Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000252

Physical Location & Seq

Genomic Coordinates Forward (+)

49745172 .. 49747407

Gene Structure 2236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G030400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGATGAAGTTTCTCTCAACACGGAGCCAGCGGGCGAGGATGATGCTGATGGGTATGAGATTGAAGGAGACTGTGCAATGACAGAGTTTGTAAGTCAAACTGGCATTATGCAAGGAGAGAATCCTCTCCCTCCTTCGGCTGGAATGGAGTTCGATTCTTATGAGGATGTATATTACTTCTACAATTGCTATGCTAAGCAACAGGGGTTCGGGGTTAGAGTGAGTAATACGTGGTATAGAAAGAGCAAGGAAAGGTACAGAGGAAAGCTTAGCTGCAGTAGTGCAGGTTTCAAAAAGAAGAGTGAAGCTAATCGCCCAAGGCCGGAGACTAGAACCGGTTGTCCAGCAATGGTGAAGTTCAGGTTAATGGAATCCAACAGGTGGAGAATTATTGAAGTTGAGCTCGAGCACAACCATTTGATCAGTACAGCAAGTGGCAAATTTTATAAATCACACAAGAGCATAGGTGGTGGAACCAAAAGATCATTGCAGTTGGATAGTGCTGAAGAAGTACAAAAGATAAGGCTATTCCGAACGGTGATTATTGATTCTGAGAGTAACAGAAGCATAGATGTTGACGAAGGAGAATCTGGTAATAAAGTTGACTACTCCAATCAATTGAAGCTTAAAGAAGGAGATGCCAAAGCTGTTCAGAATTTCTTTTCTCGCTTGCAATTGATGGATCCAGACTTCTTTTATGTAGTGGATCTAAATGAGAAAGGATGCTTGAGAAATTTGTTTTGGGCTGATGCGAGGAGTAGGGTTGCTTACACTTATTTCAGTGACGTAGTTGCCATTGACACTACATGCTTGGAAAAAAATTTGAAGTCCCATTGGTCTCATTCAGTGGATGGGACTATTGAATCCTATACATGGTTGTTTAGAGCTTGGCTTACATGCATATTGGGACGTCCTCCACAAGCCATCATAACTGACCAATGCAGAACATTACAAACTGCTATTGCTGATGTTTTCCCTAGAGCTTCTCATTGTCTTTGCTTGTCTCAAATAATGCACAAGATTCCAGAAAATTTGGGAGGTTCATTTGAGAATGAGGCAATTAAAGCAGCTTTTATTAGAGCAGTTTACTACTCTTTGAGGGTGGAGGAATTTGAAGCAGCCTGGGAGGATATGGTCCAGCGTCATGGAATTAGAGATCATAAATGGCTTCAAGCATTATATGATGATCGAAAGCGGTGGGTTCCAGTATATTTGAAGGATATATTTTTGGCAGGAATGTTTCCTATGCAACCAAATGAGGTTGTCTCTTCATTTTCTGAAGAATTTCTGGTTAAAAGTACTCCTCTGAAGGAATTTCTAGATAAGTATGATCAAGCTCTGCAGACTCATCATCAGCTGGAAGCCTTGGCAGATTTGGATTCAAGAAACTCAAGTTATATGTTCAAATCGGGAAGTCATTTTGAGTTGCAACTCTCGGAACTGTACACTAATGACATCTTAAGGAAGTTTGGAAAGGAGGTAGAGGGGATGTACTCTTGTTTTAGCACAAGACAATTAAATGTCGATGGGCCAGTCATTACATATACAGTGAAGGAACAAACCGAAGTTGATGGAAATAGCAGAGAGATGAGAGATTATGAGGTTTTGTATAATCCATCTGAGATGGAGGTCCTTTGCGTCTGTGGTATGTTCAACTTGAAAGGATATTTATGCAGGCATGCGCTCTCCATCCTAAACCAAAATGGCATGCAGGAGATTCCAGCTCAATACATTCTTTCACGATGGAGAAAAGATGTTAAGCGCAGTTATGTTTATGATCACAGCTGCAGTGGCATTGATATTAATAACCCAGTTCACAGGTACGATCATCTGTATAAATGCATCGTGCAGGTTGTGGAGGAAGGGAGGAAATCACAAGACCGTTACAAGATTGCATTGCAGGAATTGGATGGGATATTGAACAAGCTTTGTATTACAGAAGATTGTGCCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

651

Amino Acids

75.05

Weight (kDa)

5.65

Isoelectric Point (pI)

44.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	60 - 141	1.6e-21	FAR1 DNA-binding domain
MULE	PF10551	286 - 340	5e-13	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80010
fragaria_vesca	FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica	MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica	Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis	pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis	RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata	RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora	Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii	Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa	Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha	Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana	Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	447
AatII	GACGTC	1 cut(s)	913
Acc36I	ACCTGC	2 cut(s)	275, 1840
AccB7I	CCANNNNNTGG	1 cut(s)	381
AciI	CCGC	2 cut(s)	32, 1195
AclWI	GGATC	3 cut(s)	677, 690, 714
AcsI	RAATTY	8 cut(s)	440, 655, 733, 820, 1030, 1109, 1283, 1313
AcuI	CTGAAG	3 cut(s)	525, 1299, 1328
AcyI	GRCGYC	1 cut(s)	910
AfaI	GTAC	7 cut(s)	257, 427, 513, 1300, 1445, 1493, 1823
AfiI	CCNNNNNNNGG	5 cut(s)	136, 140, 322, 381, 873
AflII	CTTAAG	1 cut(s)	1459
AgeI	ACCGGT	1 cut(s)	335
AjnI	CCWGG	1 cut(s)	1121
AjuI	GAANNNNNNNTTGG	2 cut(s)	724, 756
AloI	GAACNNNNNNTCC	2 cut(s)	325, 357
Alw21I	GWGCWC	2 cut(s)	405, 411
Alw26I	GTCTC	5 cut(s)	63, 320, 843, 1008, 1270
AlwI	GGATC	3 cut(s)	677, 690, 714
Ama87I	CYCGRG	1 cut(s)	404
AoxI	GGCC	2 cut(s)	320, 1529
ApeKI	GCWGC	4 cut(s)	273, 1067, 1118, 1785
ApoI	RAATTY	8 cut(s)	440, 655, 733, 820, 1030, 1109, 1283, 1313
AseI	ATTAAT	1 cut(s)	1803
AsiGI	ACCGGT	1 cut(s)	335
Asp700I	GAANNNNTTC	1 cut(s)	1284
AspLEI	GCGC	2 cut(s)	1684, 1764
AspS9I	GGNCC	3 cut(s)	1135, 1529, 1630
AsuHPI	GGTGA	2 cut(s)	364, 550
AvaI	CYCGRG	1 cut(s)	404
AvaII	GGWCC	2 cut(s)	1135, 1630
BamHI	GGATCC	1 cut(s)	682
BanII	GRGCYC	1 cut(s)	405
Bbv12I	GWGCWC	2 cut(s)	405, 411
BbvI	GCAGC	4 cut(s)	260, 1079, 1130, 1772
BcgI	CGANNNNNNTGC	2 cut(s)	26, 60
BciT130I	CCWGG	1 cut(s)	1123
BclI	TGATCA	3 cut(s)	420, 1330, 1777
BcoDI	GTCTC	5 cut(s)	63, 320, 843, 1008, 1270
BfaI	CTAG	3 cut(s)	330, 978, 1319
BfmI	CTRYAG	3 cut(s)	274, 1340, 1786
BfrI	CTTAAG	1 cut(s)	1459
BfuAI	ACCTGC	2 cut(s)	275, 1840
BisI	GCNGC	4 cut(s)	274, 1068, 1119, 1786
BlpI	GCTNAGC	2 cut(s)	195, 269
BlsI	GCNGC	4 cut(s)	275, 1069, 1120, 1787
BmcAI	AGTACT	1 cut(s)	1300
Bme1390I	CCNGG	1 cut(s)	1123
Bme18I	GGWCC	2 cut(s)	1135, 1630
BmeT110I	CYCGRG	1 cut(s)	404
BmgT120I	GGNCC	3 cut(s)	1135, 1529, 1630
BmiI	GGNNCC	4 cut(s)	27, 475, 684, 1203
BmrFI	CCNGG	1 cut(s)	1123
BmrI	ACTGGG	1 cut(s)	1805
BmsI	GCATC	5 cut(s)	34, 628, 713, 739, 1851
BmuI	ACTGGG	1 cut(s)	1805
BplI	GAGNNNNNCTC	2 cut(s)	1250, 1282
Bpu1102I	GCTNAGC	2 cut(s)	195, 269
BpuEI	CTTGAG	2 cut(s)	748, 1375
BsaAI	YACGTR	1 cut(s)	231
BsaHI	GRCGYC	1 cut(s)	910
BsaI	GGTCTC	1 cut(s)	843
BsaJI	CCNNGG	3 cut(s)	317, 1122, 1365
BsaWI	WCCGGW	1 cut(s)	335
Bsc4I	CCNNNNNNNGG	5 cut(s)	136, 140, 322, 381, 873
Bse118I	RCCGGY	1 cut(s)	335
Bse1I	ACTGG	4 cut(s)	106, 1205, 1532, 1811
Bse3DI	GCAATG	4 cut(s)	84, 354, 485, 1895
BseBI	CCWGG	1 cut(s)	1123
BseDI	CCNNGG	3 cut(s)	317, 1122, 1365
BseGI	GGATG	8 cut(s)	10, 46, 172, 728, 856, 1494, 1689, 1915
BseLI	CCNNNNNNNGG	5 cut(s)	136, 140, 322, 381, 873
BseMI	GCAATG	4 cut(s)	84, 354, 485, 1895
BseMII	CTCAG	2 cut(s)	543, 1611
BseNI	ACTGG	4 cut(s)	106, 1205, 1532, 1811
BseRI	GAGGAG	2 cut(s)	769, 1293
BseXI	GCAGC	4 cut(s)	260, 1079, 1130, 1772
BsgI	GTGCAG	2 cut(s)	303, 1868
BshFI	GGCC	2 cut(s)	322, 1531
BshTI	ACCGGT	1 cut(s)	335
BsiHKAI	GWGCWC	2 cut(s)	405, 411
BsiHKCI	CYCGRG	1 cut(s)	404
BsiSI	CCGG	2 cut(s)	323, 336
BslFI	GGGAC	3 cut(s)	814, 868, 921
BslI	CCNNNNNNNGG	5 cut(s)	136, 140, 322, 381, 873
BsmAI	GTCTC	5 cut(s)	63, 320, 843, 1008, 1270
BsmFI	GGGAC	3 cut(s)	814, 868, 921
BsnI	GGCC	2 cut(s)	322, 1531
Bso31I	GGTCTC	1 cut(s)	843
BsoBI	CYCGRG	1 cut(s)	404
Bsp1286I	GDGCHC	2 cut(s)	405, 411
Bsp1407I	TGTACA	1 cut(s)	1443
Bsp143I	GATC	9 cut(s)	420, 482, 682, 706, 1156, 1186, 1330, 1777, 1825
Bsp1720I	GCTNAGC	2 cut(s)	195, 269
BspACI	CCGC	2 cut(s)	32, 1195
BspANI	GGCC	2 cut(s)	322, 1531
BspCNI	CTCAG	2 cut(s)	544, 1612
BspLI	GGNNCC	4 cut(s)	27, 475, 684, 1203
BspMAI	CTGCAG	3 cut(s)	278, 1344, 1790
BspMI	ACCTGC	2 cut(s)	275, 1840
BspPI	GGATC	3 cut(s)	677, 690, 714
BspTI	CTTAAG	1 cut(s)	1459
BspTNI	GGTCTC	1 cut(s)	843
BsrDI	GCAATG	4 cut(s)	84, 354, 485, 1895
BsrFI	RCCGGY	1 cut(s)	335
BsrGI	TGTACA	1 cut(s)	1443
BsrI	ACTGG	4 cut(s)	106, 1205, 1532, 1811
BssAI	RCCGGY	1 cut(s)	335
BssECI	CCNNGG	3 cut(s)	317, 1122, 1365
BssMI	GATC	9 cut(s)	420, 482, 682, 706, 1156, 1186, 1330, 1777, 1825
BssNI	GRCGYC	1 cut(s)	910
BssT1I	CCWWGG	2 cut(s)	317, 1365
Bst2UI	CCWGG	1 cut(s)	1123
Bst4CI	ACNGT	5 cut(s)	74, 538, 1443, 1549, 1883
Bst6I	CTCTTC	2 cut(s)	293, 1273
BstACI	GRCGYC	1 cut(s)	910
BstAFI	CTTAAG	1 cut(s)	1459
BstAUI	TGTACA	1 cut(s)	1443
BstBAI	YACGTR	1 cut(s)	231
BstC8I	GCNNGC	6 cut(s)	30, 34, 671, 1676, 1680, 1709
BstDEI	CTNAG	4 cut(s)	195, 269, 552, 1620
BstF5I	GGATG	8 cut(s)	10, 46, 172, 728, 856, 1494, 1689, 1915
BstHHI	GCGC	2 cut(s)	1684, 1764
BstKTI	GATC	9 cut(s)	423, 485, 685, 709, 1159, 1189, 1333, 1780, 1828
BstMAI	GTCTC	5 cut(s)	63, 320, 843, 1008, 1270
BstMBI	GATC	9 cut(s)	420, 482, 682, 706, 1156, 1186, 1330, 1777, 1825
BstMWI	GCNNNNNNNGC	2 cut(s)	1064, 1791
BstNI	CCWGG	1 cut(s)	1123
BstNSI	RCATGY	4 cut(s)	810, 900, 1682, 1711
BstSCI	CCNGG	1 cut(s)	1121
BstSFI	CTRYAG	3 cut(s)	274, 1340, 1786
BstV1I	GCAGC	4 cut(s)	260, 1079, 1130, 1772
BstX2I	RGATCY	2 cut(s)	682, 706
BstXI	CCANNNNNNTGG	1 cut(s)	1145
BstYI	RGATCY	2 cut(s)	682, 706
BsuRI	GGCC	2 cut(s)	322, 1531
BtsCI	GGATG	8 cut(s)	10, 46, 172, 728, 856, 1494, 1689, 1915
BtsI	GCAGTG	1 cut(s)	1795
BtsIMutI	CAGTG	4 cut(s)	787, 852, 1554, 1795
BveI	ACCTGC	2 cut(s)	275, 1840
Cac8I	GCNNGC	6 cut(s)	30, 34, 671, 1676, 1680, 1709
CfoI	GCGC	2 cut(s)	1684, 1764
Cfr10I	RCCGGY	1 cut(s)	335
Cfr13I	GGNCC	3 cut(s)	1135, 1529, 1630
CseI	GACGC	2 cut(s)	1130, 1627
Csp6I	GTAC	7 cut(s)	256, 426, 512, 1299, 1444, 1492, 1822
CspAI	ACCGGT	1 cut(s)	335
CviAII	CATG	6 cut(s)	807, 873, 897, 1145, 1679, 1708
CviQI	GTAC	7 cut(s)	256, 426, 512, 1299, 1444, 1492, 1822
DdeI	CTNAG	4 cut(s)	195, 269, 552, 1620
DpnI	GATC	9 cut(s)	422, 484, 684, 708, 1158, 1188, 1332, 1779, 1827
DpnII	GATC	9 cut(s)	420, 482, 682, 706, 1156, 1186, 1330, 1777, 1825
Eam1104I	CTCTTC	2 cut(s)	293, 1273
EarI	CTCTTC	2 cut(s)	293, 1273
Ecl136II	GAGCTC	1 cut(s)	403
Eco130I	CCWWGG	2 cut(s)	317, 1365
Eco24I	GRGCYC	1 cut(s)	405
Eco31I	GGTCTC	1 cut(s)	843
Eco47I	GGWCC	2 cut(s)	1135, 1630
Eco53kI	GAGCTC	1 cut(s)	403
Eco57I	CTGAAG	3 cut(s)	525, 1299, 1328
Eco88I	CYCGRG	1 cut(s)	404
EcoICRI	GAGCTC	1 cut(s)	403
EcoO109I	RGGNCCY	1 cut(s)	1630
EcoRII	CCWGG	1 cut(s)	1121
EcoT14I	CCWWGG	2 cut(s)	317, 1365
EcoT22I	ATGCAT	2 cut(s)	902, 1844
EcoT38I	GRGCYC	1 cut(s)	405
ErhI	CCWWGG	2 cut(s)	317, 1365
FaeI	CATG	6 cut(s)	810, 876, 900, 1148, 1682, 1711
FaqI	GGGAC	3 cut(s)	814, 868, 921
FatI	CATG	6 cut(s)	806, 872, 896, 1144, 1678, 1707
FauI	CCCGC	1 cut(s)	25
FbaI	TGATCA	3 cut(s)	420, 1330, 1777
Fnu4HI	GCNGC	4 cut(s)	274, 1068, 1119, 1786
FokI	GGATG	8 cut(s)	17, 53, 179, 735, 863, 1501, 1676, 1922
FriOI	GRGCYC	1 cut(s)	405
Fsp4HI	GCNGC	4 cut(s)	274, 1068, 1119, 1786
FspBI	CTAG	3 cut(s)	330, 978, 1319
GlaI	GCGC	2 cut(s)	1683, 1763
GluI	GCNGC	4 cut(s)	274, 1068, 1119, 1786
HaeIII	GGCC	2 cut(s)	322, 1531
HapII	CCGG	2 cut(s)	323, 336
HgaI	GACGC	2 cut(s)	1130, 1627
HhaI	GCGC	2 cut(s)	1684, 1764
Hin1I	GRCGYC	1 cut(s)	910
Hin1II	CATG	6 cut(s)	810, 876, 900, 1148, 1682, 1711
Hin6I	GCGC	2 cut(s)	1682, 1762
HinP1I	GCGC	2 cut(s)	1682, 1762
HincII	GTYRAC	2 cut(s)	577, 604
HindII	GTYRAC	2 cut(s)	577, 604
HindIII	AAGCTT	3 cut(s)	266, 623, 1925
HpaII	CCGG	2 cut(s)	323, 336
HphI	GGTGA	2 cut(s)	364, 550
Hpy166II	GTNNAC	5 cut(s)	577, 604, 1087, 1446, 1816
Hpy188I	TCNGA	7 cut(s)	533, 553, 654, 1279, 1308, 1438, 1621
Hpy188III	TCNNGA	6 cut(s)	686, 1025, 1319, 1383, 1410, 1740
Hpy8I	GTNNAC	5 cut(s)	577, 604, 1087, 1446, 1816
HpyAV	CCTTC	8 cut(s)	59, 144, 575, 626, 1210, 1303, 1546, 1856
HpyCH4III	ACNGT	5 cut(s)	74, 538, 1443, 1549, 1883
HpyCH4IV	ACGT	3 cut(s)	230, 786, 910
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1064, 1791
HpyF3I	CTNAG	4 cut(s)	195, 269, 552, 1620
HpySE526I	ACGT	3 cut(s)	230, 786, 910
Hsp92I	GRCGYC	1 cut(s)	910
Hsp92II	CATG	6 cut(s)	810, 876, 900, 1148, 1682, 1711
HspAI	GCGC	2 cut(s)	1682, 1762
Ksp22I	TGATCA	3 cut(s)	420, 1330, 1777
Kzo9I	GATC	9 cut(s)	420, 482, 682, 706, 1156, 1186, 1330, 1777, 1825
LmnI	GCTCC	1 cut(s)	25
Lsp1109I	GCAGC	4 cut(s)	260, 1079, 1130, 1772
LweI	GCATC	5 cut(s)	34, 628, 713, 739, 1851
MaeI	CTAG	3 cut(s)	330, 978, 1319
MaeII	ACGT	3 cut(s)	230, 786, 910
MaeIII	GTNAC	3 cut(s)	557, 782, 1883
MalI	GATC	9 cut(s)	422, 484, 684, 708, 1158, 1188, 1332, 1779, 1827
MboI	GATC	9 cut(s)	420, 482, 682, 706, 1156, 1186, 1330, 1777, 1825
MboII	GAAGA	5 cut(s)	310, 518, 1260, 1292, 1952
MfeI	CAATTG	3 cut(s)	184, 617, 674
MflI	RGATCY	2 cut(s)	682, 706
MhlI	GDGCHC	2 cut(s)	405, 411
MlyI	GAGTC	1 cut(s)	1339
MmeI	TCCRAC	2 cut(s)	399, 474
Mph1103I	ATGCAT	2 cut(s)	902, 1844
MroXI	GAANNNNTTC	1 cut(s)	1284
MseI	TTAA	8 cut(s)	365, 627, 1062, 1293, 1460, 1517, 1758, 1803
MspA1I	CMGCKG	3 cut(s)	32, 1357, 1785
MspCI	CTTAAG	1 cut(s)	1459
MspI	CCGG	2 cut(s)	323, 336
MspR9I	CCNGG	1 cut(s)	1123
MunI	CAATTG	3 cut(s)	184, 617, 674
MvaI	CCWGG	1 cut(s)	1123
MwoI	GCNNNNNNNGC	2 cut(s)	1064, 1791
NdeII	GATC	9 cut(s)	420, 482, 682, 706, 1156, 1186, 1330, 1777, 1825
NlaIII	CATG	6 cut(s)	810, 876, 900, 1148, 1682, 1711
NlaIV	GGNNCC	4 cut(s)	27, 475, 684, 1203
NmuCI	GTSAC	1 cut(s)	782
NsiI	ATGCAT	2 cut(s)	902, 1844
NspI	RCATGY	4 cut(s)	810, 900, 1682, 1711
PaeI	GCATGC	2 cut(s)	1682, 1711
PaeR7I	CTCGAG	1 cut(s)	404
PdmI	GAANNNNTTC	1 cut(s)	1284
PfeI	GAWTC	9 cut(s)	121, 155, 371, 548, 587, 863, 1021, 1379, 1717
PflMI	CCANNNNNTGG	1 cut(s)	381
PinAI	ACCGGT	1 cut(s)	335
PkrI	GCNGC	4 cut(s)	275, 1069, 1120, 1787
PleI	GAGTC	1 cut(s)	1339
PpsI	GAGTC	1 cut(s)	1339
Ppu21I	YACGTR	1 cut(s)	231
PpuMI	RGGWCCY	1 cut(s)	1630
PshBI	ATTAAT	1 cut(s)	1803
PsiI	TTATAA	1 cut(s)	447
Psp124BI	GAGCTC	1 cut(s)	405
Psp5II	RGGWCCY	1 cut(s)	1630
Psp6I	CCWGG	1 cut(s)	1121
PspGI	CCWGG	1 cut(s)	1121
PspN4I	GGNNCC	4 cut(s)	27, 475, 684, 1203
PspPI	GGNCC	3 cut(s)	1135, 1529, 1630
PspPPI	RGGWCCY	1 cut(s)	1630
PspXI	VCTCGAGB	1 cut(s)	404
PstI	CTGCAG	3 cut(s)	278, 1344, 1790
PsuI	RGATCY	2 cut(s)	682, 706
PvuII	CAGCTG	2 cut(s)	1357, 1785
RsaI	GTAC	7 cut(s)	257, 427, 513, 1300, 1445, 1493, 1823
RsaNI	GTAC	7 cut(s)	256, 426, 512, 1299, 1444, 1492, 1822
SacI	GAGCTC	1 cut(s)	405
SaqAI	TTAA	8 cut(s)	365, 627, 1062, 1293, 1460, 1517, 1758, 1803
SatI	GCNGC	4 cut(s)	274, 1068, 1119, 1786
Sau3AI	GATC	9 cut(s)	420, 482, 682, 706, 1156, 1186, 1330, 1777, 1825
Sau96I	GGNCC	3 cut(s)	1135, 1529, 1630
ScaI	AGTACT	1 cut(s)	1300
SchI	GAGTC	1 cut(s)	1339
ScrFI	CCNGG	1 cut(s)	1123
SduI	GDGCHC	2 cut(s)	405, 411
SfaNI	GCATC	5 cut(s)	34, 628, 713, 739, 1851
SfcI	CTRYAG	3 cut(s)	274, 1340, 1786
Sfr274I	CTCGAG	1 cut(s)	404
SinI	GGWCC	2 cut(s)	1135, 1630
SlaI	CTCGAG	1 cut(s)	404
SmlI	CTYRAG	4 cut(s)	404, 727, 1390, 1459
SmoI	CTYRAG	4 cut(s)	404, 727, 1390, 1459
SphI	GCATGC	2 cut(s)	1682, 1711
SsiI	CCGC	2 cut(s)	32, 1195
SspMI	CTAG	3 cut(s)	330, 978, 1319
SstI	GAGCTC	1 cut(s)	405
StyD4I	CCNGG	1 cut(s)	1121
StyI	CCWWGG	2 cut(s)	317, 1365
TaaI	ACNGT	5 cut(s)	74, 538, 1443, 1549, 1883
TaiI	ACGT	3 cut(s)	233, 789, 913
TaqI	TCGA	4 cut(s)	153, 405, 1189, 1524
TatI	WGTACW	5 cut(s)	425, 511, 1298, 1443, 1491
TfiI	GAWTC	9 cut(s)	121, 155, 371, 548, 587, 863, 1021, 1379, 1717
Tru1I	TTAA	8 cut(s)	365, 627, 1062, 1293, 1460, 1517, 1758, 1803
Tru9I	TTAA	8 cut(s)	365, 627, 1062, 1293, 1460, 1517, 1758, 1803
TscAI	CASTG	4 cut(s)	787, 852, 1554, 1795
TseFI	GTSAC	1 cut(s)	782
TseI	GCWGC	4 cut(s)	273, 1067, 1118, 1785
Tsp45I	GTSAC	1 cut(s)	782
TspDTI	ATGAA	3 cut(s)	21, 1032, 1260
TspGWI	ACGGA	1 cut(s)	38
TspRI	CASTG	4 cut(s)	787, 852, 1554, 1795
Van91I	CCANNNNNTGG	1 cut(s)	381
Vha464I	CTTAAG	1 cut(s)	1459
VpaK11BI	GGWCC	2 cut(s)	1135, 1630
VspI	ATTAAT	1 cut(s)	1803
XapI	RAATTY	8 cut(s)	440, 655, 733, 820, 1030, 1109, 1283, 1313
XbaI	TCTAGA	1 cut(s)	1318
XceI	RCATGY	4 cut(s)	810, 900, 1682, 1711
XhoI	CTCGAG	1 cut(s)	404
XmnI	GAANNNNTTC	1 cut(s)	1284
XspI	CTAG	3 cut(s)	330, 978, 1319
ZraI	GACGTC	1 cut(s)	911
ZrmI	AGTACT	1 cut(s)	1300
Zsp2I	ATGCAT	2 cut(s)	902, 1844

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.