Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0004493

Physical Location & Seq

Genomic Coordinates Forward (+)

11446314 .. 11451415

Gene Structure 5102 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g12870.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3042 bp

ATGAAGGTGTCAGATATGTTGGAAGCAGATGCAGGGTTTCTTGTTCGTGATACTGTTGTTTTTGTCTGCGAAATATTGGACTGCTGTCCTTGGTTTGAGTTTTCAGATCTAGAGGTTTTTGCTTCGGATGATGATCAGGATGCATTAACAACAGATCCTGATGAGCTAGTTGATTCTGAAGATAGTGAAGGAGTTGGTGGTGATGAAGAAGATATCTTTAGAAACCTACTTTCTAGAGCTGGATTTCACCTCACATACGGAGATAATCCTTCACAGCCTCAGGTCACTTTACGAGAAAAGCTTCTGATGGATGCTGGTGCTATTGCTGGTTTTCTGACTGGGCTCCGTGTTTATCTTGATGACCCTGCTAAAGTAAAACGCCTGCTTCTCCCAACCAAGCTTTCTAGTAGCGGCGATGGAATGAAGGTCGTAAAGAATGATGAATCTTCCCCTACTTTGATGAATTTGCTAATGGGAGTCAAAGTTCTGCAGCAGGCTATCATTGATTTACTTCTGGACATTATGGTTGAGTGTTGCCAACCTTCAGAAGGGACTTCTAATGGTGACTTGTCTGATGCAAACTCAAAGTCTCCAGATGGAAGTGGAGCTGCTAGTCTGCTGCAATCCGATAGAGAAAATGGAGCTACAGAATCTTCGGATTGTCCTGTGTGTGAAAGATTGGATACTAGCGCTGATGAAACTAGCAGCAGCACTTCGGCTGTTCAGAGCTCTGACGTGAATGGGATTGGTGTACCTGGAAAAACTCTTCCTGGGAAACCAATTTGTCTACCAGAAACATCTGCCAGGGTGTCAGAAAATGTCACCCTTCGCTCAAAGACCAAGTGGCCTGAGCAATCAGAGGAGCTCTTAGGATTGATTGTAAACTCATTGAGAGCTCTAGATGGAGCTGTTCCACAAGGATGCCCTGAACCAAGACGTCGGCCTCAGTCTGCACAAAAGATCGATCTTGTACTGGATAAAGCGCCGAAGCATTTGCAGCCCGATCTTGTTGCTTTGGTGCCCAAGTTGGTTGAGCACTCAGAGCATCCACTTGCTGCTTTTGCACTTATAGAACGACTTCAAAAACCAGATGCAGAACCTGCTTTGCGGACACCTGTTTTTGATGCTCTTAGTCAACTGGACTGTGGCAGTGAAGTGTGGGAACGAGTTTTATCTCAATCTTTTGAGTTTTTGCCAGATTCAAATGATGAACCTCTTGCTGCAACCATAGATTTTATATTTAAAGCTGCATCCCAGTGCCAACACCTCCCTGAAGCGGTCAGATCGGTTCGTGTTAGGCTAAAGAATTTGGGTGCCGAAGTTTCTCCTTGTGTTCTTGAATTTTTGAGTAGAACTGTAAATAGCTGGGGAGATGTTGCTGAAACTATACTTAGAGATATTGATTGTGATGATGATTTTGGTGACACTTGCTCGACATTGCATTCTGGTCTTTTCTTGTTTGGTGAACATGGACCGATTTCTGAACGGTTTCATTTGGTGGATGAGCAGACTTTCCGCGCGAGTCGTCACTTTTCTGACATTTACATCTTGATTGAGATGTTATCCATACCTTGTCTGGCTGTTGAAGCCTCTCAAACATTTGAGAGAGCTGTAGCTCGTGGTGCCATTGTGACTCATTCTGTGGCCATGGTTTTGGAAAGGCGCCTTGCTCAAAGATTGAATCTTGATGCTAGATTTGTTGGGGATAATTTTCAGCAGACCGATGTTGCAGCAGAGGATGATGCCAATGAACAGCTGAGAGTCCAACAAGACGATTTTACTTCCGTTCTTGGTCTTGCTGAAACATTGGCCCTCTCTAGAGATCCGTGGATTAAGGGATTTGTGAAGATGCTGTATACATTATTATTTAAATGGTATGCTGACAAGACTTATCGAGGGAGAATGCTAAAGAGACTTGTAGAACAAGCCACTAGCACTACAGATAGTAGCCGTGAAGTTGATCTAGATTTGGATATCTTGGTGACCTTGGCTTCTGAAGAACAAGAAATTATCAGACCAGTTTTGAGTATGATGCGGGAGGTTGCTGAGCTTGCAAACGTTGATCGTGCTGCTCTGTGGCACCAGTTATGTGCCAGTGAAGATGAAATAATTCGCATGCGTGAAGAAAGGAAAGCCGAAAATGCTACTATGGTTAAAGAAAAAGCTGTTCTATCACAAAAACTAAGTGAATCTGAAGCTACTAACACTCGTCTTAAGTCTGAAATGAAGGCTGAGATTGACCGCTTTGCTCGAGAAAAGAAGGAACTATCCGAACAAATACAAGAAGTTGAGAGTCAGCTTGAGTGGCACCGCTCTGAGCGAGATGATGAAATCAGAAAGCTCACTACAGAGAGGAAAGTGCTTCACGATCGTCTTCATGATGCAGAGACACAACTCTCTCAATTGAAGTCCCGAAAACGTGATGAATTGAAGAAATTGGTGAAGGAGAAAAATGCTCTTGCTGAAAGGTTGAAAAGCGCTGAAGGTGCACGTAAAAGATTTGATGAAGAACTTAAACGGTATGCCACAGAGAATGTAACCCGAGAGGAAGTTCGACAGTCTCTTGAGGATGAAGTACGGCAATTGAAACAAACAGTGGAGCAAACAGAAGGAGAGAAACGGGAGAAGGAAGAGCAGGTTGCTCGGTGTGAGGCGTATATTGATGGGATGGAATCAAAATTACAGGCCTGCCAGCAATATATTCACACCCTCGAGGCTTCACTTCAGGAAGAAATGTCTCGGCATGCTCCTCTGTATGGGGCTGGTTTGGAAGCTCTATCAATGAAGGAGTTGGAGACACTTTCAAGCATCCATGAAGAAGGCCTCAGGCAGATCCATACCCTTCAGCAGCAGCGTAAAGGCAGTCCAGCCGGCAGTCCCCTTGTGAGCCCTCACGCCCTCCAACACGGTCATGGGTTATATCCTTCAACACCACCCCAGATGGCCGTCGGATTGCCTCCTCCTCTCATCCCAAATGGTGTCGGAATCCACAGCAATGGGCATGTGAATGGTAATGTTGGACCCTGGTTCAACCATTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004843 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006508 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009506 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009987 GO:0010033 GO:0016787 GO:0019538 GO:0019783 GO:0023052 GO:0030054 GO:0032870 GO:0036459 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0065007 GO:0070011 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0101005 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FancD2 MATH

Protein Analysis

1014

Amino Acids

112.9

Weight (kDa)

4.89

Isoelectric Point (pI)

46.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004493)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25320 AT2G25320 AT2G25320
fragaria_vesca	FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850 FvH4_2g28850
malus_domestica	MD08G1156500.v1.1 MD15G1127100.v1.1
prunus_persica	Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1 Prupe.1G482800_v2.0.a1
pyrus_communis	pycom08g12870 pycom15g11460
rosa_chinensis	RchiOBHm_Chr6g0297611
rosa_laevigata	RLG00000011577
rosa_multiflora	Rmu_ssc0000319.1_g000010
rosa_roxburghii	Rroxscaffold_7G00170320
rosa_rugosa	Rorug06G0274300 Rorug06G0274400.1 Rorug06G0274500 Rorug06G0274600
rosa_samantha	Rh6AG385100 Rh6BG393200 Rh6CG399000 Rh6DG385600
rosa_wichuraiana	Rw6G033550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	940
AbsI	CCTCGAGG	1 cut(s)	2711
Acc36I	ACCTGC	2 cut(s)	1108, 2626
AccB1I	GGYRCC	6 cut(s)	1018, 1313, 1622, 1662, 2079, 2307
AccBSI	CCGCTC	1 cut(s)	2313
AccI	GTMKAC	2 cut(s)	787, 1856
AccII	CGCG	2 cut(s)	1518, 1520
AciI	CCGC	7 cut(s)	411, 1108, 1277, 1516, 2035, 2242, 2311
AclI	AACGTT	1 cut(s)	2058
AclWI	GGATC	3 cut(s)	149, 1817, 2827
AcoI	YGGCCR	2 cut(s)	1644, 2943
AcsI	RAATTY	3 cut(s)	463, 1306, 1340
AcuI	CTGAAG	8 cut(s)	198, 528, 1293, 2016, 2214, 2502, 2708, 2828
AcyI	GRCGYC	2 cut(s)	937, 1663
AfaI	GTAC	3 cut(s)	753, 972, 2577
AfeI	AGCGCT	2 cut(s)	691, 2479
AfiI	CCNNNNNNNGG	3 cut(s)	548, 1276, 2756
AflII	CTTAAG	1 cut(s)	2213
AjiI	CACGTC	1 cut(s)	736
AjnI	CCWGG	4 cut(s)	754, 769, 803, 3023
AjuI	GAANNNNNNNTTGG	2 cut(s)	385, 417
AloI	GAACNNNNNNTCC	2 cut(s)	468, 500
Alw21I	GWGCWC	5 cut(s)	731, 867, 898, 1038, 2491
Alw26I	GTCTC	6 cut(s)	594, 1906, 2381, 2565, 2742, 2789
Alw44I	GTGCAC	1 cut(s)	2487
AlwI	GGATC	3 cut(s)	149, 1817, 2827
AlwNI	CAGNNNCTG	2 cut(s)	158, 1100
Ama87I	CYCGRG	3 cut(s)	2250, 2541, 2711
Aor51HI	AGCGCT	2 cut(s)	691, 2479
AoxI	GGCC	7 cut(s)	845, 941, 1644, 1809, 2685, 2821, 2943
ApaLI	GTGCAC	1 cut(s)	2487
ApoI	RAATTY	3 cut(s)	463, 1306, 1340
ArsI	GACNNNNNNTTYG	2 cut(s)	572, 604
Asp700I	GAANNNNTTC	4 cut(s)	300, 1077, 1488, 2109
AspLEI	GCGC	5 cut(s)	692, 985, 1520, 1665, 2480
AspS9I	GGNCC	3 cut(s)	1472, 1810, 3020
AsuHPI	GGTGA	8 cut(s)	212, 239, 575, 814, 1433, 1475, 1993, 2452
AvaI	CYCGRG	3 cut(s)	2250, 2541, 2711
AvaII	GGWCC	2 cut(s)	1472, 3020
AxyI	CCTNAGG	2 cut(s)	279, 2825
BaeGI	GKGCMC	2 cut(s)	1023, 2491
BaeI	ACNNNNGTAYC	2 cut(s)	42, 75
BalI	TGGCCA	1 cut(s)	1646
BanI	GGYRCC	6 cut(s)	1018, 1313, 1622, 1662, 2079, 2307
BanII	GRGCYC	5 cut(s)	345, 731, 867, 898, 2891
BauI	CACGAG	1 cut(s)	1617
BbsI	GAAGAC	1 cut(s)	2366
Bbv12I	GWGCWC	5 cut(s)	731, 867, 898, 1038, 2491
BccI	CCATC	7 cut(s)	301, 410, 590, 896, 2657, 2662, 2935
BceAI	ACGGC	3 cut(s)	1935, 2594, 2930
BcgI	CGANNNNNNTGC	6 cut(s)	976, 992, 1010, 1026, 2624, 2658
BciT130I	CCWGG	4 cut(s)	756, 771, 805, 3025
BciVI	GTATCC	1 cut(s)	676
BclI	TGATCA	1 cut(s)	133
BcoDI	GTCTC	6 cut(s)	594, 1906, 2381, 2565, 2742, 2789
BfmI	CTRYAG	5 cut(s)	488, 645, 1611, 1938, 2346
BfoI	RGCGCY	4 cut(s)	693, 986, 1666, 2481
BfrI	CTTAAG	1 cut(s)	2213
BfuAI	ACCTGC	2 cut(s)	1108, 2626
BfuI	GTATCC	1 cut(s)	676
BglII	AGATCT	1 cut(s)	106
BlpI	GCTNAGC	1 cut(s)	2046
Bme1390I	CCNGG	4 cut(s)	756, 771, 805, 3025
Bme18I	GGWCC	2 cut(s)	1472, 3020
BmeT110I	CYCGRG	3 cut(s)	2250, 2541, 2711
BmgBI	CACGTC	1 cut(s)	736
BmgT120I	GGNCC	3 cut(s)	1472, 1810, 3020
BmiI	GGNNCC	8 cut(s)	344, 1020, 1315, 1624, 1664, 2081, 2309, 3022
BmrFI	CCNGG	4 cut(s)	756, 771, 805, 3025
BmrI	ACTGGG	2 cut(s)	348, 1249
BmuI	ACTGGG	2 cut(s)	348, 1249
BoxI	GACNNNNGTC	1 cut(s)	84
BpiI	GAAGAC	1 cut(s)	2366
BpmI	CTGGAG	1 cut(s)	576
Bpu10I	CCTNAGC	1 cut(s)	849
Bpu1102I	GCTNAGC	1 cut(s)	2046
BpuEI	CTTGAG	2 cut(s)	2321, 2585
Bsa29I	ATCGAT	1 cut(s)	963
BsaAI	YACGTR	1 cut(s)	2492
BsaBI	GATNNNNATC	1 cut(s)	132
BsaHI	GRCGYC	2 cut(s)	937, 1663
BsaJI	CCNNGG	7 cut(s)	89, 770, 804, 1647, 1826, 1986, 3023
BsaXI	ACNNNNNCTCC	2 cut(s)	468, 498
Bsc4I	CCNNNNNNNGG	3 cut(s)	548, 1276, 2756
Bse118I	RCCGGY	1 cut(s)	2870
Bse1I	ACTGG	7 cut(s)	343, 978, 1143, 1255, 2018, 2083, 2094
Bse21I	CCTNAGG	2 cut(s)	279, 2825
Bse3DI	GCAATG	2 cut(s)	1436, 3001
Bse8I	GATNNNNATC	1 cut(s)	132
BseBI	CCWGG	4 cut(s)	756, 771, 805, 3025
BseCI	ATCGAT	1 cut(s)	963
BseDI	CCNNGG	7 cut(s)	89, 770, 804, 1647, 1826, 1986, 3023
BseJI	GATNNNNATC	1 cut(s)	132
BseLI	CCNNNNNNNGG	3 cut(s)	548, 1276, 2756
BseMI	GCAATG	2 cut(s)	1436, 3001
BseMII	CTCAG	9 cut(s)	293, 840, 959, 1053, 1748, 2037, 2223, 2307, 2839
BseNI	ACTGG	7 cut(s)	343, 978, 1143, 1255, 2018, 2083, 2094
BseRI	GAGGAG	4 cut(s)	875, 2739, 2949, 2952
BseSI	GKGCMC	2 cut(s)	1023, 2491
BseYI	CCCAGC	1 cut(s)	1365
BsgI	GTGCAG	1 cut(s)	936
Bsh1236I	CGCG	2 cut(s)	1518, 1520
Bsh1285I	CGRYCG	1 cut(s)	2371
BshFI	GGCC	7 cut(s)	847, 943, 1646, 1811, 2687, 2823, 2945
BshNI	GGYRCC	6 cut(s)	1018, 1313, 1622, 1662, 2079, 2307
BshVI	ATCGAT	1 cut(s)	963
BsiEI	CGRYCG	1 cut(s)	2371
BsiHKAI	GWGCWC	5 cut(s)	731, 867, 898, 1038, 2491
BsiHKCI	CYCGRG	3 cut(s)	2250, 2541, 2711
BsiSI	CCGG	1 cut(s)	2871
BslFI	GGGAC	3 cut(s)	565, 2395, 2862
BslI	CCNNNNNNNGG	3 cut(s)	548, 1276, 2756
BsmAI	GTCTC	6 cut(s)	594, 1906, 2381, 2565, 2742, 2789
BsmFI	GGGAC	3 cut(s)	565, 2395, 2862
BsmI	GAATGC	2 cut(s)	1441, 1908
BsnI	GGCC	7 cut(s)	847, 943, 1646, 1811, 2687, 2823, 2945
BsoBI	CYCGRG	3 cut(s)	2250, 2541, 2711
Bsp1286I	GDGCHC	8 cut(s)	345, 731, 867, 898, 1023, 1038, 2491, 2891
Bsp1720I	GCTNAGC	1 cut(s)	2046
Bsp19I	CCATGG	1 cut(s)	1647
BspACI	CCGC	7 cut(s)	411, 1108, 1277, 1516, 2035, 2242, 2311
BspANI	GGCC	7 cut(s)	847, 943, 1646, 1811, 2687, 2823, 2945
BspCNI	CTCAG	9 cut(s)	292, 841, 958, 1052, 1749, 2038, 2224, 2308, 2838
BspDI	ATCGAT	1 cut(s)	963
BspFNI	CGCG	2 cut(s)	1518, 1520
BspHI	TCATGA	1 cut(s)	2377
BspLI	GGNNCC	8 cut(s)	344, 1020, 1315, 1624, 1664, 2081, 2309, 3022
BspMAI	CTGCAG	1 cut(s)	492
BspMI	ACCTGC	2 cut(s)	1108, 2626
BspPI	GGATC	3 cut(s)	149, 1817, 2827
BspQI	GCTCTTC	1 cut(s)	2625
BspT107I	GGYRCC	6 cut(s)	1018, 1313, 1622, 1662, 2079, 2307
BspTI	CTTAAG	1 cut(s)	2213
BsrBI	CCGCTC	1 cut(s)	2313
BsrDI	GCAATG	2 cut(s)	1436, 3001
BsrFI	RCCGGY	1 cut(s)	2870
BsrI	ACTGG	7 cut(s)	343, 978, 1143, 1255, 2018, 2083, 2094
BssAI	RCCGGY	1 cut(s)	2870
BssECI	CCNNGG	7 cut(s)	89, 770, 804, 1647, 1826, 1986, 3023
BssNAI	GTATAC	1 cut(s)	1857
BssNI	GRCGYC	2 cut(s)	937, 1663
BssSI	CACGAG	1 cut(s)	1617
BssT1I	CCWWGG	3 cut(s)	89, 1647, 1986
Bst1107I	GTATAC	1 cut(s)	1857
Bst2BI	CACGAG	1 cut(s)	1617
Bst2UI	CCWGG	4 cut(s)	756, 771, 805, 3025
Bst4CI	ACNGT	8 cut(s)	55, 1145, 1357, 1488, 2520, 2559, 2596, 2909
Bst6I	CTCTTC	2 cut(s)	771, 2625
BstACI	GRCGYC	2 cut(s)	937, 1663
BstAFI	CTTAAG	1 cut(s)	2213
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstBAI	YACGTR	1 cut(s)	2492
BstC8I	GCNNGC	8 cut(s)	383, 495, 2052, 2117, 2689, 2693, 2745, 2872
BstDSI	CCRYGG	2 cut(s)	1647, 1826
BstEII	GGTNACC	1 cut(s)	1981
BstENI	CCTNNNNNAGG	1 cut(s)	546
BstFNI	CGCG	2 cut(s)	1518, 1520
BstH2I	RGCGCY	4 cut(s)	693, 986, 1666, 2481
BstHHI	GCGC	5 cut(s)	692, 985, 1520, 1665, 2480
BstMAI	GTCTC	6 cut(s)	594, 1906, 2381, 2565, 2742, 2789
BstMCI	CGRYCG	1 cut(s)	2371
BstNI	CCWGG	4 cut(s)	756, 771, 805, 3025
BstNSI	RCATGY	3 cut(s)	2119, 2747, 3005
BstPAI	GACNNNNGTC	1 cut(s)	84
BstPI	GGTNACC	1 cut(s)	1981
BstSCI	CCNGG	4 cut(s)	754, 769, 803, 3023
BstSFI	CTRYAG	5 cut(s)	488, 645, 1611, 1938, 2346
BstSLI	GKGCMC	2 cut(s)	1023, 2491
BstUI	CGCG	2 cut(s)	1518, 1520
BstV2I	GAAGAC	1 cut(s)	2366
BstX2I	RGATCY	4 cut(s)	106, 154, 1822, 2832
BstXI	CCANNNNNNTGG	2 cut(s)	1654, 2996
BstYI	RGATCY	4 cut(s)	106, 154, 1822, 2832
BstZ17I	GTATAC	1 cut(s)	1857
Bsu15I	ATCGAT	1 cut(s)	963
Bsu36I	CCTNAGG	2 cut(s)	279, 2825
BsuI	GTATCC	1 cut(s)	676
BsuRI	GGCC	7 cut(s)	847, 943, 1646, 1811, 2687, 2823, 2945
BsuTUI	ATCGAT	1 cut(s)	963
BtgI	CCRYGG	2 cut(s)	1647, 1826
BtgZI	GCGATG	1 cut(s)	429
BtrI	CACGTC	1 cut(s)	736
BtsI	GCAGTG	1 cut(s)	1156
BtsIMutI	CAGTG	4 cut(s)	1156, 1262, 2101, 2601
BveI	ACCTGC	2 cut(s)	1108, 2626
Cac8I	GCNNGC	8 cut(s)	383, 495, 2052, 2117, 2689, 2693, 2745, 2872
CaiI	CAGNNNCTG	2 cut(s)	158, 1100
CciI	TCATGA	1 cut(s)	2377
CfoI	GCGC	5 cut(s)	692, 985, 1520, 1665, 2480
Cfr10I	RCCGGY	1 cut(s)	2870
Cfr13I	GGNCC	3 cut(s)	1472, 1810, 3020
ClaI	ATCGAT	1 cut(s)	963
Csp6I	GTAC	3 cut(s)	752, 971, 2576
CviAII	CATG	8 cut(s)	1469, 1648, 2116, 2378, 2744, 2813, 2912, 3002
CviQI	GTAC	3 cut(s)	752, 971, 2576
DinI	GGCGCC	1 cut(s)	1664
DraI	TTTAAA	2 cut(s)	1243, 1870
EaeI	YGGCCR	2 cut(s)	1644, 2943
Eam1104I	CTCTTC	2 cut(s)	771, 2625
EarI	CTCTTC	2 cut(s)	771, 2625
Ecl136II	GAGCTC	3 cut(s)	729, 865, 896
Eco130I	CCWWGG	3 cut(s)	89, 1647, 1986
Eco147I	AGGCCT	2 cut(s)	2687, 2823
Eco24I	GRGCYC	5 cut(s)	345, 731, 867, 898, 2891
Eco32I	GATATC	2 cut(s)	214, 1975
Eco47I	GGWCC	2 cut(s)	1472, 3020
Eco47III	AGCGCT	2 cut(s)	691, 2479
Eco53kI	GAGCTC	3 cut(s)	729, 865, 896
Eco57I	CTGAAG	8 cut(s)	198, 528, 1293, 2016, 2214, 2502, 2708, 2828
Eco81I	CCTNAGG	2 cut(s)	279, 2825
Eco88I	CYCGRG	3 cut(s)	2250, 2541, 2711
Eco91I	GGTNACC	1 cut(s)	1981
EcoICRI	GAGCTC	3 cut(s)	729, 865, 896
EcoNI	CCTNNNNNAGG	1 cut(s)	546
EcoO65I	GGTNACC	1 cut(s)	1981
EcoRII	CCWGG	4 cut(s)	754, 769, 803, 3023
EcoRV	GATATC	2 cut(s)	214, 1975
EcoT14I	CCWWGG	3 cut(s)	89, 1647, 1986
EcoT22I	ATGCAT	1 cut(s)	145
EcoT38I	GRGCYC	5 cut(s)	345, 731, 867, 898, 2891
EgeI	GGCGCC	1 cut(s)	1664
EheI	GGCGCC	1 cut(s)	1664
ErhI	CCWWGG	3 cut(s)	89, 1647, 1986
FaeI	CATG	8 cut(s)	1472, 1651, 2119, 2381, 2747, 2816, 2915, 3005
FaqI	GGGAC	3 cut(s)	565, 2395, 2862
FatI	CATG	8 cut(s)	1468, 1647, 2115, 2377, 2743, 2812, 2911, 3001
FauI	CCCGC	1 cut(s)	2028
FbaI	TGATCA	1 cut(s)	133
FblI	GTMKAC	2 cut(s)	787, 1856
FriOI	GRGCYC	5 cut(s)	345, 731, 867, 898, 2891
GlaI	GCGC	5 cut(s)	691, 984, 1519, 1664, 2479
GsaI	CCCAGC	1 cut(s)	1369
GsuI	CTGGAG	1 cut(s)	576
HaeII	RGCGCY	4 cut(s)	693, 986, 1666, 2481
HaeIII	GGCC	7 cut(s)	847, 943, 1646, 1811, 2687, 2823, 2945
HapII	CCGG	1 cut(s)	2871
HhaI	GCGC	5 cut(s)	692, 985, 1520, 1665, 2480
Hin1I	GRCGYC	2 cut(s)	937, 1663
Hin1II	CATG	8 cut(s)	1472, 1651, 2119, 2381, 2747, 2816, 2915, 3005
Hin6I	GCGC	5 cut(s)	690, 983, 1518, 1663, 2478
HinP1I	GCGC	5 cut(s)	690, 983, 1518, 1663, 2478
HincII	GTYRAC	1 cut(s)	1136
HindII	GTYRAC	1 cut(s)	1136
HindIII	AAGCTT	2 cut(s)	299, 398
HpaII	CCGG	1 cut(s)	2871
HphI	GGTGA	8 cut(s)	212, 239, 575, 814, 1433, 1475, 1993, 2452
Hpy166II	GTNNAC	7 cut(s)	752, 788, 883, 1136, 1466, 1857, 2489
Hpy8I	GTNNAC	7 cut(s)	752, 788, 883, 1136, 1466, 1857, 2489
Hpy99I	CGWCG	2 cut(s)	942, 2951
HpyCH4III	ACNGT	8 cut(s)	55, 1145, 1357, 1488, 2520, 2559, 2596, 2909
HpyCH4IV	ACGT	5 cut(s)	735, 937, 2058, 2419, 2491
HpySE526I	ACGT	5 cut(s)	735, 937, 2058, 2419, 2491
Hsp92I	GRCGYC	2 cut(s)	937, 1663
Hsp92II	CATG	8 cut(s)	1472, 1651, 2119, 2381, 2747, 2816, 2915, 3005
HspAI	GCGC	5 cut(s)	690, 983, 1518, 1663, 2478
KasI	GGCGCC	1 cut(s)	1662
KroI	GCCGGC	1 cut(s)	2870
KroNI	GCCGGC	1 cut(s)	2872
Ksp22I	TGATCA	1 cut(s)	133
LguI	GCTCTTC	1 cut(s)	2625
LmnI	GCTCC	7 cut(s)	348, 605, 641, 862, 905, 2599, 2752
MaeII	ACGT	5 cut(s)	735, 937, 2058, 2419, 2491
MaeIII	GTNAC	8 cut(s)	283, 563, 820, 1421, 1526, 1630, 1981, 2536
MbiI	CCGCTC	1 cut(s)	2313
MfeI	CAATTG	2 cut(s)	2402, 2582
MflI	RGATCY	4 cut(s)	106, 154, 1822, 2832
MhlI	GDGCHC	8 cut(s)	345, 731, 867, 898, 1023, 1038, 2491, 2891
MlsI	TGGCCA	1 cut(s)	1646
MluNI	TGGCCA	1 cut(s)	1646
Mly113I	GGCGCC	1 cut(s)	1663
MlyI	GAGTC	5 cut(s)	486, 1531, 1627, 1770, 2302
MmeI	TCCRAC	6 cut(s)	1789, 2772, 2926, 2929, 2962, 2998
Mox20I	TGGCCA	1 cut(s)	1646
Mph1103I	ATGCAT	1 cut(s)	145
MroNI	GCCGGC	1 cut(s)	2870
MroXI	GAANNNNTTC	4 cut(s)	300, 1077, 1488, 2109
MscI	TGGCCA	1 cut(s)	1646
MseI	TTAA	7 cut(s)	146, 1242, 1833, 1869, 2154, 2214, 2514
MslI	CAYNNNNRTG	5 cut(s)	919, 1255, 2910, 2994, 3006
Msp20I	TGGCCA	1 cut(s)	1646
MspA1I	CMGCKG	1 cut(s)	1756
MspCI	CTTAAG	1 cut(s)	2213
MspI	CCGG	1 cut(s)	2871
MspR9I	CCNGG	4 cut(s)	756, 771, 805, 3025
MunI	CAATTG	2 cut(s)	2402, 2582
Mva1269I	GAATGC	2 cut(s)	1441, 1908
MvaI	CCWGG	4 cut(s)	756, 771, 805, 3025
MvnI	CGCG	2 cut(s)	1518, 1520
NaeI	GCCGGC	1 cut(s)	2872
NarI	GGCGCC	1 cut(s)	1663
NcoI	CCATGG	1 cut(s)	1647
NgoMIV	GCCGGC	1 cut(s)	2870
NlaIII	CATG	8 cut(s)	1472, 1651, 2119, 2381, 2747, 2816, 2915, 3005
NlaIV	GGNNCC	8 cut(s)	344, 1020, 1315, 1624, 1664, 2081, 2309, 3022
NmeAIII	GCCGAG	1 cut(s)	2719
NmuCI	GTSAC	7 cut(s)	283, 563, 820, 1421, 1526, 1630, 1981
NsiI	ATGCAT	1 cut(s)	145
NspI	RCATGY	3 cut(s)	2119, 2747, 3005
PaeI	GCATGC	2 cut(s)	2119, 2747
PaeR7I	CTCGAG	2 cut(s)	2250, 2711
PagI	TCATGA	1 cut(s)	2377
PceI	AGGCCT	2 cut(s)	2687, 2823
PciSI	GCTCTTC	1 cut(s)	2625
PctI	GAATGC	2 cut(s)	1441, 1908
PdiI	GCCGGC	1 cut(s)	2872
PdmI	GAANNNNTTC	4 cut(s)	300, 1077, 1488, 2109
PfeI	GAWTC	8 cut(s)	173, 443, 650, 1199, 1681, 2189, 2672, 2985
Ple19I	CGATCG	1 cut(s)	2371
PleI	GAGTC	5 cut(s)	485, 1530, 1627, 1769, 2301
PluTI	GGCGCC	1 cut(s)	1666
PpsI	GAGTC	5 cut(s)	485, 1530, 1627, 1769, 2301
Ppu21I	YACGTR	1 cut(s)	2492
PshAI	GACNNNNGTC	1 cut(s)	84
Psp124BI	GAGCTC	3 cut(s)	731, 867, 898
Psp1406I	AACGTT	1 cut(s)	2058
Psp6I	CCWGG	4 cut(s)	754, 769, 803, 3023
PspEI	GGTNACC	1 cut(s)	1981
PspFI	CCCAGC	1 cut(s)	1365
PspGI	CCWGG	4 cut(s)	754, 769, 803, 3023
PspN4I	GGNNCC	8 cut(s)	344, 1020, 1315, 1624, 1664, 2081, 2309, 3022
PspPI	GGNCC	3 cut(s)	1472, 1810, 3020
PspXI	VCTCGAGB	1 cut(s)	2711
PstI	CTGCAG	1 cut(s)	492
PstNI	CAGNNNCTG	2 cut(s)	158, 1100
PsuI	RGATCY	4 cut(s)	106, 154, 1822, 2832
PvuI	CGATCG	1 cut(s)	2371
PvuII	CAGCTG	1 cut(s)	1756
RsaI	GTAC	3 cut(s)	753, 972, 2577
RsaNI	GTAC	3 cut(s)	752, 971, 2576
RseI	CAYNNNNRTG	5 cut(s)	919, 1255, 2910, 2994, 3006
SacI	GAGCTC	3 cut(s)	731, 867, 898
SapI	GCTCTTC	1 cut(s)	2625
SaqAI	TTAA	7 cut(s)	146, 1242, 1833, 1869, 2154, 2214, 2514
Sau96I	GGNCC	3 cut(s)	1472, 1810, 3020
SchI	GAGTC	5 cut(s)	486, 1531, 1627, 1770, 2302
ScrFI	CCNGG	4 cut(s)	756, 771, 805, 3025
SduI	GDGCHC	8 cut(s)	345, 731, 867, 898, 1023, 1038, 2491, 2891
SfcI	CTRYAG	5 cut(s)	488, 645, 1611, 1938, 2346
SfoI	GGCGCC	1 cut(s)	1664
Sfr274I	CTCGAG	2 cut(s)	2250, 2711
SinI	GGWCC	2 cut(s)	1472, 3020
SlaI	CTCGAG	2 cut(s)	2250, 2711
SmiI	ATTTAAAT	1 cut(s)	1870
SmiMI	CAYNNNNRTG	5 cut(s)	919, 1255, 2910, 2994, 3006
SmlI	CTYRAG	5 cut(s)	2213, 2250, 2300, 2564, 2711
SmoI	CTYRAG	5 cut(s)	2213, 2250, 2300, 2564, 2711
SphI	GCATGC	2 cut(s)	2119, 2747
SseBI	AGGCCT	2 cut(s)	2687, 2823
SsiI	CCGC	7 cut(s)	411, 1108, 1277, 1516, 2035, 2242, 2311
SspDI	GGCGCC	1 cut(s)	1662
SspI	AATATT	1 cut(s)	75
SstI	GAGCTC	3 cut(s)	731, 867, 898
StuI	AGGCCT	2 cut(s)	2687, 2823
StyD4I	CCNGG	4 cut(s)	754, 769, 803, 3023
StyI	CCWWGG	3 cut(s)	89, 1647, 1986
SwaI	ATTTAAAT	1 cut(s)	1870
TaaI	ACNGT	8 cut(s)	55, 1145, 1357, 1488, 2520, 2559, 2596, 2909
TaiI	ACGT	5 cut(s)	738, 940, 2061, 2422, 2494
TaqI	TCGA	6 cut(s)	963, 1433, 1894, 2251, 2554, 2712
TaqII	GACCGA	2 cut(s)	1489, 1736
TatI	WGTACW	1 cut(s)	970
TauI	GCSGC	1 cut(s)	414
TfiI	GAWTC	8 cut(s)	173, 443, 650, 1199, 1681, 2189, 2672, 2985
Tru1I	TTAA	7 cut(s)	146, 1242, 1833, 1869, 2154, 2214, 2514
Tru9I	TTAA	7 cut(s)	146, 1242, 1833, 1869, 2154, 2214, 2514
TscAI	CASTG	4 cut(s)	1156, 1262, 2101, 2601
TseFI	GTSAC	7 cut(s)	283, 563, 820, 1421, 1526, 1630, 1981
Tsp45I	GTSAC	7 cut(s)	283, 563, 820, 1421, 1526, 1630, 1981
TspGWI	ACGGA	4 cut(s)	273, 335, 1774, 1815
TspRI	CASTG	4 cut(s)	1156, 1262, 2101, 2601
Vha464I	CTTAAG	1 cut(s)	2213
VneI	GTGCAC	1 cut(s)	2487
VpaK11BI	GGWCC	2 cut(s)	1472, 3020
XagI	CCTNNNNNAGG	1 cut(s)	546
XapI	RAATTY	3 cut(s)	463, 1306, 1340
XbaI	TCTAGA	5 cut(s)	109, 233, 898, 1817, 1963
XceI	RCATGY	3 cut(s)	2119, 2747, 3005
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1573, 2909
XhoI	CTCGAG	2 cut(s)	2250, 2711
XmiI	GTMKAC	2 cut(s)	787, 1856
XmnI	GAANNNNTTC	4 cut(s)	300, 1077, 1488, 2109
ZraI	GACGTC	1 cut(s)	938
Zsp2I	ATGCAT	1 cut(s)	145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.