Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000252

Physical Location & Seq

Genomic Coordinates Reverse (-)

26138408 .. 26143437

Gene Structure 5030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1214600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2235 bp

ATGAACGGCGATGGCACTTTCTCTCCGATCGTCCAGGGTTTGTCAGCAGACCATGACCTCCACATCACCATAAAAGAAGGTTCTCCAAACAGTGAGCAACTGCTGGAGGATGAAAACAATGACCTTGAAAATGATTGCGAGCAATTGTTTGAGATTGAAGGCAATGAGGCTGAAAGTGAAAGAGATGATACAAGTGATCAATTTTTTGACATTGAAAGCAATGACCATGAGAATGACCAAGGTGATATCAATGAACAATTATTTGAAATTGAAGGCAATAACCATGAAATCAGCAGGGATGATAGAACGTTAATTGATGATCAAAATGGTGGATCTCAAGAAAAGGACTATCCCCCGCCCTTTGTGGGTTTGGAGTTTGATTCATACGATGATGCTTACAATTATTATAATTACTATGCCAAGGAACTTGGCTTTGCCATCAGGGTGAAATCTTCATGGACAAAACGTAACAGCAAAGAAAAGCGTGGTGCAGTGCTCTGTTGCAACTGTGAGGGTTTTAAAACAATTAAAGAAGCAAACAGTCGCAAGAAAGAAACAAGAACGGGCTGTCTGGCAATGATAAGGTTGAGGTTAGTGGAATCTACCAGATGGAGGGTGGATGAAGTCAAACTTGAACACAACCATTTATTCGATCCTGAAAGAGCTCAGAACTCCAAGTCGCACAAGAGGATGGATTTTGGGGCTAAAAGAAAGATGGAGTCAACCCCTGATGTTGAAGTACGTACGATCAAGTTATATCGGACACCTGTCGTGGATGCTGTTGGTTATGGATGCCCAAACTCCAACGAAGAAGAAATAAACAACCAGGTTGATCGGTTCAAGCGATTGAAACTCAAAAAAGGAGATGCTAGAGCTATGTACAATTATTTTTGTCGGGCTCAGCTAACTGATCCGAATTTTTTCTATGTGATTGATCTGAATGATGAAGGACATATGAGGAATGTGTTTTGGATTGACTCCAGGTCTAGGGCTGCATACAGTTATTTCAGTGACGTGGTTTCATTTGATACTACATGTCTGTCAAACAATTATGAGATTCCACTTGCTGCATTTGTTGGCGTAAATCACCATGGGCAAACTATTTTGCTTGGTTGTTGTTTGCTAGCTGATGAGACACCAGAAACATATATATGGTTATTTAGGGCATGGCTTACATGTATGTCTGGCCGCCCTCCACAAACGATCATCACAAGCCAGTGCAAGGCCCTGCAAAGTGCTATAGCCGAGGTTTTTCCTAGGGCTCATCATCGTCTTTGTTCTTCGCATGTTGTGCAAAGTATTCTTGAGAATATGGGAGCTATACAAGAATATGAGGCATTTCAGCTGATTTTGAGTACGACTGTATATGACTCTGTAAAAGTAGATGAGTTTGAATTGGCCTGGGAAGATATGGTTAAGAGATTCAGGATTAAGGATCGTGAGTTTATTCGAAGTCTGTTTGAAGATCGAGAGCGATGGGTTCCAGCTTACTCAAAGGACACATTTTTTGCTGTGATGCCCAACATTCAAAACGGTGAGTCGACGAACCCATTTTTCCATAGTTATATCCATCCGCAAACTTCTTTGGAAGAGTTCCTTAGTGTCTATGATGTAATTTTAGAAAAGAAGCGTCAGGAAGAAACTCATAATGATAATGAGTCCGGAGAATTGAGTTCAATGTTACGAACAGGATGCTATTATGAGTCGCAGCTCTCTAAGTTTTACACAAAAGATGTATTCAGAAAGTTTCAAGATGAGGTTTTGATGATGTCTTCTTGTTTTAGTATAACTCAAGTTCACACAAATGGACCAATTGTAACCTACATGATCAAAGAACGTGAAGGGGAGGAAATTCTGAGGGGTGTTAGGAACTTTGAAGTCATGTATGACAAAGCGGGGGCAGAAATTCGTTGTATGTGCAGCTGCTTTAATTTAAATGGCTACCTGTGCCGGCATGCCTTGTGTATCCTCAACTATAATGGTGTGGAAGAAATACCGTTTCAGTATATCTTGACGCGATGGAGGAAAGACTTTAAGCGGTTGTATGTTCCAAATCTTGGGAGTAATAATGTTGATATCACGAACCCAGTTCAGTGGTTTGATCATTTGTATAGAAGAGCAATGCAAGTTGTTCAGGAAGGGATGATTTCTCAGGATCATTATATGGTGTCTTGGCAGGCATTCAAAGAGACTCTGAACAAGGTCCGTCTTGTAGCAGACAAGCATGTACAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

745

Amino Acids

86.69

Weight (kDa)

5.18

Isoelectric Point (pI)

45.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	134 - 217	3.7e-24	FAR1 DNA-binding domain
MULE	PF10551	339 - 432	1.1e-29	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80010
fragaria_vesca	FvH4_2g24400 FvH4_2g24401 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_2g28851 FvH4_3g17011 FvH4_4g07801 FvH4_6g23211 FvH4_6g29411 FvH4_6g29411 FvH4_6g29411 FvH4_6g29432 FvH4_6g29432 FvH4_7g19111
malus_domestica	MD05G1027500.v1.1 MD08G1156300.v1.1 MD15G1127000.v1.1 MD17G1214400.v1.1 MD17G1214600.v1.1
prunus_persica	Prupe.1G268400_v2.0.a1 Prupe.1G482700_v2.0.a1 Prupe.2G013600_v2.0.a1 Prupe.2G072300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090300_v2.0.a1 Prupe.3G090500_v2.0.a1 Prupe.4G256500_v2.0.a1 Prupe.6G116200_v2.0.a1 Prupe.7G015200_v2.0.a1 Prupe.8G014900_v2.0.a1
pyrus_communis	pycom05g24990 pycom12g03510 pycom16g12560 pycom17g21900 pycom17g21920
rosa_chinensis	RchiOBHm_Chr2g0134881 RchiOBHm_Chr2g0134921 RchiOBHm_Chr6g0297621
rosa_laevigata	RLG00000011576 RLG00000012728 RLG00000013853 RLG00000014630 RLG00000019427 RLG00000019430 RLG00000020625
rosa_multiflora	Rmu_sc0001385.1_g000003 Rmu_sc0001541.1_g000005 Rmu_sc0001719.1_g000010 Rmu_sc0001719.1_g000011 Rmu_sc0002283.1_g000033 Rmu_sc0004350.1_g000004 Rmu_sc0004350.1_g000005 Rmu_sc0004406.1_g000014 Rmu_sc0004564.1_g000003 Rmu_sc0005198.1_g000003 Rmu_sc0005198.1_g000004 Rmu_sc0005198.1_g000005 Rmu_sc0023742.1_g000001 Rmu_sc0023743.1_g000001 Rmu_ssc0000291.1_g000011 Rmu_ssc0000291.1_g000012
rosa_roxburghii	Rroxscaffold_2G00109640 Rroxscaffold_2G00109680 Rroxscaffold_2G00114370 Rroxscaffold_2G00135950 Rroxscaffold_3G00225840 Rroxscaffold_3G00227000 Rroxscaffold_7G00170310 Rroxscaffold_7G00172860 Rroxscaffold_7G00179400 Rroxscaffold_7G00198760
rosa_rugosa	Rorug02G0321200 Rorug06G0274600 Rorug06G0274700 Rorug06G0274800 Rorug06G0274800 Rorug07G0274900 Rorug07G0275000 Rorug07G0340400
rosa_samantha	Rh2AG372600 Rh2AG373100 Rh2BG044500 Rh2BG378300 Rh2BG378700 Rh2CG315500 Rh2CG356800 Rh2CG357600 Rh2DG395100 Rh2DG395500 Rh2DG586300 Rh3BG359900 Rh4BG117400 Rh4BG117500 Rh4DG152400 Rh4DG152500 Rh6AG165100 Rh6AG385200 Rh6BG170300 Rh6BG170400 Rh6BG170500 Rh6BG173200 Rh6BG173300 Rh6BG208000 Rh6BG208100 Rh6BG393300 Rh6CG163800 Rh6CG163900 Rh6CG164000 Rh6CG167300 Rh6CG241900 Rh6CG399100 Rh6DG159100 Rh6DG159200 Rh6DG233500 Rh6DG385700 Rh7AG495200 Rh7AG495300 Rh7BG402900 Rh7BG466600 Rh7BG466700 Rh7DG479900
rosa_wichuraiana	Rw0G005930 Rw1G039690 Rw2G030340 Rw2G030400 Rw4G013030 Rw4G013040 Rw5G023130 Rw6G014200 Rw6G014280 Rw6G033560 Rw7G041860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	408
AccB7I	CCANNNNNTGG	1 cut(s)	2057
AccI	GTMKAC	1 cut(s)	1541
AccII	CGCG	1 cut(s)	2017
AccIII	TCCGGA	1 cut(s)	1661
AciI	CCGC	5 cut(s)	356, 1189, 1574, 1895, 2038
AclI	AACGTT	1 cut(s)	308
AclWI	GGATC	5 cut(s)	340, 647, 905, 1443, 2163
AcoI	YGGCCR	1 cut(s)	1186
AcsI	RAATTY	3 cut(s)	916, 1851, 1905
AfaI	GTAC	5 cut(s)	741, 745, 881, 1357, 2229
AfiI	CCNNNNNNNGG	5 cut(s)	365, 612, 987, 1222, 2057
AflIII	ACRYGT	2 cut(s)	1034, 1175
AhdI	GACNNNNNGTC	1 cut(s)	982
AjiI	CACGTC	1 cut(s)	1015
AjnI	CCWGG	4 cut(s)	33, 825, 980, 1400
AluBI	AGCT	9 cut(s)	665, 875, 904, 1127, 1319, 1345, 1487, 1711, 1923
AluI	AGCT	9 cut(s)	665, 875, 904, 1127, 1319, 1345, 1487, 1711, 1923
Alw21I	GWGCWC	2 cut(s)	498, 667
Alw26I	GTCTC	2 cut(s)	1127, 2183
AlwI	GGATC	5 cut(s)	340, 647, 905, 1443, 2163
Aor13HI	TCCGGA	1 cut(s)	1661
AoxI	GGCC	3 cut(s)	1186, 1224, 1398
ApeKI	GCWGC	5 cut(s)	992, 1067, 1708, 1920, 1923
ApoI	RAATTY	3 cut(s)	916, 1851, 1905
ArsI	GACNNNNNNTTYG	2 cut(s)	1490, 1522
Asp700I	GAANNNNTTC	1 cut(s)	920
AspA2I	CCTAGG	1 cut(s)	1256
AspS9I	GGNCC	3 cut(s)	1225, 1808, 2203
AsuHPI	GGTGA	5 cut(s)	58, 254, 457, 1079, 1547
AsuII	TTCGAA	1 cut(s)	1450
AsuNHI	GCTAGC	1 cut(s)	1123
AvaII	GGWCC	2 cut(s)	1808, 2203
AvrII	CCTAGG	1 cut(s)	1256
BanII	GRGCYC	3 cut(s)	667, 901, 1264
BbsI	GAAGAC	1 cut(s)	1764
Bbv12I	GWGCWC	2 cut(s)	498, 667
BbvI	GCAGC	5 cut(s)	979, 1054, 1720, 1910, 1932
BccI	CCATC	8 cut(s)	5, 446, 603, 685, 709, 1470, 1578, 2013
BceAI	ACGGC	1 cut(s)	22
BcgI	CGANNNNNNTGC	2 cut(s)	1674, 1708
BciT130I	CCWGG	4 cut(s)	35, 827, 982, 1402
BciVI	GTATCC	1 cut(s)	1976
BclI	TGATCA	4 cut(s)	196, 319, 1827, 2101
BcoDI	GTCTC	2 cut(s)	1127, 2183
BfaI	CTAG	4 cut(s)	870, 987, 1124, 1257
BfmI	CTRYAG	1 cut(s)	1239
BfuI	GTATCC	1 cut(s)	1976
BisI	GCNGC	6 cut(s)	993, 1068, 1189, 1709, 1921, 1924
BlnI	CCTAGG	1 cut(s)	1256
BlpI	GCTNAGC	1 cut(s)	900
BlsI	GCNGC	6 cut(s)	994, 1069, 1190, 1710, 1922, 1925
Bme1390I	CCNGG	4 cut(s)	35, 827, 982, 1402
Bme18I	GGWCC	2 cut(s)	1808, 2203
BmeRI	GACNNNNNGTC	1 cut(s)	982
BmgBI	CACGTC	1 cut(s)	1015
BmgT120I	GGNCC	3 cut(s)	1225, 1808, 2203
BmiI	GGNNCC	1 cut(s)	1482
BmrFI	CCNGG	4 cut(s)	35, 827, 982, 1402
BmrI	ACTGGG	1 cut(s)	2081
BmsI	GCATC	6 cut(s)	382, 766, 782, 856, 1506, 1682
BmtI	GCTAGC	1 cut(s)	1127
BmuI	ACTGGG	1 cut(s)	2081
BoxI	GACNNNNGTC	1 cut(s)	767
BpiI	GAAGAC	1 cut(s)	1764
BpmI	CTGGAG	2 cut(s)	125, 964
Bpu1102I	GCTNAGC	1 cut(s)	900
Bpu14I	TTCGAA	1 cut(s)	1450
BpuEI	CTTGAG	3 cut(s)	321, 1325, 1776
BsaAI	YACGTR	1 cut(s)	743
BsaJI	CCNNGG	7 cut(s)	34, 238, 420, 1090, 1245, 1256, 1401
BsaWI	WCCGGW	1 cut(s)	1661
BsaXI	ACNNNNNCTCC	2 cut(s)	7, 37
Bsc4I	CCNNNNNNNGG	5 cut(s)	365, 612, 987, 1222, 2057
Bse118I	RCCGGY	1 cut(s)	1950
Bse1I	ACTGG	2 cut(s)	1216, 2087
Bse3DI	GCAATG	4 cut(s)	169, 226, 582, 2127
BseAI	TCCGGA	1 cut(s)	1661
BseBI	CCWGG	4 cut(s)	35, 827, 982, 1402
BseDI	CCNNGG	7 cut(s)	34, 238, 420, 1090, 1245, 1256, 1401
BseGI	GGATG	9 cut(s)	115, 304, 625, 696, 781, 797, 1570, 1697, 2148
BseLI	CCNNNNNNNGG	5 cut(s)	365, 612, 987, 1222, 2057
BseMI	GCAATG	4 cut(s)	169, 226, 582, 2127
BseMII	CTCAG	4 cut(s)	680, 914, 1847, 2165
BseNI	ACTGG	2 cut(s)	1216, 2087
BseXI	GCAGC	5 cut(s)	979, 1054, 1720, 1910, 1932
BsgI	GTGCAG	2 cut(s)	510, 1939
Bsh1236I	CGCG	1 cut(s)	2017
Bsh1285I	CGRYCG	1 cut(s)	30
BshFI	GGCC	3 cut(s)	1188, 1226, 1400
BsiEI	CGRYCG	1 cut(s)	30
BsiHKAI	GWGCWC	2 cut(s)	498, 667
BsiSI	CCGG	2 cut(s)	1662, 1951
BsiWI	CGTACG	1 cut(s)	743
BslI	CCNNNNNNNGG	5 cut(s)	365, 612, 987, 1222, 2057
BsmAI	GTCTC	2 cut(s)	1127, 2183
BsmI	GAATGC	1 cut(s)	2180
BsnI	GGCC	3 cut(s)	1188, 1226, 1400
Bsp119I	TTCGAA	1 cut(s)	1450
Bsp1286I	GDGCHC	4 cut(s)	498, 667, 901, 1264
Bsp13I	TCCGGA	1 cut(s)	1661
Bsp1407I	TGTACA	2 cut(s)	879, 2227
Bsp1720I	GCTNAGC	1 cut(s)	900
Bsp19I	CCATGG	1 cut(s)	1090
BspACI	CCGC	5 cut(s)	356, 1189, 1574, 1895, 2038
BspANI	GGCC	3 cut(s)	1188, 1226, 1400
BspCNI	CTCAG	4 cut(s)	679, 913, 1848, 2164
BspEI	TCCGGA	1 cut(s)	1661
BspFNI	CGCG	1 cut(s)	2017
BspLI	GGNNCC	1 cut(s)	1482
BspOI	GCTAGC	1 cut(s)	1127
BspPI	GGATC	5 cut(s)	340, 647, 905, 1443, 2163
BspQI	GCTCTTC	1 cut(s)	2110
BspT104I	TTCGAA	1 cut(s)	1450
BsrDI	GCAATG	4 cut(s)	169, 226, 582, 2127
BsrFI	RCCGGY	1 cut(s)	1950
BsrGI	TGTACA	2 cut(s)	879, 2227
BsrI	ACTGG	2 cut(s)	1216, 2087
BssAI	RCCGGY	1 cut(s)	1950
BssECI	CCNNGG	7 cut(s)	34, 238, 420, 1090, 1245, 1256, 1401
BssT1I	CCWWGG	4 cut(s)	238, 420, 1090, 1256
Bst2UI	CCWGG	4 cut(s)	35, 827, 982, 1402
Bst4CI	ACNGT	8 cut(s)	92, 509, 542, 1001, 1363, 1535, 1998, 2232
Bst6I	CTCTTC	2 cut(s)	1584, 2110
BstAPI	GCANNNNNTGC	1 cut(s)	1291
BstAUI	TGTACA	2 cut(s)	879, 2227
BstBAI	YACGTR	1 cut(s)	743
BstBI	TTCGAA	1 cut(s)	1450
BstC8I	GCNNGC	5 cut(s)	140, 1125, 1952, 1956, 2178
BstDEI	CTNAG	6 cut(s)	666, 900, 1598, 1716, 1856, 2151
BstDSI	CCRYGG	1 cut(s)	1090
BstF5I	GGATG	9 cut(s)	115, 304, 625, 696, 781, 797, 1570, 1697, 2148
BstFNI	CGCG	1 cut(s)	2017
BstMAI	GTCTC	2 cut(s)	1127, 2183
BstMCI	CGRYCG	1 cut(s)	30
BstMWI	GCNNNNNNNGC	2 cut(s)	1291, 1947
BstNI	CCWGG	4 cut(s)	35, 827, 982, 1402
BstNSI	RCATGY	5 cut(s)	1038, 1179, 1289, 1958, 2228
BstPAI	GACNNNNGTC	1 cut(s)	767
BstSCI	CCNGG	4 cut(s)	33, 825, 980, 1400
BstSFI	CTRYAG	1 cut(s)	1239
BstSNI	TACGTA	1 cut(s)	743
BstUI	CGCG	1 cut(s)	2017
BstV1I	GCAGC	5 cut(s)	979, 1054, 1720, 1910, 1932
BstV2I	GAAGAC	1 cut(s)	1764
BstX2I	RGATCY	1 cut(s)	332
BstXI	CCANNNNNNTGG	1 cut(s)	2094
BstYI	RGATCY	1 cut(s)	332
BsuI	GTATCC	1 cut(s)	1976
BsuRI	GGCC	3 cut(s)	1188, 1226, 1400
BtgI	CCRYGG	1 cut(s)	1090
BtgZI	GCGATG	3 cut(s)	24, 1489, 2032
BtrI	CACGTC	1 cut(s)	1015
BtsCI	GGATG	9 cut(s)	115, 304, 625, 696, 781, 797, 1570, 1697, 2148
BtsI	GCAGTG	1 cut(s)	498
BtsIMutI	CAGTG	5 cut(s)	97, 498, 1015, 1223, 2099
Cac8I	GCNNGC	5 cut(s)	140, 1125, 1952, 1956, 2178
Cfr10I	RCCGGY	1 cut(s)	1950
Cfr13I	GGNCC	3 cut(s)	1225, 1808, 2203
CseI	GACGC	2 cut(s)	1619, 2023
CsiI	ACCWGGT	1 cut(s)	825
Csp6I	GTAC	5 cut(s)	740, 744, 880, 1356, 2228
CviQI	GTAC	5 cut(s)	740, 744, 880, 1356, 2228
DdeI	CTNAG	6 cut(s)	666, 900, 1598, 1716, 1856, 2151
DraI	TTTAAA	2 cut(s)	520, 1935
DriI	GACNNNNNGTC	1 cut(s)	982
EaeI	YGGCCR	1 cut(s)	1186
Eam1104I	CTCTTC	2 cut(s)	1584, 2110
Eam1105I	GACNNNNNGTC	1 cut(s)	982
EarI	CTCTTC	2 cut(s)	1584, 2110
Ecl136II	GAGCTC	1 cut(s)	665
Eco105I	TACGTA	1 cut(s)	743
Eco130I	CCWWGG	4 cut(s)	238, 420, 1090, 1256
Eco24I	GRGCYC	3 cut(s)	667, 901, 1264
Eco32I	GATATC	2 cut(s)	247, 2077
Eco47I	GGWCC	2 cut(s)	1808, 2203
Eco53kI	GAGCTC	1 cut(s)	665
EcoICRI	GAGCTC	1 cut(s)	665
EcoO109I	RGGNCCY	1 cut(s)	1225
EcoRII	CCWGG	4 cut(s)	33, 825, 980, 1400
EcoRV	GATATC	2 cut(s)	247, 2077
EcoT14I	CCWWGG	4 cut(s)	238, 420, 1090, 1256
EcoT38I	GRGCYC	3 cut(s)	667, 901, 1264
ErhI	CCWWGG	4 cut(s)	238, 420, 1090, 1256
FalI	AAGNNNNNCTT	4 cut(s)	615, 647, 1581, 1613
FauI	CCCGC	2 cut(s)	363, 1888
FauNDI	CATATG	1 cut(s)	954
FbaI	TGATCA	4 cut(s)	196, 319, 1827, 2101
FblI	GTMKAC	1 cut(s)	1541
Fnu4HI	GCNGC	6 cut(s)	993, 1068, 1189, 1709, 1921, 1924
FokI	GGATG	9 cut(s)	122, 311, 632, 703, 788, 804, 1557, 1704, 2155
FriOI	GRGCYC	3 cut(s)	667, 901, 1264
Fsp4HI	GCNGC	6 cut(s)	993, 1068, 1189, 1709, 1921, 1924
FspBI	CTAG	4 cut(s)	870, 987, 1124, 1257
GluI	GCNGC	6 cut(s)	993, 1068, 1189, 1709, 1921, 1924
GsuI	CTGGAG	2 cut(s)	125, 964
HaeIII	GGCC	3 cut(s)	1188, 1226, 1400
HapII	CCGG	2 cut(s)	1662, 1951
HgaI	GACGC	2 cut(s)	1619, 2023
HincII	GTYRAC	2 cut(s)	723, 1542
HindII	GTYRAC	2 cut(s)	723, 1542
HpaII	CCGG	2 cut(s)	1662, 1951
HphI	GGTGA	5 cut(s)	58, 254, 457, 1079, 1547
Hpy166II	GTNNAC	3 cut(s)	723, 1542, 1798
Hpy188I	TCNGA	8 cut(s)	27, 669, 762, 915, 939, 1742, 1857, 2196
Hpy8I	GTNNAC	3 cut(s)	723, 1542, 1798
Hpy99I	CGWCG	1 cut(s)	1546
HpyAV	CCTTC	6 cut(s)	71, 152, 266, 941, 1835, 2132
HpyCH4III	ACNGT	8 cut(s)	92, 509, 542, 1001, 1363, 1535, 1998, 2232
HpyCH4IV	ACGT	5 cut(s)	308, 466, 742, 1014, 1837
HpyCH4V	TGCA	9 cut(s)	491, 504, 995, 1070, 1221, 1231, 1294, 1920, 2125
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1291, 1947
HpyF3I	CTNAG	6 cut(s)	666, 900, 1598, 1716, 1856, 2151
HpySE526I	ACGT	5 cut(s)	308, 466, 742, 1014, 1837
Kpn2I	TCCGGA	1 cut(s)	1661
KroI	GCCGGC	1 cut(s)	1950
KroNI	GCCGGC	1 cut(s)	1952
Ksp22I	TGATCA	4 cut(s)	196, 319, 1827, 2101
LguI	GCTCTTC	1 cut(s)	2110
LmnI	GCTCC	1 cut(s)	1316
Lsp1109I	GCAGC	5 cut(s)	979, 1054, 1720, 1910, 1932
LweI	GCATC	6 cut(s)	382, 766, 782, 856, 1506, 1682
MabI	ACCWGGT	1 cut(s)	825
MaeI	CTAG	4 cut(s)	870, 987, 1124, 1257
MaeII	ACGT	5 cut(s)	308, 466, 742, 1014, 1837
MaeIII	GTNAC	4 cut(s)	467, 1010, 1680, 1816
MfeI	CAATTG	2 cut(s)	143, 1812
MflI	RGATCY	1 cut(s)	332
MhlI	GDGCHC	4 cut(s)	498, 667, 901, 1264
MlyI	GAGTC	7 cut(s)	728, 971, 1364, 1547, 1667, 1712, 2185
MmeI	TCCRAC	1 cut(s)	828
MroI	TCCGGA	1 cut(s)	1661
MroNI	GCCGGC	1 cut(s)	1950
MroXI	GAANNNNTTC	1 cut(s)	920
MseI	TTAA	8 cut(s)	311, 519, 528, 1416, 1431, 1929, 1934, 2034
MslI	CAYNNNNRTG	4 cut(s)	231, 443, 1150, 1803
MspA1I	CMGCKG	2 cut(s)	1345, 1923
MspI	CCGG	2 cut(s)	1662, 1951
MspR9I	CCNGG	4 cut(s)	35, 827, 982, 1402
MunI	CAATTG	2 cut(s)	143, 1812
Mva1269I	GAATGC	1 cut(s)	2180
MvaI	CCWGG	4 cut(s)	35, 827, 982, 1402
MvnI	CGCG	1 cut(s)	2017
MwoI	GCNNNNNNNGC	2 cut(s)	1291, 1947
NaeI	GCCGGC	1 cut(s)	1952
NcoI	CCATGG	1 cut(s)	1090
NdeI	CATATG	1 cut(s)	954
NgoMIV	GCCGGC	1 cut(s)	1950
NheI	GCTAGC	1 cut(s)	1123
NlaIV	GGNNCC	1 cut(s)	1482
NmeAIII	GCCGAG	1 cut(s)	1270
NmuCI	GTSAC	1 cut(s)	1010
NspI	RCATGY	5 cut(s)	1038, 1179, 1289, 1958, 2228
NspV	TTCGAA	1 cut(s)	1450
PaeI	GCATGC	1 cut(s)	1958
PciI	ACATGT	2 cut(s)	1034, 1175
PciSI	GCTCTTC	1 cut(s)	2110
PcsI	WCGNNNNNNNCGW	1 cut(s)	841
PctI	GAATGC	1 cut(s)	2180
PdiI	GCCGGC	1 cut(s)	1952
PdmI	GAANNNNTTC	1 cut(s)	920
PfeI	GAWTC	4 cut(s)	380, 599, 1057, 1422
Pfl23II	CGTACG	1 cut(s)	743
PflMI	CCANNNNNTGG	1 cut(s)	2057
PkrI	GCNGC	6 cut(s)	994, 1069, 1190, 1710, 1922, 1925
Ple19I	CGATCG	1 cut(s)	30
PleI	GAGTC	7 cut(s)	727, 971, 1364, 1546, 1666, 1711, 2185
PpsI	GAGTC	7 cut(s)	727, 971, 1364, 1546, 1666, 1711, 2185
Ppu21I	YACGTR	1 cut(s)	743
PscI	ACATGT	2 cut(s)	1034, 1175
PshAI	GACNNNNGTC	1 cut(s)	767
PsiI	TTATAA	1 cut(s)	408
Psp124BI	GAGCTC	1 cut(s)	667
Psp1406I	AACGTT	1 cut(s)	308
Psp6I	CCWGG	4 cut(s)	33, 825, 980, 1400
PspGI	CCWGG	4 cut(s)	33, 825, 980, 1400
PspLI	CGTACG	1 cut(s)	743
PspN4I	GGNNCC	1 cut(s)	1482
PspPI	GGNCC	3 cut(s)	1225, 1808, 2203
PsuI	RGATCY	1 cut(s)	332
PvuI	CGATCG	1 cut(s)	30
PvuII	CAGCTG	2 cut(s)	1345, 1923
RsaI	GTAC	5 cut(s)	741, 745, 881, 1357, 2229
RsaNI	GTAC	5 cut(s)	740, 744, 880, 1356, 2228
RseI	CAYNNNNRTG	4 cut(s)	231, 443, 1150, 1803
SacI	GAGCTC	1 cut(s)	667
SalI	GTCGAC	1 cut(s)	1540
SapI	GCTCTTC	1 cut(s)	2110
SaqAI	TTAA	8 cut(s)	311, 519, 528, 1416, 1431, 1929, 1934, 2034
SatI	GCNGC	6 cut(s)	993, 1068, 1189, 1709, 1921, 1924
Sau96I	GGNCC	3 cut(s)	1225, 1808, 2203
SchI	GAGTC	7 cut(s)	728, 971, 1364, 1547, 1667, 1712, 2185
ScrFI	CCNGG	4 cut(s)	35, 827, 982, 1402
SduI	GDGCHC	4 cut(s)	498, 667, 901, 1264
SexAI	ACCWGGT	1 cut(s)	825
SfaNI	GCATC	6 cut(s)	382, 766, 782, 856, 1506, 1682
SfcI	CTRYAG	1 cut(s)	1239
SfuI	TTCGAA	1 cut(s)	1450
SinI	GGWCC	2 cut(s)	1808, 2203
SmiI	ATTTAAAT	1 cut(s)	1935
SmiMI	CAYNNNNRTG	4 cut(s)	231, 443, 1150, 1803
SmlI	CTYRAG	3 cut(s)	336, 1304, 1791
SmoI	CTYRAG	3 cut(s)	336, 1304, 1791
SnaBI	TACGTA	1 cut(s)	743
SphI	GCATGC	1 cut(s)	1958
SsiI	CCGC	5 cut(s)	356, 1189, 1574, 1895, 2038
SspMI	CTAG	4 cut(s)	870, 987, 1124, 1257
SstI	GAGCTC	1 cut(s)	667
StyD4I	CCNGG	4 cut(s)	33, 825, 980, 1400
StyI	CCWWGG	4 cut(s)	238, 420, 1090, 1256
SwaI	ATTTAAAT	1 cut(s)	1935
TaaI	ACNGT	8 cut(s)	92, 509, 542, 1001, 1363, 1535, 1998, 2232
TaiI	ACGT	5 cut(s)	311, 469, 745, 1017, 1840
TaqI	TCGA	4 cut(s)	651, 1450, 1468, 1541
TatI	WGTACW	2 cut(s)	879, 2227
TauI	GCSGC	1 cut(s)	1191
TfiI	GAWTC	4 cut(s)	380, 599, 1057, 1422
Tru1I	TTAA	8 cut(s)	311, 519, 528, 1416, 1431, 1929, 1934, 2034
Tru9I	TTAA	8 cut(s)	311, 519, 528, 1416, 1431, 1929, 1934, 2034
TscAI	CASTG	5 cut(s)	97, 498, 1015, 1223, 2099
TseFI	GTSAC	1 cut(s)	1010
TseI	GCWGC	5 cut(s)	992, 1067, 1708, 1920, 1923
Tsp45I	GTSAC	1 cut(s)	1010
TspDTI	ATGAA	9 cut(s)	17, 126, 267, 300, 372, 444, 636, 960, 1011
TspGWI	ACGGA	1 cut(s)	2195
TspRI	CASTG	5 cut(s)	97, 498, 1015, 1223, 2099
Van91I	CCANNNNNTGG	1 cut(s)	2057
VpaK11BI	GGWCC	2 cut(s)	1808, 2203
XapI	RAATTY	3 cut(s)	916, 1851, 1905
XceI	RCATGY	5 cut(s)	1038, 1179, 1289, 1958, 2228
XcmI	CCANNNNNNNNNTGG	1 cut(s)	613
XmaJI	CCTAGG	1 cut(s)	1256
XmiI	GTMKAC	1 cut(s)	1541
XmnI	GAANNNNTTC	1 cut(s)	920
XspI	CTAG	4 cut(s)	870, 987, 1124, 1257

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.