Rroxscaffold_7G00170310

Protein FAR1-RELATED SEQUENCE 6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000252
Physical Location & Seq
Reverse (-)
10746956 .. 10749072
2117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00170310.1

Sequence Viewer

Length: 2004 bp
ATGGAAGAAGTTTGTCTCAATAGTGAGCCAGTGTTTGATGAAGGCGATGAGTATGACTTGGAGGGAGGGCATGATGTTGGAATAGGGGAAACACAAAGTAAACAGGTCCCCCCACAACCTACTGTCGGTTTGGAGTTTGACTCTTTTGACGAAGCCTATGATTTCTACAATGTCTATGGGAAAGAACAGGGATTTGGCATCAGAGTGAGCAATTCATGGTTCAGGTCAAAGAGAAAAGAGCGGTATAGAGCAAAATTAAGTTGCAGCAGTGCAGGTTTCAAGAAAAAGAGTGAAGCCAACAATCCGAGACCTGAGACAAGAACTGGTTGTCCAGCAATGATAGTTATCAAGCTGGTGGACTCCCAAAAGTGGAGAATAGTTGAATTAGAGCTTCAACACAACCATCAGGTGAGTCCACAGATCAAAAGGTTTTACAAGTCGCATAAGAAAATGATCATTGCTGCCAAAAATGCACAACCACAGCCAAATCCTGTTACAGAATTTCATACTATCAAGCTGTATCGAACACCTGTTATGGATGTTGGGTGCAACGGATGCTCAACTTTAAGTGAAACTGAAGGTTTAAATCCTATTGATCACTCTAAGCACTTGCAACTTAGAGAAGGAGATGCTCATGCAGTTTACAACTACTTTTGTAGAATGAAATTGACAAATCCTAATTTTTATTATTTGATGGATCTAGATGATGATGGACGTCTGAGGAATGTGTTTTGGGCTGATGCCAGGGCCAGGGCTGTGTACGGCTACTTCTGTGACACTGTAGCCATAGACACAACGTGCTTGGCAAACAAATATGAACTGCCCCTGATTTCATTTGTTGGTGTAAACCATCATGGACAATCCGTGCTGTTGGGCTGTGGGTTCCTTGGGGTTGAGTCAGTGGATTGTTATGTTTGGATGCTCCGTGCATGGCTGAAATGCATGCTAGGGCGCCCTCCACAGGTTTTCATTACTGACCAATGCAAACCATTGCAAATTGCAGTGTCTGAGGTGATCCCAGAGGCTCGCCATTGCTATTGTTTGTCATATATCATGCAGAGAGTTCCAGAGAAGTTGGGAGGACTGAAGGGATATGAAGCAATCAAAAGACACTTGCAGAAATCAATCTATGATTCCTTGAAAATAGCTGAGTTTGAAACTTCCTGGGCTGAAATGATCAAGCGGCATGAACTGGGGAATAATAAATGGCTTCAGACATTGTATGAGGATCGGCAGAACTGGGTTCCAGTTTATTTAAAAGACACATTTTTTGCGGGAATGATCCCTATCCGCGAAAATGAGAGCTTGCCTGCATTTTTTGATGGTTATGTACATAAACATACGTCTTTCAAGGAGTTCGTCGATAAGTATGACCTAGCTCTACATAGGAAGCGCATGAAAGAGGTGGTGGCGGATCTGGAGTCAAGAACGTCGAGCTTTGAATTGAAAACACGATGCAACTTTGAAGTGCAACTATGTAAAGTGTACACCGAGGATATTTTCAAGAGGTTCCAGTTGGAGGTTGAGGGAATGTACTCCTGCTTCAATACAAGGCAGGTCAATGTCAATGGGCCTATTATAACCTACATAGTTAAAGAACGAGTTGAAGTTGAAGGAAATGAGAAGGAAGTCAGATGCTATGAGGTTTTGTATGAAACAACACAAGTGGATATTCGATGTATCTGCAGTTTGTTCAACTACAAAGGGTATCTGTGCAGGCATGCATTAAACGTTCTAAATTACAATGGAGTGGAAGTAATCCCGTCCCGATACATTTTGCCACGGTGGAGTAAAGATTTCAAGCGCAGGTATCTTCTGCATCAAGGATCCAGTAATGTTGATGTGTATGACCCAGCATACTGGCGTAATCATCTTTATAATCTCGCCCTTCCAGTTGCGGAAGAAGGGGCACAATCTGGGGAACATTATAAGACGACGTTGCAAGCATTGGAGGAGTTGTTGAACAAGTTTCATCTTGTAGAGGATACCCTCAATGTAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

667

Amino Acids

77.44

Weight (kDa)

6.61

Isoelectric Point (pI)

37.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 54 - 138 7.8e-24 FAR1 DNA-binding domain
MULE PF10551 261 - 353 2.2e-24 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000252)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80010
fragaria_vesca FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1580, 1878, 1929
AatII GACGTC 1 cut(s) 718
Acc36I ACCTGC 3 cut(s) 263, 1546, 1797
AccB1I GGYRCC 1 cut(s) 951
AccBSI CCGCTC 1 cut(s) 241
AccII CGCG 1 cut(s) 1293
AciI CCGC 6 cut(s) 241, 1183, 1274, 1291, 1412, 1898
AclI AACGTT 1 cut(s) 1731
AclWI GGATC 7 cut(s) 705, 1009, 1236, 1276, 1422, 1821, 1834
AcsI RAATTY 1 cut(s) 500
AcuI CTGAAG 3 cut(s) 597, 1106, 1196
AcyI GRCGYC 2 cut(s) 715, 952
AdeI CACNNNGTG 1 cut(s) 798
AfaI GTAC 4 cut(s) 761, 1332, 1487, 1535
AfiI CCNNNNNNNGG 5 cut(s) 125, 369, 750, 961, 1519
AjnI CCWGG 3 cut(s) 743, 749, 1163
AjuI GAANNNNNNNTTGG 2 cut(s) 177, 209
AloI GAACNNNNNNTCC 2 cut(s) 313, 345
AluBI AGCT 7 cut(s) 352, 391, 517, 1148, 1305, 1379, 1437
AluI AGCT 7 cut(s) 352, 391, 517, 1148, 1305, 1379, 1437
Alw26I GTCTC 3 cut(s) 20, 301, 308
AlwI GGATC 7 cut(s) 705, 1009, 1236, 1276, 1422, 1821, 1834
AlwNI CAGNNNCTG 1 cut(s) 1007
AoxI GGCC 2 cut(s) 747, 1571
ApeKI GCWGC 2 cut(s) 264, 461
ApoI RAATTY 1 cut(s) 500
ArsI GACNNNNNNTTYG 2 cut(s) 1253, 1285
AspLEI GCGC 3 cut(s) 954, 1395, 1806
AspS9I GGNCC 3 cut(s) 106, 747, 1571
AsuHPI GGTGA 2 cut(s) 421, 1024
AvaII GGWCC 1 cut(s) 106
BaeGI GKGCMC 1 cut(s) 1912
BamHI GGATCC 1 cut(s) 1826
BanI GGYRCC 1 cut(s) 951
BarI GAAGNNNNNNTAC 4 cut(s) 752, 784, 1526, 1558
BbvI GCAGC 2 cut(s) 276, 448
BccI CCATC 5 cut(s) 411, 688, 704, 858, 1316
BceAI ACGGC 1 cut(s) 778
BcgI CGANNNNNNTGC 2 cut(s) 1665, 1699
BciT130I CCWGG 3 cut(s) 745, 751, 1165
BciVI GTATCC 1 cut(s) 1978
BclI TGATCA 3 cut(s) 453, 595, 1176
BcoDI GTCTC 3 cut(s) 20, 301, 308
BfaI CTAG 3 cut(s) 701, 947, 1376
BfmI CTRYAG 2 cut(s) 780, 1684
BfoI RGCGCY 1 cut(s) 955
BfuAI ACCTGC 3 cut(s) 263, 1546, 1797
BfuI GTATCC 1 cut(s) 1978
BisI GCNGC 3 cut(s) 265, 462, 1184
BlsI GCNGC 3 cut(s) 266, 463, 1185
Bme1390I CCNGG 3 cut(s) 745, 751, 1165
Bme18I GGWCC 1 cut(s) 106
BmgT120I GGNCC 3 cut(s) 106, 747, 1571
BmiI GGNNCC 6 cut(s) 108, 884, 953, 1245, 1511, 1828
BmrFI CCNGG 3 cut(s) 745, 751, 1165
BmrI ACTGGG 2 cut(s) 1202, 1249
BmsI GCATC 8 cut(s) 207, 545, 619, 730, 909, 1445, 1625, 1828
BmuI ACTGGG 2 cut(s) 1202, 1249
BplI GAGNNNNNCTC 2 cut(s) 125, 157
BpmI CTGGAG 1 cut(s) 1439
BsaBI GATNNNNATC 2 cut(s) 344, 1286
BsaHI GRCGYC 2 cut(s) 715, 952
BsaI GGTCTC 1 cut(s) 301
BsaJI CCNNGG 6 cut(s) 744, 750, 886, 1164, 1491, 1781
BsaXI ACNNNNNCTCC 4 cut(s) 1740, 1770, 1943, 1973
Bsc4I CCNNNNNNNGG 5 cut(s) 125, 369, 750, 961, 1519
Bse1I ACTGG 9 cut(s) 29, 328, 1197, 1244, 1247, 1513, 1830, 1865, 1892
Bse3DI GCAATG 4 cut(s) 342, 456, 989, 1030
Bse8I GATNNNNATC 2 cut(s) 344, 1286
BseBI CCWGG 3 cut(s) 745, 751, 1165
BseDI CCNNGG 6 cut(s) 744, 750, 886, 1164, 1491, 1781
BseGI GGATG 3 cut(s) 544, 560, 924
BseJI GATNNNNATC 2 cut(s) 344, 1286
BseLI CCNNNNNNNGG 5 cut(s) 125, 369, 750, 961, 1519
BseMI GCAATG 4 cut(s) 342, 456, 989, 1030
BseMII CTCAG 4 cut(s) 303, 710, 999, 1140
BseNI ACTGG 9 cut(s) 29, 328, 1197, 1244, 1247, 1513, 1830, 1865, 1892
BseRI GAGGAG 1 cut(s) 1967
BseSI GKGCMC 1 cut(s) 1912
BseXI GCAGC 2 cut(s) 276, 448
BseYI CCCAGC 1 cut(s) 1852
BsgI GTGCAG 2 cut(s) 291, 1735
Bsh1236I CGCG 1 cut(s) 1293
BshFI GGCC 2 cut(s) 749, 1573
BshNI GGYRCC 1 cut(s) 951
BslFI GGGAC 2 cut(s) 92, 1750
BslI CCNNNNNNNGG 5 cut(s) 125, 369, 750, 961, 1519
BsmAI GTCTC 3 cut(s) 20, 301, 308
BsmFI GGGAC 2 cut(s) 92, 1750
BsnI GGCC 2 cut(s) 749, 1573
Bso31I GGTCTC 1 cut(s) 301
Bsp1286I GDGCHC 1 cut(s) 1912
Bsp1407I TGTACA 2 cut(s) 1330, 1485
BspACI CCGC 6 cut(s) 241, 1183, 1274, 1291, 1412, 1898
BspANI GGCC 2 cut(s) 749, 1573
BspCNI CTCAG 4 cut(s) 304, 711, 1000, 1141
BspFNI CGCG 1 cut(s) 1293
BspLI GGNNCC 6 cut(s) 108, 884, 953, 1245, 1511, 1828
BspMAI CTGCAG 1 cut(s) 1688
BspMI ACCTGC 3 cut(s) 263, 1546, 1797
BspPI GGATC 7 cut(s) 705, 1009, 1236, 1276, 1422, 1821, 1834
BspT107I GGYRCC 1 cut(s) 951
BspTNI GGTCTC 1 cut(s) 301
BsrBI CCGCTC 1 cut(s) 241
BsrDI GCAATG 4 cut(s) 342, 456, 989, 1030
BsrGI TGTACA 2 cut(s) 1330, 1485
BsrI ACTGG 9 cut(s) 29, 328, 1197, 1244, 1247, 1513, 1830, 1865, 1892
BssECI CCNNGG 6 cut(s) 744, 750, 886, 1164, 1491, 1781
BssNI GRCGYC 2 cut(s) 715, 952
BssT1I CCWWGG 1 cut(s) 886
Bst2UI CCWGG 3 cut(s) 745, 751, 1165
Bst4CI ACNGT 3 cut(s) 124, 781, 1785
BstACI GRCGYC 2 cut(s) 715, 952
BstAPI GCANNNNNTGC 1 cut(s) 555
BstAUI TGTACA 2 cut(s) 1330, 1485
BstC8I GCNNGC 7 cut(s) 944, 1027, 1307, 1311, 1718, 1722, 1944
BstDEI CTNAG 6 cut(s) 312, 603, 617, 719, 1008, 1149
BstDSI CCRYGG 1 cut(s) 1781
BstF5I GGATG 3 cut(s) 544, 560, 924
BstFNI CGCG 1 cut(s) 1293
BstH2I RGCGCY 1 cut(s) 955
BstHHI GCGC 3 cut(s) 954, 1395, 1806
BstMAI GTCTC 3 cut(s) 20, 301, 308
BstMWI GCNNNNNNNGC 2 cut(s) 470, 555
BstNI CCWGG 3 cut(s) 745, 751, 1165
BstNSI RCATGY 2 cut(s) 946, 1724
BstSCI CCNGG 3 cut(s) 743, 749, 1163
BstSFI CTRYAG 2 cut(s) 780, 1684
BstSLI GKGCMC 1 cut(s) 1912
BstUI CGCG 1 cut(s) 1293
BstV1I GCAGC 2 cut(s) 276, 448
BstX2I RGATCY 3 cut(s) 697, 1414, 1826
BstXI CCANNNNNNTGG 1 cut(s) 1860
BstYI RGATCY 3 cut(s) 697, 1414, 1826
BsuI GTATCC 1 cut(s) 1978
BsuRI GGCC 2 cut(s) 749, 1573
BtgI CCRYGG 1 cut(s) 1781
BtgZI GCGATG 1 cut(s) 60
BtsCI GGATG 3 cut(s) 544, 560, 924
BtsI GCAGTG 2 cut(s) 274, 1008
BtsIMutI CAGTG 5 cut(s) 36, 274, 777, 906, 1008
BveI ACCTGC 3 cut(s) 263, 1546, 1797
Cac8I GCNNGC 7 cut(s) 944, 1027, 1307, 1311, 1718, 1722, 1944
CaiI CAGNNNCTG 1 cut(s) 1007
CfoI GCGC 3 cut(s) 954, 1395, 1806
Cfr13I GGNCC 3 cut(s) 106, 747, 1571
Csp6I GTAC 4 cut(s) 760, 1331, 1486, 1534
CspCI CAANNNNNGTGG 2 cut(s) 1647, 1682
CviQI GTAC 4 cut(s) 760, 1331, 1486, 1534
DdeI CTNAG 6 cut(s) 312, 603, 617, 719, 1008, 1149
DinI GGCGCC 1 cut(s) 953
DraI TTTAAA 2 cut(s) 585, 1257
DraIII CACNNNGTG 1 cut(s) 798
EciI GGCGGA 1 cut(s) 1427
Eco130I CCWWGG 1 cut(s) 886
Eco31I GGTCTC 1 cut(s) 301
Eco47I GGWCC 1 cut(s) 106
Eco57I CTGAAG 3 cut(s) 597, 1106, 1196
EcoO109I RGGNCCY 1 cut(s) 106
EcoRII CCWGG 3 cut(s) 743, 749, 1163
EcoT14I CCWWGG 1 cut(s) 886
EcoT22I ATGCAT 2 cut(s) 944, 1726
EgeI GGCGCC 1 cut(s) 953
EheI GGCGCC 1 cut(s) 953
ErhI CCWWGG 1 cut(s) 886
FaqI GGGAC 2 cut(s) 92, 1750
FauI CCCGC 1 cut(s) 1267
FbaI TGATCA 3 cut(s) 453, 595, 1176
Fnu4HI GCNGC 3 cut(s) 265, 462, 1184
FokI GGATG 3 cut(s) 551, 567, 931
Fsp4HI GCNGC 3 cut(s) 265, 462, 1184
FspBI CTAG 3 cut(s) 701, 947, 1376
GlaI GCGC 3 cut(s) 953, 1394, 1805
GluI GCNGC 3 cut(s) 265, 462, 1184
GsaI CCCAGC 1 cut(s) 1856
GsuI CTGGAG 1 cut(s) 1439
HaeII RGCGCY 1 cut(s) 955
HaeIII GGCC 2 cut(s) 749, 1573
HhaI GCGC 3 cut(s) 954, 1395, 1806
Hin1I GRCGYC 2 cut(s) 715, 952
Hin6I GCGC 3 cut(s) 952, 1393, 1804
HinP1I GCGC 3 cut(s) 952, 1393, 1804
HinfI GANTC 6 cut(s) 140, 359, 412, 896, 1133, 1421
HphI GGTGA 2 cut(s) 421, 1024
Hpy166II GTNNAC 8 cut(s) 101, 358, 416, 643, 760, 847, 1486, 1488
Hpy188I TCNGA 6 cut(s) 203, 306, 720, 1009, 1215, 1634
Hpy188III TCNNGA 7 cut(s) 280, 701, 1067, 1418, 1425, 1504, 1767
Hpy8I GTNNAC 8 cut(s) 101, 358, 416, 643, 760, 847, 1486, 1488
Hpy99I CGWCG 3 cut(s) 1364, 1435, 1939
HpyAV CCTTC 8 cut(s) 35, 572, 617, 1081, 1607, 1618, 1898, 1898
HpyCH4III ACNGT 3 cut(s) 124, 781, 1785
HpyCH4IV ACGT 6 cut(s) 715, 797, 1343, 1430, 1731, 1937
HpyF10VI GCNNNNNNNGC 2 cut(s) 470, 555
HpyF3I CTNAG 6 cut(s) 312, 603, 617, 719, 1008, 1149
HpySE526I ACGT 6 cut(s) 715, 797, 1343, 1430, 1731, 1937
Hsp92I GRCGYC 2 cut(s) 715, 952
HspAI GCGC 3 cut(s) 952, 1393, 1804
KasI GGCGCC 1 cut(s) 951
Ksp22I TGATCA 3 cut(s) 453, 595, 1176
LmnI GCTCC 1 cut(s) 927
Lsp1109I GCAGC 2 cut(s) 276, 448
LweI GCATC 8 cut(s) 207, 545, 619, 730, 909, 1445, 1625, 1828
MaeI CTAG 3 cut(s) 701, 947, 1376
MaeII ACGT 6 cut(s) 715, 797, 1343, 1430, 1731, 1937
MaeIII GTNAC 3 cut(s) 493, 773, 1996
MbiI CCGCTC 1 cut(s) 241
MboII GAAGA 3 cut(s) 17, 1805, 1913
MflI RGATCY 3 cut(s) 697, 1414, 1826
MhlI GDGCHC 1 cut(s) 1912
MluCI AATT 9 cut(s) 211, 254, 383, 500, 665, 679, 996, 1442, 1738
Mly113I GGCGCC 1 cut(s) 952
MlyI GAGTC 5 cut(s) 134, 353, 421, 905, 1430
MmeI TCCRAC 2 cut(s) 58, 1497
Mph1103I ATGCAT 2 cut(s) 944, 1726
MseI TTAA 6 cut(s) 257, 566, 584, 1256, 1593, 1727
MslI CAYNNNNRTG 1 cut(s) 203
MspR9I CCNGG 3 cut(s) 745, 751, 1165
MvaI CCWGG 3 cut(s) 745, 751, 1165
MvnI CGCG 1 cut(s) 1293
MwoI GCNNNNNNNGC 2 cut(s) 470, 555
NarI GGCGCC 1 cut(s) 952
NlaIV GGNNCC 6 cut(s) 108, 884, 953, 1245, 1511, 1828
NmuCI GTSAC 1 cut(s) 773
NsiI ATGCAT 2 cut(s) 944, 1726
NspI RCATGY 2 cut(s) 946, 1724
PaeI GCATGC 2 cut(s) 946, 1724
PfeI GAWTC 1 cut(s) 1133
PkrI GCNGC 3 cut(s) 266, 463, 1185
PleI GAGTC 5 cut(s) 134, 353, 420, 904, 1429
PluTI GGCGCC 1 cut(s) 955
PpsI GAGTC 5 cut(s) 134, 353, 420, 904, 1429
PpuMI RGGWCCY 1 cut(s) 106
PsiI TTATAA 3 cut(s) 1580, 1878, 1929
Psp1406I AACGTT 1 cut(s) 1731
Psp5II RGGWCCY 1 cut(s) 106
Psp6I CCWGG 3 cut(s) 743, 749, 1163
PspFI CCCAGC 1 cut(s) 1852
PspGI CCWGG 3 cut(s) 743, 749, 1163
PspN4I GGNNCC 6 cut(s) 108, 884, 953, 1245, 1511, 1828
PspPI GGNCC 3 cut(s) 106, 747, 1571
PspPPI RGGWCCY 1 cut(s) 106
PstI CTGCAG 1 cut(s) 1688
PstNI CAGNNNCTG 1 cut(s) 1007
PsuI RGATCY 3 cut(s) 697, 1414, 1826
RsaI GTAC 4 cut(s) 761, 1332, 1487, 1535
RsaNI GTAC 4 cut(s) 760, 1331, 1486, 1534
RseI CAYNNNNRTG 1 cut(s) 203
SaqAI TTAA 6 cut(s) 257, 566, 584, 1256, 1593, 1727
SatI GCNGC 3 cut(s) 265, 462, 1184
Sau96I GGNCC 3 cut(s) 106, 747, 1571
SchI GAGTC 5 cut(s) 134, 353, 421, 905, 1430
ScrFI CCNGG 3 cut(s) 745, 751, 1165
SduI GDGCHC 1 cut(s) 1912
SfaNI GCATC 8 cut(s) 207, 545, 619, 730, 909, 1445, 1625, 1828
SfcI CTRYAG 2 cut(s) 780, 1684
SfoI GGCGCC 1 cut(s) 953
SinI GGWCC 1 cut(s) 106
SmiMI CAYNNNNRTG 1 cut(s) 203
SphI GCATGC 2 cut(s) 946, 1724
Sse9I AATT 9 cut(s) 211, 254, 383, 500, 665, 679, 996, 1442, 1738
SsiI CCGC 6 cut(s) 241, 1183, 1274, 1291, 1412, 1898
SspDI GGCGCC 1 cut(s) 951
SspMI CTAG 3 cut(s) 701, 947, 1376
StyD4I CCNGG 3 cut(s) 743, 749, 1163
StyI CCWWGG 1 cut(s) 886
TaaI ACNGT 3 cut(s) 124, 781, 1785
TaiI ACGT 6 cut(s) 718, 800, 1346, 1433, 1734, 1940
TaqI TCGA 4 cut(s) 523, 1362, 1433, 1675
TasI AATT 9 cut(s) 211, 254, 383, 500, 665, 679, 996, 1442, 1738
TatI WGTACW 3 cut(s) 1330, 1485, 1533
TauI GCSGC 1 cut(s) 1186
TfiI GAWTC 1 cut(s) 1133
Tru1I TTAA 6 cut(s) 257, 566, 584, 1256, 1593, 1727
Tru9I TTAA 6 cut(s) 257, 566, 584, 1256, 1593, 1727
TscAI CASTG 5 cut(s) 36, 274, 784, 906, 1008
TseFI GTSAC 1 cut(s) 773
TseI GCWGC 2 cut(s) 264, 461
Tsp45I GTSAC 1 cut(s) 773
TspGWI ACGGA 3 cut(s) 567, 853, 914
TspRI CASTG 5 cut(s) 36, 274, 784, 906, 1008
VpaK11BI GGWCC 1 cut(s) 106
XapI RAATTY 1 cut(s) 500
XbaI TCTAGA 1 cut(s) 700
XceI RCATGY 2 cut(s) 946, 1724
XspI CTAG 3 cut(s) 701, 947, 1376
ZraI GACGTC 1 cut(s) 716
Zsp2I ATGCAT 2 cut(s) 944, 1726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.