plant mutator transposase zinc finger
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FAR1 | PF03101 | 110 - 194 | 1.2e-13 | FAR1 DNA-binding domain |
| ZSWIM1-3_RNaseH-like | PF21056 | 284 - 398 | 1.3e-08 | Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain |
| MULE | PF10551 | 315 - 409 | 2e-36 | MULE transposase domain |
| Transposase_mut | PF00872 | 334 - 495 | 5e-08 | Transposase, Mutator family |
| SWIM | PF04434 | 605 - 636 | 3.8e-06 | SWIM zinc finger |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 687, 1251 |
| Acc36I | ACCTGC | 1 cut(s) | 506 |
| AccB1I | GGYRCC | 1 cut(s) | 1414 |
| AccBSI | CCGCTC | 1 cut(s) | 2159 |
| AccI | GTMKAC | 2 cut(s) | 1885, 2236 |
| AccII | CGCG | 1 cut(s) | 311 |
| AciI | CCGC | 3 cut(s) | 200, 311, 2159 |
| AclI | AACGTT | 1 cut(s) | 1327 |
| AclWI | GGATC | 2 cut(s) | 321, 2204 |
| AcoI | YGGCCR | 1 cut(s) | 1495 |
| AcsI | RAATTY | 8 cut(s) | 31, 104, 547, 844, 932, 1436, 1670, 2508 |
| AcuI | CTGAAG | 3 cut(s) | 132, 216, 1332 |
| AcvI | CACGTG | 2 cut(s) | 52, 1501 |
| AfaI | GTAC | 5 cut(s) | 439, 965, 980, 1754, 2708 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 290, 669, 1004, 1080, 1984 |
| AflII | CTTAAG | 1 cut(s) | 467 |
| AjnI | CCWGG | 2 cut(s) | 1094, 2664 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 880, 912 |
| Alw21I | GWGCWC | 1 cut(s) | 1274 |
| Alw26I | GTCTC | 2 cut(s) | 340, 1396 |
| AlwI | GGATC | 2 cut(s) | 321, 2204 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1589 |
| AoxI | GGCC | 1 cut(s) | 1495 |
| ApeKI | GCWGC | 1 cut(s) | 1854 |
| ApoI | RAATTY | 8 cut(s) | 31, 104, 547, 844, 932, 1436, 1670, 2508 |
| AspLEI | GCGC | 3 cut(s) | 428, 774, 1894 |
| AspS9I | GGNCC | 3 cut(s) | 274, 1813, 2420 |
| AsuHPI | GGTGA | 4 cut(s) | 542, 778, 950, 2181 |
| AsuII | TTCGAA | 1 cut(s) | 1604 |
| AvaII | GGWCC | 3 cut(s) | 274, 1813, 2420 |
| BalI | TGGCCA | 1 cut(s) | 1497 |
| BanI | GGYRCC | 1 cut(s) | 1414 |
| BanII | GRGCYC | 1 cut(s) | 1274 |
| BbrPI | CACGTG | 2 cut(s) | 52, 1501 |
| BbsI | GAAGAC | 2 cut(s) | 1802, 2326 |
| Bbv12I | GWGCWC | 1 cut(s) | 1274 |
| BbvI | GCAGC | 1 cut(s) | 1841 |
| BccI | CCATC | 8 cut(s) | 389, 1487, 1947, 2109, 2147, 2284, 2411, 2553 |
| BciT130I | CCWGG | 2 cut(s) | 1096, 2666 |
| BclI | TGATCA | 2 cut(s) | 562, 1776 |
| BcoDI | GTCTC | 2 cut(s) | 340, 1396 |
| BfaI | CTAG | 2 cut(s) | 2163, 2256 |
| BfmI | CTRYAG | 2 cut(s) | 801, 1581 |
| BfoI | RGCGCY | 1 cut(s) | 775 |
| BfrI | CTTAAG | 1 cut(s) | 467 |
| BfuAI | ACCTGC | 1 cut(s) | 506 |
| BglII | AGATCT | 1 cut(s) | 2033 |
| BisI | GCNGC | 2 cut(s) | 1855, 2160 |
| BlpI | GCTNAGC | 1 cut(s) | 1764 |
| BlsI | GCNGC | 2 cut(s) | 1856, 2161 |
| Bme1390I | CCNGG | 2 cut(s) | 1096, 2666 |
| Bme18I | GGWCC | 3 cut(s) | 274, 1813, 2420 |
| BmgT120I | GGNCC | 3 cut(s) | 274, 1813, 2420 |
| BmiI | GGNNCC | 2 cut(s) | 1230, 1416 |
| BmrFI | CCNGG | 2 cut(s) | 1096, 2666 |
| BmrI | ACTGGG | 1 cut(s) | 17 |
| BmsI | GCATC | 7 cut(s) | 178, 784, 895, 1964, 2034, 2109, 2389 |
| BmuI | ACTGGG | 1 cut(s) | 17 |
| BpiI | GAAGAC | 2 cut(s) | 1802, 2326 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1764 |
| Bpu14I | TTCGAA | 1 cut(s) | 1604 |
| BpuEI | CTTGAG | 1 cut(s) | 270 |
| BsaAI | YACGTR | 2 cut(s) | 52, 1501 |
| BsaBI | GATNNNNATC | 1 cut(s) | 567 |
| BsaJI | CCNNGG | 2 cut(s) | 2388, 2665 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 290, 669, 1004, 1080, 1984 |
| Bse1I | ACTGG | 4 cut(s) | 12, 362, 1816, 2690 |
| Bse8I | GATNNNNATC | 1 cut(s) | 567 |
| BseBI | CCWGG | 2 cut(s) | 1096, 2666 |
| BseDI | CCNNGG | 2 cut(s) | 2388, 2665 |
| BseGI | GGATG | 6 cut(s) | 799, 1046, 1969, 2124, 2545, 2593 |
| BseJI | GATNNNNATC | 1 cut(s) | 567 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 290, 669, 1004, 1080, 1984 |
| BseMII | CTCAG | 4 cut(s) | 848, 1326, 1755, 2593 |
| BseNI | ACTGG | 4 cut(s) | 12, 362, 1816, 2690 |
| BseXI | GCAGC | 1 cut(s) | 1841 |
| Bsh1236I | CGCG | 1 cut(s) | 311 |
| BshFI | GGCC | 1 cut(s) | 1497 |
| BshNI | GGYRCC | 1 cut(s) | 1414 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1274 |
| BsiSI | CCGG | 1 cut(s) | 663 |
| BslFI | GGGAC | 2 cut(s) | 250, 2589 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 290, 669, 1004, 1080, 1984 |
| BsmAI | GTCTC | 2 cut(s) | 340, 1396 |
| BsmFI | GGGAC | 2 cut(s) | 250, 2589 |
| BsmI | GAATGC | 3 cut(s) | 844, 1486, 1552 |
| BsnI | GGCC | 1 cut(s) | 1497 |
| Bsp119I | TTCGAA | 1 cut(s) | 1604 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1274 |
| Bsp1407I | TGTACA | 1 cut(s) | 2706 |
| Bsp143I | GATC | 9 cut(s) | 297, 313, 374, 431, 562, 1141, 1776, 2033, 2209 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1764 |
| Bsp19I | CCATGG | 1 cut(s) | 2388 |
| BspACI | CCGC | 3 cut(s) | 200, 311, 2159 |
| BspANI | GGCC | 1 cut(s) | 1497 |
| BspCNI | CTCAG | 4 cut(s) | 847, 1327, 1756, 2592 |
| BspFNI | CGCG | 1 cut(s) | 311 |
| BspHI | TCATGA | 1 cut(s) | 1912 |
| BspLI | GGNNCC | 2 cut(s) | 1230, 1416 |
| BspMAI | CTGCAG | 2 cut(s) | 805, 1585 |
| BspMI | ACCTGC | 1 cut(s) | 506 |
| BspPI | GGATC | 2 cut(s) | 321, 2204 |
| BspQI | GCTCTTC | 1 cut(s) | 1279 |
| BspT104I | TTCGAA | 1 cut(s) | 1604 |
| BspT107I | GGYRCC | 1 cut(s) | 1414 |
| BspTI | CTTAAG | 1 cut(s) | 467 |
| BsrBI | CCGCTC | 1 cut(s) | 2159 |
| BsrGI | TGTACA | 1 cut(s) | 2706 |
| BsrI | ACTGG | 4 cut(s) | 12, 362, 1816, 2690 |
| BssECI | CCNNGG | 2 cut(s) | 2388, 2665 |
| BssMI | GATC | 9 cut(s) | 297, 313, 374, 431, 562, 1141, 1776, 2033, 2209 |
| BssNAI | GTATAC | 1 cut(s) | 2237 |
| BssT1I | CCWWGG | 1 cut(s) | 2388 |
| Bst1107I | GTATAC | 1 cut(s) | 2237 |
| Bst2UI | CCWGG | 2 cut(s) | 1096, 2666 |
| Bst4CI | ACNGT | 3 cut(s) | 1801, 2003, 2187 |
| Bst6I | CTCTTC | 3 cut(s) | 1279, 1606, 2220 |
| BstAFI | CTTAAG | 1 cut(s) | 467 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1854 |
| BstAUI | TGTACA | 1 cut(s) | 2706 |
| BstBAI | YACGTR | 2 cut(s) | 52, 1501 |
| BstBI | TTCGAA | 1 cut(s) | 1604 |
| BstC8I | GCNNGC | 6 cut(s) | 827, 831, 1101, 1368, 2516, 2520 |
| BstDEI | CTNAG | 6 cut(s) | 509, 834, 1335, 1764, 2579, 2619 |
| BstDSI | CCRYGG | 1 cut(s) | 2388 |
| BstF5I | GGATG | 6 cut(s) | 799, 1046, 1969, 2124, 2545, 2593 |
| BstFNI | CGCG | 1 cut(s) | 311 |
| BstH2I | RGCGCY | 1 cut(s) | 775 |
| BstHHI | GCGC | 3 cut(s) | 428, 774, 1894 |
| BstKTI | GATC | 9 cut(s) | 300, 316, 377, 434, 565, 1144, 1779, 2036, 2212 |
| BstMAI | GTCTC | 2 cut(s) | 340, 1396 |
| BstMBI | GATC | 9 cut(s) | 297, 313, 374, 431, 562, 1141, 1776, 2033, 2209 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 197, 839, 1854 |
| BstNI | CCWGG | 2 cut(s) | 1096, 2666 |
| BstNSI | RCATGY | 3 cut(s) | 829, 1892, 2518 |
| BstSCI | CCNGG | 2 cut(s) | 1094, 2664 |
| BstSFI | CTRYAG | 2 cut(s) | 801, 1581 |
| BstUI | CGCG | 1 cut(s) | 311 |
| BstV1I | GCAGC | 1 cut(s) | 1841 |
| BstV2I | GAAGAC | 2 cut(s) | 1802, 2326 |
| BstX2I | RGATCY | 1 cut(s) | 2033 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2417 |
| BstYI | RGATCY | 1 cut(s) | 2033 |
| BstZ17I | GTATAC | 1 cut(s) | 2237 |
| BsuRI | GGCC | 1 cut(s) | 1497 |
| BtgI | CCRYGG | 1 cut(s) | 2388 |
| BtsCI | GGATG | 6 cut(s) | 799, 1046, 1969, 2124, 2545, 2593 |
| BtsI | GCAGTG | 1 cut(s) | 798 |
| BtsIMutI | CAGTG | 5 cut(s) | 5, 192, 369, 699, 798 |
| BveI | ACCTGC | 1 cut(s) | 506 |
| Cac8I | GCNNGC | 6 cut(s) | 827, 831, 1101, 1368, 2516, 2520 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1589 |
| CciI | TCATGA | 1 cut(s) | 1912 |
| CfoI | GCGC | 3 cut(s) | 428, 774, 1894 |
| Cfr13I | GGNCC | 3 cut(s) | 274, 1813, 2420 |
| Csp6I | GTAC | 5 cut(s) | 438, 964, 979, 1753, 2707 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 243, 278 |
| CviQI | GTAC | 5 cut(s) | 438, 964, 979, 1753, 2707 |
| DdeI | CTNAG | 6 cut(s) | 509, 834, 1335, 1764, 2579, 2619 |
| DpnI | GATC | 9 cut(s) | 299, 315, 376, 433, 564, 1143, 1778, 2035, 2211 |
| DpnII | GATC | 9 cut(s) | 297, 313, 374, 431, 562, 1141, 1776, 2033, 2209 |
| DraI | TTTAAA | 2 cut(s) | 1360, 1521 |
| EaeI | YGGCCR | 1 cut(s) | 1495 |
| Eam1104I | CTCTTC | 3 cut(s) | 1279, 1606, 2220 |
| EarI | CTCTTC | 3 cut(s) | 1279, 1606, 2220 |
| Ecl136II | GAGCTC | 1 cut(s) | 1272 |
| Eco130I | CCWWGG | 1 cut(s) | 2388 |
| Eco24I | GRGCYC | 1 cut(s) | 1274 |
| Eco47I | GGWCC | 3 cut(s) | 274, 1813, 2420 |
| Eco53kI | GAGCTC | 1 cut(s) | 1272 |
| Eco57I | CTGAAG | 3 cut(s) | 132, 216, 1332 |
| Eco72I | CACGTG | 2 cut(s) | 52, 1501 |
| EcoICRI | GAGCTC | 1 cut(s) | 1272 |
| EcoRI | GAATTC | 2 cut(s) | 547, 932 |
| EcoRII | CCWGG | 2 cut(s) | 1094, 2664 |
| EcoT14I | CCWWGG | 1 cut(s) | 2388 |
| EcoT22I | ATGCAT | 4 cut(s) | 1486, 1552, 2124, 2718 |
| EcoT38I | GRGCYC | 1 cut(s) | 1274 |
| ErhI | CCWWGG | 1 cut(s) | 2388 |
| FaqI | GGGAC | 2 cut(s) | 250, 2589 |
| FbaI | TGATCA | 2 cut(s) | 562, 1776 |
| FblI | GTMKAC | 2 cut(s) | 1885, 2236 |
| Fnu4HI | GCNGC | 2 cut(s) | 1855, 2160 |
| FokI | GGATG | 6 cut(s) | 806, 1053, 1976, 2131, 2532, 2580 |
| FriOI | GRGCYC | 1 cut(s) | 1274 |
| Fsp4HI | GCNGC | 2 cut(s) | 1855, 2160 |
| FspBI | CTAG | 2 cut(s) | 2163, 2256 |
| GlaI | GCGC | 3 cut(s) | 427, 773, 1893 |
| GluI | GCNGC | 2 cut(s) | 1855, 2160 |
| HaeII | RGCGCY | 1 cut(s) | 775 |
| HaeIII | GGCC | 1 cut(s) | 1497 |
| HapII | CCGG | 1 cut(s) | 663 |
| HhaI | GCGC | 3 cut(s) | 428, 774, 1894 |
| Hin6I | GCGC | 3 cut(s) | 426, 772, 1892 |
| HinP1I | GCGC | 3 cut(s) | 426, 772, 1892 |
| HincII | GTYRAC | 3 cut(s) | 676, 1455, 2672 |
| HindII | GTYRAC | 3 cut(s) | 676, 1455, 2672 |
| HindIII | AAGCTT | 3 cut(s) | 557, 641, 1387 |
| HinfI | GANTC | 9 cut(s) | 580, 1070, 1262, 1298, 1586, 1592, 2084, 2577, 2615 |
| HpaII | CCGG | 1 cut(s) | 663 |
| HphI | GGTGA | 4 cut(s) | 542, 778, 950, 2181 |
| Hpy188I | TCNGA | 8 cut(s) | 187, 837, 1312, 1591, 1776, 1950, 2038, 2089 |
| Hpy188III | TCNNGA | 6 cut(s) | 354, 614, 1145, 1232, 1913, 2730 |
| HpyAV | CCTTC | 4 cut(s) | 74, 379, 782, 1954 |
| HpyCH4III | ACNGT | 3 cut(s) | 1801, 2003, 2187 |
| HpyCH4IV | ACGT | 5 cut(s) | 51, 962, 1327, 1500, 2345 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 197, 839, 1854 |
| HpyF3I | CTNAG | 6 cut(s) | 509, 834, 1335, 1764, 2579, 2619 |
| HpySE526I | ACGT | 5 cut(s) | 51, 962, 1327, 1500, 2345 |
| HspAI | GCGC | 3 cut(s) | 426, 772, 1892 |
| Ksp22I | TGATCA | 2 cut(s) | 562, 1776 |
| Kzo9I | GATC | 9 cut(s) | 297, 313, 374, 431, 562, 1141, 1776, 2033, 2209 |
| LguI | GCTCTTC | 1 cut(s) | 1279 |
| LmnI | GCTCC | 6 cut(s) | 1000, 1126, 1534, 2134, 2156, 2479 |
| Lsp1109I | GCAGC | 1 cut(s) | 1841 |
| LweI | GCATC | 7 cut(s) | 178, 784, 895, 1964, 2034, 2109, 2389 |
| MaeI | CTAG | 2 cut(s) | 2163, 2256 |
| MaeII | ACGT | 5 cut(s) | 51, 962, 1327, 1500, 2345 |
| MaeIII | GTNAC | 4 cut(s) | 946, 1712, 1997, 2187 |
| MalI | GATC | 9 cut(s) | 299, 315, 376, 433, 564, 1143, 1778, 2035, 2211 |
| MbiI | CCGCTC | 1 cut(s) | 2159 |
| MboI | GATC | 9 cut(s) | 297, 313, 374, 431, 562, 1141, 1776, 2033, 2209 |
| MfeI | CAATTG | 1 cut(s) | 1849 |
| MflI | RGATCY | 1 cut(s) | 2033 |
| MhlI | GDGCHC | 1 cut(s) | 1274 |
| MlsI | TGGCCA | 1 cut(s) | 1497 |
| MluNI | TGGCCA | 1 cut(s) | 1497 |
| MlyI | GAGTC | 6 cut(s) | 589, 1064, 1271, 1292, 2571, 2624 |
| MmeI | TCCRAC | 2 cut(s) | 271, 608 |
| Mox20I | TGGCCA | 1 cut(s) | 1497 |
| Mph1103I | ATGCAT | 4 cut(s) | 1486, 1552, 2124, 2718 |
| MscI | TGGCCA | 1 cut(s) | 1497 |
| MslI | CAYNNNNRTG | 5 cut(s) | 570, 1375, 2415, 2550, 2655 |
| Msp20I | TGGCCA | 1 cut(s) | 1497 |
| MspCI | CTTAAG | 1 cut(s) | 467 |
| MspI | CCGG | 1 cut(s) | 663 |
| MspR9I | CCNGG | 2 cut(s) | 1096, 2666 |
| MunI | CAATTG | 1 cut(s) | 1849 |
| Mva1269I | GAATGC | 3 cut(s) | 844, 1486, 1552 |
| MvaI | CCWGG | 2 cut(s) | 1096, 2666 |
| MvnI | CGCG | 1 cut(s) | 311 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 197, 839, 1854 |
| NcoI | CCATGG | 1 cut(s) | 2388 |
| NdeII | GATC | 9 cut(s) | 297, 313, 374, 431, 562, 1141, 1776, 2033, 2209 |
| NlaIV | GGNNCC | 2 cut(s) | 1230, 1416 |
| NmuCI | GTSAC | 2 cut(s) | 1712, 2187 |
| NsiI | ATGCAT | 4 cut(s) | 1486, 1552, 2124, 2718 |
| NspI | RCATGY | 3 cut(s) | 829, 1892, 2518 |
| NspV | TTCGAA | 1 cut(s) | 1604 |
| PaeI | GCATGC | 2 cut(s) | 829, 2518 |
| PagI | TCATGA | 1 cut(s) | 1912 |
| PciSI | GCTCTTC | 1 cut(s) | 1279 |
| PctI | GAATGC | 3 cut(s) | 844, 1486, 1552 |
| PfeI | GAWTC | 3 cut(s) | 1586, 1592, 2084 |
| PflFI | GACNNNGTC | 1 cut(s) | 2580 |
| PkrI | GCNGC | 2 cut(s) | 1856, 2161 |
| PleI | GAGTC | 6 cut(s) | 588, 1064, 1270, 1292, 2571, 2623 |
| PmaCI | CACGTG | 2 cut(s) | 52, 1501 |
| PmlI | CACGTG | 2 cut(s) | 52, 1501 |
| PpsI | GAGTC | 6 cut(s) | 588, 1064, 1270, 1292, 2571, 2623 |
| Ppu21I | YACGTR | 2 cut(s) | 52, 1501 |
| PsiI | TTATAA | 2 cut(s) | 687, 1251 |
| Psp124BI | GAGCTC | 1 cut(s) | 1274 |
| Psp1406I | AACGTT | 1 cut(s) | 1327 |
| Psp6I | CCWGG | 2 cut(s) | 1094, 2664 |
| PspCI | CACGTG | 2 cut(s) | 52, 1501 |
| PspGI | CCWGG | 2 cut(s) | 1094, 2664 |
| PspN4I | GGNNCC | 2 cut(s) | 1230, 1416 |
| PspPI | GGNCC | 3 cut(s) | 274, 1813, 2420 |
| PstI | CTGCAG | 2 cut(s) | 805, 1585 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1589 |
| PsuI | RGATCY | 1 cut(s) | 2033 |
| PsyI | GACNNNGTC | 1 cut(s) | 2580 |
| RsaI | GTAC | 5 cut(s) | 439, 965, 980, 1754, 2708 |
| RsaNI | GTAC | 5 cut(s) | 438, 964, 979, 1753, 2707 |
| RseI | CAYNNNNRTG | 5 cut(s) | 570, 1375, 2415, 2550, 2655 |
| SacI | GAGCTC | 1 cut(s) | 1274 |
| SapI | GCTCTTC | 1 cut(s) | 1279 |
| SatI | GCNGC | 2 cut(s) | 1855, 2160 |
| Sau3AI | GATC | 9 cut(s) | 297, 313, 374, 431, 562, 1141, 1776, 2033, 2209 |
| Sau96I | GGNCC | 3 cut(s) | 274, 1813, 2420 |
| SchI | GAGTC | 6 cut(s) | 589, 1064, 1271, 1292, 2571, 2624 |
| ScrFI | CCNGG | 2 cut(s) | 1096, 2666 |
| SduI | GDGCHC | 1 cut(s) | 1274 |
| SfaNI | GCATC | 7 cut(s) | 178, 784, 895, 1964, 2034, 2109, 2389 |
| SfcI | CTRYAG | 2 cut(s) | 801, 1581 |
| SfuI | TTCGAA | 1 cut(s) | 1604 |
| SinI | GGWCC | 3 cut(s) | 274, 1813, 2420 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 570, 1375, 2415, 2550, 2655 |
| SmlI | CTYRAG | 2 cut(s) | 285, 467 |
| SmoI | CTYRAG | 2 cut(s) | 285, 467 |
| SphI | GCATGC | 2 cut(s) | 829, 2518 |
| SsiI | CCGC | 3 cut(s) | 200, 311, 2159 |
| SspMI | CTAG | 2 cut(s) | 2163, 2256 |
| SstI | GAGCTC | 1 cut(s) | 1274 |
| StyD4I | CCNGG | 2 cut(s) | 1094, 2664 |
| StyI | CCWWGG | 1 cut(s) | 2388 |
| TaaI | ACNGT | 3 cut(s) | 1801, 2003, 2187 |
| TaiI | ACGT | 5 cut(s) | 54, 965, 1330, 1503, 2348 |
| TaqI | TCGA | 4 cut(s) | 430, 1192, 1604, 2584 |
| TatI | WGTACW | 1 cut(s) | 2706 |
| TauI | GCSGC | 1 cut(s) | 2162 |
| TfiI | GAWTC | 3 cut(s) | 1586, 1592, 2084 |
| TscAI | CASTG | 5 cut(s) | 12, 199, 369, 699, 805 |
| TseFI | GTSAC | 2 cut(s) | 1712, 2187 |
| TseI | GCWGC | 1 cut(s) | 1854 |
| Tsp45I | GTSAC | 2 cut(s) | 1712, 2187 |
| TspRI | CASTG | 5 cut(s) | 12, 199, 369, 699, 805 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2580 |
| Vha464I | CTTAAG | 1 cut(s) | 467 |
| VpaK11BI | GGWCC | 3 cut(s) | 274, 1813, 2420 |
| XapI | RAATTY | 8 cut(s) | 31, 104, 547, 844, 932, 1436, 1670, 2508 |
| XceI | RCATGY | 3 cut(s) | 829, 1892, 2518 |
| XmiI | GTMKAC | 2 cut(s) | 1885, 2236 |
| XspI | CTAG | 2 cut(s) | 2163, 2256 |
| Zsp2I | ATGCAT | 4 cut(s) | 1486, 1552, 2124, 2718 |