FvH4_2g28851

Protein FAR1-RELATED SEQUENCE 6-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000252
Physical Location & Seq
Forward (+)
22516454 .. 22519868
3415 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g28851.t3

Sequence Viewer

Length: 2004 bp
ATGGAAGAAGTTTGTCTCAACAGCGAGCCAGTGTTTGATGAAGGTGATGAGTATGACTTGGAGGGAGGGCATGATGCTGGAAATGGGGAAACACAATGTAAACAGGTCTCCCCACAACCTACTGTCGGTTTGGAGTTTGACTCTTTTGACGAAGCCTATGATTTCTACAATCTCTATGGTAAAGAACAGGGATTTGGCATTAGAGTGAGCAATTCATGGTTCAGGTCAAAGAGAAAAGAGCGATATAGAGCAAAATTAAGTTGCAGCAGTGCAGGTTTCAAGAAAAAGAGTGATGCAAACAATCCAAGACCAGAGACAAGAACCGGTTGTCCTGCAATGATAGTTATCAAGCTTGTGGACTCCCAAAGGTGGAGAATAGTTGAATCAGAGCTTCAACACAACCATCAGGTGAGTCCACAGATCAAAAGGTTTTACAAGTCGCATAAAAAAATGATCATTGCTGCCAAAAATGCACAGCCGCAGCCAGATCCTGTCACAGAAGTTCATACTATCAAGCTATATCGAACATCTGTTATGGATGTTGGGTGCAATGGATGTTCAACCTTAAGTGAAACTGAAGGTTTAAATCCTATTGATCACTCTCAGCACTTGGAACTTAGAGAAGGAGATGCTCATGCAGTTTACAACTACTTTTGTCGAATGAAATTGACGAATCCTAATTTTTATTATTTGATGGATCTAGATGATGATGGACGTCTGAGGAATGTATTTTGGGCTGATGCCAGGTCCAGGGCTGCATATGGATACTTCTGTGATACTGTAGCCATAGACACAACGTGCTTGGCAAACAAATATGAACTCCCCCTGATTTCATTTGTTGGTGTAAACCATCATGGACAATCTGTGCTGTTCGGCTGTGGCTTCCTTGGGGTTAAGTCAGTGGATTGTTATGTTTGGATGCTCCGTGCATGGCTTAAATGCATGCTAGGGCGCCCTCCACAGGTTTTCATTACGGACAAATGCAAACGGTTGCAAAATGCAGTGTCTGAGGTGATCCCAGAGGCTCGCCATTGCTGTTGTTTGTCGTATATCACACAGAAGGTTCCAGAGAAGTTGGGAGGACTGAAGGGATATGAAGCAATCAGAAGACACTTGCACAAAGCAATCTATGATTCCTTGAAAATAGCTGAGTTTGAAACTTCGTGGGCTGAAATGATCAAACGGCATGAACTTGGGAATAACAAATGGCTTCAGCAATTGTATGAGGATCGGCAAAACTGGGTTCCAGTGTACTTGAAAGACACATTTTTTGCGGGAATGATCCCTATCCGCGAAAGTGAGAGCTTGCCTGCATTTTTTGATGGTTATGTGCATAAACATACGTCTTTCAAGGAGTTTGTCGATAAGTATGACCTTGCTCTTCATAGGAAGCGCATGAAAGAGGTGGTGGCAGATCAGGAGTCGAGAACGTCAAGCTTTGAATTGAAAACAAGATGCAATTTTGAAGTGCAACTATGTAAAGTGTACACAAAGGAAATATTCAGGAGGTTCCAGTTGGAGGTTGAGGGAATGTACTCCTGCTTCAATACAAGGCAGGTCAATGTTAATGGTCCTATAATAACCTACATAGTCAAAGAACGAGTTGAAGTTGAAGGAAACGAGAAGGAAGTAAGATGCTATGAGGTTTTGTATGAGACAACACAAGTGGATATCCGATGCATCTGCAGTTTGTTCAACTACAAAGGGTATCTGTGCAGGCATGCCTTAAACGTTCTAAATTACAATGGCGTGGAAGTGATCCCGTCACGATACATATTACCACGGTGGAGCAAAAATTTCAAGTGCACGCATCTTCTGCATCAAGGATCAAGTAGTAATGATGTGTATGACCCGGCATACTGGTGTGATCATCTTTATAAGCTCGCCCTTCCAGTTGCAGAAGAAGGGGCACAATCTGAGGAACATTATAAGACGACCTTGCAAGCGTTGGAGAAGCTGTTGAACAAGTTTCATCTTGTAGAGGACACCCTCAATGAAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FAR1 MULE SWIM

Protein Analysis

668

Amino Acids

77.32

Weight (kDa)

6.77

Isoelectric Point (pI)

40.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 54 - 138 1.8e-22 FAR1 DNA-binding domain
MULE PF10551 261 - 354 7e-25 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000252)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G80010
fragaria_vesca FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1878, 1929
AatII GACGTC 1 cut(s) 718
Acc36I ACCTGC 2 cut(s) 263, 1546
AccB1I GGYRCC 1 cut(s) 951
AccII CGCG 1 cut(s) 1293
AciI CCGC 3 cut(s) 479, 1274, 1291
AclI AACGTT 1 cut(s) 1731
AclWI GGATC 7 cut(s) 482, 705, 1009, 1236, 1276, 1753, 1834
AcsI RAATTY 1 cut(s) 1795
AcuI CTGAAG 3 cut(s) 597, 1106, 1196
AcyI GRCGYC 2 cut(s) 715, 952
AdeI CACNNNGTG 1 cut(s) 798
AfaI GTAC 3 cut(s) 1253, 1487, 1535
AfiI CCNNNNNNNGG 5 cut(s) 125, 369, 750, 961, 1519
AflII CTTAAG 1 cut(s) 565
AgeI ACCGGT 1 cut(s) 323
AjnI CCWGG 2 cut(s) 743, 749
AjuI GAANNNNNNNTTGG 2 cut(s) 177, 209
AloI GAACNNNNNNTCC 2 cut(s) 313, 345
AluBI AGCT 8 cut(s) 352, 391, 517, 1148, 1305, 1437, 1882, 1957
AluI AGCT 8 cut(s) 352, 391, 517, 1148, 1305, 1437, 1882, 1957
Alw21I GWGCWC 1 cut(s) 1808
Alw26I GTCTC 4 cut(s) 20, 112, 308, 1649
Alw44I GTGCAC 1 cut(s) 1804
AlwI GGATC 7 cut(s) 482, 705, 1009, 1236, 1276, 1753, 1834
AlwNI CAGNNNCTG 2 cut(s) 491, 1007
ApaLI GTGCAC 1 cut(s) 1804
ApeKI GCWGC 4 cut(s) 264, 461, 481, 755
ApoI RAATTY 1 cut(s) 1795
ArsI GACNNNNNNTTYG 2 cut(s) 1253, 1285
AsiGI ACCGGT 1 cut(s) 323
AspLEI GCGC 2 cut(s) 954, 1395
AspS9I GGNCC 2 cut(s) 747, 1571
AsuC2I CCSGG 1 cut(s) 1853
AsuHPI GGTGA 3 cut(s) 56, 421, 1024
AvaII GGWCC 2 cut(s) 747, 1571
BaeGI GKGCMC 2 cut(s) 1808, 1912
BaeI ACNNNNGTAYC 2 cut(s) 757, 790
BanI GGYRCC 1 cut(s) 951
BarI GAAGNNNNNNTAC 2 cut(s) 1526, 1558
BbsI GAAGAC 1 cut(s) 1114
Bbv12I GWGCWC 1 cut(s) 1808
BbvI GCAGC 4 cut(s) 276, 448, 493, 742
BccI CCATC 5 cut(s) 411, 688, 704, 858, 1316
BceAI ACGGC 1 cut(s) 1199
BcgI CGANNNNNNTGC 2 cut(s) 1665, 1699
BciT130I CCWGG 2 cut(s) 745, 751
BciVI GTATCC 1 cut(s) 758
BclI TGATCA 4 cut(s) 453, 595, 1176, 1867
BcnI CCSGG 1 cut(s) 1853
BcoDI GTCTC 4 cut(s) 20, 112, 308, 1649
BfaI CTAG 2 cut(s) 701, 947
BfmI CTRYAG 2 cut(s) 780, 1684
BfoI RGCGCY 1 cut(s) 955
BfrI CTTAAG 1 cut(s) 565
BfuAI ACCTGC 2 cut(s) 263, 1546
BfuI GTATCC 1 cut(s) 758
BisI GCNGC 5 cut(s) 265, 462, 479, 482, 756
BlsI GCNGC 5 cut(s) 266, 463, 480, 483, 757
Bme1390I CCNGG 3 cut(s) 745, 751, 1853
Bme18I GGWCC 2 cut(s) 747, 1571
BmgT120I GGNCC 2 cut(s) 747, 1571
BmiI GGNNCC 4 cut(s) 953, 1065, 1245, 1511
BmrFI CCNGG 3 cut(s) 745, 751, 1853
BmrI ACTGGG 1 cut(s) 1249
BmuI ACTGGG 1 cut(s) 1249
BpiI GAAGAC 1 cut(s) 1114
BplI GAGNNNNNCTC 2 cut(s) 125, 157
BpuMI CCSGG 1 cut(s) 1853
BsaBI GATNNNNATC 2 cut(s) 344, 1286
BsaHI GRCGYC 2 cut(s) 715, 952
BsaI GGTCTC 1 cut(s) 112
BsaJI CCNNGG 3 cut(s) 750, 886, 1781
BsaWI WCCGGW 1 cut(s) 323
BsaXI ACNNNNNCTCC 2 cut(s) 1943, 1973
Bsc4I CCNNNNNNNGG 5 cut(s) 125, 369, 750, 961, 1519
Bse118I RCCGGY 1 cut(s) 323
Bse1I ACTGG 6 cut(s) 29, 1244, 1247, 1513, 1865, 1892
Bse3DI GCAATG 4 cut(s) 342, 456, 556, 1030
Bse8I GATNNNNATC 2 cut(s) 344, 1286
BseBI CCWGG 2 cut(s) 745, 751
BseDI CCNNGG 3 cut(s) 750, 886, 1781
BseGI GGATG 3 cut(s) 544, 560, 924
BseJI GATNNNNATC 2 cut(s) 344, 1286
BseLI CCNNNNNNNGG 5 cut(s) 125, 369, 750, 961, 1519
BseMI GCAATG 4 cut(s) 342, 456, 556, 1030
BseMII CTCAG 5 cut(s) 617, 710, 999, 1140, 1908
BseNI ACTGG 6 cut(s) 29, 1244, 1247, 1513, 1865, 1892
BseSI GKGCMC 2 cut(s) 1808, 1912
BseXI GCAGC 4 cut(s) 276, 448, 493, 742
BsgI GTGCAG 2 cut(s) 291, 1735
Bsh1236I CGCG 1 cut(s) 1293
BshNI GGYRCC 1 cut(s) 951
BshTI ACCGGT 1 cut(s) 323
BsiHKAI GWGCWC 1 cut(s) 1808
BsiSI CCGG 2 cut(s) 324, 1853
BslI CCNNNNNNNGG 5 cut(s) 125, 369, 750, 961, 1519
BsmAI GTCTC 4 cut(s) 20, 112, 308, 1649
Bso31I GGTCTC 1 cut(s) 112
Bsp1286I GDGCHC 2 cut(s) 1808, 1912
Bsp1407I TGTACA 1 cut(s) 1485
BspACI CCGC 3 cut(s) 479, 1274, 1291
BspCNI CTCAG 5 cut(s) 616, 711, 1000, 1141, 1909
BspFNI CGCG 1 cut(s) 1293
BspLI GGNNCC 4 cut(s) 953, 1065, 1245, 1511
BspMAI CTGCAG 1 cut(s) 1688
BspMI ACCTGC 2 cut(s) 263, 1546
BspPI GGATC 7 cut(s) 482, 705, 1009, 1236, 1276, 1753, 1834
BspQI GCTCTTC 1 cut(s) 1386
BspT107I GGYRCC 1 cut(s) 951
BspTI CTTAAG 1 cut(s) 565
BspTNI GGTCTC 1 cut(s) 112
BsrDI GCAATG 4 cut(s) 342, 456, 556, 1030
BsrFI RCCGGY 1 cut(s) 323
BsrGI TGTACA 1 cut(s) 1485
BsrI ACTGG 6 cut(s) 29, 1244, 1247, 1513, 1865, 1892
BssAI RCCGGY 1 cut(s) 323
BssECI CCNNGG 3 cut(s) 750, 886, 1781
BssNI GRCGYC 2 cut(s) 715, 952
BssT1I CCWWGG 1 cut(s) 886
Bst2UI CCWGG 2 cut(s) 745, 751
Bst4CI ACNGT 4 cut(s) 124, 781, 990, 1785
Bst6I CTCTTC 1 cut(s) 1386
BstACI GRCGYC 2 cut(s) 715, 952
BstAFI CTTAAG 1 cut(s) 565
BstAPI GCANNNNNTGC 1 cut(s) 1816
BstAUI TGTACA 1 cut(s) 1485
BstDEI CTNAG 6 cut(s) 603, 617, 719, 1008, 1149, 1917
BstDSI CCRYGG 1 cut(s) 1781
BstF5I GGATG 3 cut(s) 544, 560, 924
BstFNI CGCG 1 cut(s) 1293
BstH2I RGCGCY 1 cut(s) 955
BstHHI GCGC 2 cut(s) 954, 1395
BstMAI GTCTC 4 cut(s) 20, 112, 308, 1649
BstMWI GCNNNNNNNGC 2 cut(s) 470, 1816
BstNI CCWGG 2 cut(s) 745, 751
BstNSI RCATGY 2 cut(s) 946, 1724
BstSCI CCNGG 3 cut(s) 743, 749, 1851
BstSFI CTRYAG 2 cut(s) 780, 1684
BstSLI GKGCMC 2 cut(s) 1808, 1912
BstUI CGCG 1 cut(s) 1293
BstV1I GCAGC 4 cut(s) 276, 448, 493, 742
BstV2I GAAGAC 1 cut(s) 1114
BstX2I RGATCY 2 cut(s) 487, 697
BstYI RGATCY 2 cut(s) 487, 697
BsuI GTATCC 1 cut(s) 758
BtgI CCRYGG 1 cut(s) 1781
BtsCI GGATG 3 cut(s) 544, 560, 924
BtsI GCAGTG 2 cut(s) 274, 1008
BtsIMutI CAGTG 5 cut(s) 36, 274, 906, 1008, 1254
BveI ACCTGC 2 cut(s) 263, 1546
CaiI CAGNNNCTG 2 cut(s) 491, 1007
CfoI GCGC 2 cut(s) 954, 1395
Cfr10I RCCGGY 1 cut(s) 323
Cfr13I GGNCC 2 cut(s) 747, 1571
Csp6I GTAC 3 cut(s) 1252, 1486, 1534
CspAI ACCGGT 1 cut(s) 323
CspCI CAANNNNNGTGG 2 cut(s) 1647, 1682
CviAII CATG 9 cut(s) 71, 216, 635, 854, 930, 943, 1187, 1396, 1721
CviQI GTAC 3 cut(s) 1252, 1486, 1534
DdeI CTNAG 6 cut(s) 603, 617, 719, 1008, 1149, 1917
DinI GGCGCC 1 cut(s) 953
DraI TTTAAA 1 cut(s) 585
DraIII CACNNNGTG 1 cut(s) 798
Eam1104I CTCTTC 1 cut(s) 1386
EarI CTCTTC 1 cut(s) 1386
Eco130I CCWWGG 1 cut(s) 886
Eco31I GGTCTC 1 cut(s) 112
Eco32I GATATC 1 cut(s) 1672
Eco47I GGWCC 2 cut(s) 747, 1571
Eco57I CTGAAG 3 cut(s) 597, 1106, 1196
EcoRII CCWGG 2 cut(s) 743, 749
EcoRV GATATC 1 cut(s) 1672
EcoT14I CCWWGG 1 cut(s) 886
EcoT22I ATGCAT 2 cut(s) 944, 1682
EgeI GGCGCC 1 cut(s) 953
EheI GGCGCC 1 cut(s) 953
ErhI CCWWGG 1 cut(s) 886
FaeI CATG 9 cut(s) 74, 219, 638, 857, 933, 946, 1190, 1399, 1724
FalI AAGNNNNNCTT 2 cut(s) 1922, 1954
FatI CATG 9 cut(s) 70, 215, 634, 853, 929, 942, 1186, 1395, 1720
FauI CCCGC 1 cut(s) 1267
FauNDI CATATG 1 cut(s) 760
FbaI TGATCA 4 cut(s) 453, 595, 1176, 1867
Fnu4HI GCNGC 5 cut(s) 265, 462, 479, 482, 756
FokI GGATG 3 cut(s) 551, 567, 931
Fsp4HI GCNGC 5 cut(s) 265, 462, 479, 482, 756
FspBI CTAG 2 cut(s) 701, 947
GlaI GCGC 2 cut(s) 953, 1394
GluI GCNGC 5 cut(s) 265, 462, 479, 482, 756
HaeII RGCGCY 1 cut(s) 955
HapII CCGG 2 cut(s) 324, 1853
HhaI GCGC 2 cut(s) 954, 1395
Hin1I GRCGYC 2 cut(s) 715, 952
Hin1II CATG 9 cut(s) 74, 219, 638, 857, 933, 946, 1190, 1399, 1724
Hin6I GCGC 2 cut(s) 952, 1393
HinP1I GCGC 2 cut(s) 952, 1393
HindIII AAGCTT 2 cut(s) 350, 1435
HinfI GANTC 7 cut(s) 140, 359, 383, 412, 673, 1133, 1421
HpaII CCGG 2 cut(s) 324, 1853
HphI GGTGA 3 cut(s) 56, 421, 1024
Hpy166II GTNNAC 9 cut(s) 101, 358, 416, 643, 847, 1252, 1486, 1488, 1806
Hpy188I TCNGA 6 cut(s) 388, 720, 1009, 1106, 1676, 1918
Hpy188III TCNNGA 7 cut(s) 280, 701, 1067, 1418, 1425, 1504, 1767
Hpy8I GTNNAC 9 cut(s) 101, 358, 416, 643, 847, 1252, 1486, 1488, 1806
HpyAV CCTTC 9 cut(s) 35, 572, 617, 1054, 1081, 1607, 1618, 1898, 1898
HpyCH4III ACNGT 4 cut(s) 124, 781, 990, 1785
HpyCH4IV ACGT 5 cut(s) 715, 797, 1343, 1430, 1731
HpyF10VI GCNNNNNNNGC 2 cut(s) 470, 1816
HpyF3I CTNAG 6 cut(s) 603, 617, 719, 1008, 1149, 1917
HpySE526I ACGT 5 cut(s) 715, 797, 1343, 1430, 1731
Hsp92I GRCGYC 2 cut(s) 715, 952
Hsp92II CATG 9 cut(s) 74, 219, 638, 857, 933, 946, 1190, 1399, 1724
HspAI GCGC 2 cut(s) 952, 1393
KasI GGCGCC 1 cut(s) 951
Ksp22I TGATCA 4 cut(s) 453, 595, 1176, 1867
LguI GCTCTTC 1 cut(s) 1386
LmnI GCTCC 2 cut(s) 927, 1788
Lsp1109I GCAGC 4 cut(s) 276, 448, 493, 742
MaeI CTAG 2 cut(s) 701, 947
MaeII ACGT 5 cut(s) 715, 797, 1343, 1430, 1731
MaeIII GTNAC 2 cut(s) 493, 1764
MboII GAAGA 5 cut(s) 17, 1119, 1373, 1805, 1913
MfeI CAATTG 1 cut(s) 1217
MflI RGATCY 2 cut(s) 487, 697
MhlI GDGCHC 2 cut(s) 1808, 1912
MluCI AATT 9 cut(s) 211, 254, 665, 679, 1217, 1442, 1459, 1738, 1795
Mly113I GGCGCC 1 cut(s) 952
MlyI GAGTC 4 cut(s) 134, 353, 421, 1430
MmeI TCCRAC 2 cut(s) 1497, 1929
Mph1103I ATGCAT 2 cut(s) 944, 1682
MseI TTAA 7 cut(s) 257, 566, 584, 894, 936, 1566, 1727
MslI CAYNNNNRTG 2 cut(s) 203, 1861
MspCI CTTAAG 1 cut(s) 565
MspI CCGG 2 cut(s) 324, 1853
MspR9I CCNGG 3 cut(s) 745, 751, 1853
MunI CAATTG 1 cut(s) 1217
MvaI CCWGG 2 cut(s) 745, 751
MvnI CGCG 1 cut(s) 1293
MwoI GCNNNNNNNGC 2 cut(s) 470, 1816
NarI GGCGCC 1 cut(s) 952
NciI CCSGG 1 cut(s) 1853
NdeI CATATG 1 cut(s) 760
NlaIII CATG 9 cut(s) 74, 219, 638, 857, 933, 946, 1190, 1399, 1724
NlaIV GGNNCC 4 cut(s) 953, 1065, 1245, 1511
NmuCI GTSAC 2 cut(s) 493, 1764
NsiI ATGCAT 2 cut(s) 944, 1682
NspI RCATGY 2 cut(s) 946, 1724
PaeI GCATGC 2 cut(s) 946, 1724
PciSI GCTCTTC 1 cut(s) 1386
PfeI GAWTC 3 cut(s) 383, 673, 1133
PinAI ACCGGT 1 cut(s) 323
PkrI GCNGC 5 cut(s) 266, 463, 480, 483, 757
PleI GAGTC 4 cut(s) 134, 353, 420, 1429
PluTI GGCGCC 1 cut(s) 955
PpsI GAGTC 4 cut(s) 134, 353, 420, 1429
PsiI TTATAA 2 cut(s) 1878, 1929
Psp1406I AACGTT 1 cut(s) 1731
Psp6I CCWGG 2 cut(s) 743, 749
PspGI CCWGG 2 cut(s) 743, 749
PspN4I GGNNCC 4 cut(s) 953, 1065, 1245, 1511
PspPI GGNCC 2 cut(s) 747, 1571
PstI CTGCAG 1 cut(s) 1688
PstNI CAGNNNCTG 2 cut(s) 491, 1007
PsuI RGATCY 2 cut(s) 487, 697
RsaI GTAC 3 cut(s) 1253, 1487, 1535
RsaNI GTAC 3 cut(s) 1252, 1486, 1534
RseI CAYNNNNRTG 2 cut(s) 203, 1861
SapI GCTCTTC 1 cut(s) 1386
SaqAI TTAA 7 cut(s) 257, 566, 584, 894, 936, 1566, 1727
SatI GCNGC 5 cut(s) 265, 462, 479, 482, 756
Sau96I GGNCC 2 cut(s) 747, 1571
SchI GAGTC 4 cut(s) 134, 353, 421, 1430
ScrFI CCNGG 3 cut(s) 745, 751, 1853
SduI GDGCHC 2 cut(s) 1808, 1912
SfcI CTRYAG 2 cut(s) 780, 1684
SfoI GGCGCC 1 cut(s) 953
SinI GGWCC 2 cut(s) 747, 1571
SmiMI CAYNNNNRTG 2 cut(s) 203, 1861
SmlI CTYRAG 1 cut(s) 565
SmoI CTYRAG 1 cut(s) 565
SphI GCATGC 2 cut(s) 946, 1724
Sse9I AATT 9 cut(s) 211, 254, 665, 679, 1217, 1442, 1459, 1738, 1795
SsiI CCGC 3 cut(s) 479, 1274, 1291
SspDI GGCGCC 1 cut(s) 951
SspI AATATT 1 cut(s) 1500
SspMI CTAG 2 cut(s) 701, 947
StyD4I CCNGG 3 cut(s) 743, 749, 1851
StyI CCWWGG 1 cut(s) 886
TaaI ACNGT 4 cut(s) 124, 781, 990, 1785
TaiI ACGT 5 cut(s) 718, 800, 1346, 1433, 1734
TaqI TCGA 4 cut(s) 523, 658, 1362, 1424
TasI AATT 9 cut(s) 211, 254, 665, 679, 1217, 1442, 1459, 1738, 1795
TatI WGTACW 3 cut(s) 1251, 1485, 1533
TauI GCSGC 1 cut(s) 481
TfiI GAWTC 3 cut(s) 383, 673, 1133
Tru1I TTAA 7 cut(s) 257, 566, 584, 894, 936, 1566, 1727
Tru9I TTAA 7 cut(s) 257, 566, 584, 894, 936, 1566, 1727
TscAI CASTG 5 cut(s) 36, 274, 906, 1008, 1254
TseFI GTSAC 2 cut(s) 493, 1764
TseI GCWGC 4 cut(s) 264, 461, 481, 755
Tsp45I GTSAC 2 cut(s) 493, 1764
TspGWI ACGGA 2 cut(s) 914, 989
TspRI CASTG 5 cut(s) 36, 274, 906, 1008, 1254
Vha464I CTTAAG 1 cut(s) 565
VneI GTGCAC 1 cut(s) 1804
VpaK11BI GGWCC 2 cut(s) 747, 1571
XapI RAATTY 1 cut(s) 1795
XbaI TCTAGA 1 cut(s) 700
XceI RCATGY 2 cut(s) 946, 1724
XspI CTAG 2 cut(s) 701, 947
ZraI GACGTC 1 cut(s) 716
Zsp2I ATGCAT 2 cut(s) 944, 1682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.