTGTTGTCTGATAGGAGTTGTTGGTGTTTGTTTCGAATGTCGGTGTTGAACCAAAAGCCTGCGACTAATCACATGCATAGGGACTCGTATGGGAGATTTGCTGCCGATAATAAGAGTGGGGATAACACTAGTTTGGGGTGGAATGATTATATGAAGATGTCGGATTTTGTTGGGACTGAGTCGGGGTTTTTATTGGATGATACTGCAGTGTTTAGTACATCATTTCATGTGATAAAGGAATTTAGTAGCTTTTCGAAGAATGGAGGATTAATTACTGGGAGGAGTGGTAGTGGGGCAAGGAAGTTGGATGGTCACATTGGGAAATTCAATTGGAGGATTGAAAACTTCACTAGGTTGAAGGATCTTTTAAAGAAGAGGAAGATAACAGGTCTCTGCATCAAGAGCAGGAGGTTTCAGATTGGAAATCGAGACTGTCGACTCATAGTTTATCCCCGAGGGCAGTCTCAGCCACCATGCCACCTTTCAGTGTTTCTTGAAGTTACTGATTCACGGAATACTTCCAGTGACTGGAGTTGTTTTGTGAGCCATCGTTTGTCGGTTGTTAACCAGAGGATGGAGGAGAAGTCTGTCACAAAGGAGTCTCAGAACCGCTACTCCAAAGCTGCAAAGGACTGGGGCTGGCGTGAATTTGTGACGCTTACTAGTCTATTTGATCAAGATTCAGGGTTTCTAGTTCAGGACACTGTTGTATTCTCCGCGGAGGTCCTTATATTGAAGGAGACATCAATAATGCAGGAGTTTACTGATCAGGATAATGTGTCAAGCGATGCCGGTTTGCAGATTGATAAGAATGGGAGAAGAAGTTCCTTCACATGGAAGGTGGAGAACTTCCTGTCTTTTAAGGAAATAATGGAGACTAGAAAAATCTTTAGCAAATTCTTCCAAGCTGGTGGATGTGAAATTCGAATTGGTGTATATGAGTCCTTTGACACCATATGTATTTATTTGGAGAGTGACCAGTCAGTTGGTAGTGATCTGGATAAAAACTTTTGGGTTAGATACAGGATGGCTGTTGTGAATCAAAAGAACCCTGCTAAAACTGTGTGGAAGGAATCATCTATATGTACAAAGACTTGGAACAATTCTGTTTTGCAATTCATGAAGGTGTCAGATATGTTGGAAGCAGATGCAGGGTTTCTTGTTCGTGATACTGTTGTTTTTGTCTGCGAAATATTGGACTGCTGTCCTTGGTTTGAGTTTTCAGATCTAGAGGTTTTTGCTTTGGATGATGATCAGGATGCATTAACAACAGATCCTGATGAGCTAGTTGATTCTGAAGATAGTGAAGGAGTTGGTGGTGATGAAGAAGATATCTTTAGAAACCTACTTTCTAGAGCTGGATTTCACCTCACATACGGAGATAATCCTTCACAGCCACAGGTCACTCTACGAGAAAAGCTTCTGATGGATGCTGGTGCTATTGCTGGTTTTCTGACTGGGCTCCGTGTTTATCTTGATGACCCTGCTAAAGTAAAACGCCTGCTTCTTCCAACCAAGCTTTCTAGTAGCGGCGATGGAATGAAGGTCATAAAGAATGATGAATCTTCCCCTAGTTTGATGAATTTGCTAATGGGAGTCAAAGTTCTGCAGCAGGCGATCATTGATTTACTTCTGGACATTATGGTTGAGTGTTGCCAACCTACAGAAGGGACTTCTAATGGTGACTTGTCTGATGCAAACTCAAAGTCTCCAGATGGAAGCGGAGCTGCTAGTCCGCTGCAATCTGATAGAGAAAATGGAGCTACAGAATCTTCGGATTGTCCTGTGTGTGAAAGATTGGATACTAGCGCTGATGAAACTAGCAGCAGCACTTCGGCTGTTCAGAGCTCTGACGTGAATGGGATTGGTGTACCTGGAAAAACTCTTCCTGGGAAACCAATTTGTCTTCCAGAAACATCTGCCGGGGTGTCAGAAAATGTCACCCTTCGCTCAAAGACTAAGTGGCCTGAGCAATCAGAGGAGCTCTTAGGATTGATTGTAAACTCATTGAGAGCTCTAGATGGAGCTGTTCCACAAGGATGTCCTGAACCAAGACGTCGGCCTCAGTCTGCACAAAAGATCGCTCTTGTACTGGATAAAGCGCCGAAGCATCTGCAGCCCGATCTTGTTGCTTTGGTGCCCAAGTTGGTTGAGCACTCAGAGCATCCACTTGCTGCTTTTGCACTTATAGAACGACTTCAAAAACCAGATGCAGAACCTGCTTTGCGGACACCTGTTTTTGGTGCTCTTAGTCAACTGGACTGTGGCAGTGTAGTGTGGGAACGAGTTTTATCTCAATCTCTTGAGTTTTTGCCAGATTCAAATGATGAGCCTCTTGCTGCAACCATAGATTTTATATTTAAAGCAGCATCCCAGTGCCAACACCTGCCTGAAGCGGTCAGATCGGTTCGTGTTAGGCTAAGGAATTTGGGTGCCGACGTTTCTCCTTGTGTTCTTGAATTTTTGAGTAGAACTGTAAATAGCTGGGGAGATGTTGCTGAAACCATACTGAGAGATATTGATTGTGACGATGATTTTGGTGACACTTGCTCGACATTGTATTCTGGTCTTTTCTTGTTTGGTGAACATGGACCAATTTCTGAACGGTTTCATTTGGTGGATAAGCAGACTTTCCACGCGAGTCGTCACTTTTCTGACATTTACATCTTGATTGAGATGTTATCCATACCTTGTCTGGCTGTTGAAGCCTCTCAAACATTTGAGAGAGCTGTAGCTCGTGGTGCCATTGTGGCTCATTCTGTGGCCATGGTTTTGGAAAGGCGCCTTGCTCAAAGATTGAATCTTGATGCTAGATTTGTTGGGGATAATTTTCAGCAGACTGATGTTGCAGCAGAGGAAGATGCCAATGAACAGCTGAGAGTCCAACGAGACGATTTTACATCCGTTCTTGGTCTTGCTGAAACATTGGCCCTCTCTAGAGATCCGTGTATTAAGGGATTTGTGAAGATGCTGTATACGTTATTATTTAAATGGTATGCTGACAAGACTTATCGAGGGAGAATGCTAAAGAGACTTGTAGATCAAGCCACTAGCACTACAGATAGTAGCCGTGAAGTTGATCTAGATTTGGATATCTTGGTGACCTTGGCTTCTGAAGAACAAGAAATTATCAGACCAGTTTTGAGTATGATGCGGGAGGTTGCTGAGCTTGCAAACGTTGATCGTGCTGCTCTGTGGCACCAGTTATGTGCCAGTGAAGATGAAATAATTTGCATGCGTGAAGAAAGGAAAGCCGAAAATGCTACTATGGTTAAAGAAAAAGCTGTTCTATCGCAAAAACTAAGTGACTCTGAAGCTACTAACACTCGTCTTAAGTCTGAAATGAAGGCTGAGATTGACCGCTTTGCTCGAGAAAAGAAGGAACTATCCGAACAAATACAAGAAGTTGAGAGTCAGCTTGAGTGGTACCGCTCCGAGCGAGATGATGAAATCAGAAAGCTCACTACAGAGAGGAAAGTGCTTCAGGATCGTCTTCATGATGCAGAGACACAACTCTCTCAATTGAAGTCCCGAAAACGTGATGAATTGAAGAAATTGGTGAAGGAGAAAAATGCTCTTGCTGAAAGGTTGAAAAGCACTGAAGGTGCACGTAAAAGATTTGATGAAGAACTTAAACGGTATGCCACAGAGAATGTAACCCGAGAGGAAGTTCGACAGTCTCTTGAGGATGAAGTACGGCGATTGAAACAAACAGTGGAGCAAACAGAAGGAGAGAAACGGGCGAAGGAAGAGCAGGTTGCTCGGTGTGAGGCGTATATTGATGGGATGGAATCAAAATTACAGGCCTGCCAGCAATATATTCACACCCTCGAGGCTTCACTTCAGGAAGAAATGTCGCGGCATGCTCCTCTGTATGGGGCTGGTTTGGAAGCTCTATCAATGAAGGAGTTGGAGACACTTTCAAGCATCCATGAAGAAGGCCTCAGGCAGATCCATACCCTTCAGCAGCAGCGTAAAGGCAGTCCAGCCGGCAGTCCCCTTGTGGGCCCCCACGCCCTCCAACACGGTCATGGGTTATATCCTTCAACACCACCCCAGATGGCCGTAGGATTGCCTCGTCCTCTGATCCCAAATGGTGTCGGAATCCACAGCAATGGGCATGTGAATGGTAATGTTGGACCCTGGTTCAACCATTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0030054 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FancD2 MATH

Protein Analysis

1701

Amino Acids

189.55

Weight (kDa)

5.39

Isoelectric Point (pI)

45.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	84 - 210	8.8e-20	MATH domain
MATH	PF00917	88 - 212	1.2e-07	MATH domain
MATH_2	PF22486	254 - 386	6.8e-19	MATH domain
MATH_2	PF22486	422 - 556	4.4e-29	MATH domain
MATH	PF00917	452 - 558	1.1e-09	MATH domain
MATH_2	PF22486	590 - 712	7.6e-13	MATH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0004493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25320 AT2G25320 AT2G25320
fragaria_vesca	FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850
malus_domestica	MD08G1156500.v1.1 MD15G1127100.v1.1
prunus_persica	Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1
pyrus_communis	pycom08g12870 pycom15g11460
rosa_chinensis	RchiOBHm_Chr6g0297611
rosa_laevigata	RLG00000011577
rosa_multiflora	Rmu_ssc0000319.1_g000010
rosa_roxburghii	Rroxscaffold_7G00170320
rosa_rugosa	Rorug06G0274300 Rorug06G0274400.1 Rorug06G0274500 Rorug06G0274600
rosa_samantha	Rh6AG385100 Rh6BG393200 Rh6CG399000 Rh6DG385600
rosa_wichuraiana	Rw6G033550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3336
AatII	GACGTC	1 cut(s)	3001
AbsI	CCTCGAGG	1 cut(s)	4772
Acc36I	ACCTGC	4 cut(s)	157, 3169, 3336, 4687
Acc65I	GGTACC	1 cut(s)	4368
AccB1I	GGYRCC	6 cut(s)	3079, 3374, 3683, 3723, 4140, 4368
AccB7I	CCANNNNNTGG	3 cut(s)	400, 1470, 1516
AccBSI	CCGCTC	1 cut(s)	4374
AccI	GTMKAC	2 cut(s)	1378, 3917
AccII	CGCG	7 cut(s)	409, 443, 498, 661, 1661, 3581, 4801
AclI	AACGTT	1 cut(s)	4119
AclWI	GGATC	6 cut(s)	1311, 2210, 3878, 4437, 4888, 5023
AcoI	YGGCCR	3 cut(s)	729, 3705, 5004
AcsI	RAATTY	9 cut(s)	115, 1181, 1265, 1589, 1838, 1863, 2524, 3367, 3401
AcuI	CTGAAG	8 cut(s)	2259, 3354, 4077, 4275, 4409, 4563, 4769, 4889
AcyI	GRCGYC	2 cut(s)	2998, 3724
AfaI	GTAC	9 cut(s)	236, 377, 872, 1159, 2029, 2814, 3033, 4370, 4638
AfeI	AGCGCT	1 cut(s)	2752
AflII	CTTAAG	1 cut(s)	4274
AhlI	ACTAGT	2 cut(s)	1070, 1604
AjiI	CACGTC	2 cut(s)	417, 2797
AjnI	CCWGG	4 cut(s)	182, 2815, 2830, 5084
AjuI	GAANNNNNNNTTGG	4 cut(s)	1854, 1886, 2446, 2478
AloI	GAACNNNNNNTCC	6 cut(s)	1541, 1573, 1750, 1782, 2529, 2561
Alw21I	GWGCWC	9 cut(s)	20, 690, 881, 2792, 2928, 2959, 3099, 3190, 4552
Alw44I	GTGCAC	1 cut(s)	4548
AlwI	GGATC	6 cut(s)	1311, 2210, 3878, 4437, 4888, 5023
AlwNI	CAGNNNCTG	4 cut(s)	367, 1470, 2219, 3161
Ama87I	CYCGRG	5 cut(s)	517, 1395, 4311, 4602, 4772
Aor51HI	AGCGCT	1 cut(s)	2752
ApaI	GGGCCC	1 cut(s)	4952
ApaLI	GTGCAC	1 cut(s)	4548
ApoI	RAATTY	9 cut(s)	115, 1181, 1265, 1589, 1838, 1863, 2524, 3367, 3401
ArsI	GACNNNNNNTTYG	4 cut(s)	2633, 2665, 3461, 3493
AseI	ATTAAT	1 cut(s)	1211
Asp700I	GAANNNNTTC	4 cut(s)	1765, 2361, 3138, 3549
Asp718I	GGTACC	1 cut(s)	4368
AspLEI	GCGC	4 cut(s)	367, 2753, 3046, 3726
AsuC2I	CCSGG	4 cut(s)	372, 733, 830, 2866
AsuII	TTCGAA	3 cut(s)	976, 1196, 1867
AvaI	CYCGRG	5 cut(s)	517, 1395, 4311, 4602, 4772
AvaII	GGWCC	7 cut(s)	166, 180, 259, 403, 1666, 3533, 5081
AxyI	CCTNAGG	2 cut(s)	348, 4886
BaeGI	GKGCMC	6 cut(s)	202, 292, 416, 3084, 4552, 4952
BaeI	ACNNNNGTAYC	4 cut(s)	1134, 1167, 2103, 2136
BalI	TGGCCA	1 cut(s)	3707
BanI	GGYRCC	6 cut(s)	3079, 3374, 3683, 3723, 4140, 4368
BanII	GRGCYC	9 cut(s)	20, 690, 830, 881, 2406, 2792, 2928, 2959, 4952
BauI	CACGAG	1 cut(s)	3678
BbsI	GAAGAC	2 cut(s)	2840, 4427
Bbv12I	GWGCWC	9 cut(s)	20, 690, 881, 2792, 2928, 2959, 3099, 3190, 4552
BceAI	ACGGC	7 cut(s)	53, 205, 710, 904, 3996, 4655, 4991
BciT130I	CCWGG	4 cut(s)	184, 2817, 2832, 5086
BciVI	GTATCC	3 cut(s)	82, 314, 2737
BclI	TGATCA	3 cut(s)	1615, 1708, 2194
BcnI	CCSGG	4 cut(s)	372, 733, 830, 2866
BcuI	ACTAGT	2 cut(s)	1070, 1604
BfmI	CTRYAG	9 cut(s)	78, 1146, 2549, 2604, 2706, 3056, 3672, 3999, 4407
BfoI	RGCGCY	4 cut(s)	368, 2754, 3047, 3727
BfrI	CTTAAG	1 cut(s)	4274
BfuAI	ACCTGC	4 cut(s)	157, 3169, 3336, 4687
BfuI	GTATCC	3 cut(s)	82, 314, 2737
BglI	GCCNNNNNGGC	1 cut(s)	3692
BglII	AGATCT	1 cut(s)	2167
BlpI	GCTNAGC	1 cut(s)	4107
BmcAI	AGTACT	1 cut(s)	236
Bme1390I	CCNGG	8 cut(s)	184, 372, 733, 830, 2817, 2832, 2866, 5086
Bme18I	GGWCC	7 cut(s)	166, 180, 259, 403, 1666, 3533, 5081
BmeT110I	CYCGRG	5 cut(s)	517, 1395, 4311, 4602, 4772
BmgBI	CACGTC	2 cut(s)	417, 2797
BmrFI	CCNGG	8 cut(s)	184, 372, 733, 830, 2817, 2832, 2866, 5086
BmrI	ACTGGG	4 cut(s)	1227, 1585, 2409, 3310
BmuI	ACTGGG	4 cut(s)	1227, 1585, 2409, 3310
BoxI	GACNNNNGTC	1 cut(s)	2145
BpiI	GAAGAC	2 cut(s)	2840, 4427
BpmI	CTGGAG	3 cut(s)	864, 1492, 2637
Bpu10I	CCTNAGC	2 cut(s)	2910, 3362
Bpu1102I	GCTNAGC	1 cut(s)	4107
Bpu14I	TTCGAA	3 cut(s)	976, 1196, 1867
BpuEI	CTTGAG	3 cut(s)	3266, 4382, 4646
BpuMI	CCSGG	4 cut(s)	372, 733, 830, 2866
BsaAI	YACGTR	1 cut(s)	4553
BsaBI	GATNNNNATC	1 cut(s)	2193
BsaHI	GRCGYC	2 cut(s)	2998, 3724
BsaI	GGTCTC	1 cut(s)	1337
Bse118I	RCCGGY	6 cut(s)	330, 450, 701, 736, 1733, 4931
Bse21I	CCTNAGG	2 cut(s)	348, 4886
Bse3DI	GCAATG	1 cut(s)	5062
Bse8I	GATNNNNATC	1 cut(s)	2193
BseBI	CCWGG	4 cut(s)	184, 2817, 2832, 5086
BseJI	GATNNNNATC	1 cut(s)	2193
BseMI	GCAATG	1 cut(s)	5062
BseRI	GAGGAG	7 cut(s)	46, 49, 52, 1237, 1535, 2936, 4800
BseSI	GKGCMC	6 cut(s)	202, 292, 416, 3084, 4552, 4952
BseYI	CCCAGC	1 cut(s)	3426
BsgI	GTGCAG	1 cut(s)	2997
Bsh1236I	CGCG	7 cut(s)	409, 443, 498, 661, 1661, 3581, 4801
Bsh1285I	CGRYCG	1 cut(s)	223
BshNI	GGYRCC	6 cut(s)	3079, 3374, 3683, 3723, 4140, 4368
BsiEI	CGRYCG	1 cut(s)	223
BsiHKAI	GWGCWC	9 cut(s)	20, 690, 881, 2792, 2928, 2959, 3099, 3190, 4552
BsiHKCI	CYCGRG	5 cut(s)	517, 1395, 4311, 4602, 4772
BslFI	GGGAC	7 cut(s)	200, 446, 1037, 1129, 2626, 4456, 4923
BsmBI	CGTCTC	1 cut(s)	3825
BsmFI	GGGAC	7 cut(s)	200, 446, 1037, 1129, 2626, 4456, 4923
BsmI	GAATGC	1 cut(s)	3969
Bso31I	GGTCTC	1 cut(s)	1337
BsoBI	CYCGRG	5 cut(s)	517, 1395, 4311, 4602, 4772
Bsp119I	TTCGAA	3 cut(s)	976, 1196, 1867
Bsp120I	GGGCCC	1 cut(s)	4948
Bsp1407I	TGTACA	1 cut(s)	2027
Bsp1720I	GCTNAGC	1 cut(s)	4107
Bsp19I	CCATGG	1 cut(s)	3708
Bsp68I	TCGCGA	2 cut(s)	443, 498
BspFNI	CGCG	7 cut(s)	409, 443, 498, 661, 1661, 3581, 4801
BspHI	TCATGA	2 cut(s)	2061, 4438
BspMAI	CTGCAG	4 cut(s)	82, 1150, 2553, 3060
BspMI	ACCTGC	4 cut(s)	157, 3169, 3336, 4687
BspPI	GGATC	6 cut(s)	1311, 2210, 3878, 4437, 4888, 5023
BspQI	GCTCTTC	1 cut(s)	4686
BspT104I	TTCGAA	3 cut(s)	976, 1196, 1867
BspT107I	GGYRCC	6 cut(s)	3079, 3374, 3683, 3723, 4140, 4368
BspTI	CTTAAG	1 cut(s)	4274
BspTNI	GGTCTC	1 cut(s)	1337
BsrBI	CCGCTC	1 cut(s)	4374
BsrDI	GCAATG	1 cut(s)	5062
BsrFI	RCCGGY	6 cut(s)	330, 450, 701, 736, 1733, 4931
BsrGI	TGTACA	1 cut(s)	2027
BssAI	RCCGGY	6 cut(s)	330, 450, 701, 736, 1733, 4931
BssNAI	GTATAC	1 cut(s)	3918
BssNI	GRCGYC	2 cut(s)	2998, 3724
BssSI	CACGAG	1 cut(s)	3678
BssT1I	CCWWGG	3 cut(s)	2150, 3708, 4047
Bst1107I	GTATAC	1 cut(s)	3918
Bst2BI	CACGAG	1 cut(s)	3678
Bst2UI	CCWGG	4 cut(s)	184, 2817, 2832, 5086
Bst6I	CTCTTC	3 cut(s)	1310, 2832, 4686
BstACI	GRCGYC	2 cut(s)	2998, 3724
BstAFI	CTTAAG	1 cut(s)	4274
BstAPI	GCANNNNNTGC	1 cut(s)	3161
BstAUI	TGTACA	1 cut(s)	2027
BstBAI	YACGTR	1 cut(s)	4553
BstBI	TTCGAA	3 cut(s)	976, 1196, 1867
BstDSI	CCRYGG	4 cut(s)	407, 726, 1659, 3708
BstEII	GGTNACC	1 cut(s)	4042
BstENI	CCTNNNNNAGG	1 cut(s)	2607
BstFNI	CGCG	7 cut(s)	409, 443, 498, 661, 1661, 3581, 4801
BstH2I	RGCGCY	4 cut(s)	368, 2754, 3047, 3727
BstHHI	GCGC	4 cut(s)	367, 2753, 3046, 3726
BstMCI	CGRYCG	1 cut(s)	223
BstNI	CCWGG	4 cut(s)	184, 2817, 2832, 5086
BstNSI	RCATGY	4 cut(s)	1018, 4180, 4808, 5066
BstPAI	GACNNNNGTC	1 cut(s)	2145
BstPI	GGTNACC	1 cut(s)	4042
BstSCI	CCNGG	8 cut(s)	182, 370, 731, 828, 2815, 2830, 2864, 5084
BstSFI	CTRYAG	9 cut(s)	78, 1146, 2549, 2604, 2706, 3056, 3672, 3999, 4407
BstSLI	GKGCMC	6 cut(s)	202, 292, 416, 3084, 4552, 4952
BstUI	CGCG	7 cut(s)	409, 443, 498, 661, 1661, 3581, 4801
BstV2I	GAAGAC	2 cut(s)	2840, 4427
BstX2I	RGATCY	5 cut(s)	1303, 2167, 2215, 3883, 4893
BstXI	CCANNNNNNTGG	4 cut(s)	1853, 1928, 3715, 5057
BstYI	RGATCY	5 cut(s)	1303, 2167, 2215, 3883, 4893
BstZ17I	GTATAC	1 cut(s)	3918
Bsu36I	CCTNAGG	2 cut(s)	348, 4886
BsuI	GTATCC	3 cut(s)	82, 314, 2737
BtgI	CCRYGG	4 cut(s)	407, 726, 1659, 3708
BtgZI	GCGATG	4 cut(s)	93, 479, 1743, 2490
BtrI	CACGTC	2 cut(s)	417, 2797
BtsI	GCAGTG	3 cut(s)	75, 1155, 3217
BtuMI	TCGCGA	2 cut(s)	443, 498
BveI	ACCTGC	4 cut(s)	157, 3169, 3336, 4687
CaiI	CAGNNNCTG	4 cut(s)	367, 1470, 2219, 3161
CciI	TCATGA	2 cut(s)	2061, 4438
CfoI	GCGC	4 cut(s)	367, 2753, 3046, 3726
Cfr10I	RCCGGY	6 cut(s)	330, 450, 701, 736, 1733, 4931
Cfr42I	CCGCGG	2 cut(s)	410, 1662
CseI	GACGC	1 cut(s)	1606
Csp6I	GTAC	9 cut(s)	235, 376, 871, 1158, 2028, 2813, 3032, 4369, 4637
CviQI	GTAC	9 cut(s)	235, 376, 871, 1158, 2028, 2813, 3032, 4369, 4637
DinI	GGCGCC	1 cut(s)	3725
DraI	TTTAAA	3 cut(s)	1311, 3304, 3931
EaeI	YGGCCR	3 cut(s)	729, 3705, 5004
Eam1104I	CTCTTC	3 cut(s)	1310, 2832, 4686
EarI	CTCTTC	3 cut(s)	1310, 2832, 4686
EciI	GGCGGA	3 cut(s)	55, 688, 712
Ecl136II	GAGCTC	6 cut(s)	18, 688, 879, 2790, 2926, 2957
Eco130I	CCWWGG	3 cut(s)	2150, 3708, 4047
Eco147I	AGGCCT	2 cut(s)	4748, 4884
Eco24I	GRGCYC	9 cut(s)	20, 690, 830, 881, 2406, 2792, 2928, 2959, 4952
Eco31I	GGTCTC	1 cut(s)	1337
Eco32I	GATATC	3 cut(s)	628, 2275, 4036
Eco47I	GGWCC	7 cut(s)	166, 180, 259, 403, 1666, 3533, 5081
Eco47III	AGCGCT	1 cut(s)	2752
Eco53kI	GAGCTC	6 cut(s)	18, 688, 879, 2790, 2926, 2957
Eco57I	CTGAAG	8 cut(s)	2259, 3354, 4077, 4275, 4409, 4563, 4769, 4889
Eco81I	CCTNAGG	2 cut(s)	348, 4886
Eco88I	CYCGRG	5 cut(s)	517, 1395, 4311, 4602, 4772
Eco91I	GGTNACC	1 cut(s)	4042
EcoICRI	GAGCTC	6 cut(s)	18, 688, 879, 2790, 2926, 2957
EcoNI	CCTNNNNNAGG	1 cut(s)	2607
EcoO109I	RGGNCCY	3 cut(s)	166, 1666, 4949
EcoO65I	GGTNACC	1 cut(s)	4042
EcoRI	GAATTC	1 cut(s)	115
EcoRII	CCWGG	4 cut(s)	182, 2815, 2830, 5084
EcoRV	GATATC	3 cut(s)	628, 2275, 4036
EcoT14I	CCWWGG	3 cut(s)	2150, 3708, 4047
EcoT22I	ATGCAT	2 cut(s)	1020, 2206
EcoT38I	GRGCYC	9 cut(s)	20, 690, 830, 881, 2406, 2792, 2928, 2959, 4952
EgeI	GGCGCC	1 cut(s)	3725
EheI	GGCGCC	1 cut(s)	3725
ErhI	CCWWGG	3 cut(s)	2150, 3708, 4047
Esp3I	CGTCTC	1 cut(s)	3825
FaqI	GGGAC	7 cut(s)	200, 446, 1037, 1129, 2626, 4456, 4923
FauI	CCCGC	6 cut(s)	106, 188, 219, 402, 414, 4089
FauNDI	CATATG	1 cut(s)	1898
FbaI	TGATCA	3 cut(s)	1615, 1708, 2194
FblI	GTMKAC	2 cut(s)	1378, 3917
FriOI	GRGCYC	9 cut(s)	20, 690, 830, 881, 2406, 2792, 2928, 2959, 4952
GlaI	GCGC	4 cut(s)	366, 2752, 3045, 3725
GsaI	CCCAGC	1 cut(s)	3430
GsuI	CTGGAG	3 cut(s)	864, 1492, 2637
HaeII	RGCGCY	4 cut(s)	368, 2754, 3047, 3727
HgaI	GACGC	1 cut(s)	1606
HhaI	GCGC	4 cut(s)	367, 2753, 3046, 3726
Hin1I	GRCGYC	2 cut(s)	2998, 3724
Hin6I	GCGC	4 cut(s)	365, 2751, 3044, 3724
HinP1I	GCGC	4 cut(s)	365, 2751, 3044, 3724
HincII	GTYRAC	4 cut(s)	466, 1379, 1507, 3197
HindII	GTYRAC	4 cut(s)	466, 1379, 1507, 3197
HindIII	AAGCTT	3 cut(s)	134, 2360, 2459
HpaI	GTTAAC	2 cut(s)	466, 1507
HpyCH4IV	ACGT	8 cut(s)	416, 2796, 2998, 3381, 3920, 4119, 4480, 4552
HpySE526I	ACGT	8 cut(s)	416, 2796, 2998, 3381, 3920, 4119, 4480, 4552
Hsp92I	GRCGYC	2 cut(s)	2998, 3724
HspAI	GCGC	4 cut(s)	365, 2751, 3044, 3724
KasI	GGCGCC	1 cut(s)	3723
KpnI	GGTACC	1 cut(s)	4372
KroI	GCCGGC	2 cut(s)	701, 4931
KroNI	GCCGGC	2 cut(s)	703, 4933
Ksp22I	TGATCA	3 cut(s)	1615, 1708, 2194
KspAI	GTTAAC	2 cut(s)	466, 1507
KspI	CCGCGG	2 cut(s)	410, 1662
LguI	GCTCTTC	1 cut(s)	4686
MaeII	ACGT	8 cut(s)	416, 2796, 2998, 3381, 3920, 4119, 4480, 4552
MbiI	CCGCTC	1 cut(s)	4374
MfeI	CAATTG	2 cut(s)	1270, 4463
MflI	RGATCY	5 cut(s)	1303, 2167, 2215, 3883, 4893
MlsI	TGGCCA	1 cut(s)	3707
MluNI	TGGCCA	1 cut(s)	3707
Mly113I	GGCGCC	1 cut(s)	3724
MmeI	TCCRAC	9 cut(s)	1083, 1227, 2061, 2477, 3850, 4833, 4987, 5023, 5059
Mox20I	TGGCCA	1 cut(s)	3707
Mph1103I	ATGCAT	2 cut(s)	1020, 2206
MroNI	GCCGGC	2 cut(s)	701, 4931
MroXI	GAANNNNTTC	4 cut(s)	1765, 2361, 3138, 3549
MscI	TGGCCA	1 cut(s)	3707
MslI	CAYNNNNRTG	7 cut(s)	2023, 2066, 2980, 3316, 4971, 5055, 5067
Msp20I	TGGCCA	1 cut(s)	3707
MspA1I	CMGCKG	5 cut(s)	195, 409, 1661, 2680, 3817
MspCI	CTTAAG	1 cut(s)	4274
MspR9I	CCNGG	8 cut(s)	184, 372, 733, 830, 2817, 2832, 2866, 5086
MunI	CAATTG	2 cut(s)	1270, 4463
Mva1269I	GAATGC	1 cut(s)	3969
MvaI	CCWGG	4 cut(s)	184, 2817, 2832, 5086
MvnI	CGCG	7 cut(s)	409, 443, 498, 661, 1661, 3581, 4801
NaeI	GCCGGC	2 cut(s)	703, 4933
NarI	GGCGCC	1 cut(s)	3724
NciI	CCSGG	4 cut(s)	372, 733, 830, 2866
NcoI	CCATGG	1 cut(s)	3708
NdeI	CATATG	1 cut(s)	1898
NgoMIV	GCCGGC	2 cut(s)	701, 4931
NruI	TCGCGA	2 cut(s)	443, 498
NsiI	ATGCAT	2 cut(s)	1020, 2206
NspI	RCATGY	4 cut(s)	1018, 4180, 4808, 5066
NspV	TTCGAA	3 cut(s)	976, 1196, 1867
PaeI	GCATGC	2 cut(s)	4180, 4808
PaeR7I	CTCGAG	3 cut(s)	517, 4311, 4772
PagI	TCATGA	2 cut(s)	2061, 4438
PaqCI	CACCTGC	1 cut(s)	3336
PceI	AGGCCT	2 cut(s)	4748, 4884
PciSI	GCTCTTC	1 cut(s)	4686
PcsI	WCGNNNNNNNCGW	3 cut(s)	47, 543, 1375
PctI	GAATGC	1 cut(s)	3969
PdiI	GCCGGC	2 cut(s)	703, 4933
PdmI	GAANNNNTTC	4 cut(s)	1765, 2361, 3138, 3549
PflFI	GACNNNGTC	1 cut(s)	1120
PflMI	CCANNNNNTGG	3 cut(s)	400, 1470, 1516
Ple19I	CGATCG	1 cut(s)	223
PluTI	GGCGCC	1 cut(s)	3727
Ppu21I	YACGTR	1 cut(s)	4553
PpuMI	RGGWCCY	2 cut(s)	166, 1666
PshAI	GACNNNNGTC	1 cut(s)	2145
PshBI	ATTAAT	1 cut(s)	1211
Psp124BI	GAGCTC	6 cut(s)	20, 690, 881, 2792, 2928, 2959
Psp1406I	AACGTT	1 cut(s)	4119
Psp5II	RGGWCCY	2 cut(s)	166, 1666
Psp6I	CCWGG	4 cut(s)	182, 2815, 2830, 5084
PspEI	GGTNACC	1 cut(s)	4042
PspFI	CCCAGC	1 cut(s)	3426
PspGI	CCWGG	4 cut(s)	182, 2815, 2830, 5084
PspOMI	GGGCCC	1 cut(s)	4948
PspPPI	RGGWCCY	2 cut(s)	166, 1666
PspXI	VCTCGAGB	1 cut(s)	4772
PstI	CTGCAG	4 cut(s)	82, 1150, 2553, 3060
PstNI	CAGNNNCTG	4 cut(s)	367, 1470, 2219, 3161
PsuI	RGATCY	5 cut(s)	1303, 2167, 2215, 3883, 4893
PsyI	GACNNNGTC	1 cut(s)	1120
PvuI	CGATCG	1 cut(s)	223
PvuII	CAGCTG	1 cut(s)	3817
RruI	TCGCGA	2 cut(s)	443, 498
RsaI	GTAC	9 cut(s)	236, 377, 872, 1159, 2029, 2814, 3033, 4370, 4638
RsaNI	GTAC	9 cut(s)	235, 376, 871, 1158, 2028, 2813, 3032, 4369, 4637
RseI	CAYNNNNRTG	7 cut(s)	2023, 2066, 2980, 3316, 4971, 5055, 5067
SacI	GAGCTC	6 cut(s)	20, 690, 881, 2792, 2928, 2959
SacII	CCGCGG	2 cut(s)	410, 1662
SalI	GTCGAC	1 cut(s)	1377
SapI	GCTCTTC	1 cut(s)	4686
ScaI	AGTACT	1 cut(s)	236
ScrFI	CCNGG	8 cut(s)	184, 372, 733, 830, 2817, 2832, 2866, 5086
SfcI	CTRYAG	9 cut(s)	78, 1146, 2549, 2604, 2706, 3056, 3672, 3999, 4407
SfoI	GGCGCC	1 cut(s)	3725
Sfr274I	CTCGAG	3 cut(s)	517, 4311, 4772
Sfr303I	CCGCGG	2 cut(s)	410, 1662
SfuI	TTCGAA	3 cut(s)	976, 1196, 1867
SgrBI	CCGCGG	2 cut(s)	410, 1662
SinI	GGWCC	7 cut(s)	166, 180, 259, 403, 1666, 3533, 5081
SlaI	CTCGAG	3 cut(s)	517, 4311, 4772
SmiI	ATTTAAAT	1 cut(s)	3931
SmiMI	CAYNNNNRTG	7 cut(s)	2023, 2066, 2980, 3316, 4971, 5055, 5067
SmlI	CTYRAG	7 cut(s)	517, 3245, 4274, 4311, 4361, 4625, 4772
SmoI	CTYRAG	7 cut(s)	517, 3245, 4274, 4311, 4361, 4625, 4772
SpeI	ACTAGT	2 cut(s)	1070, 1604
SphI	GCATGC	2 cut(s)	4180, 4808
SseBI	AGGCCT	2 cut(s)	4748, 4884
SspDI	GGCGCC	1 cut(s)	3723
SspI	AATATT	1 cut(s)	2136
SstI	GAGCTC	6 cut(s)	20, 690, 881, 2792, 2928, 2959
StuI	AGGCCT	2 cut(s)	4748, 4884
StyD4I	CCNGG	8 cut(s)	182, 370, 731, 828, 2815, 2830, 2864, 5084
StyI	CCWWGG	3 cut(s)	2150, 3708, 4047
SwaI	ATTTAAAT	1 cut(s)	3931
TaiI	ACGT	8 cut(s)	419, 2799, 3001, 3384, 3923, 4122, 4483, 4555
TatI	WGTACW	4 cut(s)	234, 1157, 2027, 3031
TauI	GCSGC	4 cut(s)	155, 158, 2475, 4804
TspGWI	ACGGA	9 cut(s)	598, 617, 637, 944, 1468, 2334, 2396, 3835, 3876
Tth111I	GACNNNGTC	1 cut(s)	1120
Van91I	CCANNNNNTGG	3 cut(s)	400, 1470, 1516
Vha464I	CTTAAG	1 cut(s)	4274
VneI	GTGCAC	1 cut(s)	4548
VpaK11BI	GGWCC	7 cut(s)	166, 180, 259, 403, 1666, 3533, 5081
VspI	ATTAAT	1 cut(s)	1211
XagI	CCTNNNNNAGG	1 cut(s)	2607
XapI	RAATTY	9 cut(s)	115, 1181, 1265, 1589, 1838, 1863, 2524, 3367, 3401
XbaI	TCTAGA	5 cut(s)	2170, 2294, 2959, 3878, 4024
XceI	RCATGY	4 cut(s)	1018, 4180, 4808, 5066
XcmI	CCANNNNNNNNNTGG	2 cut(s)	3634, 4970
XhoI	CTCGAG	3 cut(s)	517, 4311, 4772
XmiI	GTMKAC	2 cut(s)	1378, 3917
XmnI	GAANNNNTTC	4 cut(s)	1765, 2361, 3138, 3549
ZraI	GACGTC	1 cut(s)	2999
ZrmI	AGTACT	1 cut(s)	236
Zsp2I	ATGCAT	2 cut(s)	1020, 2206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.