Prupe.4G256500_v2.0.a1

Protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
18059379 .. 18061586
2208 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G256500.1

Sequence Viewer

Length: 2148 bp
ATGGAAAAGAATGATGGTGAAGCAGTAAGTGAGGAGCCTGAATTGGAGAATAGAGAGAATGTGGAAGAGCCTCGAGTTGGGATGACTTTTAACAACATTGATGATATAGTTGTCTATTATAGAGAATATGGGAAGCAATTAGGGTTTCCCGTGAGGAAGAGAACATCACAAAAGGGAGATGAAGGAGAATTGAAATATGTGACTATTTCATGTGGTCGAGAAGGCAAATATAAGAGTAAATCAAGTAATGTCCTAAAGCCACATCCAAGTATAAAAATTGGTTGCAAAGCTAGAGTAAGAGCAGGTATAATCTTAGATGGAAGGTGGCAGATCAACTCTATCAACCTTGATCATAACCATGATATGAGTCCAACCAAGGCTCGTTATTTTCGATGTCATCGGACAATAAGTTCATATATGAAAAGGAGGATTGAGTTAAATGATAGAGCTGGAATAAGGTTAAACAAGAGCTATAATTCATTAGTGGTTGAAGCTGGGGGCCATGAGAATATCTCCTTTTTGGAAAAGGATTGTAGAAATTATATTGAAAATGTGAGACGATTACGGCTTGGGGAAGGCGATGCTACTGCAATCCAAACTTATTTTCTGAATATGCAAGCTCAAAATTCAAATTTCTTCTATGCAATTGATTTAGATCAAGATGGTCGGTTAAGAAATGTATTTTGGGCAGATGCAAGAAGTAGGGCGGCATATAAGGAATTTGGAGATGTTGTTACATTTGATACAACCTACTTGACGAATAAGTATGACATGCCATTTGCTCCATTTGTGGGGGTAAATCATCATGGGCAATCAATTTTACTTGGATGTGGGCTGATTTCAAGTGAAGATACTGATGCTTTTATTTGGTTGTTTAAGTCTTGGCTCACATGTATGCATGAGCACGCTCCTAGGGGAATAATTACTGATCAAGATAAAGCCATGAAAAATGCCATTGAGATTATTTTTCCTAATACTAGACATCGTTGGTGCTTGTGGCACATAATGAACAAGTTTCCTAGTAAGTTGAACCGTTACAAGCAATATGAAGCTATCATGTATGCCTTGCAAAGTATTGTGTATGGCTCATTGGAGAAGGTTGAGTTTGAAGAAGGTTGGGATGAAATAATTGAGAAATATGAGTTACAAGACAATGAATGGTTGGCTGGACTATATAATGAGAGACAACGTTGGGTACCATATTTTGTGAAAGATAGTTTTTGGGCAGGAATGTCTACCACACAACGAAGTGAAAGTATGAATGCATTTTTTGATGACCATGTAAATTCTAAGACTACTTTAAAACAGTTTGTGGAGCAATATGAAAATGCATTGAAAGTTAAGGTGGAAAAGGAGAAGCAAGAAGATTTTAAGTCTTCATCCATTGGTTTTGATTGTGGAACTCATTATAACATGGAGAAACAGGCTCAAGAGGTTTACACTATTTCCAAATATAAAGAATTTCATGAAGAATTAATAGGCAAAATGTATTGCGACTATGTTTCACATAAAGTGAATGGTGCAAATTTTGAGTACCAAATATCTGAGGATTTCATGATGGAAGGGAAAAAAAAGAGGCTTTATTTCAAGGTTTGGCTTAATGAAGATGACAATGAAGTCCAGTGCAATTGTCGCATGTTTGAGTTTAGAGGCATATTATGCCGTCATACAATATATGTTTTTCTTCGCCACAACATTGACTTGATTCCAGAAAAATATATAATGCGAAGATGGAGGAAGGATGTGAAAAGATGTCACACAAGGATTGAAATCAATTATGAAAGCTATAGTCTCGCACCTGAAGCACAACGATGTCATAAGATGCAAAAGGCTTTTGATGAGATTAAGGAATTGGCAAATGATTCTGACAATAAGTGCATGATTGTGATGACTTGGATGGATAATTCACCTATTGGCAGGAACATTGAGAATGATGTTAGTTCAATTCCGAATGCAAGTCAATGTATTCTTACTCCCTTAGCAGCTAGAAAGAAAGGCCGTCCACCATTTAAAAGGAGGAAATCTCAGTTGGAACAAGCAGTTAGGAAGAAACAAGATAGTAAAAAGAAGAAACAAGAGAGTAACAAGAAGATCAAATCTTGTGGAAACAACACTAATGGAGAGAAAGAACTGAATGTATGCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

716

Amino Acids

84.0

Weight (kDa)

8.62

Isoelectric Point (pI)

57.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000252)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80010
fragaria_vesca FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1410
AasI GACNNNNNNGTC 1 cut(s) 1616
Acc36I ACCTGC 1 cut(s) 293
Acc65I GGTACC 1 cut(s) 1195
AccB1I GGYRCC 1 cut(s) 1195
AccI GTMKAC 1 cut(s) 1235
AciI CCGC 1 cut(s) 707
AclI AACGTT 1 cut(s) 1189
AcsI RAATTY 6 cut(s) 625, 631, 719, 1285, 1460, 1525
AcuI CTGAAG 1 cut(s) 1821
AfaI GTAC 2 cut(s) 1197, 1535
AfiI CCNNNNNNNGG 2 cut(s) 77, 791
AflIII ACRYGT 1 cut(s) 890
AjuI GAANNNNNNNTTGG 6 cut(s) 588, 620, 667, 699, 2012, 2044
AloI GAACNNNNNNTCC 2 cut(s) 394, 426
AluBI AGCT 8 cut(s) 290, 449, 471, 494, 620, 1052, 1785, 1985
AluI AGCT 8 cut(s) 290, 449, 471, 494, 620, 1052, 1785, 1985
Alw21I GWGCWC 1 cut(s) 906
Alw26I GTCTC 3 cut(s) 550, 1177, 1796
Ama87I CYCGRG 1 cut(s) 72
AoxI GGCC 2 cut(s) 499, 1996
ApeKI GCWGC 1 cut(s) 1982
ApoI RAATTY 6 cut(s) 625, 631, 719, 1285, 1460, 1525
ArsI GACNNNNNNTTYG 2 cut(s) 761, 793
AseI ATTAAT 1 cut(s) 1475
Asp718I GGTACC 1 cut(s) 1195
AspA2I CCTAGG 1 cut(s) 911
AspS9I GGNCC 1 cut(s) 499
AsuHPI GGTGA 2 cut(s) 29, 1899
AvaI CYCGRG 1 cut(s) 72
AvrII CCTAGG 1 cut(s) 911
BanI GGYRCC 1 cut(s) 1195
BbsI GAAGAC 1 cut(s) 1368
Bbv12I GWGCWC 1 cut(s) 906
BbvI GCAGC 1 cut(s) 1994
BccI CCATC 6 cut(s) 8, 311, 656, 1552, 1725, 1891
BceAI ACGGC 3 cut(s) 581, 1647, 1983
BcgI CGANNNNNNTGC 2 cut(s) 569, 603
BclI TGATCA 2 cut(s) 349, 928
BcoDI GTCTC 3 cut(s) 550, 1177, 1796
BfaI CTAG 5 cut(s) 291, 912, 978, 1020, 1986
BfmI CTRYAG 1 cut(s) 1786
BfuAI ACCTGC 1 cut(s) 293
BisI GCNGC 2 cut(s) 708, 1983
BlnI CCTAGG 1 cut(s) 911
BlsI GCNGC 2 cut(s) 709, 1984
BmeT110I CYCGRG 1 cut(s) 72
BmgT120I GGNCC 1 cut(s) 499
BmiI GGNNCC 3 cut(s) 36, 500, 1197
BmsI GCATC 4 cut(s) 571, 682, 847, 1812
BpiI GAAGAC 1 cut(s) 1368
BplI GAGNNNNNCTC 4 cut(s) 497, 529, 2008, 2040
Bpu10I CCTNAGC 1 cut(s) 1978
BpuEI CTTGAG 1 cut(s) 1413
BsaBI GATNNNNATC 2 cut(s) 654, 1769
BsaJI CCNNGG 2 cut(s) 375, 911
BsaXI ACNNNNNCTCC 2 cut(s) 717, 747
Bsc4I CCNNNNNNNGG 2 cut(s) 77, 791
Bse1I ACTGG 1 cut(s) 1621
Bse8I GATNNNNATC 2 cut(s) 654, 1769
BseDI CCNNGG 2 cut(s) 375, 911
BseGI GGATG 7 cut(s) 87, 262, 833, 1126, 1379, 1747, 1902
BseJI GATNNNNATC 2 cut(s) 654, 1769
BseLI CCNNNNNNNGG 2 cut(s) 77, 791
BseMII CTCAG 2 cut(s) 1536, 2039
BseNI ACTGG 1 cut(s) 1621
BseRI GAGGAG 1 cut(s) 47
BseXI GCAGC 1 cut(s) 1994
BseYI CCCAGC 1 cut(s) 494
BshFI GGCC 2 cut(s) 501, 1998
BshNI GGYRCC 1 cut(s) 1195
BsiHKAI GWGCWC 1 cut(s) 906
BsiHKCI CYCGRG 1 cut(s) 72
BslI CCNNNNNNNGG 2 cut(s) 77, 791
BsmAI GTCTC 3 cut(s) 550, 1177, 1796
BsmBI CGTCTC 1 cut(s) 550
BsmI GAATGC 2 cut(s) 1267, 1957
BsnI GGCC 2 cut(s) 501, 1998
BsoBI CYCGRG 1 cut(s) 72
Bsp1286I GDGCHC 1 cut(s) 906
Bsp143I GATC 5 cut(s) 330, 349, 655, 928, 2091
BspACI CCGC 1 cut(s) 707
BspANI GGCC 2 cut(s) 501, 1998
BspCNI CTCAG 2 cut(s) 1537, 2038
BspHI TCATGA 2 cut(s) 1465, 1554
BspLI GGNNCC 3 cut(s) 36, 500, 1197
BspMI ACCTGC 1 cut(s) 293
BspQI GCTCTTC 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 1195
BsrI ACTGG 1 cut(s) 1621
BssECI CCNNGG 2 cut(s) 375, 911
BssMI GATC 5 cut(s) 330, 349, 655, 928, 2091
BssT1I CCWWGG 2 cut(s) 375, 911
Bst4CI ACNGT 2 cut(s) 1034, 1308
Bst6I CTCTTC 2 cut(s) 60, 152
BstAPI GCANNNNNTGC 1 cut(s) 1659
BstC8I GCNNGC 2 cut(s) 618, 906
BstDEI CTNAG 5 cut(s) 313, 1290, 1545, 1978, 2025
BstF5I GGATG 7 cut(s) 87, 262, 833, 1126, 1379, 1747, 1902
BstKTI GATC 5 cut(s) 333, 352, 658, 931, 2094
BstMAI GTCTC 3 cut(s) 550, 1177, 1796
BstMBI GATC 5 cut(s) 330, 349, 655, 928, 2091
BstMWI GCNNNNNNNGC 3 cut(s) 1632, 1659, 1802
BstNSI RCATGY 3 cut(s) 775, 894, 1639
BstSFI CTRYAG 1 cut(s) 1786
BstV1I GCAGC 1 cut(s) 1994
BstV2I GAAGAC 1 cut(s) 1368
BsuRI GGCC 2 cut(s) 501, 1998
BtgZI GCGATG 1 cut(s) 594
BtsCI GGATG 7 cut(s) 87, 262, 833, 1126, 1379, 1747, 1902
BtsIMutI CAGTG 1 cut(s) 1628
BveI ACCTGC 1 cut(s) 293
Cac8I GCNNGC 2 cut(s) 618, 906
CciI TCATGA 2 cut(s) 1465, 1554
Cfr13I GGNCC 1 cut(s) 499
Csp6I GTAC 2 cut(s) 1196, 1534
CspCI CAANNNNNGTGG 2 cut(s) 2083, 2118
CviQI GTAC 2 cut(s) 1196, 1534
DdeI CTNAG 5 cut(s) 313, 1290, 1545, 1978, 2025
DpnI GATC 5 cut(s) 332, 351, 657, 930, 2093
DpnII GATC 5 cut(s) 330, 349, 655, 928, 2091
DraI TTTAAA 2 cut(s) 1302, 2011
DrdI GACNNNNNNGTC 1 cut(s) 1616
DseDI GACNNNNNNGTC 1 cut(s) 1616
Eam1104I CTCTTC 2 cut(s) 60, 152
EarI CTCTTC 2 cut(s) 60, 152
Eco130I CCWWGG 2 cut(s) 375, 911
Eco57I CTGAAG 1 cut(s) 1821
Eco88I CYCGRG 1 cut(s) 72
EcoT14I CCWWGG 2 cut(s) 375, 911
EcoT22I ATGCAT 3 cut(s) 900, 1267, 1333
ErhI CCWWGG 2 cut(s) 375, 911
Esp3I CGTCTC 1 cut(s) 550
FbaI TGATCA 2 cut(s) 349, 928
FblI GTMKAC 1 cut(s) 1235
Fnu4HI GCNGC 2 cut(s) 708, 1983
FokI GGATG 7 cut(s) 94, 249, 840, 1133, 1366, 1754, 1909
Fsp4HI GCNGC 2 cut(s) 708, 1983
FspBI CTAG 5 cut(s) 291, 912, 978, 1020, 1986
GluI GCNGC 2 cut(s) 708, 1983
GsaI CCCAGC 1 cut(s) 498
HaeIII GGCC 2 cut(s) 501, 1998
HinfI GANTC 3 cut(s) 367, 1705, 1862
HphI GGTGA 2 cut(s) 29, 1899
Hpy166II GTNNAC 3 cut(s) 1236, 1438, 2003
Hpy188I TCNGA 5 cut(s) 402, 609, 1546, 1867, 1950
Hpy188III TCNNGA 7 cut(s) 218, 659, 932, 1430, 1466, 1555, 1709
Hpy8I GTNNAC 3 cut(s) 1236, 1438, 2003
HpyAV CCTTC 8 cut(s) 176, 215, 315, 569, 1090, 1106, 1556, 1732
HpyCH4III ACNGT 2 cut(s) 1034, 1308
HpyCH4IV ACGT 1 cut(s) 1189
HpyF10VI GCNNNNNNNGC 3 cut(s) 1632, 1659, 1802
HpyF3I CTNAG 5 cut(s) 313, 1290, 1545, 1978, 2025
HpySE526I ACGT 1 cut(s) 1189
KpnI GGTACC 1 cut(s) 1199
Ksp22I TGATCA 2 cut(s) 349, 928
Kzo9I GATC 5 cut(s) 330, 349, 655, 928, 2091
LguI GCTCTTC 1 cut(s) 60
LmnI GCTCC 4 cut(s) 34, 787, 913, 1315
Lsp1109I GCAGC 1 cut(s) 1994
LweI GCATC 4 cut(s) 571, 682, 847, 1812
MaeI CTAG 5 cut(s) 291, 912, 978, 1020, 1986
MaeII ACGT 1 cut(s) 1189
MaeIII GTNAC 6 cut(s) 199, 733, 1034, 1143, 1754, 2081
MalI GATC 5 cut(s) 332, 351, 657, 930, 2093
MboI GATC 5 cut(s) 330, 349, 655, 928, 2091
MfeI CAATTG 2 cut(s) 645, 1627
MhlI GDGCHC 1 cut(s) 906
MlyI GAGTC 1 cut(s) 376
MmeI TCCRAC 2 cut(s) 395, 2010
Mph1103I ATGCAT 3 cut(s) 900, 1267, 1333
MslI CAYNNNNRTG 4 cut(s) 357, 893, 1810, 1883
MunI CAATTG 2 cut(s) 645, 1627
Mva1269I GAATGC 2 cut(s) 1267, 1957
MwoI GCNNNNNNNGC 3 cut(s) 1632, 1659, 1802
NdeII GATC 5 cut(s) 330, 349, 655, 928, 2091
NlaIV GGNNCC 3 cut(s) 36, 500, 1197
NmuCI GTSAC 2 cut(s) 199, 1754
NsiI ATGCAT 3 cut(s) 900, 1267, 1333
NspI RCATGY 3 cut(s) 775, 894, 1639
PaeR7I CTCGAG 1 cut(s) 72
PagI TCATGA 2 cut(s) 1465, 1554
PciI ACATGT 1 cut(s) 890
PciSI GCTCTTC 1 cut(s) 60
PcsI WCGNNNNNNNCGW 1 cut(s) 388
PctI GAATGC 2 cut(s) 1267, 1957
PfeI GAWTC 2 cut(s) 1705, 1862
PkrI GCNGC 2 cut(s) 709, 1984
PleI GAGTC 1 cut(s) 375
PpsI GAGTC 1 cut(s) 375
PscI ACATGT 1 cut(s) 890
PshBI ATTAAT 1 cut(s) 1475
PsiI TTATAA 1 cut(s) 1410
Psp1406I AACGTT 1 cut(s) 1189
PspFI CCCAGC 1 cut(s) 494
PspN4I GGNNCC 3 cut(s) 36, 500, 1197
PspPI GGNCC 1 cut(s) 499
PspXI VCTCGAGB 1 cut(s) 72
RsaI GTAC 2 cut(s) 1197, 1535
RsaNI GTAC 2 cut(s) 1196, 1534
RseI CAYNNNNRTG 4 cut(s) 357, 893, 1810, 1883
SapI GCTCTTC 1 cut(s) 60
SatI GCNGC 2 cut(s) 708, 1983
Sau3AI GATC 5 cut(s) 330, 349, 655, 928, 2091
Sau96I GGNCC 1 cut(s) 499
SchI GAGTC 1 cut(s) 376
SduI GDGCHC 1 cut(s) 906
SfaNI GCATC 4 cut(s) 571, 682, 847, 1812
SfcI CTRYAG 1 cut(s) 1786
Sfr274I CTCGAG 1 cut(s) 72
SlaI CTCGAG 1 cut(s) 72
SmiMI CAYNNNNRTG 4 cut(s) 357, 893, 1810, 1883
SmlI CTYRAG 2 cut(s) 72, 1428
SmoI CTYRAG 2 cut(s) 72, 1428
SsiI CCGC 1 cut(s) 707
SspMI CTAG 5 cut(s) 291, 912, 978, 1020, 1986
StyI CCWWGG 2 cut(s) 375, 911
TaaI ACNGT 2 cut(s) 1034, 1308
TaiI ACGT 1 cut(s) 1192
TaqI TCGA 3 cut(s) 73, 217, 391
TauI GCSGC 1 cut(s) 710
TfiI GAWTC 2 cut(s) 1705, 1862
TscAI CASTG 1 cut(s) 1628
TseFI GTSAC 2 cut(s) 199, 1754
TseI GCWGC 1 cut(s) 1982
Tsp45I GTSAC 2 cut(s) 199, 1754
TspRI CASTG 1 cut(s) 1628
VspI ATTAAT 1 cut(s) 1475
XapI RAATTY 6 cut(s) 625, 631, 719, 1285, 1460, 1525
XceI RCATGY 3 cut(s) 775, 894, 1639
XhoI CTCGAG 1 cut(s) 72
XmaJI CCTAGG 1 cut(s) 911
XmiI GTMKAC 1 cut(s) 1235
XspI CTAG 5 cut(s) 291, 912, 978, 1020, 1986
Zsp2I ATGCAT 3 cut(s) 900, 1267, 1333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.