Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000252

Physical Location & Seq

Genomic Coordinates Forward (+)

30097336 .. 30100045

Gene Structure 2710 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G80010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGATCGGTAATAGCGTCTACATCTCACCGTCACCGTCACCGTCCGACCACTCTCTCTCGCCCAACCCTAATCTCTGCATCTCGGCGATGGAAGAGCAGCTGGTTGTTGATGATGATGATGATGACCTTGCTCCTCCTCCAATCCCTGATCTCGATATTGACCTTGAAGATGATGATGACGCCTGTTGTCACGGCTTGCTTCATATCGCACCTAATCACGAAGAAGAAACTGGATGCGACGAAAACGCTTTTGCTAATGAAAAGTGTTTGATGGCTCCTCCTCCTACTCCTGGAATGGAGTTCGAGTCCTACGATGATGCTTACAGTTTCTACAACTCATACGCCCGTGAGCTCGGTTTTGCTATCCGCGTCAAGTCCTCCTGGACTAAGCGTAACAGCAAGGAGAAACGTGGTGCTGTCTTGTGTTGCAACTGCCAAGGTTTCAAGCTGCTTAAAGATGCTCACTCCCGGAGAAAGGAGACCCGCACCGGCTGCCAGGCCATGATTCGCCTTCGACTCATCCACTTTGATCGATGGAAAGTTGATCAAGTCAAACTCGACCACAACCACTCCTTTGATCCTCAACGTGCCCACAATTCCAAGTCTCACAAGAAATCCTCCTCCTCAGCTTCTCCTGCAACTAAGACAAATCCCGAACCACCTCCCCATGTCCAAGTCCGGACTATCAAATTGTATCGAACCCTTGCCCTTGACACACCACCCGCTCTTGGAACTTCACTCTCTAGCGGGGAGACCAGCGATCTCAGCCTTGATCACTTCCAATCTTCAAGGCGCTTGGAGCTCAGAGGGGGTTTCAGGGCCTTGCAGGATTTCTTCTTCCAAATTCAGCTTTCCAGCCCCAACTTTCTTTACCTCATGGACCTTGCCGACGACGGGAGTCTCAGGAATGTCTTTTGGATTGACGCTCGAGCTAGGGCTGCATACTCTCACTTTGGCGACGTTCTTCTGTTCGACACCACTTGTTTATCTAACGCATACGAGCTTCCCCTTGTGGCCTTTGTTGGAATTAACCACCATGGAGATACAATCTTGCTCGGCTGTGGTTTGCTTGCTGATCAGAGCTTTGAGACCTATGTCTGGCTCTTCAGAGCGTGGCTAACCTGCATGTTAGGCCGTCCCCCACAGATCTTTATCACGGAACAGTGCAAGGCAATGCGGACCGCTGTCTCTGAAGTTTTTCCAAGGGCTCATCATCGTCTTAGCTTGACCCACGTCCTGCACAACATCTGTCAGAGTGTTGTCCAACTACAAGATTCTGACTTGTTCCCTATGGCACTTAACAGAGTAGTCTACGGTTGTCTCAAGGTCGAAGAATTTGAAACAGCTTGGGAAGAGATGATCATTCGCTTTGGGATGACAAATAACGAGACCATCAGGGACATGTTTCAAGATCGAGAACTCTGGGCTCCAGTTTACCTCAAGGATACATTTTTGGCCGGGGCGCTGACTTTTCCACTGGGAAATGTGGCAGCCCCGTTCATCTTCAGTGGCTATGTTCATGAGAACACATCCCTGAGAGAATTCCTTGAAGGGTACGAATCTTTTCTGGATAAAAAGTACACAAGAGAAGCCTTGTGCGACTCAGAGTCCTTAAAGTTGATCCCCAAGCTCAAAACAACGCACCCCTACGAGTCCCAGATGGCAAAGGTCTTCACAATGGAGATATTTAGAAGGTTCCAAGACGAGGTCTCAGCAATGTCTTCATGTTTTGGAGTAACGCAAGTCCACTCAAACGGGTCGGCCTCCTCGTACGTAGTGAAAGAGAGGGAGGGAGACAAAGTGAGAGACTTTGAGGTCATCTACGAGACAAGTGCAGCAGCACAAGTACGTTGCTTCTGTGTCTGTGGGGGTTTCAGCTTCAATGGGTACCAATGCAGACACGTGCTCCTCCTACTCAGCCACAACGGCTTGCAGGAAGTCCCGCCTCAGTATATACTGCAACGGTGGCGGAAGGACGTGAAACGTCTCTATGTGGCGGAATTTGGGTCAGGTCGTGTGGACATAATGAATCCGGATCAATGGTATGAGCATTTGCACAGAAGAGCGATGCAGGTTGTTGAACAAGGGATGAGATCGAAAGAGCATTGCAGAGCTGCCTGGGAAGCGTTTAGAGAGTGTGCCAATAAGGTCCAATTTGTGACAGAGAAGCCTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

725

Amino Acids

82.56

Weight (kDa)

5.85

Isoelectric Point (pI)

43.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	109 - 193	4.8e-26	FAR1 DNA-binding domain
MULE	PF10551	321 - 415	6.4e-25	MULE transposase domain
SWIM	PF04434	608 - 641	2.9e-06	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80010
fragaria_vesca	FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica	MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica	Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis	pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis	RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata	RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora	Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii	Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa	Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha	Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana	Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1814
Acc36I	ACCTGC	2 cut(s)	1130, 2062
Acc65I	GGTACC	1 cut(s)	1887
AccB1I	GGYRCC	1 cut(s)	1887
AccBSI	CCGCTC	1 cut(s)	725
AccI	GTMKAC	2 cut(s)	18, 1311
AccII	CGCG	1 cut(s)	369
AccIII	TCCGGA	2 cut(s)	678, 2032
AciI	CCGC	9 cut(s)	367, 484, 723, 747, 1177, 1182, 1943, 1969, 1997
AclWI	GGATC	3 cut(s)	572, 1615, 2043
AcoI	YGGCCR	1 cut(s)	1455
AcsI	RAATTY	4 cut(s)	843, 1334, 1541, 2000
AcuI	CTGAAG	3 cut(s)	1090, 1212, 1489
AcvI	CACGTG	1 cut(s)	1903
AcyI	GRCGYC	1 cut(s)	180
AfaI	GTAC	5 cut(s)	1556, 1580, 1772, 1848, 1889
AfiI	CCNNNNNNNGG	6 cut(s)	290, 475, 728, 894, 1098, 1705
AflIII	ACRYGT	2 cut(s)	1401, 1900
AgsI	TTSAA	8 cut(s)	167, 445, 789, 1340, 1409, 1550, 1882, 2081
AhdI	GACNNNNNGTC	1 cut(s)	1606
AjiI	CACGTC	2 cut(s)	1234, 1978
AjnI	CCWGG	4 cut(s)	289, 380, 495, 2117
Alw21I	GWGCWC	3 cut(s)	354, 804, 1908
AlwI	GGATC	3 cut(s)	572, 1615, 2043
Ama87I	CYCGRG	1 cut(s)	927
Aor13HI	TCCGGA	2 cut(s)	678, 2032
AoxI	GGCC	6 cut(s)	498, 819, 1014, 1132, 1455, 1761
ApeKI	GCWGC	8 cut(s)	97, 448, 492, 938, 1490, 1835, 1838, 2114
ApoI	RAATTY	4 cut(s)	843, 1334, 1541, 2000
Asp700I	GAANNNNTTC	2 cut(s)	1197, 1563
Asp718I	GGTACC	1 cut(s)	1887
AspLEI	GCGC	2 cut(s)	795, 1465
AspS9I	GGNCC	4 cut(s)	819, 880, 1179, 2149
AsuC2I	CCSGG	2 cut(s)	469, 1459
AsuHPI	GGTGA	3 cut(s)	18, 24, 30
AvaI	CYCGRG	1 cut(s)	927
AvaII	GGWCC	3 cut(s)	880, 1179, 2149
BaeGI	GKGCMC	1 cut(s)	592
BanI	GGYRCC	1 cut(s)	1887
BanII	GRGCYC	4 cut(s)	354, 804, 1210, 1429
BbrPI	CACGTG	1 cut(s)	1903
BbsI	GAAGAC	2 cut(s)	1663, 1713
Bbv12I	GWGCWC	3 cut(s)	354, 804, 1908
BbvCI	CCTCAGC	1 cut(s)	625
BbvI	GCAGC	8 cut(s)	109, 435, 479, 925, 1502, 1847, 1850, 2101
BccI	CCATC	5 cut(s)	82, 265, 528, 1400, 1654
BceAI	ACGGC	3 cut(s)	208, 1119, 1942
BcgI	CGANNNNNNTGC	2 cut(s)	1814, 1848
BciT130I	CCWGG	4 cut(s)	291, 382, 497, 2119
BciVI	GTATCC	1 cut(s)	1438
BclI	TGATCA	4 cut(s)	544, 772, 1075, 1359
BcnI	CCSGG	2 cut(s)	469, 1459
BfaI	CTAG	2 cut(s)	744, 933
BfoI	RGCGCY	2 cut(s)	796, 1466
BfuAI	ACCTGC	2 cut(s)	1130, 2062
BfuI	GTATCC	1 cut(s)	1438
BglI	GCCNNNNNGGC	1 cut(s)	1926
BglII	AGATCT	1 cut(s)	1146
BisI	GCNGC	8 cut(s)	98, 449, 493, 939, 1491, 1836, 1839, 2115
BlsI	GCNGC	8 cut(s)	99, 450, 494, 940, 1492, 1837, 1840, 2116
Bme1390I	CCNGG	6 cut(s)	291, 382, 469, 497, 1459, 2119
Bme18I	GGWCC	3 cut(s)	880, 1179, 2149
BmeRI	GACNNNNNGTC	1 cut(s)	1606
BmeT110I	CYCGRG	1 cut(s)	927
BmgBI	CACGTC	2 cut(s)	1234, 1978
BmgT120I	GGNCC	4 cut(s)	819, 880, 1179, 2149
BmiI	GGNNCC	4 cut(s)	276, 1428, 1697, 1889
BmrFI	CCNGG	6 cut(s)	291, 382, 469, 497, 1459, 2119
BmrI	ACTGGG	1 cut(s)	1487
BmsI	GCATC	5 cut(s)	87, 224, 307, 448, 2058
BmuI	ACTGGG	1 cut(s)	1487
BoxI	GACNNNNGTC	4 cut(s)	897, 1094, 1184, 1232
BpiI	GAAGAC	2 cut(s)	1663, 1713
BpmI	CTGGAG	1 cut(s)	1413
Bpu10I	CCTNAGC	1 cut(s)	625
BpuEI	CTTGAG	2 cut(s)	1307, 1424
BpuMI	CCSGG	2 cut(s)	469, 1459
Bsa29I	ATCGAT	1 cut(s)	532
BsaAI	YACGTR	2 cut(s)	1774, 1903
BsaBI	GATNNNNATC	1 cut(s)	1151
BsaHI	GRCGYC	1 cut(s)	180
BsaI	GGTCTC	5 cut(s)	473, 746, 1082, 1382, 1714
BsaJI	CCNNGG	5 cut(s)	436, 1036, 1202, 1458, 2118
BsaWI	WCCGGW	2 cut(s)	678, 2032
BsaXI	ACNNNNNCTCC	8 cut(s)	290, 320, 554, 584, 1785, 1815, 1890, 1920
Bsc4I	CCNNNNNNNGG	6 cut(s)	290, 475, 728, 894, 1098, 1705
Bse118I	RCCGGY	1 cut(s)	488
Bse1I	ACTGG	3 cut(s)	235, 1430, 1482
Bse3DI	GCAATG	3 cut(s)	1179, 1722, 2104
Bse8I	GATNNNNATC	1 cut(s)	1151
BseAI	TCCGGA	2 cut(s)	678, 2032
BseBI	CCWGG	4 cut(s)	291, 382, 497, 2119
BseCI	ATCGAT	1 cut(s)	532
BseDI	CCNNGG	5 cut(s)	436, 1036, 1202, 1458, 2118
BseGI	GGATG	5 cut(s)	239, 519, 1380, 1529, 2094
BseJI	GATNNNNATC	1 cut(s)	1151
BseLI	CCNNNNNNNGG	6 cut(s)	290, 475, 728, 894, 1098, 1705
BseMI	GCAATG	3 cut(s)	1179, 1722, 2104
BseMII	CTCAG	9 cut(s)	639, 778, 817, 916, 1526, 1617, 1725, 1930, 1961
BseNI	ACTGG	3 cut(s)	235, 1430, 1482
BseRI	GAGGAG	8 cut(s)	123, 126, 267, 270, 610, 613, 1756, 1898
BseSI	GKGCMC	1 cut(s)	592
BseXI	GCAGC	8 cut(s)	109, 435, 479, 925, 1502, 1847, 1850, 2101
BsgI	GTGCAG	2 cut(s)	1223, 1854
Bsh1236I	CGCG	1 cut(s)	369
BshFI	GGCC	6 cut(s)	500, 821, 1016, 1134, 1457, 1763
BshNI	GGYRCC	1 cut(s)	1887
BshVI	ATCGAT	1 cut(s)	532
BsiHKAI	GWGCWC	3 cut(s)	354, 804, 1908
BsiHKCI	CYCGRG	1 cut(s)	927
BsiSI	CCGG	5 cut(s)	469, 489, 679, 1458, 2033
BsiWI	CGTACG	1 cut(s)	1770
BslFI	GGGAC	4 cut(s)	1122, 1412, 1639, 1925
BslI	CCNNNNNNNGG	6 cut(s)	290, 475, 728, 894, 1098, 1705
BsmBI	CGTCTC	1 cut(s)	1991
BsmFI	GGGAC	4 cut(s)	1122, 1412, 1639, 1925
BsnI	GGCC	6 cut(s)	500, 821, 1016, 1134, 1457, 1763
Bso31I	GGTCTC	5 cut(s)	473, 746, 1082, 1382, 1714
BsoBI	CYCGRG	1 cut(s)	927
Bsp1286I	GDGCHC	6 cut(s)	354, 592, 804, 1210, 1429, 1908
Bsp13I	TCCGGA	2 cut(s)	678, 2032
Bsp19I	CCATGG	1 cut(s)	1036
BspACI	CCGC	9 cut(s)	367, 484, 723, 747, 1177, 1182, 1943, 1969, 1997
BspANI	GGCC	6 cut(s)	500, 821, 1016, 1134, 1457, 1763
BspCNI	CTCAG	9 cut(s)	638, 777, 816, 915, 1527, 1616, 1724, 1929, 1960
BspDI	ATCGAT	1 cut(s)	532
BspEI	TCCGGA	2 cut(s)	678, 2032
BspFNI	CGCG	1 cut(s)	369
BspHI	TCATGA	1 cut(s)	1519
BspLI	GGNNCC	4 cut(s)	276, 1428, 1697, 1889
BspMI	ACCTGC	2 cut(s)	1130, 2062
BspPI	GGATC	3 cut(s)	572, 1615, 2043
BspQI	GCTCTTC	3 cut(s)	87, 1109, 2056
BspT107I	GGYRCC	1 cut(s)	1887
BspTNI	GGTCTC	5 cut(s)	473, 746, 1082, 1382, 1714
BsrBI	CCGCTC	1 cut(s)	725
BsrDI	GCAATG	3 cut(s)	1179, 1722, 2104
BsrFI	RCCGGY	1 cut(s)	488
BsrI	ACTGG	3 cut(s)	235, 1430, 1482
BssAI	RCCGGY	1 cut(s)	488
BssECI	CCNNGG	5 cut(s)	436, 1036, 1202, 1458, 2118
BssNI	GRCGYC	1 cut(s)	180
BssT1I	CCWWGG	3 cut(s)	436, 1036, 1202
Bst2UI	CCWGG	4 cut(s)	291, 382, 497, 2119
Bst4CI	ACNGT	7 cut(s)	30, 36, 42, 326, 1164, 1316, 1965
Bst6I	CTCTTC	4 cut(s)	87, 1109, 1347, 2056
BstACI	GRCGYC	1 cut(s)	180
BstAPI	GCANNNNNTGC	1 cut(s)	492
BstBAI	YACGTR	2 cut(s)	1774, 1903
BstC8I	GCNNGC	3 cut(s)	197, 1071, 1931
BstDSI	CCRYGG	1 cut(s)	1036
BstF5I	GGATG	5 cut(s)	239, 519, 1380, 1529, 2094
BstFNI	CGCG	1 cut(s)	369
BstH2I	RGCGCY	2 cut(s)	796, 1466
BstHHI	GCGC	2 cut(s)	795, 1465
BstMWI	GCNNNNNNNGC	9 cut(s)	492, 635, 765, 799, 938, 1131, 1926, 1966, 2123
BstNI	CCWGG	4 cut(s)	291, 382, 497, 2119
BstNSI	RCATGY	2 cut(s)	1129, 1405
BstPAI	GACNNNNGTC	4 cut(s)	897, 1094, 1184, 1232
BstSCI	CCNGG	6 cut(s)	289, 380, 467, 495, 1457, 2117
BstSLI	GKGCMC	1 cut(s)	592
BstSNI	TACGTA	1 cut(s)	1774
BstUI	CGCG	1 cut(s)	369
BstV1I	GCAGC	8 cut(s)	109, 435, 479, 925, 1502, 1847, 1850, 2101
BstV2I	GAAGAC	2 cut(s)	1663, 1713
BstX2I	RGATCY	1 cut(s)	1146
BstYI	RGATCY	1 cut(s)	1146
Bsu15I	ATCGAT	1 cut(s)	532
BsuI	GTATCC	1 cut(s)	1438
BsuRI	GGCC	6 cut(s)	500, 821, 1016, 1134, 1457, 1763
BsuTUI	ATCGAT	1 cut(s)	532
BtgI	CCRYGG	1 cut(s)	1036
BtgZI	GCGATG	2 cut(s)	101, 2081
BtrI	CACGTC	2 cut(s)	1234, 1978
BtsCI	GGATG	5 cut(s)	239, 519, 1380, 1529, 2094
BtsIMutI	CAGTG	3 cut(s)	1169, 1475, 1513
BveI	ACCTGC	2 cut(s)	1130, 2062
Cac8I	GCNNGC	3 cut(s)	197, 1071, 1931
CciI	TCATGA	1 cut(s)	1519
CfoI	GCGC	2 cut(s)	795, 1465
Cfr10I	RCCGGY	1 cut(s)	488
Cfr13I	GGNCC	4 cut(s)	819, 880, 1179, 2149
ClaI	ATCGAT	1 cut(s)	532
CpoI	CGGWCCG	1 cut(s)	1179
CseI	GACGC	4 cut(s)	4, 188, 358, 932
Csp6I	GTAC	5 cut(s)	1555, 1579, 1771, 1847, 1888
CspI	CGGWCCG	1 cut(s)	1179
CviAII	CATG	8 cut(s)	502, 668, 877, 1037, 1126, 1402, 1520, 1725
CviQI	GTAC	5 cut(s)	1555, 1579, 1771, 1847, 1888
DrdI	GACNNNNNNGTC	1 cut(s)	1814
DriI	GACNNNNNGTC	1 cut(s)	1606
DseDI	GACNNNNNNGTC	1 cut(s)	1814
EaeI	YGGCCR	1 cut(s)	1455
Eam1104I	CTCTTC	4 cut(s)	87, 1109, 1347, 2056
Eam1105I	GACNNNNNGTC	1 cut(s)	1606
EarI	CTCTTC	4 cut(s)	87, 1109, 1347, 2056
EciI	GGCGGA	2 cut(s)	1984, 2012
Ecl136II	GAGCTC	2 cut(s)	352, 802
Eco105I	TACGTA	1 cut(s)	1774
Eco130I	CCWWGG	3 cut(s)	436, 1036, 1202
Eco24I	GRGCYC	4 cut(s)	354, 804, 1210, 1429
Eco31I	GGTCTC	5 cut(s)	473, 746, 1082, 1382, 1714
Eco47I	GGWCC	3 cut(s)	880, 1179, 2149
Eco53kI	GAGCTC	2 cut(s)	352, 802
Eco57I	CTGAAG	3 cut(s)	1090, 1212, 1489
Eco72I	CACGTG	1 cut(s)	1903
Eco88I	CYCGRG	1 cut(s)	927
EcoICRI	GAGCTC	2 cut(s)	352, 802
EcoO109I	RGGNCCY	1 cut(s)	819
EcoRI	GAATTC	1 cut(s)	1541
EcoRII	CCWGG	4 cut(s)	289, 380, 495, 2117
EcoT14I	CCWWGG	3 cut(s)	436, 1036, 1202
EcoT38I	GRGCYC	4 cut(s)	354, 804, 1210, 1429
ErhI	CCWWGG	3 cut(s)	436, 1036, 1202
Esp3I	CGTCTC	1 cut(s)	1991
FaeI	CATG	8 cut(s)	505, 671, 880, 1040, 1129, 1405, 1523, 1728
FaqI	GGGAC	4 cut(s)	1122, 1412, 1639, 1925
FatI	CATG	8 cut(s)	501, 667, 876, 1036, 1125, 1401, 1519, 1724
FauI	CCCGC	4 cut(s)	491, 730, 740, 1950
FbaI	TGATCA	4 cut(s)	544, 772, 1075, 1359
FblI	GTMKAC	2 cut(s)	18, 1311
Fnu4HI	GCNGC	8 cut(s)	98, 449, 493, 939, 1491, 1836, 1839, 2115
FokI	GGATG	5 cut(s)	246, 506, 1387, 1516, 2101
FriOI	GRGCYC	4 cut(s)	354, 804, 1210, 1429
Fsp4HI	GCNGC	8 cut(s)	98, 449, 493, 939, 1491, 1836, 1839, 2115
FspBI	CTAG	2 cut(s)	744, 933
GlaI	GCGC	2 cut(s)	794, 1464
GluI	GCNGC	8 cut(s)	98, 449, 493, 939, 1491, 1836, 1839, 2115
GsuI	CTGGAG	1 cut(s)	1413
HaeII	RGCGCY	2 cut(s)	796, 1466
HaeIII	GGCC	6 cut(s)	500, 821, 1016, 1134, 1457, 1763
HapII	CCGG	5 cut(s)	469, 489, 679, 1458, 2033
HgaI	GACGC	4 cut(s)	4, 188, 358, 932
HhaI	GCGC	2 cut(s)	795, 1465
Hin1I	GRCGYC	1 cut(s)	180
Hin1II	CATG	8 cut(s)	505, 671, 880, 1040, 1129, 1405, 1523, 1728
Hin6I	GCGC	2 cut(s)	793, 1463
HinP1I	GCGC	2 cut(s)	793, 1463
HpaII	CCGG	5 cut(s)	469, 489, 679, 1458, 2033
HphI	GGTGA	3 cut(s)	18, 24, 30
Hpy166II	GTNNAC	6 cut(s)	19, 1312, 1435, 1581, 1747, 2020
Hpy188I	TCNGA	8 cut(s)	46, 806, 1080, 1109, 1192, 1254, 1279, 1606
Hpy8I	GTNNAC	6 cut(s)	19, 1312, 1435, 1581, 1747, 2020
Hpy99I	CGWCG	4 cut(s)	242, 893, 896, 962
HpyAV	CCTTC	4 cut(s)	521, 1544, 1686, 1966
HpyCH4III	ACNGT	7 cut(s)	30, 36, 42, 326, 1164, 1316, 1965
HpyCH4IV	ACGT	9 cut(s)	409, 586, 960, 1233, 1773, 1849, 1902, 1977, 1984
HpyF10VI	GCNNNNNNNGC	9 cut(s)	492, 635, 765, 799, 938, 1131, 1926, 1966, 2123
HpySE526I	ACGT	9 cut(s)	409, 586, 960, 1233, 1773, 1849, 1902, 1977, 1984
Hsp92I	GRCGYC	1 cut(s)	180
Hsp92II	CATG	8 cut(s)	505, 671, 880, 1040, 1129, 1405, 1523, 1728
HspAI	GCGC	2 cut(s)	793, 1463
Kpn2I	TCCGGA	2 cut(s)	678, 2032
KpnI	GGTACC	1 cut(s)	1891
Ksp22I	TGATCA	4 cut(s)	544, 772, 1075, 1359
LguI	GCTCTTC	3 cut(s)	87, 1109, 2056
LmnI	GCTCC	5 cut(s)	136, 280, 799, 1432, 1911
Lsp1109I	GCAGC	8 cut(s)	109, 435, 479, 925, 1502, 1847, 1850, 2101
LweI	GCATC	5 cut(s)	87, 224, 307, 448, 2058
MaeI	CTAG	2 cut(s)	744, 933
MaeII	ACGT	9 cut(s)	409, 586, 960, 1233, 1773, 1849, 1902, 1977, 1984
MaeIII	GTNAC	6 cut(s)	30, 36, 188, 392, 1735, 2158
MbiI	CCGCTC	1 cut(s)	725
MflI	RGATCY	1 cut(s)	1146
MhlI	GDGCHC	6 cut(s)	354, 592, 804, 1210, 1429, 1908
MluCI	AATT	8 cut(s)	595, 689, 843, 1026, 1334, 1541, 2000, 2153
MlyI	GAGTC	6 cut(s)	314, 510, 907, 1595, 1616, 1661
MmeI	TCCRAC	3 cut(s)	69, 1003, 1288
MroI	TCCGGA	2 cut(s)	678, 2032
MroXI	GAANNNNTTC	2 cut(s)	1197, 1563
MseI	TTAA	4 cut(s)	453, 1029, 1299, 1613
MspA1I	CMGCKG	2 cut(s)	100, 1184
MspI	CCGG	5 cut(s)	469, 489, 679, 1458, 2033
MspR9I	CCNGG	6 cut(s)	291, 382, 469, 497, 1459, 2119
MvaI	CCWGG	4 cut(s)	291, 382, 497, 2119
MvnI	CGCG	1 cut(s)	369
MwoI	GCNNNNNNNGC	9 cut(s)	492, 635, 765, 799, 938, 1131, 1926, 1966, 2123
NciI	CCSGG	2 cut(s)	469, 1459
NcoI	CCATGG	1 cut(s)	1036
NlaIII	CATG	8 cut(s)	505, 671, 880, 1040, 1129, 1405, 1523, 1728
NlaIV	GGNNCC	4 cut(s)	276, 1428, 1697, 1889
NmeAIII	GCCGAG	2 cut(s)	62, 1035
NmuCI	GTSAC	4 cut(s)	30, 36, 188, 2158
NspI	RCATGY	2 cut(s)	1129, 1405
PaeR7I	CTCGAG	1 cut(s)	927
PagI	TCATGA	1 cut(s)	1519
PciI	ACATGT	1 cut(s)	1401
PciSI	GCTCTTC	3 cut(s)	87, 1109, 2056
PcsI	WCGNNNNNNNCGW	3 cut(s)	12, 309, 1766
PdmI	GAANNNNTTC	2 cut(s)	1197, 1563
PfeI	GAWTC	4 cut(s)	505, 1274, 1559, 2029
Pfl23II	CGTACG	1 cut(s)	1770
PflFI	GACNNNGTC	1 cut(s)	1706
PfoI	TCCNGGA	3 cut(s)	289, 380, 467
PkrI	GCNGC	8 cut(s)	99, 450, 494, 940, 1492, 1837, 1840, 2116
PleI	GAGTC	6 cut(s)	313, 510, 906, 1595, 1615, 1660
PmaCI	CACGTG	1 cut(s)	1903
PmlI	CACGTG	1 cut(s)	1903
PpsI	GAGTC	6 cut(s)	313, 510, 906, 1595, 1615, 1660
Ppu21I	YACGTR	2 cut(s)	1774, 1903
PscI	ACATGT	1 cut(s)	1401
PshAI	GACNNNNGTC	4 cut(s)	897, 1094, 1184, 1232
Psp124BI	GAGCTC	2 cut(s)	354, 804
Psp6I	CCWGG	4 cut(s)	289, 380, 495, 2117
PspCI	CACGTG	1 cut(s)	1903
PspGI	CCWGG	4 cut(s)	289, 380, 495, 2117
PspLI	CGTACG	1 cut(s)	1770
PspN4I	GGNNCC	4 cut(s)	276, 1428, 1697, 1889
PspPI	GGNCC	4 cut(s)	819, 880, 1179, 2149
PspXI	VCTCGAGB	1 cut(s)	927
PsuI	RGATCY	1 cut(s)	1146
PsyI	GACNNNGTC	1 cut(s)	1706
PvuII	CAGCTG	1 cut(s)	100
RsaI	GTAC	5 cut(s)	1556, 1580, 1772, 1848, 1889
RsaNI	GTAC	5 cut(s)	1555, 1579, 1771, 1847, 1888
Rsr2I	CGGWCCG	1 cut(s)	1179
RsrII	CGGWCCG	1 cut(s)	1179
SacI	GAGCTC	2 cut(s)	354, 804
SapI	GCTCTTC	3 cut(s)	87, 1109, 2056
SaqAI	TTAA	4 cut(s)	453, 1029, 1299, 1613
SatI	GCNGC	8 cut(s)	98, 449, 493, 939, 1491, 1836, 1839, 2115
Sau96I	GGNCC	4 cut(s)	819, 880, 1179, 2149
SchI	GAGTC	6 cut(s)	314, 510, 907, 1595, 1616, 1661
ScrFI	CCNGG	6 cut(s)	291, 382, 469, 497, 1459, 2119
SduI	GDGCHC	6 cut(s)	354, 592, 804, 1210, 1429, 1908
SfaNI	GCATC	5 cut(s)	87, 224, 307, 448, 2058
Sfr274I	CTCGAG	1 cut(s)	927
SinI	GGWCC	3 cut(s)	880, 1179, 2149
SlaI	CTCGAG	1 cut(s)	927
SmlI	CTYRAG	3 cut(s)	927, 1322, 1439
SmoI	CTYRAG	3 cut(s)	927, 1322, 1439
SnaBI	TACGTA	1 cut(s)	1774
Sse9I	AATT	8 cut(s)	595, 689, 843, 1026, 1334, 1541, 2000, 2153
SsiI	CCGC	9 cut(s)	367, 484, 723, 747, 1177, 1182, 1943, 1969, 1997
SspMI	CTAG	2 cut(s)	744, 933
SstI	GAGCTC	2 cut(s)	354, 804
StyD4I	CCNGG	6 cut(s)	289, 380, 467, 495, 1457, 2117
StyI	CCWWGG	3 cut(s)	436, 1036, 1202
TaaI	ACNGT	7 cut(s)	30, 36, 42, 326, 1164, 1316, 1965
TaiI	ACGT	9 cut(s)	412, 589, 963, 1236, 1776, 1852, 1905, 1980, 1987
TasI	AATT	8 cut(s)	595, 689, 843, 1026, 1334, 1541, 2000, 2153
TatI	WGTACW	1 cut(s)	1578
TfiI	GAWTC	4 cut(s)	505, 1274, 1559, 2029
Tru1I	TTAA	4 cut(s)	453, 1029, 1299, 1613
Tru9I	TTAA	4 cut(s)	453, 1029, 1299, 1613
TscAI	CASTG	3 cut(s)	1169, 1482, 1513
TseFI	GTSAC	4 cut(s)	30, 36, 188, 2158
TseI	GCWGC	8 cut(s)	97, 448, 492, 938, 1490, 1835, 1838, 2114
Tsp45I	GTSAC	4 cut(s)	30, 36, 188, 2158
TspDTI	ATGAA	7 cut(s)	191, 273, 1489, 1508, 1713, 2042, 2163
TspGWI	ACGGA	1 cut(s)	1172
TspRI	CASTG	3 cut(s)	1169, 1482, 1513
Tth111I	GACNNNGTC	1 cut(s)	1706
VpaK11BI	GGWCC	3 cut(s)	880, 1179, 2149
XapI	RAATTY	4 cut(s)	843, 1334, 1541, 2000
XceI	RCATGY	2 cut(s)	1129, 1405
XhoI	CTCGAG	1 cut(s)	927
XmiI	GTMKAC	2 cut(s)	18, 1311
XmnI	GAANNNNTTC	2 cut(s)	1197, 1563
XspI	CTAG	2 cut(s)	744, 933

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.