Rh2AG373100

Protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
55474458 .. 55477870
3413 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG373100.1

Sequence Viewer

Length: 2214 bp
ATGACCGGCGATGCCACTTTTTCTCCGACCAACCGGGCCTTGTCATTCACCATAGAAGAAGGTTCTCAAAACAGCGAGCAACTTCTGGAGGATGAAAACAATGATCTTGGGAATGATTGCGAGCAATTGTTTGAGATTGATGGGAATGAGCCTGAAAGTGAAAGAGATGATACAAGTGATCAGTTTTTTGAGATTGATAGCAATGACAATGAAAATGACAGAGGTGATCTAAATGAACAGCTATTTGATATACAAGGCAATGACCATGAGATGAGCAGGAATGATGATACTGTAATTGATGGTCAAAATGGTGGATCTCAAGAAAAGGTCTATCCCCAACCAGTTGTGGGTTTGGAGTTTGATTCATATGATGATGCTTACAATTATTATAATTGCTATGCTAAGGAACTTGGATTTGCCATCAGGGTGAAATCTTCATGGACAAAGCGTAACAGCAAAGAGAAGCGGGGTGCAGTTCTATGTTGCAACTGTGAGGGTTTTAAAACAATCAAAGAAGCAAACAGTCGCAAGAAAGAAACGAGAACTGGTTGTCTAGCAATGATAAGGTTGAGACTAGTGGAATCTAACAGATGGAGGGTGGATGAAGTCAAGCTTGAACACAACCATTTATTCGATCCTGAAAGAGCTCAGAACTCCAAGTCCCACAAGAAGATGGATTCTGGGGCTAAAAGAAAGATGGAGCCAACCCTTGATGTTGAAGTACGCACGATCAAGTTATATCGCACACCTGGCGCAGACATAGTTGGTTATGGAAGCTCGAACTCCTATGAAGGAGAAAGTAACAGCTATGTTGATGTGTCCAAGAGATTGAAACTCAAACAAGGAGATGCAAGAGCAATTTATAAATATTTCAGTCGGGTACAGCTAACTGATCCTAATTTTTTCTATGTGAATGATCTCAGTGATGAAGGGCATTTGAGGAATGTGTTTTGGATCGATTCTAGGTCTAGAGCTGCATACAGTTACTTTGGTGATGTAGTAGCATTTGACACTACATGCTTGTCAAACAATTATGAGATTCCGCTTGTTGCATTTGTTGGAGTAAATCACCATGGGCAGACAATTTTGCTTGGTTGTGGTTTGCTTGCTGATGAGACAGTGGAAACATATATATGGTTATTTAGGGCATGGCTTACCTGTATGTCTGGTCGCCCTCCACAGACTATCATCACAAACCAGTGCAAGGCCATGCACAGTGCTATAGTAGAGGTATTTCCTAGGGCTCATCATCGTCTTTGTACTTCACATGTAGTGCAAAGTATTCTTGAGAATATGGAAGCACTGCAAGACTACGAGGCGTTTCAGATGATTTTGAGTAGAACTGTATACGACTCATTAAAAGCGGATGAGTTTGAATCGGGGTGGGAAGATATGATCCAGAGATTTGGAATTAGGAATCATGAATTTCTTCAAACTTTGTATGAAGATCGTGAACGTTGGGGTCCAGCTTACTCAAAGGACACCTGTTTTGCTGGAATGCCCGATTTTCAAAATGGAGAGTCCACAAGGCCATATTTTGATGGTCACATTCATCAAAGAACTTCTTTGGAAGAGTTTTTCGAGGTTTATGATTTTGTTTTGGAAAATAAGCATCAGGAAGAAGCTCGTAATGATTTAGTGTCCAGAGACTTGAACCCCATATTGAGAACAAGATGCTATTATGAGTTGCAGCTCTCCAAGTTCTACACAAAAGATGTATTCAGAAAGTTTCAACATGAGGTTGCAATGATGTCTTCCTGTTTTAGCATTACTCAAGTTCATACAAATGGACCAATAGTGACATACATGATCAAAGAACGTGAAGGGGAGGAAATTTTGAGGGGTGTTAGGAACTTTGAAGTTATGTATGACAAAGCGGGAGCAGAAGTTCGTTGCATGTGCAGTTGCCTTAATTTAAATGGGTACTTATGTCGACATGCCTTGTGTATCCTCAACTATAATGGTGTGGAAGAGATACCGTTTCAGTATATCTTTTCACGATGGAGGAAAGACTTTAAGCGCTTGTATGTACCAGATCTTGGCTGCAACAATGTTGATATCACGAACCCAGTTCAGTGGTTTGATCATTTGTATAGAAGAGCAATGCAAGTTGTTCAGGAAGGGATGATTTCTCAGGATCATTATATGGTATCTTGGCAGGCATTTAAGGAGTCTTTGAATAAGGTCCGTCTTGTAGCAGACAAGCAGGTATAG

Protein Analysis

737

Amino Acids

85.62

Weight (kDa)

5.2

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 128 - 211 4.7e-24 FAR1 DNA-binding domain
MULE PF10551 333 - 426 3.1e-30 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000252)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80010
fragaria_vesca FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 390, 864
Acc36I ACCTGC 1 cut(s) 2197
AccB7I CCANNNNNTGG 1 cut(s) 2039
AccI GTMKAC 2 cut(s) 1347, 1933
AciI CCGC 4 cut(s) 466, 1043, 1364, 1877
AclI AACGTT 1 cut(s) 1456
AclWI GGATC 6 cut(s) 322, 629, 887, 962, 1390, 2145
AcsI RAATTY 2 cut(s) 1424, 1833
AfaI GTAC 5 cut(s) 723, 882, 1261, 1925, 2031
AfeI AGCGCT 1 cut(s) 2021
AfiI CCNNNNNNNGG 3 cut(s) 347, 1204, 2039
AflIII ACRYGT 1 cut(s) 1267
AhlI ACTAGT 1 cut(s) 574
AjnI CCWGG 1 cut(s) 748
AloI GAACNNNNNNTCC 4 cut(s) 644, 676, 1872, 1904
Alw21I GWGCWC 1 cut(s) 649
Alw26I GTCTC 3 cut(s) 565, 1109, 1641
AlwI GGATC 6 cut(s) 322, 629, 887, 962, 1390, 2145
Aor51HI AGCGCT 1 cut(s) 2021
AoxI GGCC 3 cut(s) 36, 1206, 1529
ApeKI GCWGC 3 cut(s) 974, 1690, 2043
ApoI RAATTY 2 cut(s) 1424, 1833
ArsI GACNNNNNNTTYG 2 cut(s) 1472, 1504
Asp700I GAANNNNTTC 1 cut(s) 1428
AspA2I CCTAGG 1 cut(s) 1238
AspLEI GCGC 2 cut(s) 755, 2022
AspS9I GGNCC 4 cut(s) 36, 1463, 1790, 2185
AsuC2I CCSGG 1 cut(s) 35
AsuHPI GGTGA 5 cut(s) 40, 236, 439, 1004, 1061
AvaII GGWCC 3 cut(s) 1463, 1790, 2185
AvrII CCTAGG 1 cut(s) 1238
BaeI ACNNNNGTAYC 2 cut(s) 1915, 1948
BanII GRGCYC 2 cut(s) 649, 1246
BbsI GAAGAC 1 cut(s) 1746
Bbv12I GWGCWC 1 cut(s) 649
BbvI GCAGC 3 cut(s) 961, 1702, 2030
BccI CCATC 8 cut(s) 134, 293, 428, 585, 667, 691, 1535, 1995
BciT130I CCWGG 1 cut(s) 750
BciVI GTATCC 1 cut(s) 1958
BclI TGATCA 3 cut(s) 178, 1809, 2083
BcnI CCSGG 1 cut(s) 35
BcoDI GTCTC 3 cut(s) 565, 1109, 1641
BcuI ACTAGT 1 cut(s) 574
BfaI CTAG 5 cut(s) 554, 575, 963, 969, 1239
BfmI CTRYAG 1 cut(s) 1221
BfoI RGCGCY 1 cut(s) 2023
BfuAI ACCTGC 1 cut(s) 2197
BfuI GTATCC 1 cut(s) 1958
BglII AGATCT 1 cut(s) 2035
BisI GCNGC 3 cut(s) 975, 1691, 2044
BlnI CCTAGG 1 cut(s) 1238
BlsI GCNGC 3 cut(s) 976, 1692, 2045
Bme1390I CCNGG 2 cut(s) 35, 750
Bme18I GGWCC 3 cut(s) 1463, 1790, 2185
BmgT120I GGNCC 4 cut(s) 36, 1463, 1790, 2185
BmiI GGNNCC 2 cut(s) 702, 1464
BmrFI CCNGG 2 cut(s) 35, 750
BmrI ACTGGG 1 cut(s) 2063
BmsI GCATC 4 cut(s) 364, 838, 1621, 1664
BmuI ACTGGG 1 cut(s) 2063
BpiI GAAGAC 1 cut(s) 1746
BpmI CTGGAG 1 cut(s) 107
Bpu10I CCTNAGC 1 cut(s) 402
BpuEI CTTGAG 3 cut(s) 303, 1307, 1758
BpuMI CCSGG 1 cut(s) 35
Bsa29I ATCGAT 1 cut(s) 957
BsaJI CCNNGG 2 cut(s) 1072, 1238
BsaXI ACNNNNNCTCC 4 cut(s) 7, 37, 1872, 1902
Bsc4I CCNNNNNNNGG 3 cut(s) 347, 1204, 2039
Bse118I RCCGGY 1 cut(s) 5
Bse1I ACTGG 4 cut(s) 341, 550, 1198, 2069
Bse3DI GCAATG 5 cut(s) 208, 265, 564, 1752, 2109
BseBI CCWGG 1 cut(s) 750
BseCI ATCGAT 1 cut(s) 957
BseDI CCNNGG 2 cut(s) 1072, 1238
BseGI GGATG 4 cut(s) 97, 607, 1372, 2130
BseLI CCNNNNNNNGG 3 cut(s) 347, 1204, 2039
BseMI GCAATG 5 cut(s) 208, 265, 564, 1752, 2109
BseMII CTCAG 3 cut(s) 662, 934, 2147
BseNI ACTGG 4 cut(s) 341, 550, 1198, 2069
BseXI GCAGC 3 cut(s) 961, 1702, 2030
BsgI GTGCAG 2 cut(s) 492, 1921
BshFI GGCC 3 cut(s) 38, 1208, 1531
BshVI ATCGAT 1 cut(s) 957
BsiHKAI GWGCWC 1 cut(s) 649
BsiSI CCGG 2 cut(s) 6, 34
BslFI GGGAC 1 cut(s) 646
BslI CCNNNNNNNGG 3 cut(s) 347, 1204, 2039
BsmAI GTCTC 3 cut(s) 565, 1109, 1641
BsmFI GGGAC 1 cut(s) 646
BsmI GAATGC 1 cut(s) 1503
BsnI GGCC 3 cut(s) 38, 1208, 1531
Bsp1286I GDGCHC 2 cut(s) 649, 1246
Bsp19I CCATGG 1 cut(s) 1072
BspACI CCGC 4 cut(s) 466, 1043, 1364, 1877
BspANI GGCC 3 cut(s) 38, 1208, 1531
BspCNI CTCAG 3 cut(s) 661, 933, 2146
BspDI ATCGAT 1 cut(s) 957
BspHI TCATGA 1 cut(s) 1420
BspLI GGNNCC 2 cut(s) 702, 1464
BspMI ACCTGC 1 cut(s) 2197
BspPI GGATC 6 cut(s) 322, 629, 887, 962, 1390, 2145
BspQI GCTCTTC 1 cut(s) 2092
BsrDI GCAATG 5 cut(s) 208, 265, 564, 1752, 2109
BsrFI RCCGGY 1 cut(s) 5
BsrI ACTGG 4 cut(s) 341, 550, 1198, 2069
BssAI RCCGGY 1 cut(s) 5
BssECI CCNNGG 2 cut(s) 1072, 1238
BssNAI GTATAC 1 cut(s) 1348
BssT1I CCWWGG 2 cut(s) 1072, 1238
Bst1107I GTATAC 1 cut(s) 1348
Bst2UI CCWGG 1 cut(s) 750
Bst4CI ACNGT 8 cut(s) 292, 491, 524, 983, 1120, 1217, 1345, 1980
Bst6I CTCTTC 3 cut(s) 1566, 1965, 2092
BstC8I GCNNGC 4 cut(s) 77, 122, 1107, 2160
BstDEI CTNAG 4 cut(s) 402, 648, 920, 2133
BstDSI CCRYGG 1 cut(s) 1072
BstF5I GGATG 4 cut(s) 97, 607, 1372, 2130
BstH2I RGCGCY 1 cut(s) 2023
BstHHI GCGC 2 cut(s) 755, 2022
BstMAI GTCTC 3 cut(s) 565, 1109, 1641
BstMWI GCNNNNNNNGC 1 cut(s) 750
BstNI CCWGG 1 cut(s) 750
BstNSI RCATGY 4 cut(s) 1020, 1271, 1900, 1940
BstSCI CCNGG 2 cut(s) 33, 748
BstSFI CTRYAG 1 cut(s) 1221
BstV1I GCAGC 3 cut(s) 961, 1702, 2030
BstV2I GAAGAC 1 cut(s) 1746
BstX2I RGATCY 2 cut(s) 314, 2035
BstXI CCANNNNNNTGG 2 cut(s) 1406, 2076
BstYI RGATCY 2 cut(s) 314, 2035
BstZ17I GTATAC 1 cut(s) 1348
Bsu15I ATCGAT 1 cut(s) 957
BsuI GTATCC 1 cut(s) 1958
BsuRI GGCC 3 cut(s) 38, 1208, 1531
BsuTUI ATCGAT 1 cut(s) 957
BtgI CCRYGG 1 cut(s) 1072
BtgZI GCGATG 1 cut(s) 24
BtsCI GGATG 4 cut(s) 97, 607, 1372, 2130
BtsI GCAGTG 1 cut(s) 1301
BtsIMutI CAGTG 6 cut(s) 928, 1125, 1205, 1222, 1301, 2081
BveI ACCTGC 1 cut(s) 2197
Cac8I GCNNGC 4 cut(s) 77, 122, 1107, 2160
CciI TCATGA 1 cut(s) 1420
CfoI GCGC 2 cut(s) 755, 2022
Cfr10I RCCGGY 1 cut(s) 5
Cfr13I GGNCC 4 cut(s) 36, 1463, 1790, 2185
ClaI ATCGAT 1 cut(s) 957
Csp6I GTAC 5 cut(s) 722, 881, 1260, 1924, 2030
CviQI GTAC 5 cut(s) 722, 881, 1260, 1924, 2030
DdeI CTNAG 4 cut(s) 402, 648, 920, 2133
DraI TTTAAA 2 cut(s) 502, 1917
Eam1104I CTCTTC 3 cut(s) 1566, 1965, 2092
EarI CTCTTC 3 cut(s) 1566, 1965, 2092
Ecl136II GAGCTC 1 cut(s) 647
Eco130I CCWWGG 2 cut(s) 1072, 1238
Eco24I GRGCYC 2 cut(s) 649, 1246
Eco32I GATATC 1 cut(s) 2059
Eco47I GGWCC 3 cut(s) 1463, 1790, 2185
Eco47III AGCGCT 1 cut(s) 2021
Eco53kI GAGCTC 1 cut(s) 647
EcoICRI GAGCTC 1 cut(s) 647
EcoRII CCWGG 1 cut(s) 748
EcoRV GATATC 1 cut(s) 2059
EcoT14I CCWWGG 2 cut(s) 1072, 1238
EcoT38I GRGCYC 2 cut(s) 649, 1246
ErhI CCWWGG 2 cut(s) 1072, 1238
FalI AAGNNNNNCTT 4 cut(s) 597, 629, 1549, 1581
FaqI GGGAC 1 cut(s) 646
FauI CCCGC 2 cut(s) 459, 1870
FauNDI CATATG 1 cut(s) 367
FbaI TGATCA 3 cut(s) 178, 1809, 2083
FblI GTMKAC 2 cut(s) 1347, 1933
Fnu4HI GCNGC 3 cut(s) 975, 1691, 2044
FokI GGATG 4 cut(s) 104, 614, 1379, 2137
FriOI GRGCYC 2 cut(s) 649, 1246
Fsp4HI GCNGC 3 cut(s) 975, 1691, 2044
FspBI CTAG 5 cut(s) 554, 575, 963, 969, 1239
GlaI GCGC 2 cut(s) 754, 2021
GluI GCNGC 3 cut(s) 975, 1691, 2044
GsuI CTGGAG 1 cut(s) 107
HaeII RGCGCY 1 cut(s) 2023
HaeIII GGCC 3 cut(s) 38, 1208, 1531
HapII CCGG 2 cut(s) 6, 34
HhaI GCGC 2 cut(s) 755, 2022
Hin6I GCGC 2 cut(s) 753, 2020
HinP1I GCGC 2 cut(s) 753, 2020
HincII GTYRAC 1 cut(s) 1934
HindII GTYRAC 1 cut(s) 1934
HindIII AAGCTT 1 cut(s) 611
HpaII CCGG 2 cut(s) 6, 34
HphI GGTGA 5 cut(s) 40, 236, 439, 1004, 1061
Hpy166II GTNNAC 4 cut(s) 1348, 1454, 1524, 1934
Hpy188I TCNGA 4 cut(s) 27, 651, 1326, 1724
Hpy8I GTNNAC 4 cut(s) 1348, 1454, 1524, 1934
HpyAV CCTTC 5 cut(s) 53, 785, 923, 1817, 2114
HpyCH4III ACNGT 8 cut(s) 292, 491, 524, 983, 1120, 1217, 1345, 1980
HpyCH4IV ACGT 2 cut(s) 1456, 1819
HpyF10VI GCNNNNNNNGC 1 cut(s) 750
HpyF3I CTNAG 4 cut(s) 402, 648, 920, 2133
HpySE526I ACGT 2 cut(s) 1456, 1819
HspAI GCGC 2 cut(s) 753, 2020
Ksp22I TGATCA 3 cut(s) 178, 1809, 2083
LguI GCTCTTC 1 cut(s) 2092
LmnI GCTCC 2 cut(s) 700, 1880
Lsp1109I GCAGC 3 cut(s) 961, 1702, 2030
LweI GCATC 4 cut(s) 364, 838, 1621, 1664
MaeI CTAG 5 cut(s) 554, 575, 963, 969, 1239
MaeII ACGT 2 cut(s) 1456, 1819
MaeIII GTNAC 5 cut(s) 449, 800, 983, 1544, 1798
MfeI CAATTG 1 cut(s) 125
MflI RGATCY 2 cut(s) 314, 2035
MhlI GDGCHC 2 cut(s) 649, 1246
MlyI GAGTC 3 cut(s) 1346, 1529, 2180
MmeI TCCRAC 2 cut(s) 50, 1039
MroXI GAANNNNTTC 1 cut(s) 1428
MseI TTAA 6 cut(s) 501, 1358, 1911, 1916, 2016, 2166
MslI CAYNNNNRTG 3 cut(s) 425, 1132, 1785
MspI CCGG 2 cut(s) 6, 34
MspR9I CCNGG 2 cut(s) 35, 750
MunI CAATTG 1 cut(s) 125
Mva1269I GAATGC 1 cut(s) 1503
MvaI CCWGG 1 cut(s) 750
MwoI GCNNNNNNNGC 1 cut(s) 750
NciI CCSGG 1 cut(s) 35
NcoI CCATGG 1 cut(s) 1072
NdeI CATATG 1 cut(s) 367
NlaIV GGNNCC 2 cut(s) 702, 1464
NmuCI GTSAC 2 cut(s) 1544, 1798
NspI RCATGY 4 cut(s) 1020, 1271, 1900, 1940
PagI TCATGA 1 cut(s) 1420
PciI ACATGT 1 cut(s) 1267
PciSI GCTCTTC 1 cut(s) 2092
PctI GAATGC 1 cut(s) 1503
PdmI GAANNNNTTC 1 cut(s) 1428
PfeI GAWTC 7 cut(s) 362, 581, 677, 959, 1039, 1376, 1417
PflMI CCANNNNNTGG 1 cut(s) 2039
PkrI GCNGC 3 cut(s) 976, 1692, 2045
PleI GAGTC 3 cut(s) 1346, 1528, 2179
PpsI GAGTC 3 cut(s) 1346, 1528, 2179
PscI ACATGT 1 cut(s) 1267
PsiI TTATAA 2 cut(s) 390, 864
Psp124BI GAGCTC 1 cut(s) 649
Psp1406I AACGTT 1 cut(s) 1456
Psp6I CCWGG 1 cut(s) 748
PspGI CCWGG 1 cut(s) 748
PspN4I GGNNCC 2 cut(s) 702, 1464
PspPI GGNCC 4 cut(s) 36, 1463, 1790, 2185
PsuI RGATCY 2 cut(s) 314, 2035
RsaI GTAC 5 cut(s) 723, 882, 1261, 1925, 2031
RsaNI GTAC 5 cut(s) 722, 881, 1260, 1924, 2030
RseI CAYNNNNRTG 3 cut(s) 425, 1132, 1785
SacI GAGCTC 1 cut(s) 649
SalI GTCGAC 1 cut(s) 1932
SapI GCTCTTC 1 cut(s) 2092
SaqAI TTAA 6 cut(s) 501, 1358, 1911, 1916, 2016, 2166
SatI GCNGC 3 cut(s) 975, 1691, 2044
Sau96I GGNCC 4 cut(s) 36, 1463, 1790, 2185
SchI GAGTC 3 cut(s) 1346, 1529, 2180
ScrFI CCNGG 2 cut(s) 35, 750
SduI GDGCHC 2 cut(s) 649, 1246
SfaNI GCATC 4 cut(s) 364, 838, 1621, 1664
SfcI CTRYAG 1 cut(s) 1221
SinI GGWCC 3 cut(s) 1463, 1790, 2185
SmiI ATTTAAAT 1 cut(s) 1917
SmiMI CAYNNNNRTG 3 cut(s) 425, 1132, 1785
SmlI CTYRAG 3 cut(s) 318, 1286, 1773
SmoI CTYRAG 3 cut(s) 318, 1286, 1773
SpeI ACTAGT 1 cut(s) 574
SsiI CCGC 4 cut(s) 466, 1043, 1364, 1877
SspI AATATT 1 cut(s) 869
SspMI CTAG 5 cut(s) 554, 575, 963, 969, 1239
SstI GAGCTC 1 cut(s) 649
StyD4I CCNGG 2 cut(s) 33, 748
StyI CCWWGG 2 cut(s) 1072, 1238
SwaI ATTTAAAT 1 cut(s) 1917
TaaI ACNGT 8 cut(s) 292, 491, 524, 983, 1120, 1217, 1345, 1980
TaiI ACGT 2 cut(s) 1459, 1822
TaqI TCGA 5 cut(s) 633, 779, 957, 1581, 1933
TatI WGTACW 1 cut(s) 1259
TfiI GAWTC 7 cut(s) 362, 581, 677, 959, 1039, 1376, 1417
Tru1I TTAA 6 cut(s) 501, 1358, 1911, 1916, 2016, 2166
Tru9I TTAA 6 cut(s) 501, 1358, 1911, 1916, 2016, 2166
TscAI CASTG 6 cut(s) 928, 1125, 1205, 1222, 1308, 2081
TseFI GTSAC 2 cut(s) 1544, 1798
TseI GCWGC 3 cut(s) 974, 1690, 2043
Tsp45I GTSAC 2 cut(s) 1544, 1798
TspGWI ACGGA 1 cut(s) 2177
TspRI CASTG 6 cut(s) 928, 1125, 1205, 1222, 1308, 2081
Van91I CCANNNNNTGG 1 cut(s) 2039
VpaK11BI GGWCC 3 cut(s) 1463, 1790, 2185
XapI RAATTY 2 cut(s) 1424, 1833
XbaI TCTAGA 1 cut(s) 968
XceI RCATGY 4 cut(s) 1020, 1271, 1900, 1940
XmaJI CCTAGG 1 cut(s) 1238
XmiI GTMKAC 2 cut(s) 1347, 1933
XmnI GAANNNNTTC 1 cut(s) 1428
XspI CTAG 5 cut(s) 554, 575, 963, 969, 1239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.