meprin and TRAF homology
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25320 AT2G25320 AT2G25320 |
| fragaria_vesca | FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 |
| malus_domestica | MD08G1156500.v1.1 MD15G1127100.v1.1 |
| prunus_persica | Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1 |
| pyrus_communis | pycom08g12870 pycom15g11460 |
| rosa_chinensis | RchiOBHm_Chr6g0297611 |
| rosa_laevigata | RLG00000011577 |
| rosa_multiflora | Rmu_ssc0000319.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00170320 |
| rosa_rugosa | Rorug06G0274300 Rorug06G0274400.1 Rorug06G0274500 Rorug06G0274600 |
| rosa_samantha | Rh6AG385100 Rh6BG393200 Rh6CG399000 Rh6DG385600 |
| rosa_wichuraiana | Rw6G033550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1685 |
| AbsI | CCTCGAGG | 1 cut(s) | 4769 |
| Acc36I | ACCTGC | 1 cut(s) | 2292 |
| AccB1I | GGYRCC | 7 cut(s) | 154, 410, 2375, 3076, 3680, 3720, 4137 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 397, 1467, 1513 |
| AccBSI | CCGCTC | 1 cut(s) | 4378 |
| AccI | GTMKAC | 3 cut(s) | 2809, 2998, 3914 |
| AccII | CGCG | 4 cut(s) | 470, 495, 658, 1754 |
| AclWI | GGATC | 9 cut(s) | 395, 408, 1308, 2207, 4365, 4434, 4885, 5038, 5051 |
| AcoI | YGGCCR | 3 cut(s) | 2903, 3702, 5001 |
| AcyI | GRCGYC | 4 cut(s) | 155, 1682, 2376, 3721 |
| AfaI | GTAC | 7 cut(s) | 233, 302, 374, 1156, 2026, 3030, 4635 |
| AfeI | AGCGCT | 2 cut(s) | 2438, 4537 |
| AflII | CTTAAG | 1 cut(s) | 4271 |
| AgeI | ACCGGT | 1 cut(s) | 733 |
| AhlI | ACTAGT | 1 cut(s) | 1601 |
| AjiI | CACGTC | 1 cut(s) | 102 |
| AjnI | CCWGG | 4 cut(s) | 179, 2812, 2827, 5081 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1496, 1528 |
| AleI | CACNNNNGTG | 1 cut(s) | 77 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1538, 1570, 2526, 2558 |
| Alw21I | GWGCWC | 7 cut(s) | 26, 878, 2226, 2925, 2956, 3096, 3187 |
| AlwI | GGATC | 9 cut(s) | 395, 408, 1308, 2207, 4365, 4434, 4885, 5038, 5051 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1467, 2216, 2711, 3158, 3785 |
| Ama87I | CYCGRG | 8 cut(s) | 268, 405, 514, 1115, 1392, 3242, 4599, 4769 |
| Aor51HI | AGCGCT | 2 cut(s) | 2438, 4537 |
| AoxI | GGCC | 6 cut(s) | 2903, 3702, 3850, 3867, 4743, 5001 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2630, 2662 |
| AsiGI | ACCGGT | 1 cut(s) | 733 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 3135, 3546, 4167 |
| AspLEI | GCGC | 6 cut(s) | 157, 199, 2378, 2439, 3723, 4538 |
| AspS9I | GGNCC | 9 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 3868, 5078 |
| AsuC2I | CCSGG | 5 cut(s) | 369, 827, 999, 2863, 4798 |
| AsuHPI | GGTGA | 8 cut(s) | 362, 892, 1966, 2297, 2633, 3533, 4051, 4510 |
| AsuII | TTCGAA | 4 cut(s) | 575, 973, 1193, 1864 |
| AsuNHI | GCTAGC | 1 cut(s) | 451 |
| AvaI | CYCGRG | 8 cut(s) | 268, 405, 514, 1115, 1392, 3242, 4599, 4769 |
| AvaII | GGWCC | 8 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 5078 |
| AxyI | CCTNAGG | 1 cut(s) | 345 |
| BaeGI | GKGCMC | 2 cut(s) | 289, 413 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 1131, 1164, 2100, 2133, 2733, 2766 |
| BalI | TGGCCA | 2 cut(s) | 2905, 3704 |
| BamHI | GGATCC | 2 cut(s) | 400, 5043 |
| BanI | GGYRCC | 7 cut(s) | 154, 410, 2375, 3076, 3680, 3720, 4137 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1753, 1785 |
| BauI | CACGAG | 3 cut(s) | 3675, 4308, 4940 |
| BbsI | GAAGAC | 3 cut(s) | 2007, 2036, 4424 |
| Bbv12I | GWGCWC | 7 cut(s) | 26, 878, 2226, 2925, 2956, 3096, 3187 |
| BceAI | ACGGC | 4 cut(s) | 155, 3993, 4652, 4988 |
| BciT130I | CCWGG | 4 cut(s) | 181, 2814, 2829, 5083 |
| BciVI | GTATCC | 3 cut(s) | 311, 1705, 2734 |
| BclI | TGATCA | 2 cut(s) | 1612, 1705 |
| BcnI | CCSGG | 5 cut(s) | 369, 827, 999, 2863, 4798 |
| BcuI | ACTAGT | 1 cut(s) | 1601 |
| BfmI | CTRYAG | 7 cut(s) | 2546, 2601, 2703, 3285, 3669, 3786, 4404 |
| BfoI | RGCGCY | 5 cut(s) | 158, 2379, 2440, 3724, 4539 |
| BfrI | CTTAAG | 1 cut(s) | 4271 |
| BfuAI | ACCTGC | 1 cut(s) | 2292 |
| BfuI | GTATCC | 3 cut(s) | 311, 1705, 2734 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3689 |
| BglII | AGATCT | 2 cut(s) | 3341, 3880 |
| BmcAI | AGTACT | 2 cut(s) | 233, 302 |
| Bme1390I | CCNGG | 9 cut(s) | 181, 369, 827, 999, 2814, 2829, 2863, 4798, 5083 |
| Bme18I | GGWCC | 8 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 5078 |
| BmeT110I | CYCGRG | 8 cut(s) | 268, 405, 514, 1115, 1392, 3242, 4599, 4769 |
| BmgBI | CACGTC | 1 cut(s) | 102 |
| BmgT120I | GGNCC | 9 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 3868, 5078 |
| BmrFI | CCNGG | 9 cut(s) | 181, 369, 827, 999, 2814, 2829, 2863, 4798, 5083 |
| BmrI | ACTGGG | 1 cut(s) | 3307 |
| BmtI | GCTAGC | 1 cut(s) | 455 |
| BmuI | ACTGGG | 1 cut(s) | 3307 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2142, 3004 |
| BpiI | GAAGAC | 3 cut(s) | 2007, 2036, 4424 |
| BpmI | CTGGAG | 3 cut(s) | 861, 1489, 2634 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3045, 4883 |
| Bpu14I | TTCGAA | 4 cut(s) | 575, 973, 1193, 1864 |
| BpuEI | CTTGAG | 2 cut(s) | 4379, 4643 |
| BpuMI | CCSGG | 5 cut(s) | 369, 827, 999, 2863, 4798 |
| Bsa29I | ATCGAT | 2 cut(s) | 4369, 4719 |
| BsaAI | YACGTR | 2 cut(s) | 79, 1773 |
| BsaHI | GRCGYC | 4 cut(s) | 155, 1682, 2376, 3721 |
| BsaI | GGTCTC | 1 cut(s) | 1808 |
| BsaWI | WCCGGW | 2 cut(s) | 713, 733 |
| Bse118I | RCCGGY | 4 cut(s) | 145, 327, 447, 733 |
| Bse21I | CCTNAGG | 1 cut(s) | 345 |
| Bse3DI | GCAATG | 4 cut(s) | 2379, 3161, 3494, 5059 |
| BseBI | CCWGG | 4 cut(s) | 181, 2814, 2829, 5083 |
| BseCI | ATCGAT | 2 cut(s) | 4369, 4719 |
| BseMI | GCAATG | 4 cut(s) | 2379, 3161, 3494, 5059 |
| BseRI | GAGGAG | 4 cut(s) | 1234, 1532, 4070, 4797 |
| BseSI | GKGCMC | 2 cut(s) | 289, 413 |
| BseYI | CCCAGC | 2 cut(s) | 1847, 3423 |
| BsgI | GTGCAG | 1 cut(s) | 2994 |
| Bsh1236I | CGCG | 4 cut(s) | 470, 495, 658, 1754 |
| Bsh1285I | CGRYCG | 1 cut(s) | 220 |
| BshFI | GGCC | 6 cut(s) | 2905, 3704, 3852, 3869, 4745, 5003 |
| BshNI | GGYRCC | 7 cut(s) | 154, 410, 2375, 3076, 3680, 3720, 4137 |
| BshTI | ACCGGT | 1 cut(s) | 733 |
| BshVI | ATCGAT | 2 cut(s) | 4369, 4719 |
| BsiEI | CGRYCG | 1 cut(s) | 220 |
| BsiHKAI | GWGCWC | 7 cut(s) | 26, 878, 2226, 2925, 2956, 3096, 3187 |
| BsiHKCI | CYCGRG | 8 cut(s) | 268, 405, 514, 1115, 1392, 3242, 4599, 4769 |
| BslFI | GGGAC | 9 cut(s) | 443, 1034, 1382, 2815, 3842, 4394, 4453, 4671, 4780 |
| BsmBI | CGTCTC | 2 cut(s) | 1673, 4847 |
| BsmFI | GGGAC | 9 cut(s) | 443, 1034, 1382, 2815, 3842, 4394, 4453, 4671, 4780 |
| BsmI | GAATGC | 3 cut(s) | 3499, 3966, 4866 |
| BsnI | GGCC | 6 cut(s) | 2905, 3704, 3852, 3869, 4745, 5003 |
| Bso31I | GGTCTC | 1 cut(s) | 1808 |
| BsoBI | CYCGRG | 8 cut(s) | 268, 405, 514, 1115, 1392, 3242, 4599, 4769 |
| Bsp119I | TTCGAA | 4 cut(s) | 575, 973, 1193, 1864 |
| Bsp19I | CCATGG | 1 cut(s) | 3705 |
| Bsp68I | TCGCGA | 1 cut(s) | 495 |
| BspANI | GGCC | 6 cut(s) | 2905, 3704, 3852, 3869, 4745, 5003 |
| BspDI | ATCGAT | 2 cut(s) | 4369, 4719 |
| BspFNI | CGCG | 4 cut(s) | 470, 495, 658, 1754 |
| BspHI | TCATGA | 3 cut(s) | 2058, 4435, 4870 |
| BspMAI | CTGCAG | 2 cut(s) | 2550, 2707 |
| BspMI | ACCTGC | 1 cut(s) | 2292 |
| BspOI | GCTAGC | 1 cut(s) | 455 |
| BspPI | GGATC | 9 cut(s) | 395, 408, 1308, 2207, 4365, 4434, 4885, 5038, 5051 |
| BspQI | GCTCTTC | 3 cut(s) | 2913, 4526, 4683 |
| BspT104I | TTCGAA | 4 cut(s) | 575, 973, 1193, 1864 |
| BspT107I | GGYRCC | 7 cut(s) | 154, 410, 2375, 3076, 3680, 3720, 4137 |
| BspTI | CTTAAG | 1 cut(s) | 4271 |
| BspTNI | GGTCTC | 1 cut(s) | 1808 |
| BsrBI | CCGCTC | 1 cut(s) | 4378 |
| BsrDI | GCAATG | 4 cut(s) | 2379, 3161, 3494, 5059 |
| BsrFI | RCCGGY | 4 cut(s) | 145, 327, 447, 733 |
| BssAI | RCCGGY | 4 cut(s) | 145, 327, 447, 733 |
| BssNAI | GTATAC | 2 cut(s) | 2810, 3915 |
| BssNI | GRCGYC | 4 cut(s) | 155, 1682, 2376, 3721 |
| BssSI | CACGAG | 3 cut(s) | 3675, 4308, 4940 |
| BssT1I | CCWWGG | 2 cut(s) | 2147, 3705 |
| Bst1107I | GTATAC | 2 cut(s) | 2810, 3915 |
| Bst2BI | CACGAG | 3 cut(s) | 3675, 4308, 4940 |
| Bst2UI | CCWGG | 4 cut(s) | 181, 2814, 2829, 5083 |
| Bst6I | CTCTTC | 6 cut(s) | 562, 1307, 2889, 2913, 4526, 4683 |
| BstACI | GRCGYC | 4 cut(s) | 155, 1682, 2376, 3721 |
| BstAFI | CTTAAG | 1 cut(s) | 4271 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 364, 3158, 4199 |
| BstBAI | YACGTR | 2 cut(s) | 79, 1773 |
| BstBI | TTCGAA | 4 cut(s) | 575, 973, 1193, 1864 |
| BstDSI | CCRYGG | 2 cut(s) | 171, 3705 |
| BstFNI | CGCG | 4 cut(s) | 470, 495, 658, 1754 |
| BstH2I | RGCGCY | 5 cut(s) | 158, 2379, 2440, 3724, 4539 |
| BstHHI | GCGC | 6 cut(s) | 157, 199, 2378, 2439, 3723, 4538 |
| BstMCI | CGRYCG | 1 cut(s) | 220 |
| BstNI | CCWGG | 4 cut(s) | 181, 2814, 2829, 5083 |
| BstNSI | RCATGY | 4 cut(s) | 1015, 4177, 4805, 5063 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2142, 3004 |
| BstSCI | CCNGG | 9 cut(s) | 179, 367, 825, 997, 2812, 2827, 2861, 4796, 5081 |
| BstSFI | CTRYAG | 7 cut(s) | 2546, 2601, 2703, 3285, 3669, 3786, 4404 |
| BstSLI | GKGCMC | 2 cut(s) | 289, 413 |
| BstUI | CGCG | 4 cut(s) | 470, 495, 658, 1754 |
| BstV2I | GAAGAC | 3 cut(s) | 2007, 2036, 4424 |
| BstX2I | RGATCY | 7 cut(s) | 400, 1300, 2212, 3341, 3880, 4890, 5043 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 79, 1925, 5054 |
| BstYI | RGATCY | 7 cut(s) | 400, 1300, 2212, 3341, 3880, 4890, 5043 |
| BstZ17I | GTATAC | 2 cut(s) | 2810, 3915 |
| Bsu15I | ATCGAT | 2 cut(s) | 4369, 4719 |
| Bsu36I | CCTNAGG | 1 cut(s) | 345 |
| BsuI | GTATCC | 3 cut(s) | 311, 1705, 2734 |
| BsuRI | GGCC | 6 cut(s) | 2905, 3704, 3852, 3869, 4745, 5003 |
| BsuTUI | ATCGAT | 2 cut(s) | 4369, 4719 |
| BtgI | CCRYGG | 2 cut(s) | 171, 3705 |
| BtgZI | GCGATG | 2 cut(s) | 476, 2274 |
| BtrI | CACGTC | 1 cut(s) | 102 |
| BtsI | GCAGTG | 3 cut(s) | 1152, 2476, 3214 |
| BtuMI | TCGCGA | 1 cut(s) | 495 |
| BveI | ACCTGC | 1 cut(s) | 2292 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1467, 2216, 2711, 3158, 3785 |
| CciI | TCATGA | 3 cut(s) | 2058, 4435, 4870 |
| CfoI | GCGC | 6 cut(s) | 157, 199, 2378, 2439, 3723, 4538 |
| Cfr10I | RCCGGY | 4 cut(s) | 145, 327, 447, 733 |
| Cfr13I | GGNCC | 9 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 3868, 5078 |
| ClaI | ATCGAT | 2 cut(s) | 4369, 4719 |
| CpoI | CGGWCCG | 1 cut(s) | 731 |
| CseI | GACGC | 2 cut(s) | 2378, 4864 |
| Csp6I | GTAC | 7 cut(s) | 232, 301, 373, 1155, 2025, 3029, 4634 |
| CspAI | ACCGGT | 1 cut(s) | 733 |
| CspI | CGGWCCG | 1 cut(s) | 731 |
| CviQI | GTAC | 7 cut(s) | 232, 301, 373, 1155, 2025, 3029, 4634 |
| DinI | GGCGCC | 3 cut(s) | 156, 2377, 3722 |
| DraI | TTTAAA | 3 cut(s) | 1308, 3301, 3928 |
| EaeI | YGGCCR | 3 cut(s) | 2903, 3702, 5001 |
| Eam1104I | CTCTTC | 6 cut(s) | 562, 1307, 2889, 2913, 4526, 4683 |
| EarI | CTCTTC | 6 cut(s) | 562, 1307, 2889, 2913, 4526, 4683 |
| Ecl136II | GAGCTC | 5 cut(s) | 24, 876, 2224, 2923, 2954 |
| Eco130I | CCWWGG | 2 cut(s) | 2147, 3705 |
| Eco147I | AGGCCT | 1 cut(s) | 4745 |
| Eco31I | GGTCTC | 1 cut(s) | 1808 |
| Eco32I | GATATC | 1 cut(s) | 2272 |
| Eco47I | GGWCC | 8 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 5078 |
| Eco47III | AGCGCT | 2 cut(s) | 2438, 4537 |
| Eco53kI | GAGCTC | 5 cut(s) | 24, 876, 2224, 2923, 2954 |
| Eco81I | CCTNAGG | 1 cut(s) | 345 |
| Eco88I | CYCGRG | 8 cut(s) | 268, 405, 514, 1115, 1392, 3242, 4599, 4769 |
| EcoICRI | GAGCTC | 5 cut(s) | 24, 876, 2224, 2923, 2954 |
| EcoO109I | RGGNCCY | 2 cut(s) | 163, 1663 |
| EcoRI | GAATTC | 1 cut(s) | 112 |
| EcoRII | CCWGG | 4 cut(s) | 179, 2812, 2827, 5081 |
| EcoRV | GATATC | 1 cut(s) | 2272 |
| EcoT14I | CCWWGG | 2 cut(s) | 2147, 3705 |
| EcoT22I | ATGCAT | 3 cut(s) | 1017, 1901, 2203 |
| EgeI | GGCGCC | 3 cut(s) | 156, 2377, 3722 |
| EheI | GGCGCC | 3 cut(s) | 156, 2377, 3722 |
| ErhI | CCWWGG | 2 cut(s) | 2147, 3705 |
| Esp3I | CGTCTC | 2 cut(s) | 1673, 4847 |
| FaqI | GGGAC | 9 cut(s) | 443, 1034, 1382, 2815, 3842, 4394, 4453, 4671, 4780 |
| FauI | CCCGC | 5 cut(s) | 103, 185, 688, 4086, 4371 |
| FauNDI | CATATG | 1 cut(s) | 2314 |
| FbaI | TGATCA | 2 cut(s) | 1612, 1705 |
| FblI | GTMKAC | 3 cut(s) | 2809, 2998, 3914 |
| GlaI | GCGC | 6 cut(s) | 156, 198, 2377, 2438, 3722, 4537 |
| GsaI | CCCAGC | 2 cut(s) | 1851, 3427 |
| GsuI | CTGGAG | 3 cut(s) | 861, 1489, 2634 |
| HaeII | RGCGCY | 5 cut(s) | 158, 2379, 2440, 3724, 4539 |
| HaeIII | GGCC | 6 cut(s) | 2905, 3704, 3852, 3869, 4745, 5003 |
| HgaI | GACGC | 2 cut(s) | 2378, 4864 |
| HhaI | GCGC | 6 cut(s) | 157, 199, 2378, 2439, 3723, 4538 |
| Hin1I | GRCGYC | 4 cut(s) | 155, 1682, 2376, 3721 |
| Hin6I | GCGC | 6 cut(s) | 155, 197, 2376, 2437, 3721, 4536 |
| HinP1I | GCGC | 6 cut(s) | 155, 197, 2376, 2437, 3721, 4536 |
| HincII | GTYRAC | 5 cut(s) | 463, 3194, 3979, 4018, 4644 |
| HindII | GTYRAC | 5 cut(s) | 463, 3194, 3979, 4018, 4644 |
| HindIII | AAGCTT | 1 cut(s) | 131 |
| HphI | GGTGA | 8 cut(s) | 362, 892, 1966, 2297, 2633, 3533, 4051, 4510 |
| HpyCH4IV | ACGT | 7 cut(s) | 78, 101, 1157, 1682, 1772, 2995, 4477 |
| HpySE526I | ACGT | 7 cut(s) | 78, 101, 1157, 1682, 1772, 2995, 4477 |
| Hsp92I | GRCGYC | 4 cut(s) | 155, 1682, 2376, 3721 |
| HspAI | GCGC | 6 cut(s) | 155, 197, 2376, 2437, 3721, 4536 |
| KasI | GGCGCC | 3 cut(s) | 154, 2375, 3720 |
| Ksp22I | TGATCA | 2 cut(s) | 1612, 1705 |
| LguI | GCTCTTC | 3 cut(s) | 2913, 4526, 4683 |
| LmnI | GCTCC | 9 cut(s) | 119, 294, 2663, 2699, 2963, 3046, 3091, 4057, 4810 |
| MaeII | ACGT | 7 cut(s) | 78, 101, 1157, 1682, 1772, 2995, 4477 |
| MbiI | CCGCTC | 1 cut(s) | 4378 |
| MfeI | CAATTG | 1 cut(s) | 1267 |
| MflI | RGATCY | 7 cut(s) | 400, 1300, 2212, 3341, 3880, 4890, 5043 |
| MlsI | TGGCCA | 2 cut(s) | 2905, 3704 |
| MluNI | TGGCCA | 2 cut(s) | 2905, 3704 |
| Mly113I | GGCGCC | 3 cut(s) | 155, 2376, 3721 |
| MmeI | TCCRAC | 9 cut(s) | 1224, 1494, 2058, 2474, 3847, 4830, 4984, 4987, 5056 |
| Mox20I | TGGCCA | 2 cut(s) | 2905, 3704 |
| Mph1103I | ATGCAT | 3 cut(s) | 1017, 1901, 2203 |
| MroXI | GAANNNNTTC | 3 cut(s) | 3135, 3546, 4167 |
| MscI | TGGCCA | 2 cut(s) | 2905, 3704 |
| MslI | CAYNNNNRTG | 7 cut(s) | 77, 1771, 2063, 3313, 4968, 5052, 5064 |
| Msp20I | TGGCCA | 2 cut(s) | 2905, 3704 |
| MspA1I | CMGCKG | 2 cut(s) | 3814, 4928 |
| MspCI | CTTAAG | 1 cut(s) | 4271 |
| MspR9I | CCNGG | 9 cut(s) | 181, 369, 827, 999, 2814, 2829, 2863, 4798, 5083 |
| MunI | CAATTG | 1 cut(s) | 1267 |
| Mva1269I | GAATGC | 3 cut(s) | 3499, 3966, 4866 |
| MvaI | CCWGG | 4 cut(s) | 181, 2814, 2829, 5083 |
| MvnI | CGCG | 4 cut(s) | 470, 495, 658, 1754 |
| NarI | GGCGCC | 3 cut(s) | 155, 2376, 3721 |
| NciI | CCSGG | 5 cut(s) | 369, 827, 999, 2863, 4798 |
| NcoI | CCATGG | 1 cut(s) | 3705 |
| NdeI | CATATG | 1 cut(s) | 2314 |
| NheI | GCTAGC | 1 cut(s) | 451 |
| NruI | TCGCGA | 1 cut(s) | 495 |
| NsiI | ATGCAT | 3 cut(s) | 1017, 1901, 2203 |
| NspI | RCATGY | 4 cut(s) | 1015, 4177, 4805, 5063 |
| NspV | TTCGAA | 4 cut(s) | 575, 973, 1193, 1864 |
| OliI | CACNNNNGTG | 1 cut(s) | 77 |
| PaeI | GCATGC | 2 cut(s) | 4177, 4805 |
| PaeR7I | CTCGAG | 4 cut(s) | 514, 1115, 3242, 4769 |
| PagI | TCATGA | 3 cut(s) | 2058, 4435, 4870 |
| PceI | AGGCCT | 1 cut(s) | 4745 |
| PciSI | GCTCTTC | 3 cut(s) | 2913, 4526, 4683 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 53, 56, 107, 540 |
| PctI | GAATGC | 3 cut(s) | 3499, 3966, 4866 |
| PdmI | GAANNNNTTC | 3 cut(s) | 3135, 3546, 4167 |
| PflFI | GACNNNGTC | 1 cut(s) | 4858 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 397, 1467, 1513 |
| PinAI | ACCGGT | 1 cut(s) | 733 |
| Ple19I | CGATCG | 1 cut(s) | 220 |
| PluTI | GGCGCC | 3 cut(s) | 158, 2379, 3724 |
| Ppu21I | YACGTR | 2 cut(s) | 79, 1773 |
| PpuMI | RGGWCCY | 2 cut(s) | 163, 1663 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2142, 3004 |
| Psp124BI | GAGCTC | 5 cut(s) | 26, 878, 2226, 2925, 2956 |
| Psp5II | RGGWCCY | 2 cut(s) | 163, 1663 |
| Psp6I | CCWGG | 4 cut(s) | 179, 2812, 2827, 5081 |
| PspFI | CCCAGC | 2 cut(s) | 1847, 3423 |
| PspGI | CCWGG | 4 cut(s) | 179, 2812, 2827, 5081 |
| PspPI | GGNCC | 9 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 3868, 5078 |
| PspPPI | RGGWCCY | 2 cut(s) | 163, 1663 |
| PspXI | VCTCGAGB | 2 cut(s) | 1115, 4769 |
| PstI | CTGCAG | 2 cut(s) | 2550, 2707 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1467, 2216, 2711, 3158, 3785 |
| PsuI | RGATCY | 7 cut(s) | 400, 1300, 2212, 3341, 3880, 4890, 5043 |
| PsyI | GACNNNGTC | 1 cut(s) | 4858 |
| PvuI | CGATCG | 1 cut(s) | 220 |
| PvuII | CAGCTG | 2 cut(s) | 3814, 4928 |
| RruI | TCGCGA | 1 cut(s) | 495 |
| RsaI | GTAC | 7 cut(s) | 233, 302, 374, 1156, 2026, 3030, 4635 |
| RsaNI | GTAC | 7 cut(s) | 232, 301, 373, 1155, 2025, 3029, 4634 |
| RseI | CAYNNNNRTG | 7 cut(s) | 77, 1771, 2063, 3313, 4968, 5052, 5064 |
| Rsr2I | CGGWCCG | 1 cut(s) | 731 |
| RsrII | CGGWCCG | 1 cut(s) | 731 |
| SacI | GAGCTC | 5 cut(s) | 26, 878, 2226, 2925, 2956 |
| SapI | GCTCTTC | 3 cut(s) | 2913, 4526, 4683 |
| Sau96I | GGNCC | 9 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 3868, 5078 |
| ScaI | AGTACT | 2 cut(s) | 233, 302 |
| ScrFI | CCNGG | 9 cut(s) | 181, 369, 827, 999, 2814, 2829, 2863, 4798, 5083 |
| SfcI | CTRYAG | 7 cut(s) | 2546, 2601, 2703, 3285, 3669, 3786, 4404 |
| SfoI | GGCGCC | 3 cut(s) | 156, 2377, 3722 |
| Sfr274I | CTCGAG | 4 cut(s) | 514, 1115, 3242, 4769 |
| SfuI | TTCGAA | 4 cut(s) | 575, 973, 1193, 1864 |
| SinI | GGWCC | 8 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 5078 |
| SlaI | CTCGAG | 4 cut(s) | 514, 1115, 3242, 4769 |
| SmiI | ATTTAAAT | 1 cut(s) | 3928 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 77, 1771, 2063, 3313, 4968, 5052, 5064 |
| SmlI | CTYRAG | 7 cut(s) | 514, 1115, 3242, 4271, 4358, 4622, 4769 |
| SmoI | CTYRAG | 7 cut(s) | 514, 1115, 3242, 4271, 4358, 4622, 4769 |
| SpeI | ACTAGT | 1 cut(s) | 1601 |
| SphI | GCATGC | 2 cut(s) | 4177, 4805 |
| SseBI | AGGCCT | 1 cut(s) | 4745 |
| SspDI | GGCGCC | 3 cut(s) | 154, 2375, 3720 |
| SspI | AATATT | 2 cut(s) | 2133, 4594 |
| SstI | GAGCTC | 5 cut(s) | 26, 878, 2226, 2925, 2956 |
| StuI | AGGCCT | 1 cut(s) | 4745 |
| StyD4I | CCNGG | 9 cut(s) | 179, 367, 825, 997, 2812, 2827, 2861, 4796, 5081 |
| StyI | CCWWGG | 2 cut(s) | 2147, 3705 |
| SwaI | ATTTAAAT | 1 cut(s) | 3928 |
| TaiI | ACGT | 7 cut(s) | 81, 104, 1160, 1685, 1775, 2998, 4480 |
| TaqII | GACCGA | 1 cut(s) | 3996 |
| TatI | WGTACW | 3 cut(s) | 231, 300, 3028 |
| TauI | GCSGC | 3 cut(s) | 152, 155, 3274 |
| TspGWI | ACGGA | 6 cut(s) | 126, 595, 1465, 2393, 3563, 4679 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4858 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 397, 1467, 1513 |
| Vha464I | CTTAAG | 1 cut(s) | 4271 |
| VpaK11BI | GGWCC | 8 cut(s) | 82, 163, 177, 256, 731, 1663, 3530, 5078 |
| XbaI | TCTAGA | 2 cut(s) | 2291, 3875 |
| XceI | RCATGY | 4 cut(s) | 1015, 4177, 4805, 5063 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4967 |
| XhoI | CTCGAG | 4 cut(s) | 514, 1115, 3242, 4769 |
| XmiI | GTMKAC | 3 cut(s) | 2809, 2998, 3914 |
| XmnI | GAANNNNTTC | 3 cut(s) | 3135, 3546, 4167 |
| ZraI | GACGTC | 1 cut(s) | 1683 |
| ZrmI | AGTACT | 2 cut(s) | 233, 302 |
| Zsp2I | ATGCAT | 3 cut(s) | 1017, 1901, 2203 |