Prupe.2G072300_v2.0.a1

Protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
10935282 .. 10936925
1644 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G072300.1

Sequence Viewer

Length: 1500 bp
ATGGATGAAGTTTCTCTGAACACTGAGCCAGCAGGCGATGTTGATGCTGATGAATTTGAGATTGAAGGAGACTGTGCAATGACAGATTTTATCAGTCAAACTGGCATTATTAAAGGAGAGAACCTTCTCCCTATTGTTGGTGGAATGGAATTTGATTTTTATGAGGATGTGTATTACTTCTACAATTGCTATGCCAACCAACATGGATTTGGGGTTAAGTTTAGGTTAATGGACTCCAACAGGTGGAGAGTTATTAAAGTAGAGATTGAGCAAAACCACTTGATTAGTCCAGCAAGTGGAAAATTTTATAAATCTCACAAGAGCGTAGGGGTTGGAACCAAAAGAGCGTTGCAATTAGATACTCCTGAAGAAGTACAAAAGATCAAGCTATTTAGAACAGTGATCATTGATTCTGAGGGTAATGGAAACATAGATGTTGATGAAGGAGAATCTTGGAATAGAGTTTATTACTCCAATCAATTGAAGCTTAAAGAAGGAGATGACCAAGCAGTTCAGAATTATTTTTCTCGCTTCCAATTAATGGATCCAAACTTCTTTTATGTGGCGGATCTAAATGAGAAAGGATGCTTGGGAAATTTGTTTTGGGCTGATGCAAGAATGGGGGTTGCTTATAGTTATTTATGTGATGTGGTTTCCATTGACACTACATGCTTGGAAAACAAATTTGAAGTCCCGCTGGTGTCATTTATTGGAGTAAATCATCATAGACAATTTGTGGTTCACTTGCAAGCGAGACAATTGAATCATGTACATGGCTGTTTAGAGCTTGGCTGCATATTGGGACGCCCTCCACACGCCATCATTACTTACCAATGCAGAACATTGCAAACTGCCATTTCTGATGTTTTCCTTAGAGCTTCTCATTGTCTTTGCTTATCGCATATAATGCAAAGGGTTCTAGAATATTTGGGAGGATTGTTAAAGTATGAAGCAATTAAAGAATCTTTAAATATAGCAGTTTACTACTCTCTAAGGGTGGAGCAATTCAAAGCAGCTTGGGAGTATATGGTCCAGCCCCATGGAACTAGAGATCATAAATGGCTTCAAGCATTATTTGAAGAGTCCAGTATATTTGAAGGAGACATTTTTGGCAAGAATGTTCCCTGTGCAACCAATGAGGTTGTCTCTTCGTACTTTGAAGAACTTCTTCATAAAGATACTCCTTTGAAGGAATTTTTAGATAAGTATGATCAAGTTCTGCAAACGCATCATCAGCTGGAAGCCTTGGTTGATTTGGATTCAAGAAATTTGAGTTCTATGTTGAAATCAAGATGCCATTTTGAGTTGCAACTCTCCAAAGTGCACACTAATGACAATCTTAGGAAGTTTGAATCGGAGGTAGAGGGAATGTATTCTTGTTTCAGCACTAGTAAGTTAAATGTTGATGGGCCAGTTGTTACCTACATTGTGCAGGAACACACTGAAGTTGATCCTGCACTGAAGTTGATGGAAATAGGAGAGAGAAGAGAGACTGTTTAA

Protein Analysis

500

Amino Acids

57.26

Weight (kDa)

5.14

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000252)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80010
fragaria_vesca FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 309
AccB7I CCANNNNNTGG 3 cut(s) 243, 296, 541
AciI CCGC 2 cut(s) 566, 695
AclWI GGATC 4 cut(s) 539, 552, 576, 1445
AcsI RAATTY 7 cut(s) 53, 149, 302, 595, 683, 1193, 1267
AcuI CTGAAG 3 cut(s) 387, 1464, 1481
AcyI GRCGYC 1 cut(s) 805
AfaI GTAC 3 cut(s) 375, 771, 1154
AfiI CCNNNNNNNGG 4 cut(s) 137, 243, 296, 541
AhlI ACTAGT 1 cut(s) 1388
AjuI GAANNNNNNNTTGG 4 cut(s) 572, 586, 604, 618
AluBI AGCT 6 cut(s) 388, 487, 787, 878, 1016, 1237
AluI AGCT 6 cut(s) 388, 487, 787, 878, 1016, 1237
Alw21I GWGCWC 1 cut(s) 1326
Alw26I GTCTC 5 cut(s) 63, 748, 1095, 1150, 1484
Alw44I GTGCAC 1 cut(s) 1322
AlwI GGATC 4 cut(s) 539, 552, 576, 1445
AoxI GGCC 1 cut(s) 1409
ApaLI GTGCAC 1 cut(s) 1322
ApeKI GCWGC 2 cut(s) 792, 1013
ApoI RAATTY 7 cut(s) 53, 149, 302, 595, 683, 1193, 1267
ArsI GACNNNNNNTTYG 2 cut(s) 675, 707
AseI ATTAAT 1 cut(s) 539
Asp700I GAANNNNTTC 3 cut(s) 1164, 1167, 1372
AspS9I GGNCC 2 cut(s) 1030, 1409
AvaII GGWCC 1 cut(s) 1030
BaeGI GKGCMC 1 cut(s) 1326
BamHI GGATCC 1 cut(s) 544
Bbv12I GWGCWC 1 cut(s) 1326
BbvI GCAGC 2 cut(s) 779, 1025
BccI CCATC 3 cut(s) 827, 1400, 1462
BcgI CGANNNNNNTGC 2 cut(s) 26, 60
BclI TGATCA 2 cut(s) 402, 1210
BcoDI GTCTC 5 cut(s) 63, 748, 1095, 1150, 1484
BcuI ACTAGT 1 cut(s) 1388
BfaI CTAG 3 cut(s) 920, 1047, 1389
BisI GCNGC 2 cut(s) 793, 1014
BlsI GCNGC 2 cut(s) 794, 1015
Bme18I GGWCC 1 cut(s) 1030
BmgT120I GGNCC 2 cut(s) 1030, 1409
BmiI GGNNCC 2 cut(s) 337, 546
BmsI GCATC 5 cut(s) 34, 575, 601, 1237, 1283
BplI GAGNNNNNCTC 2 cut(s) 1130, 1162
BsaHI GRCGYC 1 cut(s) 805
BsaJI CCNNGG 2 cut(s) 1039, 1245
Bsc4I CCNNNNNNNGG 4 cut(s) 137, 243, 296, 541
Bse1I ACTGG 3 cut(s) 106, 1086, 1412
Bse3DI GCAATG 2 cut(s) 84, 842
BseDI CCNNGG 2 cut(s) 1039, 1245
BseGI GGATG 3 cut(s) 10, 172, 590
BseLI CCNNNNNNNGG 4 cut(s) 137, 243, 296, 541
BseMI GCAATG 2 cut(s) 84, 842
BseMII CTCAG 2 cut(s) 15, 405
BseNI ACTGG 3 cut(s) 106, 1086, 1412
BseSI GKGCMC 1 cut(s) 1326
BseXI GCAGC 2 cut(s) 779, 1025
BsgI GTGCAG 2 cut(s) 1440, 1451
BshFI GGCC 1 cut(s) 1411
BsiHKAI GWGCWC 1 cut(s) 1326
BslFI GGGAC 2 cut(s) 677, 816
BslI CCNNNNNNNGG 4 cut(s) 137, 243, 296, 541
BsmAI GTCTC 5 cut(s) 63, 748, 1095, 1150, 1484
BsmFI GGGAC 2 cut(s) 677, 816
BsnI GGCC 1 cut(s) 1411
Bsp1286I GDGCHC 1 cut(s) 1326
Bsp1407I TGTACA 1 cut(s) 769
Bsp143I GATC 7 cut(s) 381, 402, 544, 568, 1051, 1210, 1450
Bsp19I CCATGG 1 cut(s) 1039
BspACI CCGC 2 cut(s) 566, 695
BspANI GGCC 1 cut(s) 1411
BspCNI CTCAG 2 cut(s) 16, 406
BspLI GGNNCC 2 cut(s) 337, 546
BspPI GGATC 4 cut(s) 539, 552, 576, 1445
BsrDI GCAATG 2 cut(s) 84, 842
BsrGI TGTACA 1 cut(s) 769
BsrI ACTGG 3 cut(s) 106, 1086, 1412
BssECI CCNNGG 2 cut(s) 1039, 1245
BssMI GATC 7 cut(s) 381, 402, 544, 568, 1051, 1210, 1450
BssNI GRCGYC 1 cut(s) 805
BssT1I CCWWGG 2 cut(s) 1039, 1245
Bst4CI ACNGT 3 cut(s) 74, 400, 1495
Bst6I CTCTTC 3 cut(s) 1074, 1153, 1480
BstACI GRCGYC 1 cut(s) 805
BstAPI GCANNNNNTGC 1 cut(s) 907
BstAUI TGTACA 1 cut(s) 769
BstC8I GCNNGC 3 cut(s) 30, 34, 750
BstDEI CTNAG 5 cut(s) 24, 414, 872, 992, 1340
BstDSI CCRYGG 1 cut(s) 1039
BstF5I GGATG 3 cut(s) 10, 172, 590
BstKTI GATC 7 cut(s) 384, 405, 547, 571, 1054, 1213, 1453
BstMAI GTCTC 5 cut(s) 63, 748, 1095, 1150, 1484
BstMBI GATC 7 cut(s) 381, 402, 544, 568, 1051, 1210, 1450
BstMWI GCNNNNNNNGC 2 cut(s) 907, 1234
BstNSI RCATGY 1 cut(s) 672
BstSLI GKGCMC 1 cut(s) 1326
BstV1I GCAGC 2 cut(s) 779, 1025
BstX2I RGATCY 2 cut(s) 544, 568
BstXI CCANNNNNNTGG 1 cut(s) 1040
BstYI RGATCY 2 cut(s) 544, 568
BsuRI GGCC 1 cut(s) 1411
BtgI CCRYGG 1 cut(s) 1039
BtgZI GCGATG 1 cut(s) 51
BtsCI GGATG 3 cut(s) 10, 172, 590
BtsIMutI CAGTG 4 cut(s) 21, 405, 1440, 1457
Cac8I GCNNGC 3 cut(s) 30, 34, 750
Cfr13I GGNCC 2 cut(s) 1030, 1409
CseI GACGC 1 cut(s) 813
Csp6I GTAC 3 cut(s) 374, 770, 1153
CviAII CATG 5 cut(s) 203, 669, 767, 773, 1040
CviQI GTAC 3 cut(s) 374, 770, 1153
DdeI CTNAG 5 cut(s) 24, 414, 872, 992, 1340
DpnI GATC 7 cut(s) 383, 404, 546, 570, 1053, 1212, 1452
DpnII GATC 7 cut(s) 381, 402, 544, 568, 1051, 1210, 1450
DraI TTTAAA 1 cut(s) 969
Eam1104I CTCTTC 3 cut(s) 1074, 1153, 1480
EarI CTCTTC 3 cut(s) 1074, 1153, 1480
EciI GGCGGA 1 cut(s) 581
Eco130I CCWWGG 2 cut(s) 1039, 1245
Eco47I GGWCC 1 cut(s) 1030
Eco57I CTGAAG 3 cut(s) 387, 1464, 1481
EcoT14I CCWWGG 2 cut(s) 1039, 1245
ErhI CCWWGG 2 cut(s) 1039, 1245
FaeI CATG 5 cut(s) 206, 672, 770, 776, 1043
FalI AAGNNNNNCTT 2 cut(s) 1152, 1184
FaqI GGGAC 2 cut(s) 677, 816
FatI CATG 5 cut(s) 202, 668, 766, 772, 1039
FauI CCCGC 1 cut(s) 702
FbaI TGATCA 2 cut(s) 402, 1210
Fnu4HI GCNGC 2 cut(s) 793, 1014
FokI GGATG 3 cut(s) 17, 179, 597
Fsp4HI GCNGC 2 cut(s) 793, 1014
FspBI CTAG 3 cut(s) 920, 1047, 1389
GluI GCNGC 2 cut(s) 793, 1014
HaeIII GGCC 1 cut(s) 1411
HgaI GACGC 1 cut(s) 813
Hin1I GRCGYC 1 cut(s) 805
Hin1II CATG 5 cut(s) 206, 672, 770, 776, 1043
HindIII AAGCTT 1 cut(s) 485
HinfI GANTC 8 cut(s) 233, 410, 449, 763, 962, 1082, 1259, 1352
Hpy166II GTNNAC 3 cut(s) 742, 982, 1324
Hpy188I TCNGA 5 cut(s) 18, 415, 516, 862, 1357
Hpy188III TCNNGA 4 cut(s) 365, 920, 1263, 1290
Hpy8I GTNNAC 3 cut(s) 742, 982, 1324
HpyAV CCTTC 6 cut(s) 59, 134, 437, 488, 1091, 1183
HpyCH4III ACNGT 3 cut(s) 74, 400, 1495
HpyF10VI GCNNNNNNNGC 2 cut(s) 907, 1234
HpyF3I CTNAG 5 cut(s) 24, 414, 872, 992, 1340
Hsp92I GRCGYC 1 cut(s) 805
Hsp92II CATG 5 cut(s) 206, 672, 770, 776, 1043
Ksp22I TGATCA 2 cut(s) 402, 1210
Kzo9I GATC 7 cut(s) 381, 402, 544, 568, 1051, 1210, 1450
LmnI GCTCC 1 cut(s) 1000
Lsp1109I GCAGC 2 cut(s) 779, 1025
LweI GCATC 5 cut(s) 34, 575, 601, 1237, 1283
MaeI CTAG 3 cut(s) 920, 1047, 1389
MaeIII GTNAC 1 cut(s) 1417
MalI GATC 7 cut(s) 383, 404, 546, 570, 1053, 1212, 1452
MboI GATC 7 cut(s) 381, 402, 544, 568, 1051, 1210, 1450
MboII GAAGA 6 cut(s) 380, 1091, 1140, 1160, 1172, 1497
MfeI CAATTG 3 cut(s) 184, 479, 758
MflI RGATCY 2 cut(s) 544, 568
MhlI GDGCHC 1 cut(s) 1326
MlyI GAGTC 2 cut(s) 227, 1091
MmeI TCCRAC 2 cut(s) 261, 313
MnlI CCTC 7 cut(s) 157, 409, 819, 926, 1132, 1351, 1357
MroXI GAANNNNTTC 3 cut(s) 1164, 1167, 1372
MslI CAYNNNNRTG 2 cut(s) 771, 1329
MspA1I CMGCKG 2 cut(s) 697, 1237
MunI CAATTG 3 cut(s) 184, 479, 758
MwoI GCNNNNNNNGC 2 cut(s) 907, 1234
NcoI CCATGG 1 cut(s) 1039
NdeII GATC 7 cut(s) 381, 402, 544, 568, 1051, 1210, 1450
NlaIII CATG 5 cut(s) 206, 672, 770, 776, 1043
NlaIV GGNNCC 2 cut(s) 337, 546
NspI RCATGY 1 cut(s) 672
PdmI GAANNNNTTC 3 cut(s) 1164, 1167, 1372
PfeI GAWTC 6 cut(s) 410, 449, 763, 962, 1259, 1352
PflMI CCANNNNNTGG 3 cut(s) 243, 296, 541
PkrI GCNGC 2 cut(s) 794, 1015
PleI GAGTC 2 cut(s) 227, 1090
PpsI GAGTC 2 cut(s) 227, 1090
PshBI ATTAAT 1 cut(s) 539
PsiI TTATAA 1 cut(s) 309
PspN4I GGNNCC 2 cut(s) 337, 546
PspPI GGNCC 2 cut(s) 1030, 1409
PsuI RGATCY 2 cut(s) 544, 568
PvuII CAGCTG 1 cut(s) 1237
RsaI GTAC 3 cut(s) 375, 771, 1154
RsaNI GTAC 3 cut(s) 374, 770, 1153
RseI CAYNNNNRTG 2 cut(s) 771, 1329
SatI GCNGC 2 cut(s) 793, 1014
Sau3AI GATC 7 cut(s) 381, 402, 544, 568, 1051, 1210, 1450
Sau96I GGNCC 2 cut(s) 1030, 1409
SchI GAGTC 2 cut(s) 227, 1091
SduI GDGCHC 1 cut(s) 1326
SfaNI GCATC 5 cut(s) 34, 575, 601, 1237, 1283
SinI GGWCC 1 cut(s) 1030
SmiMI CAYNNNNRTG 2 cut(s) 771, 1329
SpeI ACTAGT 1 cut(s) 1388
SsiI CCGC 2 cut(s) 566, 695
SspI AATATT 1 cut(s) 926
SspMI CTAG 3 cut(s) 920, 1047, 1389
StyI CCWWGG 2 cut(s) 1039, 1245
TaaI ACNGT 3 cut(s) 74, 400, 1495
TatI WGTACW 2 cut(s) 373, 769
TfiI GAWTC 6 cut(s) 410, 449, 763, 962, 1259, 1352
TscAI CASTG 4 cut(s) 28, 405, 1447, 1464
TseI GCWGC 2 cut(s) 792, 1013
TspDTI ATGAA 5 cut(s) 21, 66, 456, 963, 1160
TspRI CASTG 4 cut(s) 28, 405, 1447, 1464
Van91I CCANNNNNTGG 3 cut(s) 243, 296, 541
VneI GTGCAC 1 cut(s) 1322
VpaK11BI GGWCC 1 cut(s) 1030
VspI ATTAAT 1 cut(s) 539
XapI RAATTY 7 cut(s) 53, 149, 302, 595, 683, 1193, 1267
XbaI TCTAGA 1 cut(s) 919
XceI RCATGY 1 cut(s) 672
XcmI CCANNNNNNNNNTGG 1 cut(s) 206
XmnI GAANNNNTTC 3 cut(s) 1164, 1167, 1372
XspI CTAG 3 cut(s) 920, 1047, 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.