Rorug06G0274600

Protein FAR1-RELATED SEQUENCE 6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000252
Physical Location & Seq
Forward (+)
42176933 .. 42183924
6992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0274600.1

Sequence Viewer

Length: 1779 bp
ATGGCGGAAATCATAGAACCTCTCATCCCTGCAGATCAGACACCTCAAGCAGAAGCAGATGAACCGCCTCCAGACTTCGATCCCGAAACCATGCGTAAAACCAAGCCAGGCCTCAAGCGCCTCATCCTAACCCTCTCTGTCCTCTTCTCCTTCATTTTAGGCGTCCCGTTAATCTACAAATCCGTCGAAATTTACCGCGCGCCATTGCCGTTCCTCGAAATCGATTCTCTCTCAGCTGAAATCGATTCCAATCCGCTTCTATTTCCGTGTCGTTTCCAAGCAATCTTCGTCGGCTTCGACTCCAAATCCTCCACTACCTCTCTGGAATCTTCCATTCTTCACCAAATGACCGAATTGACTCGCCAAACGCCTCAATGCGGCACCTGTAGCCCCAACCACAGCGTCTCAGTACTCCTGGACTCCGATTCCGACCGTCTCGTCGGTGCCGTTGATTTCGACGGCGATGATGAGGCTGTGGATGAGGCTCTGCAGGCTGTGTTTGGGGTTGGTTCAGGCTCCGGCTCCGGCGGAGAGGTGTATACGGTGGTGGTGGTGAACAGGGGTGGGGAGGAGGTGAGAGCCGTGGTGGGCAAGTATAGGAATGCTTGGATTCTCGGTAGGGTTTCGGAGGCAGAGGCGGTGGCGAAGGCGGCGGAGGTGTTTGTTAAAGTGTTTGTGAATGGTGGGAAGGAGGAAGGATTGATTCATGGCGAGTTTATGCCTGTTGGTGCTGATGGAACACTTGTTCTGTCGTTCAATTTGCTAAATGCAGACCCTCGAGATTGGATTTATGATTGGGACTTTCAGACAGTAGATGAGATTCTGTTGGCTCCAATGATTGAGGCTATGAAACCTGTAGCAAACATAAGCGTGGAAAGTCAGGTGTTATACCATGTGCCGAAGTCCTCACTGTCTTACTGGGATGATAACTGGGACAGCTACATTTTCAGTACCAAGGATCTTCCTTTCTTTGTAAATTCAAACGAATGGCACTTGGATACATCCATTGCAGCTGGTGGGAGGTCAAAGATGTTGCACTTTGTGGTATATATACCATCTGCAAAGGAGTGCCCTCTTCTTCTACAGCTTCCAGATGGGCAGATTTCCAAGACAAATAGCTTTATATCTCCAATGTGGGGAGGTGTTATTGTGTTGAATCCCCAATCATGCAGAAAGAATTCAGAAAGTAAGCATCCTTCTAGGCATACAATTTTGCATGAGGATCTGCAGAAGGTTTTTGAGGTTTTCATGGGGCAGTTCCGCCAACTTTTTAGTTTTAAATCTGATAACTTGTATGTTGGGGCTTCAGGCACGTACAACCTTTTACCTAGTGAAAGAGGCTTCACAGTATGGGAATTAGATGTTCTGTCACGTATGCATACGTGCTTCAATCTTCATTCATGTGCCACAACCCTTGGATCTCTCTCCAGATTGGTTCAATCCTTGCCGAGGATGATTATAAAGGATGAGATTGGAAAGCAGGTGAAGTATTCTCTGGAGGCAGCAAAGTTGGCTCAAACTAATGCCTCTCTCGGTGTTTATGACGCTTCTGCTGTGTCTTCTAGGCAAGCAAGGTCTCTAGCAGAGGATGCCTTTTTTCATCCATCGATTATGTCGGTCAGCTACTATTCGTTCGAGCATTGTTTCGCTGTCTATTCGCCTTTCTTTCTGCCAGTTTCGATGCATGTTATATTGGCGGCTCTAAGAGAATGGAGAAGATACAAGAAAGAAAATAAGAAGTACTTAGTATGGAAGGCCAAAATGAAGGATGCATCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

592

Amino Acids

65.91

Weight (kDa)

5.36

Isoelectric Point (pI)

44.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PIG-S PF10510 46 - 577 4.9e-130 Phosphatidylinositol-glycan biosynthesis class S protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000252)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80010
fragaria_vesca FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1460
AarI CACCTGC 1 cut(s) 1471
AasI GACNNNNNNGTC 1 cut(s) 437
Acc36I ACCTGC 1 cut(s) 1471
AccB1I GGYRCC 2 cut(s) 380, 443
AccI GTMKAC 1 cut(s) 539
AccII CGCG 2 cut(s) 198, 200
AclWI GGATC 4 cut(s) 74, 966, 1230, 1426
AcsI RAATTY 3 cut(s) 189, 976, 1177
AcuI CTGAAG 1 cut(s) 1290
AcyI GRCGYC 1 cut(s) 162
AdeI CACNNNGTG 1 cut(s) 1042
AfaI GTAC 4 cut(s) 411, 952, 1316, 1742
AfiI CCNNNNNNNGG 3 cut(s) 377, 1136, 1449
AgsI TTSAA 5 cut(s) 757, 981, 1156, 1390, 1439
AjnI CCWGG 2 cut(s) 106, 414
AloI GAACNNNNNNTCC 4 cut(s) 9, 41, 729, 761
AluBI AGCT 6 cut(s) 236, 939, 1013, 1087, 1119, 1623
AluI AGCT 6 cut(s) 236, 939, 1013, 1087, 1119, 1623
Alw26I GTCTC 3 cut(s) 409, 440, 1581
AlwI GGATC 4 cut(s) 74, 966, 1230, 1426
Ama87I CYCGRG 1 cut(s) 777
AoxI GGCC 2 cut(s) 109, 1755
ApeKI GCWGC 2 cut(s) 1010, 1502
ApoI RAATTY 3 cut(s) 189, 976, 1177
Asp700I GAANNNNTTC 1 cut(s) 1177
AspLEI GCGC 3 cut(s) 120, 200, 202
AsuHPI GGTGA 4 cut(s) 332, 565, 586, 1495
AvaI CYCGRG 1 cut(s) 777
BaeGI GKGCMC 1 cut(s) 1073
BanI GGYRCC 2 cut(s) 380, 443
BarI GAAGNNNNNNTAC 2 cut(s) 1180, 1212
BbsI GAAGAC 1 cut(s) 1551
BbvI GCAGC 2 cut(s) 1022, 1514
BccI CCATC 4 cut(s) 728, 1063, 1088, 1612
BceAI ACGGC 4 cut(s) 193, 431, 475, 566
BciT130I CCWGG 2 cut(s) 108, 416
BciVI GTATCC 1 cut(s) 991
BcoDI GTCTC 3 cut(s) 409, 440, 1581
BfaI CTAG 4 cut(s) 1200, 1329, 1563, 1580
BfmI CTRYAG 6 cut(s) 30, 385, 488, 855, 1082, 1226
BfoI RGCGCY 1 cut(s) 121
BfuAI ACCTGC 1 cut(s) 1471
BfuI GTATCC 1 cut(s) 991
BisI GCNGC 5 cut(s) 379, 651, 1011, 1503, 1698
BlsI GCNGC 5 cut(s) 380, 652, 1012, 1504, 1699
BmcAI AGTACT 2 cut(s) 411, 1742
Bme1390I CCNGG 2 cut(s) 108, 416
BmeT110I CYCGRG 1 cut(s) 777
BmiI GGNNCC 5 cut(s) 382, 445, 517, 523, 831
BmrFI CCNGG 2 cut(s) 108, 416
BmrI ACTGGG 2 cut(s) 928, 940
BmsI GCATC 4 cut(s) 1201, 1579, 1671, 1759
BmuI ACTGGG 2 cut(s) 928, 940
BpiI GAAGAC 1 cut(s) 1551
BpmI CTGGAG 3 cut(s) 54, 1411, 1517
BpuEI CTTGAG 2 cut(s) 30, 98
Bsa29I ATCGAT 3 cut(s) 222, 243, 1607
BsaAI YACGTR 3 cut(s) 1314, 1373, 1383
BsaBI GATNNNNATC 1 cut(s) 249
BsaHI GRCGYC 1 cut(s) 162
BsaI GGTCTC 1 cut(s) 1581
BsaJI CCNNGG 4 cut(s) 582, 954, 1414, 1448
Bsc4I CCNNNNNNNGG 3 cut(s) 377, 1136, 1449
Bse1I ACTGG 3 cut(s) 923, 935, 1673
Bse3DI GCAATG 2 cut(s) 203, 1005
Bse8I GATNNNNATC 1 cut(s) 249
BseBI CCWGG 2 cut(s) 108, 416
BseCI ATCGAT 3 cut(s) 222, 243, 1607
BseDI CCNNGG 4 cut(s) 582, 954, 1414, 1448
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 3 cut(s) 377, 1136, 1449
BseMI GCAATG 2 cut(s) 203, 1005
BseMII CTCAG 2 cut(s) 246, 420
BseNI ACTGG 3 cut(s) 923, 935, 1673
BsePI GCGCGC 1 cut(s) 198
BseRI GAGGAG 1 cut(s) 584
BseSI GKGCMC 1 cut(s) 1073
BseXI GCAGC 2 cut(s) 1022, 1514
Bsh1236I CGCG 2 cut(s) 198, 200
Bsh1285I CGRYCG 1 cut(s) 433
BshFI GGCC 2 cut(s) 111, 1757
BshNI GGYRCC 2 cut(s) 380, 443
BshVI ATCGAT 3 cut(s) 222, 243, 1607
BsiEI CGRYCG 1 cut(s) 433
BsiHKCI CYCGRG 1 cut(s) 777
BsiSI CCGG 2 cut(s) 519, 525
BslFI GGGAC 3 cut(s) 149, 812, 947
BslI CCNNNNNNNGG 3 cut(s) 377, 1136, 1449
BsmAI GTCTC 3 cut(s) 409, 440, 1581
BsmBI CGTCTC 2 cut(s) 409, 440
BsmFI GGGAC 3 cut(s) 149, 812, 947
BsmI GAATGC 1 cut(s) 607
BsnI GGCC 2 cut(s) 111, 1757
Bso31I GGTCTC 1 cut(s) 1581
BsoBI CYCGRG 1 cut(s) 777
Bsp1286I GDGCHC 1 cut(s) 1073
Bsp143I GATC 5 cut(s) 34, 79, 958, 1222, 1418
BspANI GGCC 2 cut(s) 111, 1757
BspCNI CTCAG 2 cut(s) 245, 419
BspDI ATCGAT 3 cut(s) 222, 243, 1607
BspFNI CGCG 2 cut(s) 198, 200
BspLI GGNNCC 5 cut(s) 382, 445, 517, 523, 831
BspMAI CTGCAG 3 cut(s) 34, 492, 1230
BspMI ACCTGC 1 cut(s) 1471
BspPI GGATC 4 cut(s) 74, 966, 1230, 1426
BspT107I GGYRCC 2 cut(s) 380, 443
BspTNI GGTCTC 1 cut(s) 1581
BsrDI GCAATG 2 cut(s) 203, 1005
BsrI ACTGG 3 cut(s) 923, 935, 1673
BssECI CCNNGG 4 cut(s) 582, 954, 1414, 1448
BssHII GCGCGC 1 cut(s) 198
BssMI GATC 5 cut(s) 34, 79, 958, 1222, 1418
BssNAI GTATAC 1 cut(s) 540
BssNI GRCGYC 1 cut(s) 162
BssT1I CCWWGG 2 cut(s) 954, 1414
Bst1107I GTATAC 1 cut(s) 540
Bst2UI CCWGG 2 cut(s) 108, 416
Bst4CI ACNGT 5 cut(s) 434, 544, 811, 912, 1348
Bst6I CTCTTC 2 cut(s) 149, 1080
BstACI GRCGYC 1 cut(s) 162
BstAPI GCANNNNNTGC 1 cut(s) 1589
BstBAI YACGTR 3 cut(s) 1314, 1373, 1383
BstC8I GCNNGC 3 cut(s) 200, 492, 1569
BstDEI CTNAG 4 cut(s) 232, 406, 1703, 1744
BstDSI CCRYGG 1 cut(s) 582
BstENI CCTNNNNNAGG 1 cut(s) 1447
BstFNI CGCG 2 cut(s) 198, 200
BstH2I RGCGCY 1 cut(s) 121
BstHHI GCGC 3 cut(s) 120, 200, 202
BstKTI GATC 5 cut(s) 37, 82, 961, 1225, 1421
BstMAI GTCTC 3 cut(s) 409, 440, 1581
BstMBI GATC 5 cut(s) 34, 79, 958, 1222, 1418
BstMCI CGRYCG 1 cut(s) 433
BstMWI GCNNNNNNNGC 6 cut(s) 117, 387, 491, 650, 1511, 1589
BstNI CCWGG 2 cut(s) 108, 416
BstNSI RCATGY 1 cut(s) 1688
BstSCI CCNGG 2 cut(s) 106, 414
BstSFI CTRYAG 6 cut(s) 30, 385, 488, 855, 1082, 1226
BstSLI GKGCMC 1 cut(s) 1073
BstUI CGCG 2 cut(s) 198, 200
BstV1I GCAGC 2 cut(s) 1022, 1514
BstV2I GAAGAC 1 cut(s) 1551
BstX2I RGATCY 3 cut(s) 958, 1222, 1418
BstYI RGATCY 3 cut(s) 958, 1222, 1418
BstZ17I GTATAC 1 cut(s) 540
Bsu15I ATCGAT 3 cut(s) 222, 243, 1607
BsuI GTATCC 1 cut(s) 991
BsuRI GGCC 2 cut(s) 111, 1757
BsuTUI ATCGAT 3 cut(s) 222, 243, 1607
BtgI CCRYGG 1 cut(s) 582
BtgZI GCGATG 1 cut(s) 477
BtsIMutI CAGTG 1 cut(s) 908
BveI ACCTGC 1 cut(s) 1471
Cac8I GCNNGC 3 cut(s) 200, 492, 1569
CfoI GCGC 3 cut(s) 120, 200, 202
ClaI ATCGAT 3 cut(s) 222, 243, 1607
CseI GACGC 3 cut(s) 151, 391, 1553
Csp6I GTAC 4 cut(s) 410, 951, 1315, 1741
CspCI CAANNNNNGTGG 2 cut(s) 1396, 1431
CviAII CATG 8 cut(s) 91, 707, 893, 1167, 1217, 1249, 1401, 1685
CviQI GTAC 4 cut(s) 410, 951, 1315, 1741
DdeI CTNAG 4 cut(s) 232, 406, 1703, 1744
DpnI GATC 5 cut(s) 36, 81, 960, 1224, 1420
DpnII GATC 5 cut(s) 34, 79, 958, 1222, 1418
DraI TTTAAA 1 cut(s) 1279
DraIII CACNNNGTG 1 cut(s) 1042
DrdI GACNNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 437
Eam1104I CTCTTC 2 cut(s) 149, 1080
EarI CTCTTC 2 cut(s) 149, 1080
EciI GGCGGA 4 cut(s) 20, 543, 668, 1250
Eco130I CCWWGG 2 cut(s) 954, 1414
Eco147I AGGCCT 1 cut(s) 111
Eco31I GGTCTC 1 cut(s) 1581
Eco57I CTGAAG 1 cut(s) 1290
Eco88I CYCGRG 1 cut(s) 777
EcoNI CCTNNNNNAGG 1 cut(s) 1447
EcoRI GAATTC 1 cut(s) 1177
EcoRII CCWGG 2 cut(s) 106, 414
EcoT14I CCWWGG 2 cut(s) 954, 1414
EcoT22I ATGCAT 3 cut(s) 1380, 1686, 1774
ErhI CCWWGG 2 cut(s) 954, 1414
Esp3I CGTCTC 2 cut(s) 409, 440
FaeI CATG 8 cut(s) 94, 710, 896, 1170, 1220, 1252, 1404, 1688
FalI AAGNNNNNCTT 2 cut(s) 1727, 1759
FaqI GGGAC 3 cut(s) 149, 812, 947
FatI CATG 8 cut(s) 90, 706, 892, 1166, 1216, 1248, 1400, 1684
FblI GTMKAC 1 cut(s) 539
Fnu4HI GCNGC 5 cut(s) 379, 651, 1011, 1503, 1698
Fsp4HI GCNGC 5 cut(s) 379, 651, 1011, 1503, 1698
FspBI CTAG 4 cut(s) 1200, 1329, 1563, 1580
GlaI GCGC 3 cut(s) 119, 199, 201
GluI GCNGC 5 cut(s) 379, 651, 1011, 1503, 1698
GsuI CTGGAG 3 cut(s) 54, 1411, 1517
HaeII RGCGCY 1 cut(s) 121
HaeIII GGCC 2 cut(s) 111, 1757
HapII CCGG 2 cut(s) 519, 525
HgaI GACGC 3 cut(s) 151, 391, 1553
HhaI GCGC 3 cut(s) 120, 200, 202
Hin1I GRCGYC 1 cut(s) 162
Hin1II CATG 8 cut(s) 94, 710, 896, 1170, 1220, 1252, 1404, 1688
Hin6I GCGC 3 cut(s) 118, 198, 200
HinP1I GCGC 3 cut(s) 118, 198, 200
HpaII CCGG 2 cut(s) 519, 525
HphI GGTGA 4 cut(s) 332, 565, 586, 1495
Hpy166II GTNNAC 2 cut(s) 540, 556
Hpy188I TCNGA 7 cut(s) 39, 424, 430, 628, 807, 1183, 1285
Hpy188III TCNNGA 7 cut(s) 71, 83, 323, 779, 1091, 1428, 1496
Hpy8I GTNNAC 2 cut(s) 540, 556
Hpy99I CGWCG 4 cut(s) 188, 293, 443, 461
HpyAV CCTTC 8 cut(s) 160, 640, 682, 689, 1206, 1225, 1747, 1759
HpyCH4III ACNGT 5 cut(s) 434, 544, 811, 912, 1348
HpyCH4IV ACGT 3 cut(s) 1313, 1372, 1382
HpyF10VI GCNNNNNNNGC 6 cut(s) 117, 387, 491, 650, 1511, 1589
HpyF3I CTNAG 4 cut(s) 232, 406, 1703, 1744
HpySE526I ACGT 3 cut(s) 1313, 1372, 1382
Hsp92I GRCGYC 1 cut(s) 162
Hsp92II CATG 8 cut(s) 94, 710, 896, 1170, 1220, 1252, 1404, 1688
HspAI GCGC 3 cut(s) 118, 198, 200
Kzo9I GATC 5 cut(s) 34, 79, 958, 1222, 1418
LmnI GCTCC 3 cut(s) 521, 527, 835
Lsp1109I GCAGC 2 cut(s) 1022, 1514
LweI GCATC 4 cut(s) 1201, 1579, 1671, 1759
MaeI CTAG 4 cut(s) 1200, 1329, 1563, 1580
MaeII ACGT 3 cut(s) 1313, 1372, 1382
MaeIII GTNAC 1 cut(s) 1368
MalI GATC 5 cut(s) 36, 81, 960, 1224, 1420
MboI GATC 5 cut(s) 34, 79, 958, 1222, 1418
MflI RGATCY 3 cut(s) 958, 1222, 1418
MhlI GDGCHC 1 cut(s) 1073
MluCI AATT 7 cut(s) 189, 353, 757, 976, 1177, 1209, 1355
MlyI GAGTC 3 cut(s) 293, 352, 413
MmeI TCCRAC 1 cut(s) 453
Mph1103I ATGCAT 3 cut(s) 1380, 1686, 1774
MroXI GAANNNNTTC 1 cut(s) 1177
MseI TTAA 3 cut(s) 170, 666, 1278
MslI CAYNNNNRTG 2 cut(s) 869, 1401
MspA1I CMGCKG 2 cut(s) 236, 1013
MspI CCGG 2 cut(s) 519, 525
MspR9I CCNGG 2 cut(s) 108, 416
Mva1269I GAATGC 1 cut(s) 607
MvaI CCWGG 2 cut(s) 108, 416
MvnI CGCG 2 cut(s) 198, 200
MwoI GCNNNNNNNGC 6 cut(s) 117, 387, 491, 650, 1511, 1589
NdeII GATC 5 cut(s) 34, 79, 958, 1222, 1418
NlaIII CATG 8 cut(s) 94, 710, 896, 1170, 1220, 1252, 1404, 1688
NlaIV GGNNCC 5 cut(s) 382, 445, 517, 523, 831
NmeAIII GCCGAG 1 cut(s) 1473
NmuCI GTSAC 1 cut(s) 1368
NsiI ATGCAT 3 cut(s) 1380, 1686, 1774
NspI RCATGY 1 cut(s) 1688
PaeR7I CTCGAG 1 cut(s) 777
PaqCI CACCTGC 1 cut(s) 1471
PauI GCGCGC 1 cut(s) 198
PceI AGGCCT 1 cut(s) 111
PcsI WCGNNNNNNNCGW 2 cut(s) 294, 444
PctI GAATGC 1 cut(s) 607
PdmI GAANNNNTTC 1 cut(s) 1177
PfeI GAWTC 8 cut(s) 224, 245, 326, 425, 610, 703, 820, 1156
PfoI TCCNGGA 1 cut(s) 414
PkrI GCNGC 5 cut(s) 380, 652, 1012, 1504, 1699
PleI GAGTC 3 cut(s) 293, 352, 413
PpsI GAGTC 3 cut(s) 293, 352, 413
Ppu21I YACGTR 3 cut(s) 1314, 1373, 1383
PsiI TTATAA 1 cut(s) 1460
Psp6I CCWGG 2 cut(s) 106, 414
PspGI CCWGG 2 cut(s) 106, 414
PspN4I GGNNCC 5 cut(s) 382, 445, 517, 523, 831
PstI CTGCAG 3 cut(s) 34, 492, 1230
PsuI RGATCY 3 cut(s) 958, 1222, 1418
PteI GCGCGC 1 cut(s) 198
PvuII CAGCTG 2 cut(s) 236, 1013
RsaI GTAC 4 cut(s) 411, 952, 1316, 1742
RsaNI GTAC 4 cut(s) 410, 951, 1315, 1741
RseI CAYNNNNRTG 2 cut(s) 869, 1401
SaqAI TTAA 3 cut(s) 170, 666, 1278
SatI GCNGC 5 cut(s) 379, 651, 1011, 1503, 1698
Sau3AI GATC 5 cut(s) 34, 79, 958, 1222, 1418
ScaI AGTACT 2 cut(s) 411, 1742
SchI GAGTC 3 cut(s) 293, 352, 413
ScrFI CCNGG 2 cut(s) 108, 416
SduI GDGCHC 1 cut(s) 1073
SfaNI GCATC 4 cut(s) 1201, 1579, 1671, 1759
SfcI CTRYAG 6 cut(s) 30, 385, 488, 855, 1082, 1226
Sfr274I CTCGAG 1 cut(s) 777
SlaI CTCGAG 1 cut(s) 777
SmiMI CAYNNNNRTG 2 cut(s) 869, 1401
SmlI CTYRAG 3 cut(s) 45, 113, 777
SmoI CTYRAG 3 cut(s) 45, 113, 777
Sse9I AATT 7 cut(s) 189, 353, 757, 976, 1177, 1209, 1355
SseBI AGGCCT 1 cut(s) 111
SspMI CTAG 4 cut(s) 1200, 1329, 1563, 1580
StuI AGGCCT 1 cut(s) 111
StyD4I CCNGG 2 cut(s) 106, 414
StyI CCWWGG 2 cut(s) 954, 1414
TaaI ACNGT 5 cut(s) 434, 544, 811, 912, 1348
TaiI ACGT 3 cut(s) 1316, 1375, 1385
TaqII GACCGA 2 cut(s) 365, 1606
TasI AATT 7 cut(s) 189, 353, 757, 976, 1177, 1209, 1355
TatI WGTACW 2 cut(s) 409, 1740
TauI GCSGC 3 cut(s) 381, 653, 1700
TfiI GAWTC 8 cut(s) 224, 245, 326, 425, 610, 703, 820, 1156
Tru1I TTAA 3 cut(s) 170, 666, 1278
Tru9I TTAA 3 cut(s) 170, 666, 1278
TscAI CASTG 1 cut(s) 915
TseFI GTSAC 1 cut(s) 1368
TseI GCWGC 2 cut(s) 1010, 1502
Tsp45I GTSAC 1 cut(s) 1368
TspDTI ATGAA 9 cut(s) 75, 142, 695, 863, 1237, 1385, 1389, 1589, 1778
TspGWI ACGGA 2 cut(s) 172, 255
TspRI CASTG 1 cut(s) 915
XagI CCTNNNNNAGG 1 cut(s) 1447
XapI RAATTY 3 cut(s) 189, 976, 1177
XceI RCATGY 1 cut(s) 1688
XcmI CCANNNNNNNNNTGG 1 cut(s) 319
XhoI CTCGAG 1 cut(s) 777
XmiI GTMKAC 1 cut(s) 539
XmnI GAANNNNTTC 1 cut(s) 1177
XspI CTAG 4 cut(s) 1200, 1329, 1563, 1580
ZrmI AGTACT 2 cut(s) 411, 1742
Zsp2I ATGCAT 3 cut(s) 1380, 1686, 1774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.