Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000252

Physical Location & Seq

Genomic Coordinates Forward (+)

22735828 .. 22738690

Gene Structure 2863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g29432.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGATGAAGTTTCTCTCAACACGGAGCCAGCAGGCGATGATGATGCTGATGGTTATGAGATTGAAGGAGACTGTGCAATGACAGAGTTTGTAAGTCAAACTGGCATTATGCAAGGGGAAAATCCTCTTCCACCTGCGGCTGGAATGGAGTTCGATACTTATGAGGATGTGTATTACTTCTACAATTGCTATGCTAAGCAACATGGGTTCGGGGTTAGAGTAAGCAATACATGGTATAGAAAGAGCAAGGAAAGGTACAGAGGAAAGCTTAGCTGCAGTAGTGCAGGTTTCAAAAAGAAGAGTGATGCTAACCGCCCAAGACCGGAGACTAGAACAGGTTGTCCAGCAATGGTCAAGTTCAGATTAATGGAATCCAACAGGTGGAGAATTATTGAAGTTGAGCTTGAGCACAACCATTTGATCAGCCCAGCAAGTGGTAAATTTTATAAATCCCACAAGAGCATAGGTGGCGGAACCAAAAGATCATTGCAGTTGGATAGTGCTGAAGAAGTACAAAAGATAAGGCTGTTCCGAACGGTGATTGTTGATTCTGAGGGTCACAGAAGCATAGATGTTGACGAAGGAGAATCTGGTAGTAAAGTTGACTACTCCAATCAACTGAGGCTTAAAGAAGGAGATGCCCAAGCTGTTCAGAATTTCTTTTCACGCTTGCAGTTGATGGATCCAGACTTCTTTTATGTAGTGGATCTAAATGAGAAAGGATGCTTGAGAAATTTGTTTTGGGCTGATGCAAGGAGTAGAGTTGCTTACACCTATTTCAGTGATGTAGTTGCCATTGACACTACATGCTTGGAGAACAAATTTGAGGTCCCATTGGTTTCATTCTGTGGAGTCAATCACCATGGACAATCTGTGCTGCTGGGTTGTGGTTTACTTCCAAGTGGGACTATTGAATCCTATACATGGTTGTTTAGAGCTTGGCTTACATGCATATTGGGACGTCCTCCACAAGCCATCATAACTGACCAATGCAGAACATTACAAACTGCTATTGCTGATGTTTTCCCTCGAGCTTCTCACTGTCTTTGCTTGTCCCAAATAATGCACAAAATTCCAGAAAATTTGGGAGGATTATTTGAATATGAAGCAATTAAAGCAGCTTTTATTAGAGCAGTTCACTATTCTTTCAGGGTGGAGGAATTTGAAGCAGCCTGGGAAGATATGGTCCAGCGTCATGGAATTAGGGATCATAATTGGCTTCAAGCATTATACGAGGATCGAAAGCAGTGGGTACCAGTATATTTGAGGGATATATTTTTGGCAGGGATGTCTCCTATGCAACCAAGTGAGGTTGTCTCTTCATTTTTTGAAGAATTTCTGGTTAAAAGTACTCCTCTAAAAGACTTTTTAGACAAATATGATCAAGCTCTGCAGACTCATCATCAGCTGGAAGTCTTGGCAGATTTGGATTCAAGAAACTCAAGTTATATGTTCAAATCGGGAAGTCATTTTGAGTTGCAACTCTCGGAACTGTACACTAATGACATTTTAAGGAAGTTTGGAAAGGAGGTAGAGGGGATGTACTCTTGTTTCAGCACAAGACAATTAAATGTTGATGGGCCACTGATCAAATATACAGTGAAGGAACAAACTGAAGTTGATGGAAACAGGAGGGAGATGAGAGATTATGAGGTTTTGTACAATCCATCTGAGATGGAGGTCCTTTGCATCTGTGGTATGTTCAACTTGAAAGGATATTTATGCAGGCATGCGCTCTCCATCCTAAACCAGAATGGCGTGCAGGAGATTCCAGCTCTATACATTCTTTCACGATGGAGAAAAGATATTAAGCGCAGTTATGTCTATGATCACAGCTGCAGTGGCATTGATATTAATAACCCAGTCCACAGGTACGATCACCTGTATAAATGCATCGTGCAGGTTGTGGAGGAAGGGAGGAAATCACAAGACCGTTACAAGGTTGCATTGCAGGAATTGAATGGGATATTGAACAAGCTTTGTATTACTGAAGATTGTGCCTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

669

Amino Acids

76.76

Weight (kDa)

5.7

Isoelectric Point (pI)

45.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	60 - 141	1.2e-21	FAR1 DNA-binding domain
MULE	PF10551	263 - 357	2.1e-27	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80010
fragaria_vesca	FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica	MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica	Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis	pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis	RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata	RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora	Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii	Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa	Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha	Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana	Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	447
AarI	CACCTGC	1 cut(s)	142
AatII	GACGTC	1 cut(s)	964
Acc36I	ACCTGC	3 cut(s)	142, 275, 1891
Acc65I	GGTACC	1 cut(s)	1252
AccB1I	GGYRCC	1 cut(s)	1252
AccB7I	CCANNNNNTGG	2 cut(s)	381, 434
AciI	CCGC	3 cut(s)	137, 313, 471
AclWI	GGATC	5 cut(s)	677, 690, 714, 1215, 1245
AcsI	RAATTY	8 cut(s)	440, 655, 733, 821, 1071, 1081, 1160, 1334
AcuI	CTGAAG	2 cut(s)	525, 1635
AcyI	GRCGYC	1 cut(s)	961
AfaI	GTAC	8 cut(s)	257, 513, 1254, 1351, 1496, 1544, 1661, 1874
AfiI	CCNNNNNNNGG	6 cut(s)	140, 322, 381, 434, 924, 1939
AjnI	CCWGG	1 cut(s)	1172
AjuI	GAANNNNNNNTTGG	2 cut(s)	724, 756
AloI	GAACNNNNNNTCC	2 cut(s)	325, 357
Alw21I	GWGCWC	1 cut(s)	411
Alw26I	GTCTC	4 cut(s)	63, 320, 1296, 1321
AlwI	GGATC	5 cut(s)	677, 690, 714, 1215, 1245
Ama87I	CYCGRG	1 cut(s)	1029
AoxI	GGCC	1 cut(s)	1580
ApeKI	GCWGC	5 cut(s)	273, 877, 1118, 1169, 1836
ApoI	RAATTY	8 cut(s)	440, 655, 733, 821, 1071, 1081, 1160, 1334
ArsI	GACNNNNNNTTYG	2 cut(s)	813, 845
AseI	ATTAAT	2 cut(s)	365, 1854
Asp700I	GAANNNNTTC	1 cut(s)	1335
Asp718I	GGTACC	1 cut(s)	1252
AspLEI	GCGC	2 cut(s)	1735, 1815
AspS9I	GGNCC	4 cut(s)	829, 1186, 1580, 1681
AsuHPI	GGTGA	3 cut(s)	550, 851, 1871
AvaI	CYCGRG	1 cut(s)	1029
AvaII	GGWCC	3 cut(s)	829, 1186, 1681
BamHI	GGATCC	1 cut(s)	682
BanI	GGYRCC	1 cut(s)	1252
Bbv12I	GWGCWC	1 cut(s)	411
BbvI	GCAGC	5 cut(s)	260, 864, 1130, 1181, 1823
BccI	CCATC	9 cut(s)	44, 673, 983, 1571, 1616, 1669, 1675, 1748, 1788
BcgI	CGANNNNNNTGC	2 cut(s)	26, 60
BciT130I	CCWGG	1 cut(s)	1174
BclI	TGATCA	4 cut(s)	420, 1381, 1587, 1828
BcoDI	GTCTC	4 cut(s)	63, 320, 1296, 1321
BfaI	CTAG	1 cut(s)	330
BfmI	CTRYAG	3 cut(s)	274, 1391, 1837
BfuAI	ACCTGC	3 cut(s)	142, 275, 1891
BisI	GCNGC	6 cut(s)	138, 274, 878, 1119, 1170, 1837
BlpI	GCTNAGC	2 cut(s)	195, 269
BlsI	GCNGC	6 cut(s)	139, 275, 879, 1120, 1171, 1838
BmcAI	AGTACT	1 cut(s)	1351
Bme1390I	CCNGG	1 cut(s)	1174
Bme18I	GGWCC	3 cut(s)	829, 1186, 1681
BmeT110I	CYCGRG	1 cut(s)	1029
BmgT120I	GGNCC	4 cut(s)	829, 1186, 1580, 1681
BmiI	GGNNCC	5 cut(s)	27, 475, 684, 831, 1254
BmrFI	CCNGG	1 cut(s)	1174
BmrI	ACTGGG	1 cut(s)	1856
BmsI	GCATC	7 cut(s)	34, 295, 628, 713, 739, 1698, 1902
BmuI	ACTGGG	1 cut(s)	1856
BplI	GAGNNNNNCTC	2 cut(s)	1301, 1333
Bpu1102I	GCTNAGC	2 cut(s)	195, 269
BpuEI	CTTGAG	3 cut(s)	425, 748, 1426
BsaHI	GRCGYC	1 cut(s)	961
BsaJI	CCNNGG	2 cut(s)	862, 1173
BsaWI	WCCGGW	1 cut(s)	322
Bsc4I	CCNNNNNNNGG	6 cut(s)	140, 322, 381, 434, 924, 1939
Bse1I	ACTGG	3 cut(s)	106, 1256, 1862
Bse3DI	GCAATG	4 cut(s)	84, 354, 485, 1946
BseBI	CCWGG	1 cut(s)	1174
BseDI	CCNNGG	2 cut(s)	862, 1173
BseGI	GGATG	6 cut(s)	10, 172, 728, 1293, 1545, 1740
BseLI	CCNNNNNNNGG	6 cut(s)	140, 322, 381, 434, 924, 1939
BseMI	GCAATG	4 cut(s)	84, 354, 485, 1946
BseMII	CTCAG	3 cut(s)	543, 611, 1662
BseNI	ACTGG	3 cut(s)	106, 1256, 1862
BseRI	GAGGAG	1 cut(s)	1344
BseXI	GCAGC	5 cut(s)	260, 864, 1130, 1181, 1823
BseYI	CCCAGC	2 cut(s)	427, 880
BsgI	GTGCAG	3 cut(s)	303, 1781, 1919
BshFI	GGCC	1 cut(s)	1582
BshNI	GGYRCC	1 cut(s)	1252
BsiHKAI	GWGCWC	1 cut(s)	411
BsiHKCI	CYCGRG	1 cut(s)	1029
BsiSI	CCGG	1 cut(s)	323
BslFI	GGGAC	4 cut(s)	815, 919, 972, 1039
BslI	CCNNNNNNNGG	6 cut(s)	140, 322, 381, 434, 924, 1939
BsmAI	GTCTC	4 cut(s)	63, 320, 1296, 1321
BsmFI	GGGAC	4 cut(s)	815, 919, 972, 1039
BsnI	GGCC	1 cut(s)	1582
BsoBI	CYCGRG	1 cut(s)	1029
Bsp1286I	GDGCHC	1 cut(s)	411
Bsp1407I	TGTACA	2 cut(s)	1494, 1659
Bsp1720I	GCTNAGC	2 cut(s)	195, 269
Bsp19I	CCATGG	1 cut(s)	862
BspACI	CCGC	3 cut(s)	137, 313, 471
BspANI	GGCC	1 cut(s)	1582
BspCNI	CTCAG	3 cut(s)	544, 612, 1663
BspLI	GGNNCC	5 cut(s)	27, 475, 684, 831, 1254
BspMAI	CTGCAG	3 cut(s)	278, 1395, 1841
BspMI	ACCTGC	3 cut(s)	142, 275, 1891
BspPI	GGATC	5 cut(s)	677, 690, 714, 1215, 1245
BspT107I	GGYRCC	1 cut(s)	1252
BsrDI	GCAATG	4 cut(s)	84, 354, 485, 1946
BsrGI	TGTACA	2 cut(s)	1494, 1659
BsrI	ACTGG	3 cut(s)	106, 1256, 1862
BssECI	CCNNGG	2 cut(s)	862, 1173
BssNI	GRCGYC	1 cut(s)	961
BssT1I	CCWWGG	1 cut(s)	862
Bst2UI	CCWGG	1 cut(s)	1174
Bst4CI	ACNGT	6 cut(s)	74, 538, 1043, 1494, 1600, 1934
Bst6I	CTCTTC	3 cut(s)	132, 293, 1324
BstACI	GRCGYC	1 cut(s)	961
BstAUI	TGTACA	2 cut(s)	1494, 1659
BstC8I	GCNNGC	6 cut(s)	30, 34, 671, 1727, 1731, 1760
BstDEI	CTNAG	5 cut(s)	195, 269, 552, 620, 1671
BstDSI	CCRYGG	1 cut(s)	862
BstF5I	GGATG	6 cut(s)	10, 172, 728, 1293, 1545, 1740
BstHHI	GCGC	2 cut(s)	1735, 1815
BstMAI	GTCTC	4 cut(s)	63, 320, 1296, 1321
BstMWI	GCNNNNNNNGC	3 cut(s)	468, 1115, 1842
BstNI	CCWGG	1 cut(s)	1174
BstNSI	RCATGY	3 cut(s)	810, 951, 1733
BstSCI	CCNGG	1 cut(s)	1172
BstSFI	CTRYAG	3 cut(s)	274, 1391, 1837
BstV1I	GCAGC	5 cut(s)	260, 864, 1130, 1181, 1823
BstX2I	RGATCY	2 cut(s)	682, 706
BstXI	CCANNNNNNTGG	1 cut(s)	1196
BstYI	RGATCY	2 cut(s)	682, 706
BsuRI	GGCC	1 cut(s)	1582
BtgI	CCRYGG	1 cut(s)	862
BtgZI	GCGATG	1 cut(s)	51
BtsCI	GGATG	6 cut(s)	10, 172, 728, 1293, 1545, 1740
BtsI	GCAGTG	2 cut(s)	1253, 1846
BtsIMutI	CAGTG	6 cut(s)	787, 1039, 1253, 1583, 1605, 1846
BveI	ACCTGC	3 cut(s)	142, 275, 1891
Cac8I	GCNNGC	6 cut(s)	30, 34, 671, 1727, 1731, 1760
CfoI	GCGC	2 cut(s)	1735, 1815
Cfr13I	GGNCC	4 cut(s)	829, 1186, 1580, 1681
CseI	GACGC	1 cut(s)	1181
Csp6I	GTAC	8 cut(s)	256, 512, 1253, 1350, 1495, 1543, 1660, 1873
CviAII	CATG	8 cut(s)	203, 231, 807, 863, 924, 948, 1196, 1730
CviQI	GTAC	8 cut(s)	256, 512, 1253, 1350, 1495, 1543, 1660, 1873
DdeI	CTNAG	5 cut(s)	195, 269, 552, 620, 1671
Eam1104I	CTCTTC	3 cut(s)	132, 293, 1324
EarI	CTCTTC	3 cut(s)	132, 293, 1324
EciI	GGCGGA	1 cut(s)	486
Eco130I	CCWWGG	1 cut(s)	862
Eco47I	GGWCC	3 cut(s)	829, 1186, 1681
Eco57I	CTGAAG	2 cut(s)	525, 1635
Eco88I	CYCGRG	1 cut(s)	1029
EcoO109I	RGGNCCY	2 cut(s)	829, 1681
EcoRII	CCWGG	1 cut(s)	1172
EcoT14I	CCWWGG	1 cut(s)	862
EcoT22I	ATGCAT	2 cut(s)	953, 1895
ErhI	CCWWGG	1 cut(s)	862
FaeI	CATG	8 cut(s)	206, 234, 810, 866, 927, 951, 1199, 1733
FalI	AAGNNNNNCTT	2 cut(s)	387, 419
FaqI	GGGAC	4 cut(s)	815, 919, 972, 1039
FatI	CATG	8 cut(s)	202, 230, 806, 862, 923, 947, 1195, 1729
FbaI	TGATCA	4 cut(s)	420, 1381, 1587, 1828
Fnu4HI	GCNGC	6 cut(s)	138, 274, 878, 1119, 1170, 1837
FokI	GGATG	6 cut(s)	17, 179, 735, 1300, 1552, 1727
Fsp4HI	GCNGC	6 cut(s)	138, 274, 878, 1119, 1170, 1837
FspBI	CTAG	1 cut(s)	330
GlaI	GCGC	2 cut(s)	1734, 1814
GluI	GCNGC	6 cut(s)	138, 274, 878, 1119, 1170, 1837
GsaI	CCCAGC	2 cut(s)	431, 884
HaeIII	GGCC	1 cut(s)	1582
HapII	CCGG	1 cut(s)	323
HgaI	GACGC	1 cut(s)	1181
HhaI	GCGC	2 cut(s)	1735, 1815
Hin1I	GRCGYC	1 cut(s)	961
Hin1II	CATG	8 cut(s)	206, 234, 810, 866, 927, 951, 1199, 1733
Hin6I	GCGC	2 cut(s)	1733, 1813
HinP1I	GCGC	2 cut(s)	1733, 1813
HincII	GTYRAC	2 cut(s)	577, 604
HindII	GTYRAC	2 cut(s)	577, 604
HindIII	AAGCTT	2 cut(s)	266, 1976
HinfI	GANTC	8 cut(s)	371, 548, 587, 852, 914, 1396, 1430, 1768
HpaII	CCGG	1 cut(s)	323
HphI	GGTGA	3 cut(s)	550, 851, 1871
Hpy166II	GTNNAC	6 cut(s)	577, 604, 893, 1138, 1497, 1867
Hpy188I	TCNGA	6 cut(s)	362, 533, 553, 654, 1489, 1672
Hpy188III	TCNNGA	5 cut(s)	686, 1076, 1434, 1461, 1791
Hpy8I	GTNNAC	6 cut(s)	577, 604, 893, 1138, 1497, 1867
HpyAV	CCTTC	5 cut(s)	59, 575, 626, 1597, 1907
HpyCH4III	ACNGT	6 cut(s)	74, 538, 1043, 1494, 1600, 1934
HpyCH4IV	ACGT	1 cut(s)	961
HpyF10VI	GCNNNNNNNGC	3 cut(s)	468, 1115, 1842
HpyF3I	CTNAG	5 cut(s)	195, 269, 552, 620, 1671
HpySE526I	ACGT	1 cut(s)	961
Hsp92I	GRCGYC	1 cut(s)	961
Hsp92II	CATG	8 cut(s)	206, 234, 810, 866, 927, 951, 1199, 1733
HspAI	GCGC	2 cut(s)	1733, 1813
KpnI	GGTACC	1 cut(s)	1256
Ksp22I	TGATCA	4 cut(s)	420, 1381, 1587, 1828
LmnI	GCTCC	1 cut(s)	25
Lsp1109I	GCAGC	5 cut(s)	260, 864, 1130, 1181, 1823
LweI	GCATC	7 cut(s)	34, 295, 628, 713, 739, 1698, 1902
MaeI	CTAG	1 cut(s)	330
MaeII	ACGT	1 cut(s)	961
MaeIII	GTNAC	2 cut(s)	557, 1934
MboII	GAAGA	7 cut(s)	119, 310, 518, 1190, 1311, 1343, 2003
MfeI	CAATTG	1 cut(s)	184
MflI	RGATCY	2 cut(s)	682, 706
MhlI	GDGCHC	1 cut(s)	411
MlyI	GAGTC	2 cut(s)	861, 1390
MmeI	TCCRAC	2 cut(s)	399, 474
Mph1103I	ATGCAT	2 cut(s)	953, 1895
MroXI	GAANNNNTTC	1 cut(s)	1335
MseI	TTAA	8 cut(s)	365, 627, 1113, 1344, 1511, 1568, 1809, 1854
MspA1I	CMGCKG	2 cut(s)	1408, 1836
MspI	CCGG	1 cut(s)	323
MspR9I	CCNGG	1 cut(s)	1174
MunI	CAATTG	1 cut(s)	184
MvaI	CCWGG	1 cut(s)	1174
MwoI	GCNNNNNNNGC	3 cut(s)	468, 1115, 1842
NcoI	CCATGG	1 cut(s)	862
NlaIII	CATG	8 cut(s)	206, 234, 810, 866, 927, 951, 1199, 1733
NlaIV	GGNNCC	5 cut(s)	27, 475, 684, 831, 1254
NmuCI	GTSAC	1 cut(s)	557
NsiI	ATGCAT	2 cut(s)	953, 1895
NspI	RCATGY	3 cut(s)	810, 951, 1733
PaeI	GCATGC	1 cut(s)	1733
PaeR7I	CTCGAG	1 cut(s)	1029
PaqCI	CACCTGC	1 cut(s)	142
PdmI	GAANNNNTTC	1 cut(s)	1335
PfeI	GAWTC	6 cut(s)	371, 548, 587, 914, 1430, 1768
PflMI	CCANNNNNTGG	2 cut(s)	381, 434
PkrI	GCNGC	6 cut(s)	139, 275, 879, 1120, 1171, 1838
PleI	GAGTC	2 cut(s)	860, 1390
PpsI	GAGTC	2 cut(s)	860, 1390
PpuMI	RGGWCCY	2 cut(s)	829, 1681
PshBI	ATTAAT	2 cut(s)	365, 1854
PsiI	TTATAA	1 cut(s)	447
Psp5II	RGGWCCY	2 cut(s)	829, 1681
Psp6I	CCWGG	1 cut(s)	1172
PspFI	CCCAGC	2 cut(s)	427, 880
PspGI	CCWGG	1 cut(s)	1172
PspN4I	GGNNCC	5 cut(s)	27, 475, 684, 831, 1254
PspPI	GGNCC	4 cut(s)	829, 1186, 1580, 1681
PspPPI	RGGWCCY	2 cut(s)	829, 1681
PspXI	VCTCGAGB	1 cut(s)	1029
PstI	CTGCAG	3 cut(s)	278, 1395, 1841
PsuI	RGATCY	2 cut(s)	682, 706
PvuII	CAGCTG	2 cut(s)	1408, 1836
RsaI	GTAC	8 cut(s)	257, 513, 1254, 1351, 1496, 1544, 1661, 1874
RsaNI	GTAC	8 cut(s)	256, 512, 1253, 1350, 1495, 1543, 1660, 1873
SaqAI	TTAA	8 cut(s)	365, 627, 1113, 1344, 1511, 1568, 1809, 1854
SatI	GCNGC	6 cut(s)	138, 274, 878, 1119, 1170, 1837
Sau96I	GGNCC	4 cut(s)	829, 1186, 1580, 1681
ScaI	AGTACT	1 cut(s)	1351
SchI	GAGTC	2 cut(s)	861, 1390
ScrFI	CCNGG	1 cut(s)	1174
SduI	GDGCHC	1 cut(s)	411
SfaNI	GCATC	7 cut(s)	34, 295, 628, 713, 739, 1698, 1902
SfcI	CTRYAG	3 cut(s)	274, 1391, 1837
Sfr274I	CTCGAG	1 cut(s)	1029
SinI	GGWCC	3 cut(s)	829, 1186, 1681
SlaI	CTCGAG	1 cut(s)	1029
SmlI	CTYRAG	4 cut(s)	404, 727, 1029, 1441
SmoI	CTYRAG	4 cut(s)	404, 727, 1029, 1441
SphI	GCATGC	1 cut(s)	1733
SsiI	CCGC	3 cut(s)	137, 313, 471
SspMI	CTAG	1 cut(s)	330
StyD4I	CCNGG	1 cut(s)	1172
StyI	CCWWGG	1 cut(s)	862
TaaI	ACNGT	6 cut(s)	74, 538, 1043, 1494, 1600, 1934
TaiI	ACGT	1 cut(s)	964
TaqI	TCGA	3 cut(s)	153, 1030, 1240
TatI	WGTACW	5 cut(s)	511, 1349, 1494, 1542, 1659
TauI	GCSGC	1 cut(s)	140
TfiI	GAWTC	6 cut(s)	371, 548, 587, 914, 1430, 1768
Tru1I	TTAA	8 cut(s)	365, 627, 1113, 1344, 1511, 1568, 1809, 1854
Tru9I	TTAA	8 cut(s)	365, 627, 1113, 1344, 1511, 1568, 1809, 1854
TscAI	CASTG	6 cut(s)	787, 1046, 1253, 1590, 1605, 1846
TseFI	GTSAC	1 cut(s)	557
TseI	GCWGC	5 cut(s)	273, 877, 1118, 1169, 1836
Tsp45I	GTSAC	1 cut(s)	557
TspDTI	ATGAA	4 cut(s)	21, 831, 1119, 1311
TspGWI	ACGGA	1 cut(s)	38
TspRI	CASTG	6 cut(s)	787, 1046, 1253, 1590, 1605, 1846
Van91I	CCANNNNNTGG	2 cut(s)	381, 434
VpaK11BI	GGWCC	3 cut(s)	829, 1186, 1681
VspI	ATTAAT	2 cut(s)	365, 1854
XapI	RAATTY	8 cut(s)	440, 655, 733, 821, 1071, 1081, 1160, 1334
XceI	RCATGY	3 cut(s)	810, 951, 1733
XhoI	CTCGAG	1 cut(s)	1029
XmnI	GAANNNNTTC	1 cut(s)	1335
XspI	CTAG	1 cut(s)	330
ZraI	GACGTC	1 cut(s)	962
ZrmI	AGTACT	1 cut(s)	1351
Zsp2I	ATGCAT	2 cut(s)	953, 1895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.