Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000252

Physical Location & Seq

Genomic Coordinates Forward (+)

51967512 .. 51970106

Gene Structure 2595 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019430

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1455 bp

ATGCCAAAGCCGCAGGGACGGCAATGGTACGAGTGCATGACCATACGGAGCACAAAAACGGAAACCCCATTTACACTTGAGCTTTTGGTCAGACCAGCGCCCACTCTTCACTCTTGTTGCTCCCCCGAGATCTCTCATCAGATGGATGAAGTTTCTCTCAACACGGAGCCAGCGGGCGAGGATGATGCTGATGGGTATGAGATTGAAGGAGACTGTGCAATGACAGAGTTTGTAAGTCAAACTGGCATTATGCAAGGAGAGAACCCTCTCCCTCCTTCGGCTGGAATGGAGTTCGATTCTTATGAGGATGTATATTACTTCTACAATTGCTATGCTAAGCAACAGGGGTTCGGGGTTAGAGTGAGTAATACATGGTATAGAAAAAGCAAGGAAAGGTACAGAGGAAAGCTTAGCTGCAGTAGTGCAGGTTTCAAAAAGAAGAGTGAAGCTAATCGCCCAAGGCCAGAAACTAGAACCGGTTGTCCAGCAATGGTGAAGTTCAGGTTAATGGAGTCCAACAGGTGGAGAATTATTGAAGTTGAGCTCGAGCACAACCATTTGATCAGTCCAGCAAGTGGTAAATTTTATAAATCCCACAAGAGCATAGGTGGTGGAACCAAAAGATCATTGCAGTTGGATAGTGCTGAAGAAGTACAAAAGATAAGGCTATTCCGAACGGTGATTATTGATTCTGAGGGTAACAGAAGCATAGATGTTGACGAAGGAGAATCTGGAATGCTTCCTATGCAACCAAATGAGGTTGTCTCTTCATTTTCTGAAGAATTTCTGGTTAAAAGTACTCCTCTGAAGGAATTTCTAGATAAGTATGATCAAGCTCTGCAGACTCATCATCAGCTGGAAGCCTTGGCAGATTTGGATTCAAGAAACTCAAGTTATATGTTCAAATCGGGAAGTCATTTTGAGTTGCAACTCTCGGAACTGTACACTAATGACATCTTAAGGAAGTTTGGAAAGGAGGTAGAGGGGATGTACTCTTGTTTTAGCACAACACAAGTAAATGTCGATGGGCCAGTCATTACATATACAGTGAAGGAACAAACTGAAGTTGATGGAAATGGGAGAGAGATGAGAGATTATGAGGTTTTGCATAATCCATCTGAGATGGAGGTCCTTTGCGTCTGTGGTATGTTCAACTTGAAAGGATATTTATGCAGGCATGCGCTCTCCATCCTAAACCAAAATGGCATGCAGGAGATTCCAGCTCAATACATTCTTTCACGATGGAGAAAAGATGTTAAGCGCAGTTATGTTTATGATCACAGCTGCAGTGGCATTGATATTAATAACCCAGTTCACAGGTACGATCATCTGTATAAATGCATCGTGCAGGTTGTGCAGGAAGGGAGGAAATCACAAGACCGTTACAAGATTGCATTGCAGGAATTGGATGGGATATTGAACAAGCTTTGTATTACCGAAGATTGTGCCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

485

Amino Acids

55.37

Weight (kDa)

5.58

Isoelectric Point (pI)

50.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	107 - 188	6.7e-22	FAR1 DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80010
fragaria_vesca	FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica	MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica	Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis	pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis	RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata	RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora	Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii	Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa	Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha	Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana	Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	588
Acc36I	ACCTGC	2 cut(s)	416, 1339
AccB7I	CCANNNNNTGG	2 cut(s)	522, 575
AciI	CCGC	2 cut(s)	11, 173
AcsI	RAATTY	3 cut(s)	581, 782, 812
AcuI	CTGAAG	4 cut(s)	666, 798, 827, 1083
AfaI	GTAC	7 cut(s)	29, 398, 654, 799, 944, 992, 1322
AfiI	CCNNNNNNNGG	4 cut(s)	277, 281, 522, 575
AflII	CTTAAG	1 cut(s)	958
AgeI	ACCGGT	1 cut(s)	476
AgsI	TTSAA	8 cut(s)	206, 433, 536, 882, 904, 1153, 1159, 1420
AloI	GAACNNNNNNTCC	2 cut(s)	466, 498
Alw21I	GWGCWC	3 cut(s)	53, 546, 552
Alw26I	GTCTC	2 cut(s)	204, 769
Ama87I	CYCGRG	2 cut(s)	125, 545
AoxI	GGCC	2 cut(s)	461, 1028
ApeKI	GCWGC	2 cut(s)	414, 1284
ApoI	RAATTY	3 cut(s)	581, 782, 812
AseI	ATTAAT	1 cut(s)	1302
AsiGI	ACCGGT	1 cut(s)	476
Asp700I	GAANNNNTTC	1 cut(s)	783
AspLEI	GCGC	3 cut(s)	100, 1183, 1263
AspS9I	GGNCC	2 cut(s)	1028, 1129
AsuHPI	GGTGA	2 cut(s)	505, 691
AvaI	CYCGRG	2 cut(s)	125, 545
AvaII	GGWCC	1 cut(s)	1129
BanII	GRGCYC	1 cut(s)	546
Bbv12I	GWGCWC	3 cut(s)	53, 546, 552
BbvI	GCAGC	2 cut(s)	401, 1271
BccI	CCATC	9 cut(s)	136, 185, 1019, 1064, 1117, 1123, 1196, 1236, 1403
BceAI	ACGGC	1 cut(s)	35
BcgI	CGANNNNNNTGC	3 cut(s)	167, 201, 1427
BclI	TGATCA	3 cut(s)	561, 829, 1276
BcoDI	GTCTC	2 cut(s)	204, 769
BfaI	CTAG	2 cut(s)	471, 818
BfmI	CTRYAG	3 cut(s)	415, 839, 1285
BfoI	RGCGCY	1 cut(s)	101
BfrI	CTTAAG	1 cut(s)	958
BfuAI	ACCTGC	2 cut(s)	416, 1339
BglII	AGATCT	1 cut(s)	129
BisI	GCNGC	3 cut(s)	11, 415, 1285
BlpI	GCTNAGC	2 cut(s)	336, 410
BlsI	GCNGC	3 cut(s)	12, 416, 1286
BmcAI	AGTACT	1 cut(s)	799
Bme18I	GGWCC	1 cut(s)	1129
BmeT110I	CYCGRG	2 cut(s)	125, 545
BmgT120I	GGNCC	2 cut(s)	1028, 1129
BmiI	GGNNCC	2 cut(s)	168, 616
BmrI	ACTGGG	1 cut(s)	1304
BmsI	GCATC	2 cut(s)	175, 1350
BmuI	ACTGGG	1 cut(s)	1304
BplI	GAGNNNNNCTC	2 cut(s)	749, 781
Bpu1102I	GCTNAGC	2 cut(s)	336, 410
BpuEI	CTTGAG	2 cut(s)	98, 874
BsaJI	CCNNGG	2 cut(s)	458, 864
BsaWI	WCCGGW	1 cut(s)	476
Bsc4I	CCNNNNNNNGG	4 cut(s)	277, 281, 522, 575
Bse118I	RCCGGY	1 cut(s)	476
Bse1I	ACTGG	3 cut(s)	247, 1031, 1310
Bse3DI	GCAATG	5 cut(s)	29, 225, 495, 626, 1394
BseDI	CCNNGG	2 cut(s)	458, 864
BseGI	GGATG	6 cut(s)	151, 187, 313, 993, 1188, 1414
BseLI	CCNNNNNNNGG	4 cut(s)	277, 281, 522, 575
BseMI	GCAATG	5 cut(s)	29, 225, 495, 626, 1394
BseMII	CTCAG	2 cut(s)	684, 1110
BseNI	ACTGG	3 cut(s)	247, 1031, 1310
BseRI	GAGGAG	1 cut(s)	792
BseXI	GCAGC	2 cut(s)	401, 1271
BsgI	GTGCAG	3 cut(s)	444, 1367, 1376
BshFI	GGCC	2 cut(s)	463, 1030
BshTI	ACCGGT	1 cut(s)	476
BsiHKAI	GWGCWC	3 cut(s)	53, 546, 552
BsiHKCI	CYCGRG	2 cut(s)	125, 545
BsiSI	CCGG	1 cut(s)	477
BslFI	GGGAC	1 cut(s)	30
BslI	CCNNNNNNNGG	4 cut(s)	277, 281, 522, 575
BsmAI	GTCTC	2 cut(s)	204, 769
BsmFI	GGGAC	1 cut(s)	30
BsmI	GAATGC	1 cut(s)	741
BsnI	GGCC	2 cut(s)	463, 1030
BsoBI	CYCGRG	2 cut(s)	125, 545
Bsp1286I	GDGCHC	3 cut(s)	53, 546, 552
Bsp1407I	TGTACA	1 cut(s)	942
Bsp143I	GATC	6 cut(s)	129, 561, 623, 829, 1276, 1324
Bsp1720I	GCTNAGC	2 cut(s)	336, 410
BspACI	CCGC	2 cut(s)	11, 173
BspANI	GGCC	2 cut(s)	463, 1030
BspCNI	CTCAG	2 cut(s)	685, 1111
BspLI	GGNNCC	2 cut(s)	168, 616
BspMAI	CTGCAG	3 cut(s)	419, 843, 1289
BspMI	ACCTGC	2 cut(s)	416, 1339
BspTI	CTTAAG	1 cut(s)	958
BsrDI	GCAATG	5 cut(s)	29, 225, 495, 626, 1394
BsrFI	RCCGGY	1 cut(s)	476
BsrGI	TGTACA	1 cut(s)	942
BsrI	ACTGG	3 cut(s)	247, 1031, 1310
BssAI	RCCGGY	1 cut(s)	476
BssECI	CCNNGG	2 cut(s)	458, 864
BssMI	GATC	6 cut(s)	129, 561, 623, 829, 1276, 1324
BssT1I	CCWWGG	2 cut(s)	458, 864
Bst4CI	ACNGT	5 cut(s)	215, 679, 942, 1048, 1382
Bst6I	CTCTTC	3 cut(s)	111, 434, 772
BstAFI	CTTAAG	1 cut(s)	958
BstAPI	GCANNNNNTGC	1 cut(s)	1354
BstAUI	TGTACA	1 cut(s)	942
BstC8I	GCNNGC	5 cut(s)	171, 175, 1175, 1179, 1208
BstDEI	CTNAG	4 cut(s)	336, 410, 693, 1119
BstF5I	GGATG	6 cut(s)	151, 187, 313, 993, 1188, 1414
BstH2I	RGCGCY	1 cut(s)	101
BstHHI	GCGC	3 cut(s)	100, 1183, 1263
BstKTI	GATC	6 cut(s)	132, 564, 626, 832, 1279, 1327
BstMAI	GTCTC	2 cut(s)	204, 769
BstMBI	GATC	6 cut(s)	129, 561, 623, 829, 1276, 1324
BstMWI	GCNNNNNNNGC	5 cut(s)	10, 19, 745, 1290, 1354
BstNSI	RCATGY	2 cut(s)	1181, 1210
BstSFI	CTRYAG	3 cut(s)	415, 839, 1285
BstV1I	GCAGC	2 cut(s)	401, 1271
BstX2I	RGATCY	1 cut(s)	129
BstYI	RGATCY	1 cut(s)	129
BsuRI	GGCC	2 cut(s)	463, 1030
BtsCI	GGATG	6 cut(s)	151, 187, 313, 993, 1188, 1414
BtsI	GCAGTG	1 cut(s)	1294
BtsIMutI	CAGTG	2 cut(s)	1053, 1294
BveI	ACCTGC	2 cut(s)	416, 1339
Cac8I	GCNNGC	5 cut(s)	171, 175, 1175, 1179, 1208
CfoI	GCGC	3 cut(s)	100, 1183, 1263
Cfr10I	RCCGGY	1 cut(s)	476
Cfr13I	GGNCC	2 cut(s)	1028, 1129
CseI	GACGC	1 cut(s)	1126
Csp6I	GTAC	7 cut(s)	28, 397, 653, 798, 943, 991, 1321
CspAI	ACCGGT	1 cut(s)	476
CviAII	CATG	4 cut(s)	37, 372, 1178, 1207
CviQI	GTAC	7 cut(s)	28, 397, 653, 798, 943, 991, 1321
DdeI	CTNAG	4 cut(s)	336, 410, 693, 1119
DpnI	GATC	6 cut(s)	131, 563, 625, 831, 1278, 1326
DpnII	GATC	6 cut(s)	129, 561, 623, 829, 1276, 1324
Eam1104I	CTCTTC	3 cut(s)	111, 434, 772
EarI	CTCTTC	3 cut(s)	111, 434, 772
Ecl136II	GAGCTC	1 cut(s)	544
Eco130I	CCWWGG	2 cut(s)	458, 864
Eco24I	GRGCYC	1 cut(s)	546
Eco47I	GGWCC	1 cut(s)	1129
Eco53kI	GAGCTC	1 cut(s)	544
Eco57I	CTGAAG	4 cut(s)	666, 798, 827, 1083
Eco88I	CYCGRG	2 cut(s)	125, 545
EcoICRI	GAGCTC	1 cut(s)	544
EcoO109I	RGGNCCY	1 cut(s)	1129
EcoT14I	CCWWGG	2 cut(s)	458, 864
EcoT22I	ATGCAT	1 cut(s)	1343
EcoT38I	GRGCYC	1 cut(s)	546
ErhI	CCWWGG	2 cut(s)	458, 864
FaeI	CATG	4 cut(s)	40, 375, 1181, 1210
FaqI	GGGAC	1 cut(s)	30
FatI	CATG	4 cut(s)	36, 371, 1177, 1206
FauI	CCCGC	1 cut(s)	166
FbaI	TGATCA	3 cut(s)	561, 829, 1276
Fnu4HI	GCNGC	3 cut(s)	11, 415, 1285
FokI	GGATG	6 cut(s)	158, 194, 320, 1000, 1175, 1421
FriOI	GRGCYC	1 cut(s)	546
Fsp4HI	GCNGC	3 cut(s)	11, 415, 1285
FspBI	CTAG	2 cut(s)	471, 818
GlaI	GCGC	3 cut(s)	99, 1182, 1262
GluI	GCNGC	3 cut(s)	11, 415, 1285
HaeII	RGCGCY	1 cut(s)	101
HaeIII	GGCC	2 cut(s)	463, 1030
HapII	CCGG	1 cut(s)	477
HgaI	GACGC	1 cut(s)	1126
HhaI	GCGC	3 cut(s)	100, 1183, 1263
Hin1II	CATG	4 cut(s)	40, 375, 1181, 1210
Hin6I	GCGC	3 cut(s)	98, 1181, 1261
HinP1I	GCGC	3 cut(s)	98, 1181, 1261
HincII	GTYRAC	1 cut(s)	718
HindII	GTYRAC	1 cut(s)	718
HindIII	AAGCTT	2 cut(s)	407, 1424
HinfI	GANTC	7 cut(s)	296, 512, 689, 728, 844, 878, 1216
HpaII	CCGG	1 cut(s)	477
HphI	GGTGA	2 cut(s)	505, 691
Hpy166II	GTNNAC	3 cut(s)	718, 945, 1315
Hpy188I	TCNGA	8 cut(s)	92, 141, 674, 694, 778, 807, 937, 1120
Hpy188III	TCNNGA	5 cut(s)	732, 818, 882, 909, 1239
Hpy8I	GTNNAC	3 cut(s)	718, 945, 1315
HpyAV	CCTTC	6 cut(s)	200, 285, 716, 802, 1045, 1355
HpyCH4III	ACNGT	5 cut(s)	215, 679, 942, 1048, 1382
HpyF10VI	GCNNNNNNNGC	5 cut(s)	10, 19, 745, 1290, 1354
HpyF3I	CTNAG	4 cut(s)	336, 410, 693, 1119
Hsp92II	CATG	4 cut(s)	40, 375, 1181, 1210
HspAI	GCGC	3 cut(s)	98, 1181, 1261
Ksp22I	TGATCA	3 cut(s)	561, 829, 1276
Kzo9I	GATC	6 cut(s)	129, 561, 623, 829, 1276, 1324
LmnI	GCTCC	3 cut(s)	48, 125, 166
Lsp1109I	GCAGC	2 cut(s)	401, 1271
LweI	GCATC	2 cut(s)	175, 1350
MaeI	CTAG	2 cut(s)	471, 818
MaeIII	GTNAC	2 cut(s)	698, 1382
MalI	GATC	6 cut(s)	131, 563, 625, 831, 1278, 1326
MboI	GATC	6 cut(s)	129, 561, 623, 829, 1276, 1324
MboII	GAAGA	6 cut(s)	98, 451, 659, 759, 791, 1451
MfeI	CAATTG	1 cut(s)	325
MflI	RGATCY	1 cut(s)	129
MhlI	GDGCHC	3 cut(s)	53, 546, 552
MluCI	AATT	6 cut(s)	325, 528, 581, 782, 812, 1403
MlyI	GAGTC	2 cut(s)	521, 838
MmeI	TCCRAC	2 cut(s)	540, 615
Mph1103I	ATGCAT	1 cut(s)	1343
MroXI	GAANNNNTTC	1 cut(s)	783
MseI	TTAA	5 cut(s)	506, 792, 959, 1257, 1302
MspA1I	CMGCKG	3 cut(s)	173, 856, 1284
MspCI	CTTAAG	1 cut(s)	958
MspI	CCGG	1 cut(s)	477
MunI	CAATTG	1 cut(s)	325
Mva1269I	GAATGC	1 cut(s)	741
MwoI	GCNNNNNNNGC	5 cut(s)	10, 19, 745, 1290, 1354
NdeII	GATC	6 cut(s)	129, 561, 623, 829, 1276, 1324
NlaIII	CATG	4 cut(s)	40, 375, 1181, 1210
NlaIV	GGNNCC	2 cut(s)	168, 616
NsiI	ATGCAT	1 cut(s)	1343
NspI	RCATGY	2 cut(s)	1181, 1210
PaeI	GCATGC	2 cut(s)	1181, 1210
PaeR7I	CTCGAG	1 cut(s)	545
PctI	GAATGC	1 cut(s)	741
PdmI	GAANNNNTTC	1 cut(s)	783
PfeI	GAWTC	5 cut(s)	296, 689, 728, 878, 1216
PflMI	CCANNNNNTGG	2 cut(s)	522, 575
PinAI	ACCGGT	1 cut(s)	476
PkrI	GCNGC	3 cut(s)	12, 416, 1286
PleI	GAGTC	2 cut(s)	520, 838
PpsI	GAGTC	2 cut(s)	520, 838
PpuMI	RGGWCCY	1 cut(s)	1129
PshBI	ATTAAT	1 cut(s)	1302
PsiI	TTATAA	1 cut(s)	588
Psp124BI	GAGCTC	1 cut(s)	546
Psp5II	RGGWCCY	1 cut(s)	1129
PspN4I	GGNNCC	2 cut(s)	168, 616
PspPI	GGNCC	2 cut(s)	1028, 1129
PspPPI	RGGWCCY	1 cut(s)	1129
PspXI	VCTCGAGB	1 cut(s)	545
PstI	CTGCAG	3 cut(s)	419, 843, 1289
PsuI	RGATCY	1 cut(s)	129
PvuII	CAGCTG	2 cut(s)	856, 1284
RsaI	GTAC	7 cut(s)	29, 398, 654, 799, 944, 992, 1322
RsaNI	GTAC	7 cut(s)	28, 397, 653, 798, 943, 991, 1321
SacI	GAGCTC	1 cut(s)	546
SaqAI	TTAA	5 cut(s)	506, 792, 959, 1257, 1302
SatI	GCNGC	3 cut(s)	11, 415, 1285
Sau3AI	GATC	6 cut(s)	129, 561, 623, 829, 1276, 1324
Sau96I	GGNCC	2 cut(s)	1028, 1129
ScaI	AGTACT	1 cut(s)	799
SchI	GAGTC	2 cut(s)	521, 838
SduI	GDGCHC	3 cut(s)	53, 546, 552
SfaNI	GCATC	2 cut(s)	175, 1350
SfcI	CTRYAG	3 cut(s)	415, 839, 1285
Sfr274I	CTCGAG	1 cut(s)	545
SinI	GGWCC	1 cut(s)	1129
SlaI	CTCGAG	1 cut(s)	545
SmlI	CTYRAG	4 cut(s)	77, 545, 889, 958
SmoI	CTYRAG	4 cut(s)	77, 545, 889, 958
SphI	GCATGC	2 cut(s)	1181, 1210
Sse9I	AATT	6 cut(s)	325, 528, 581, 782, 812, 1403
SsiI	CCGC	2 cut(s)	11, 173
SspMI	CTAG	2 cut(s)	471, 818
SstI	GAGCTC	1 cut(s)	546
StyI	CCWWGG	2 cut(s)	458, 864
TaaI	ACNGT	5 cut(s)	215, 679, 942, 1048, 1382
TaqI	TCGA	3 cut(s)	294, 546, 1023
TasI	AATT	6 cut(s)	325, 528, 581, 782, 812, 1403
TatI	WGTACW	4 cut(s)	652, 797, 942, 990
TauI	GCSGC	1 cut(s)	13
TfiI	GAWTC	5 cut(s)	296, 689, 728, 878, 1216
Tru1I	TTAA	5 cut(s)	506, 792, 959, 1257, 1302
Tru9I	TTAA	5 cut(s)	506, 792, 959, 1257, 1302
TscAI	CASTG	2 cut(s)	1053, 1294
TseI	GCWGC	2 cut(s)	414, 1284
TspDTI	ATGAA	2 cut(s)	162, 759
TspGWI	ACGGA	3 cut(s)	61, 74, 179
TspRI	CASTG	2 cut(s)	1053, 1294
Van91I	CCANNNNNTGG	2 cut(s)	522, 575
Vha464I	CTTAAG	1 cut(s)	958
VpaK11BI	GGWCC	1 cut(s)	1129
VspI	ATTAAT	1 cut(s)	1302
XapI	RAATTY	3 cut(s)	581, 782, 812
XbaI	TCTAGA	1 cut(s)	817
XceI	RCATGY	2 cut(s)	1181, 1210
XhoI	CTCGAG	1 cut(s)	545
XmnI	GAANNNNTTC	1 cut(s)	783
XspI	CTAG	2 cut(s)	471, 818
ZrmI	AGTACT	1 cut(s)	799
Zsp2I	ATGCAT	1 cut(s)	1343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.