Rh6AG385200

Protein FAR1-RELATED SEQUENCE 6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000252
Physical Location & Seq
Forward (+)
58453127 .. 58456700
3574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG385200.1

Sequence Viewer

Length: 2001 bp
ATGGAAGAAGTTTGTCTCAATAGTGAGCCTGTGTTTGATGAAGGCGATGAGTATGACTTGGAGGGAGGGCATGCTGTTGGTGGGGAAGCAAAAAGTAAACAGGTCCCCCCACAACCTACTGTCGGTTTGGAGTTTGACTCTTTTGATGAAGCCTATGATTTCTACAATGTCTATGGTAAAGAGCAGGGATTTGGCATCAGGGTGAGCAATTCATGGTTCAGGTCAAAGAGAAAAGAGCGGTATAGAGCAAAATTAAGTTGCAGCAGTGCAGGTTTCAAGAAAAAGAGTGAAGCCAACAATCCGAGACCTGAGACAAGGACTGGTTGTCCTGCAATGATAGTTATCAAGCTGGTGGACTCCCAAAGGTGGAGAATAGTTGAATTAGAGCTTCAACACAACCATCAGGTGAGTCCACAGATCAAAAGGTTTTACAAGTCGCATAAGAAAATGATTGTTGCTGCCAAAAATGCACAACCACAGCCAAATCCTGTTACAGAAGTTCATACTATCAAGCTGTATCGAACACCTGTTATGGATGTTGGGTGCAATGGATGCTCAACTTTAAGTGAAACTGAAGGTTTAAATCCTATTGATCACTCTAAGCACTTGCAACTTAGAGAAGGAGATGCTCATGCAGTTTACAACTACTTTTGTCGAATGAAATTGACAAATCCTAATTTTTATTATTTGATGGATCTAGATGATGATGGACGTCTGAGGAATGTGTTTTGGGCTGATGCCAGGTCCAGGGCTGCGTACAGCTACTTCTGTGACACTGTAGCCATAGACACAACATGCTTGGCAAACAAATATGAACTCCCCCTGATTTCATTTGTTGGTGTAAACCATCATGGACAATCCGTGCTGTTGGGCTGTGGGTTCCTCGGGGTTGAGTCAGTGGATTGTTATGTTTGGATGCTCGGTGCATGGCTGAAATGCATGCTAGGGCGCCCTCCGCAGGTTTTCATTACTGACCAATGCAAACCATTGCAAATTGCAGTGTCTGAGGTGATCCCAGAGGCTCGCCATTGCTATTGTTTGTCATATATCATGCAGAGAGTTCCAGAGAGGTTGGGAGGACTGAAGGGATATGAAGCAATCAAAAGACACTTGCAGAAATCAATCTATGATTACTTGAAAATAGCTGAGTTTGAAACTTCCTGGGCTGAAATGATCAAGCGGCATGAACTGGGGAATAATAAATGGCTTCGGACATTGTATGAGGATCGGCAGAACTGGGTTCCAGTTTATTTAAAAGACACATTTTTTGCGGGAATGATCCCTATCCGTGAAAATGAGAGCTTGCCTGCATTTTTTGATGGTTATGTACATAAACATACGTCTTTCAAGGAGTTTGTCGATAAGTATGACCTAGCTCTACATAGGAAGCGCATGAAAGAGGTGGTGGCGGATCTGGAGTCAAGAATGTCGAGCTTTGAATTGAAAACACGATGCAACTTTGAAGTGCAACTATGTAAAGTGTACACCAAGGATATTTTCAAGAGGTTCCAGTTGGAGGTTGAGGGAATGTACTCCTGCTTCAATACAAGGCAGGTCAATGTCAGTGGGCCTATAATAACCTACATAGTTAAAGAACGAGTTGAAGTTGAAGGAAATGAGAAGGAAGTCCGATGCTATGAGGTTTTGTATGAGACAACACAAGTGGATATTCGATGTATCTGCAGTCTGTTCAACTACAAAGGGTATCTGTGCAGGCATGCATTAAACGTTCTAAATTACAATGGTGTGGAAGTAATCCCGTCCCGATACATTTTGCCACGGTGGTGTAAAGATTTCAAGCGCAGGTATCTTCTGCATCAAGGATCCAGTAATATTGATGTGTATGACCCAGCATACTGGCGTAATCATCTTTATAATCTCGCCCTTCCAGTTGCGGAAGAAGGGGCACAATCTGAGGAACATTATAAGACGACGTTGCAAGCATTGGAGGAGTTATTGAACAAGTTTCATCTTGTAGAGGACACCCTCAATGTAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

666

Amino Acids

77.37

Weight (kDa)

7.04

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 53 - 137 1.1e-23 FAR1 DNA-binding domain
MULE PF10551 260 - 352 6.9e-24 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000252)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80010
fragaria_vesca FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1875, 1926
AatII GACGTC 1 cut(s) 715
Acc36I ACCTGC 4 cut(s) 260, 949, 1543, 1794
AccB1I GGYRCC 1 cut(s) 948
AccBSI CCGCTC 1 cut(s) 238
AciI CCGC 6 cut(s) 238, 956, 1180, 1271, 1409, 1895
AclI AACGTT 1 cut(s) 1728
AclWI GGATC 7 cut(s) 702, 1006, 1233, 1273, 1419, 1818, 1831
AcuI CTGAAG 2 cut(s) 594, 1103
AcyI GRCGYC 2 cut(s) 712, 949
AfaI GTAC 4 cut(s) 758, 1329, 1484, 1532
AfiI CCNNNNNNNGG 5 cut(s) 122, 366, 747, 958, 1516
AhdI GACNNNNNGTC 1 cut(s) 324
AjnI CCWGG 3 cut(s) 740, 746, 1160
AjuI GAANNNNNNNTTGG 2 cut(s) 1481, 1513
AleI CACNNNNGTG 1 cut(s) 1783
AluBI AGCT 8 cut(s) 349, 388, 514, 762, 1145, 1302, 1376, 1434
AluI AGCT 8 cut(s) 349, 388, 514, 762, 1145, 1302, 1376, 1434
Alw26I GTCTC 4 cut(s) 20, 298, 305, 1646
AlwI GGATC 7 cut(s) 702, 1006, 1233, 1273, 1419, 1818, 1831
AlwNI CAGNNNCTG 1 cut(s) 1004
Ama87I CYCGRG 1 cut(s) 884
AoxI GGCC 1 cut(s) 1568
ApeKI GCWGC 3 cut(s) 261, 458, 752
ArsI GACNNNNNNTTYG 2 cut(s) 1250, 1282
AspLEI GCGC 3 cut(s) 951, 1392, 1803
AspS9I GGNCC 3 cut(s) 103, 744, 1568
AsuHPI GGTGA 3 cut(s) 214, 418, 1021
AvaI CYCGRG 1 cut(s) 884
AvaII GGWCC 2 cut(s) 103, 744
BaeGI GKGCMC 1 cut(s) 1909
BamHI GGATCC 1 cut(s) 1823
BanI GGYRCC 1 cut(s) 948
BarI GAAGNNNNNNTAC 4 cut(s) 749, 781, 1523, 1555
BbvI GCAGC 3 cut(s) 273, 445, 739
BccI CCATC 5 cut(s) 408, 685, 701, 855, 1313
BcgI CGANNNNNNTGC 2 cut(s) 1662, 1696
BciT130I CCWGG 3 cut(s) 742, 748, 1162
BclI TGATCA 2 cut(s) 592, 1173
BcoDI GTCTC 4 cut(s) 20, 298, 305, 1646
BfaI CTAG 3 cut(s) 698, 944, 1373
BfmI CTRYAG 2 cut(s) 777, 1681
BfoI RGCGCY 1 cut(s) 952
BfuAI ACCTGC 4 cut(s) 260, 949, 1543, 1794
BisI GCNGC 4 cut(s) 262, 459, 753, 1181
BlsI GCNGC 4 cut(s) 263, 460, 754, 1182
Bme1390I CCNGG 3 cut(s) 742, 748, 1162
Bme18I GGWCC 2 cut(s) 103, 744
BmeRI GACNNNNNGTC 1 cut(s) 324
BmeT110I CYCGRG 1 cut(s) 884
BmgT120I GGNCC 3 cut(s) 103, 744, 1568
BmiI GGNNCC 6 cut(s) 105, 881, 950, 1242, 1508, 1825
BmrFI CCNGG 3 cut(s) 742, 748, 1162
BmrI ACTGGG 2 cut(s) 1199, 1246
BmsI GCATC 8 cut(s) 204, 542, 616, 727, 906, 1442, 1622, 1825
BmuI ACTGGG 2 cut(s) 1199, 1246
BplI GAGNNNNNCTC 2 cut(s) 122, 154
BpmI CTGGAG 1 cut(s) 1436
BsaBI GATNNNNATC 2 cut(s) 341, 1283
BsaHI GRCGYC 2 cut(s) 712, 949
BsaI GGTCTC 1 cut(s) 298
BsaJI CCNNGG 5 cut(s) 747, 883, 1161, 1488, 1778
Bsc4I CCNNNNNNNGG 5 cut(s) 122, 366, 747, 958, 1516
Bse1I ACTGG 8 cut(s) 325, 1194, 1241, 1244, 1510, 1827, 1862, 1889
Bse3DI GCAATG 4 cut(s) 339, 553, 986, 1027
Bse8I GATNNNNATC 2 cut(s) 341, 1283
BseBI CCWGG 3 cut(s) 742, 748, 1162
BseDI CCNNGG 5 cut(s) 747, 883, 1161, 1488, 1778
BseGI GGATG 3 cut(s) 541, 557, 921
BseJI GATNNNNATC 2 cut(s) 341, 1283
BseLI CCNNNNNNNGG 5 cut(s) 122, 366, 747, 958, 1516
BseMI GCAATG 4 cut(s) 339, 553, 986, 1027
BseMII CTCAG 5 cut(s) 300, 707, 996, 1137, 1905
BseNI ACTGG 8 cut(s) 325, 1194, 1241, 1244, 1510, 1827, 1862, 1889
BseRI GAGGAG 1 cut(s) 1964
BseSI GKGCMC 1 cut(s) 1909
BseXI GCAGC 3 cut(s) 273, 445, 739
BseYI CCCAGC 1 cut(s) 1849
BsgI GTGCAG 2 cut(s) 288, 1732
BshFI GGCC 1 cut(s) 1570
BshNI GGYRCC 1 cut(s) 948
BsiHKCI CYCGRG 1 cut(s) 884
BslFI GGGAC 2 cut(s) 89, 1747
BslI CCNNNNNNNGG 5 cut(s) 122, 366, 747, 958, 1516
BsmAI GTCTC 4 cut(s) 20, 298, 305, 1646
BsmFI GGGAC 2 cut(s) 89, 1747
BsnI GGCC 1 cut(s) 1570
Bso31I GGTCTC 1 cut(s) 298
BsoBI CYCGRG 1 cut(s) 884
Bsp1286I GDGCHC 1 cut(s) 1909
Bsp1407I TGTACA 2 cut(s) 1327, 1482
Bsp143I GATC 9 cut(s) 417, 592, 694, 1011, 1173, 1225, 1278, 1411, 1823
BspACI CCGC 6 cut(s) 238, 956, 1180, 1271, 1409, 1895
BspANI GGCC 1 cut(s) 1570
BspCNI CTCAG 5 cut(s) 301, 708, 997, 1138, 1906
BspLI GGNNCC 6 cut(s) 105, 881, 950, 1242, 1508, 1825
BspMAI CTGCAG 1 cut(s) 1685
BspMI ACCTGC 4 cut(s) 260, 949, 1543, 1794
BspPI GGATC 7 cut(s) 702, 1006, 1233, 1273, 1419, 1818, 1831
BspT107I GGYRCC 1 cut(s) 948
BspTNI GGTCTC 1 cut(s) 298
BsrBI CCGCTC 1 cut(s) 238
BsrDI GCAATG 4 cut(s) 339, 553, 986, 1027
BsrGI TGTACA 2 cut(s) 1327, 1482
BsrI ACTGG 8 cut(s) 325, 1194, 1241, 1244, 1510, 1827, 1862, 1889
BssECI CCNNGG 5 cut(s) 747, 883, 1161, 1488, 1778
BssMI GATC 9 cut(s) 417, 592, 694, 1011, 1173, 1225, 1278, 1411, 1823
BssNI GRCGYC 2 cut(s) 712, 949
BssT1I CCWWGG 1 cut(s) 1488
Bst2UI CCWGG 3 cut(s) 742, 748, 1162
Bst4CI ACNGT 3 cut(s) 121, 778, 1782
BstACI GRCGYC 2 cut(s) 712, 949
BstAPI GCANNNNNTGC 1 cut(s) 552
BstAUI TGTACA 2 cut(s) 1327, 1482
BstC8I GCNNGC 8 cut(s) 72, 941, 1024, 1304, 1308, 1715, 1719, 1941
BstDEI CTNAG 7 cut(s) 309, 600, 614, 716, 1005, 1146, 1914
BstDSI CCRYGG 1 cut(s) 1778
BstF5I GGATG 3 cut(s) 541, 557, 921
BstH2I RGCGCY 1 cut(s) 952
BstHHI GCGC 3 cut(s) 951, 1392, 1803
BstKTI GATC 9 cut(s) 420, 595, 697, 1014, 1176, 1228, 1281, 1414, 1826
BstMAI GTCTC 4 cut(s) 20, 298, 305, 1646
BstMBI GATC 9 cut(s) 417, 592, 694, 1011, 1173, 1225, 1278, 1411, 1823
BstMWI GCNNNNNNNGC 3 cut(s) 467, 552, 955
BstNI CCWGG 3 cut(s) 742, 748, 1162
BstNSI RCATGY 4 cut(s) 74, 798, 943, 1721
BstSCI CCNGG 3 cut(s) 740, 746, 1160
BstSFI CTRYAG 2 cut(s) 777, 1681
BstSLI GKGCMC 1 cut(s) 1909
BstV1I GCAGC 3 cut(s) 273, 445, 739
BstX2I RGATCY 3 cut(s) 694, 1411, 1823
BstXI CCANNNNNNTGG 1 cut(s) 1857
BstYI RGATCY 3 cut(s) 694, 1411, 1823
BsuRI GGCC 1 cut(s) 1570
BtgI CCRYGG 1 cut(s) 1778
BtgZI GCGATG 1 cut(s) 60
BtsCI GGATG 3 cut(s) 541, 557, 921
BtsI GCAGTG 2 cut(s) 271, 1005
BtsIMutI CAGTG 5 cut(s) 271, 774, 903, 1005, 1570
BveI ACCTGC 4 cut(s) 260, 949, 1543, 1794
Cac8I GCNNGC 8 cut(s) 72, 941, 1024, 1304, 1308, 1715, 1719, 1941
CaiI CAGNNNCTG 1 cut(s) 1004
CfoI GCGC 3 cut(s) 951, 1392, 1803
Cfr13I GGNCC 3 cut(s) 103, 744, 1568
Csp6I GTAC 4 cut(s) 757, 1328, 1483, 1531
CspCI CAANNNNNGTGG 4 cut(s) 1546, 1581, 1644, 1679
CviQI GTAC 4 cut(s) 757, 1328, 1483, 1531
DdeI CTNAG 7 cut(s) 309, 600, 614, 716, 1005, 1146, 1914
DinI GGCGCC 1 cut(s) 950
DpnI GATC 9 cut(s) 419, 594, 696, 1013, 1175, 1227, 1280, 1413, 1825
DpnII GATC 9 cut(s) 417, 592, 694, 1011, 1173, 1225, 1278, 1411, 1823
DraI TTTAAA 2 cut(s) 582, 1254
DriI GACNNNNNGTC 1 cut(s) 324
Eam1105I GACNNNNNGTC 1 cut(s) 324
EciI GGCGGA 1 cut(s) 1424
Eco130I CCWWGG 1 cut(s) 1488
Eco31I GGTCTC 1 cut(s) 298
Eco47I GGWCC 2 cut(s) 103, 744
Eco57I CTGAAG 2 cut(s) 594, 1103
Eco88I CYCGRG 1 cut(s) 884
EcoO109I RGGNCCY 1 cut(s) 103
EcoRII CCWGG 3 cut(s) 740, 746, 1160
EcoT14I CCWWGG 1 cut(s) 1488
EcoT22I ATGCAT 2 cut(s) 941, 1723
EgeI GGCGCC 1 cut(s) 950
EheI GGCGCC 1 cut(s) 950
ErhI CCWWGG 1 cut(s) 1488
FaqI GGGAC 2 cut(s) 89, 1747
FauI CCCGC 1 cut(s) 1264
FbaI TGATCA 2 cut(s) 592, 1173
Fnu4HI GCNGC 4 cut(s) 262, 459, 753, 1181
FokI GGATG 3 cut(s) 548, 564, 928
Fsp4HI GCNGC 4 cut(s) 262, 459, 753, 1181
FspBI CTAG 3 cut(s) 698, 944, 1373
GlaI GCGC 3 cut(s) 950, 1391, 1802
GluI GCNGC 4 cut(s) 262, 459, 753, 1181
GsaI CCCAGC 1 cut(s) 1853
GsuI CTGGAG 1 cut(s) 1436
HaeII RGCGCY 1 cut(s) 952
HaeIII GGCC 1 cut(s) 1570
HhaI GCGC 3 cut(s) 951, 1392, 1803
Hin1I GRCGYC 2 cut(s) 712, 949
Hin6I GCGC 3 cut(s) 949, 1390, 1801
HinP1I GCGC 3 cut(s) 949, 1390, 1801
HinfI GANTC 5 cut(s) 137, 356, 409, 893, 1418
HphI GGTGA 3 cut(s) 214, 418, 1021
Hpy166II GTNNAC 7 cut(s) 98, 355, 413, 640, 844, 1483, 1485
Hpy188I TCNGA 6 cut(s) 303, 717, 1006, 1212, 1631, 1915
Hpy188III TCNNGA 7 cut(s) 277, 698, 1064, 1415, 1422, 1501, 1764
Hpy8I GTNNAC 7 cut(s) 98, 355, 413, 640, 844, 1483, 1485
Hpy99I CGWCG 1 cut(s) 1936
HpyAV CCTTC 8 cut(s) 35, 569, 614, 1078, 1604, 1615, 1895, 1895
HpyCH4III ACNGT 3 cut(s) 121, 778, 1782
HpyCH4IV ACGT 4 cut(s) 712, 1340, 1728, 1934
HpyF10VI GCNNNNNNNGC 3 cut(s) 467, 552, 955
HpyF3I CTNAG 7 cut(s) 309, 600, 614, 716, 1005, 1146, 1914
HpySE526I ACGT 4 cut(s) 712, 1340, 1728, 1934
Hsp92I GRCGYC 2 cut(s) 712, 949
HspAI GCGC 3 cut(s) 949, 1390, 1801
KasI GGCGCC 1 cut(s) 948
Ksp22I TGATCA 2 cut(s) 592, 1173
Kzo9I GATC 9 cut(s) 417, 592, 694, 1011, 1173, 1225, 1278, 1411, 1823
Lsp1109I GCAGC 3 cut(s) 273, 445, 739
LweI GCATC 8 cut(s) 204, 542, 616, 727, 906, 1442, 1622, 1825
MaeI CTAG 3 cut(s) 698, 944, 1373
MaeII ACGT 4 cut(s) 712, 1340, 1728, 1934
MaeIII GTNAC 3 cut(s) 490, 770, 1993
MalI GATC 9 cut(s) 419, 594, 696, 1013, 1175, 1227, 1280, 1413, 1825
MbiI CCGCTC 1 cut(s) 238
MboI GATC 9 cut(s) 417, 592, 694, 1011, 1173, 1225, 1278, 1411, 1823
MboII GAAGA 3 cut(s) 17, 1802, 1910
MflI RGATCY 3 cut(s) 694, 1411, 1823
MhlI GDGCHC 1 cut(s) 1909
MluCI AATT 8 cut(s) 208, 251, 380, 662, 676, 993, 1439, 1735
Mly113I GGCGCC 1 cut(s) 949
MlyI GAGTC 5 cut(s) 131, 350, 418, 902, 1427
MmeI TCCRAC 1 cut(s) 1494
Mph1103I ATGCAT 2 cut(s) 941, 1723
MseI TTAA 6 cut(s) 254, 563, 581, 1253, 1590, 1724
MslI CAYNNNNRTG 2 cut(s) 200, 1783
MspR9I CCNGG 3 cut(s) 742, 748, 1162
MvaI CCWGG 3 cut(s) 742, 748, 1162
MwoI GCNNNNNNNGC 3 cut(s) 467, 552, 955
NarI GGCGCC 1 cut(s) 949
NdeII GATC 9 cut(s) 417, 592, 694, 1011, 1173, 1225, 1278, 1411, 1823
NlaIV GGNNCC 6 cut(s) 105, 881, 950, 1242, 1508, 1825
NmuCI GTSAC 1 cut(s) 770
NsiI ATGCAT 2 cut(s) 941, 1723
NspI RCATGY 4 cut(s) 74, 798, 943, 1721
OliI CACNNNNGTG 1 cut(s) 1783
PaeI GCATGC 3 cut(s) 74, 943, 1721
PkrI GCNGC 4 cut(s) 263, 460, 754, 1182
PleI GAGTC 5 cut(s) 131, 350, 417, 901, 1426
PluTI GGCGCC 1 cut(s) 952
PpsI GAGTC 5 cut(s) 131, 350, 417, 901, 1426
PpuMI RGGWCCY 1 cut(s) 103
PsiI TTATAA 2 cut(s) 1875, 1926
Psp1406I AACGTT 1 cut(s) 1728
Psp5II RGGWCCY 1 cut(s) 103
Psp6I CCWGG 3 cut(s) 740, 746, 1160
PspFI CCCAGC 1 cut(s) 1849
PspGI CCWGG 3 cut(s) 740, 746, 1160
PspN4I GGNNCC 6 cut(s) 105, 881, 950, 1242, 1508, 1825
PspPI GGNCC 3 cut(s) 103, 744, 1568
PspPPI RGGWCCY 1 cut(s) 103
PstI CTGCAG 1 cut(s) 1685
PstNI CAGNNNCTG 1 cut(s) 1004
PsuI RGATCY 3 cut(s) 694, 1411, 1823
RsaI GTAC 4 cut(s) 758, 1329, 1484, 1532
RsaNI GTAC 4 cut(s) 757, 1328, 1483, 1531
RseI CAYNNNNRTG 2 cut(s) 200, 1783
SaqAI TTAA 6 cut(s) 254, 563, 581, 1253, 1590, 1724
SatI GCNGC 4 cut(s) 262, 459, 753, 1181
Sau3AI GATC 9 cut(s) 417, 592, 694, 1011, 1173, 1225, 1278, 1411, 1823
Sau96I GGNCC 3 cut(s) 103, 744, 1568
SchI GAGTC 5 cut(s) 131, 350, 418, 902, 1427
ScrFI CCNGG 3 cut(s) 742, 748, 1162
SduI GDGCHC 1 cut(s) 1909
SfaNI GCATC 8 cut(s) 204, 542, 616, 727, 906, 1442, 1622, 1825
SfcI CTRYAG 2 cut(s) 777, 1681
SfoI GGCGCC 1 cut(s) 950
SinI GGWCC 2 cut(s) 103, 744
SmiMI CAYNNNNRTG 2 cut(s) 200, 1783
SphI GCATGC 3 cut(s) 74, 943, 1721
Sse9I AATT 8 cut(s) 208, 251, 380, 662, 676, 993, 1439, 1735
SsiI CCGC 6 cut(s) 238, 956, 1180, 1271, 1409, 1895
SspDI GGCGCC 1 cut(s) 948
SspI AATATT 1 cut(s) 1834
SspMI CTAG 3 cut(s) 698, 944, 1373
StyD4I CCNGG 3 cut(s) 740, 746, 1160
StyI CCWWGG 1 cut(s) 1488
TaaI ACNGT 3 cut(s) 121, 778, 1782
TaiI ACGT 4 cut(s) 715, 1343, 1731, 1937
TaqI TCGA 5 cut(s) 520, 655, 1359, 1430, 1672
TasI AATT 8 cut(s) 208, 251, 380, 662, 676, 993, 1439, 1735
TatI WGTACW 3 cut(s) 1327, 1482, 1530
TauI GCSGC 1 cut(s) 1183
Tru1I TTAA 6 cut(s) 254, 563, 581, 1253, 1590, 1724
Tru9I TTAA 6 cut(s) 254, 563, 581, 1253, 1590, 1724
TscAI CASTG 5 cut(s) 271, 781, 903, 1005, 1570
TseFI GTSAC 1 cut(s) 770
TseI GCWGC 3 cut(s) 261, 458, 752
Tsp45I GTSAC 1 cut(s) 770
TspGWI ACGGA 2 cut(s) 850, 1277
TspRI CASTG 5 cut(s) 271, 781, 903, 1005, 1570
VpaK11BI GGWCC 2 cut(s) 103, 744
XbaI TCTAGA 1 cut(s) 697
XceI RCATGY 4 cut(s) 74, 798, 943, 1721
XspI CTAG 3 cut(s) 698, 944, 1373
ZraI GACGTC 1 cut(s) 713
Zsp2I ATGCAT 2 cut(s) 941, 1723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.