Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003564

Physical Location & Seq

Genomic Coordinates Reverse (-)

14673840 .. 14677398

Gene Structure 3559 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G34790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGGCGTTTGCGATATCAAAGCGAAACGCAACCTTGTTTCTTGTAACGCTACTACTAATCTCCGTTCCATTGTCTTCCTCCACGCTACAACAAGATTTCGTGAAGTGCCTTGTCGACAACTCCGACGTCTCCTTCCCCATAACGGCGTCGTTTTTCTCACCGGACCAAAACGCTACTTTGTTTAAAGAGGAGCTTGAATCAACGGCACAGAATCTCCGTTACTTGACGCCGTCAAACCCGAAGCCCGTGTTCATATTCGAGCCTTTGTACGAGACGCATGTCCAAGCAGCGGTCGTGTGTGCCAAGAAGCTTCAGCTTCACCTCCGGCTACGTAGCGGTGGTCACGACTACGAAGGGCTCTCGTTTGTTGCCGAGGACGAAACGCCGTTTGTGATCGTTGATTTGTCGAAGCTTAGACAGGTTGACGTTGATTTGGACAGTAACAGTGCGTGGGCTCATGCTGGTGCTACCATCGGAGAGGTTTATTACAGGATCCAAGAGAAAAGCCAAACCCATGGTTTTCCGGCCGGTTTATGCTCAAGCCTTGGCATCGGTGGCCACTTAGTCGGTGGAGCGTACGGTTCCATGATGAGGAAGTTCGGTCTCGGCGCTGACAATGTCCTCGACGCCAGAATCGTCGACGCCAACGGCCAAATCCTCGATCGCGCGGCAATGGGAGAAGACGTCTTCTGGGCGATTCGCGGCGGCGGCGGTGGTAGCTTCGGCGTGATATTGGCCTGGAAGATTAAGCTCGTCCCCGTTCCGGCGACCGTTACGGTATTCACAGTCACGAAGACGCTTGAGCAAGACGGAACTAAAGTTTTATACAAATGGGAACAAATCGCTGATAAGCTTGACGATGATCTCTTCATTCGCGTCATTATTTCACCGGCCAGTAAAACCACCAAACCGGGAAATCGAACCATCTCGATGTCGTACCAAGCTCAGTTTCTCGGAGACTCCAATCGGCTCTTGCAGGTGATGCAGAAGAGTTTCCCTGAGTTAGGACTGACGAAGAAGGACTGCACAGAAATGAGCTGGATCAAATCAGTGATGTACATTGCAGGTTTTCCAAACAGTGCAGCACCGGAAGCTTTACTAGCCGGAAAATCATTGTTCAAGAATCACTTCAAAGCCAAGTCAGACTTTGTGAAAGAGCCAATTCCAGTAGAAGGTTTAGAAGGATTATGGGAAAGGTTTCTAGAAGAAGATTCACCGTTAACGATATGGAACCCTTACGGAGGAATGATGTCGAGGATCTCCGAGTCAGAGATACCTTTCCCTCATAGGAACGGGACATTGTTCAAGATTCAGTGGCTAAGCACGTGGCAAGATGGGAAAGTGAGCGAGGAAAGGCATATGAAGTGGATTAGGGAGATGTATAGTTACATGGAGCAGTATGTGTCGAAGAACCCGAGACAGGCGTATGTGAATTACAGGGATCTTGATTTGGGGACTAATGAAGGAGAGACTGATGCTAGAGAGTGGGGTGCTAAGTATTACAAAGGGAATTTCGAGAGGTTGGTGAAGATTAAGGGTGAGTTTGATCCTGATAATTTCTTCAGGCATGAACAGAGTGTTCCGACAAAGATTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000741 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0006950 GO:0006979 GO:0006996 GO:0006997 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009553 GO:0009559 GO:0009561 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010197 GO:0016043 GO:0016491 GO:0016614 GO:0016616 GO:0022414 GO:0030054 GO:0030154 GO:0030312 GO:0032501 GO:0032502 GO:0044464 GO:0045551 GO:0048229 GO:0048284 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050268 GO:0050896 GO:0055044 GO:0055114 GO:0061458 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

532

Amino Acids

59.65

Weight (kDa)

6.01

Isoelectric Point (pI)

33.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	85 - 220	4.8e-23	FAD binding domain
BBE	PF08031	475 - 528	5.7e-22	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30760 AT1G30760 AT2G34790 AT5G44390 AT5G44400
fragaria_vesca	FvH4_3g10920
malus_domestica	MD05G1268400.v1.1 MD05G1268500.v1.1 MD10G1244500.v1.1
prunus_persica	Prupe.4G096300_v2.0.a1 Prupe.4G096400_v2.0.a1
pyrus_communis	pycom05g25130 pycom05g25140 pycom10g20500
rosa_chinensis	RchiOBHm_Chr5g0017561 RchiOBHm_Chr5g0017591 RchiOBHm_Chr5g0017601 RchiOBHm_Chr5g0017621 RchiOBHm_Chr5g0017641
rosa_laevigata	RLG00000032298 RLG00000032301 RLG00000032302
rosa_multiflora	Rmu_sc0000346.1_g000021 Rmu_sc0000346.1_g000022 Rmu_sc0002565.1_g000007 Rmu_sc0003415.1_g000020
rosa_roxburghii	Rroxscaffold_1G00059870 Rroxscaffold_1G00059880 Rroxscaffold_1G00059890
rosa_rugosa	Rorug05G0036900 Rorug05G0037000 Rorug05G0037100
rosa_wichuraiana	Rw5G011310 Rw5G011320 Rw5G011330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	967
AatII	GACGTC	2 cut(s)	129, 687
Acc36I	ACCTGC	2 cut(s)	967, 1055
AccI	GTMKAC	2 cut(s)	114, 639
AccII	CGCG	4 cut(s)	666, 668, 702, 876
AciI	CCGC	7 cut(s)	290, 336, 668, 702, 705, 708, 711
AclWI	GGATC	6 cut(s)	487, 500, 1049, 1265, 1449, 1541
AcoI	YGGCCR	4 cut(s)	525, 556, 649, 891
AcsI	RAATTY	1 cut(s)	1510
AcuI	CTGAAG	2 cut(s)	296, 1546
AcvI	CACGTG	1 cut(s)	1326
AcyI	GRCGYC	6 cut(s)	126, 146, 227, 627, 642, 684
AfaI	GTAC	4 cut(s)	269, 578, 938, 1058
AfiI	CCNNNNNNNGG	8 cut(s)	142, 289, 591, 763, 1004, 1172, 1241, 1420
AgsI	TTSAA	4 cut(s)	197, 1120, 1132, 1306
AjnI	CCWGG	1 cut(s)	737
AjuI	GAANNNNNNNTTGG	2 cut(s)	933, 965
Alw26I	GTCTC	6 cut(s)	133, 266, 608, 951, 1411, 1463
AlwI	GGATC	6 cut(s)	487, 500, 1049, 1265, 1449, 1541
Ama87I	CYCGRG	1 cut(s)	1414
AoxI	GGCC	5 cut(s)	525, 556, 649, 735, 891
ApeKI	GCWGC	2 cut(s)	287, 1082
ApoI	RAATTY	1 cut(s)	1510
Asp700I	GAANNNNTTC	3 cut(s)	992, 1127, 1197
AspLEI	GCGC	2 cut(s)	611, 668
AspS9I	GGNCC	1 cut(s)	163
AsuC2I	CCSGG	1 cut(s)	912
AsuHPI	GGTGA	7 cut(s)	150, 311, 879, 991, 1206, 1537, 1550
AvaI	CYCGRG	1 cut(s)	1414
AvaII	GGWCC	1 cut(s)	163
BalI	TGGCCA	1 cut(s)	558
BamHI	GGATCC	1 cut(s)	492
BanII	GRGCYC	2 cut(s)	360, 457
BbrPI	CACGTG	1 cut(s)	1326
BbsI	GAAGAC	4 cut(s)	66, 679, 687, 800
BbvI	GCAGC	2 cut(s)	299, 1094
BccI	CCATC	3 cut(s)	479, 932, 1328
BceAI	ACGGC	5 cut(s)	159, 214, 219, 370, 664
BciT130I	CCWGG	1 cut(s)	739
BcnI	CCSGG	1 cut(s)	912
BcoDI	GTCTC	6 cut(s)	133, 266, 608, 951, 1411, 1463
BfaI	CTAG	3 cut(s)	1100, 1202, 1479
BfoI	RGCGCY	1 cut(s)	612
BfuAI	ACCTGC	2 cut(s)	967, 1055
BisI	GCNGC	6 cut(s)	288, 669, 703, 706, 709, 1083
BlpI	GCTNAGC	1 cut(s)	1319
BlsI	GCNGC	6 cut(s)	289, 670, 704, 707, 710, 1084
Bme1390I	CCNGG	2 cut(s)	739, 912
Bme18I	GGWCC	1 cut(s)	163
BmeT110I	CYCGRG	1 cut(s)	1414
BmgT120I	GGNCC	1 cut(s)	163
BmiI	GGNNCC	3 cut(s)	494, 583, 1232
BmrFI	CCNGG	2 cut(s)	739, 912
BmsI	GCATC	3 cut(s)	558, 972, 1465
BoxI	GACNNNNGTC	1 cut(s)	278
BpiI	GAAGAC	4 cut(s)	66, 679, 687, 800
Bpu1102I	GCTNAGC	1 cut(s)	1319
BpuEI	CTTGAG	2 cut(s)	523, 821
BpuMI	CCSGG	1 cut(s)	912
BsaAI	YACGTR	2 cut(s)	332, 1326
BsaHI	GRCGYC	6 cut(s)	126, 146, 227, 627, 642, 684
BsaI	GGTCTC	1 cut(s)	608
BsaJI	CCNNGG	3 cut(s)	372, 514, 544
BsaWI	WCCGGW	2 cut(s)	160, 1087
BsaXI	ACNNNNNCTCC	4 cut(s)	198, 228, 669, 699
Bsc4I	CCNNNNNNNGG	8 cut(s)	142, 289, 591, 763, 1004, 1172, 1241, 1420
Bse118I	RCCGGY	2 cut(s)	527, 889
Bse1I	ACTGG	2 cut(s)	894, 1166
Bse3DI	GCAATG	2 cut(s)	678, 1059
BseBI	CCWGG	1 cut(s)	739
BseDI	CCNNGG	3 cut(s)	372, 514, 544
BseLI	CCNNNNNNNGG	8 cut(s)	142, 289, 591, 763, 1004, 1172, 1241, 1420
BseMI	GCAATG	2 cut(s)	678, 1059
BseMII	CTCAG	2 cut(s)	959, 990
BseNI	ACTGG	2 cut(s)	894, 1166
BseRI	GAGGAG	1 cut(s)	203
BseX3I	CGGCCG	1 cut(s)	525
BseXI	GCAGC	2 cut(s)	299, 1094
BsgI	GTGCAG	2 cut(s)	1009, 1101
Bsh1236I	CGCG	4 cut(s)	666, 668, 702, 876
Bsh1285I	CGRYCG	4 cut(s)	294, 528, 664, 771
BshFI	GGCC	5 cut(s)	527, 558, 651, 737, 893
BsiEI	CGRYCG	4 cut(s)	294, 528, 664, 771
BsiHKCI	CYCGRG	1 cut(s)	1414
BsiSI	CCGG	9 cut(s)	161, 325, 524, 528, 764, 890, 911, 1088, 1104
BsiWI	CGTACG	1 cut(s)	576
BslFI	GGGAC	3 cut(s)	740, 1309, 1468
BslI	CCNNNNNNNGG	8 cut(s)	142, 289, 591, 763, 1004, 1172, 1241, 1420
BsmAI	GTCTC	6 cut(s)	133, 266, 608, 951, 1411, 1463
BsmBI	CGTCTC	2 cut(s)	133, 266
BsmFI	GGGAC	3 cut(s)	740, 1309, 1468
BsnI	GGCC	5 cut(s)	527, 558, 651, 737, 893
Bso31I	GGTCTC	1 cut(s)	608
BsoBI	CYCGRG	1 cut(s)	1414
Bsp1286I	GDGCHC	2 cut(s)	360, 457
Bsp1407I	TGTACA	1 cut(s)	1056
Bsp143I	GATC	8 cut(s)	393, 492, 661, 862, 1041, 1257, 1441, 1546
Bsp1720I	GCTNAGC	1 cut(s)	1319
Bsp19I	CCATGG	1 cut(s)	514
BspACI	CCGC	7 cut(s)	290, 336, 668, 702, 705, 708, 711
BspANI	GGCC	5 cut(s)	527, 558, 651, 737, 893
BspCNI	CTCAG	2 cut(s)	958, 991
BspFNI	CGCG	4 cut(s)	666, 668, 702, 876
BspLI	GGNNCC	3 cut(s)	494, 583, 1232
BspMI	ACCTGC	2 cut(s)	967, 1055
BspPI	GGATC	6 cut(s)	487, 500, 1049, 1265, 1449, 1541
BspTNI	GGTCTC	1 cut(s)	608
BsrDI	GCAATG	2 cut(s)	678, 1059
BsrFI	RCCGGY	2 cut(s)	527, 889
BsrGI	TGTACA	1 cut(s)	1056
BsrI	ACTGG	2 cut(s)	894, 1166
BssAI	RCCGGY	2 cut(s)	527, 889
BssECI	CCNNGG	3 cut(s)	372, 514, 544
BssMI	GATC	8 cut(s)	393, 492, 661, 862, 1041, 1257, 1441, 1546
BssNI	GRCGYC	6 cut(s)	126, 146, 227, 627, 642, 684
BssT1I	CCWWGG	2 cut(s)	514, 544
Bst2UI	CCWGG	1 cut(s)	739
Bst4CI	ACNGT	8 cut(s)	440, 446, 581, 772, 778, 787, 1079, 1218
Bst6I	CTCTTC	2 cut(s)	872, 983
BstACI	GRCGYC	6 cut(s)	126, 146, 227, 627, 642, 684
BstAPI	GCANNNNNTGC	1 cut(s)	982
BstAUI	TGTACA	1 cut(s)	1056
BstBAI	YACGTR	2 cut(s)	332, 1326
BstDEI	CTNAG	6 cut(s)	413, 562, 945, 999, 1319, 1494
BstDSI	CCRYGG	1 cut(s)	514
BstENI	CCTNNNNNAGG	2 cut(s)	1002, 1239
BstFNI	CGCG	4 cut(s)	666, 668, 702, 876
BstH2I	RGCGCY	1 cut(s)	612
BstHHI	GCGC	2 cut(s)	611, 668
BstKTI	GATC	8 cut(s)	396, 495, 664, 865, 1044, 1260, 1444, 1549
BstMAI	GTCTC	6 cut(s)	133, 266, 608, 951, 1411, 1463
BstMBI	GATC	8 cut(s)	393, 492, 661, 862, 1041, 1257, 1441, 1546
BstMCI	CGRYCG	4 cut(s)	294, 528, 664, 771
BstMWI	GCNNNNNNNGC	6 cut(s)	555, 708, 717, 982, 1091, 1100
BstNI	CCWGG	1 cut(s)	739
BstNSI	RCATGY	1 cut(s)	281
BstPAI	GACNNNNGTC	1 cut(s)	278
BstSCI	CCNGG	2 cut(s)	737, 910
BstSNI	TACGTA	1 cut(s)	332
BstUI	CGCG	4 cut(s)	666, 668, 702, 876
BstV1I	GCAGC	2 cut(s)	299, 1094
BstV2I	GAAGAC	4 cut(s)	66, 679, 687, 800
BstX2I	RGATCY	3 cut(s)	492, 1257, 1441
BstXI	CCANNNNNNTGG	1 cut(s)	515
BstYI	RGATCY	3 cut(s)	492, 1257, 1441
BstZI	CGGCCG	1 cut(s)	525
BsuRI	GGCC	5 cut(s)	527, 558, 651, 737, 893
BtgI	CCRYGG	1 cut(s)	514
BtsIMutI	CAGTG	4 cut(s)	451, 1056, 1084, 1319
BveI	ACCTGC	2 cut(s)	967, 1055
CfoI	GCGC	2 cut(s)	611, 668
Cfr10I	RCCGGY	2 cut(s)	527, 889
Cfr13I	GGNCC	1 cut(s)	163
CseI	GACGC	7 cut(s)	135, 235, 283, 635, 650, 805, 865
Csp6I	GTAC	4 cut(s)	268, 577, 937, 1057
CviAII	CATG	6 cut(s)	278, 458, 515, 586, 1390, 1568
CviQI	GTAC	4 cut(s)	268, 577, 937, 1057
DdeI	CTNAG	6 cut(s)	413, 562, 945, 999, 1319, 1494
DpnI	GATC	8 cut(s)	395, 494, 663, 864, 1043, 1259, 1443, 1548
DpnII	GATC	8 cut(s)	393, 492, 661, 862, 1041, 1257, 1441, 1546
DraI	TTTAAA	1 cut(s)	184
EaeI	YGGCCR	4 cut(s)	525, 556, 649, 891
EagI	CGGCCG	1 cut(s)	525
Eam1104I	CTCTTC	2 cut(s)	872, 983
EarI	CTCTTC	2 cut(s)	872, 983
EclXI	CGGCCG	1 cut(s)	525
Eco105I	TACGTA	1 cut(s)	332
Eco130I	CCWWGG	2 cut(s)	514, 544
Eco24I	GRGCYC	2 cut(s)	360, 457
Eco31I	GGTCTC	1 cut(s)	608
Eco32I	GATATC	1 cut(s)	15
Eco47I	GGWCC	1 cut(s)	163
Eco52I	CGGCCG	1 cut(s)	525
Eco57I	CTGAAG	2 cut(s)	296, 1546
Eco72I	CACGTG	1 cut(s)	1326
Eco88I	CYCGRG	1 cut(s)	1414
EcoNI	CCTNNNNNAGG	2 cut(s)	1002, 1239
EcoRII	CCWGG	1 cut(s)	737
EcoRV	GATATC	1 cut(s)	15
EcoT14I	CCWWGG	2 cut(s)	514, 544
EcoT38I	GRGCYC	2 cut(s)	360, 457
ErhI	CCWWGG	2 cut(s)	514, 544
Esp3I	CGTCTC	2 cut(s)	133, 266
FaeI	CATG	6 cut(s)	281, 461, 518, 589, 1393, 1571
FalI	AAGNNNNNCTT	6 cut(s)	177, 209, 1112, 1144, 1130, 1162
FaqI	GGGAC	3 cut(s)	740, 1309, 1468
FatI	CATG	6 cut(s)	277, 457, 514, 585, 1389, 1567
FauNDI	CATATG	1 cut(s)	1359
FblI	GTMKAC	2 cut(s)	114, 639
Fnu4HI	GCNGC	6 cut(s)	288, 669, 703, 706, 709, 1083
FriOI	GRGCYC	2 cut(s)	360, 457
Fsp4HI	GCNGC	6 cut(s)	288, 669, 703, 706, 709, 1083
FspBI	CTAG	3 cut(s)	1100, 1202, 1479
GlaI	GCGC	2 cut(s)	610, 667
GluI	GCNGC	6 cut(s)	288, 669, 703, 706, 709, 1083
HaeII	RGCGCY	1 cut(s)	612
HaeIII	GGCC	5 cut(s)	527, 558, 651, 737, 893
HapII	CCGG	9 cut(s)	161, 325, 524, 528, 764, 890, 911, 1088, 1104
HgaI	GACGC	7 cut(s)	135, 235, 283, 635, 650, 805, 865
HhaI	GCGC	2 cut(s)	611, 668
Hin1I	GRCGYC	6 cut(s)	126, 146, 227, 627, 642, 684
Hin1II	CATG	6 cut(s)	281, 461, 518, 589, 1393, 1571
Hin6I	GCGC	2 cut(s)	609, 666
HinP1I	GCGC	2 cut(s)	609, 666
HincII	GTYRAC	4 cut(s)	115, 424, 640, 1221
HindII	GTYRAC	4 cut(s)	115, 424, 640, 1221
HindIII	AAGCTT	4 cut(s)	308, 410, 851, 1092
HinfI	GANTC	9 cut(s)	197, 211, 633, 697, 959, 1123, 1211, 1265, 1309
HpaI	GTTAAC	1 cut(s)	1221
HpaII	CCGG	9 cut(s)	161, 325, 524, 528, 764, 890, 911, 1088, 1104
HphI	GGTGA	7 cut(s)	150, 311, 879, 991, 1206, 1537, 1550
Hpy166II	GTNNAC	4 cut(s)	115, 424, 640, 1221
Hpy188I	TCNGA	7 cut(s)	124, 476, 956, 1144, 1264, 1270, 1584
Hpy8I	GTNNAC	4 cut(s)	115, 424, 640, 1221
Hpy99I	CGWCG	5 cut(s)	128, 151, 629, 641, 644
HpyAV	CCTTC	6 cut(s)	142, 347, 1012, 1166, 1175, 1457
HpyCH4III	ACNGT	8 cut(s)	440, 446, 581, 772, 778, 787, 1079, 1218
HpyCH4IV	ACGT	5 cut(s)	126, 331, 426, 684, 1325
HpyCH4V	TGCA	5 cut(s)	976, 985, 1026, 1064, 1082
HpyF10VI	GCNNNNNNNGC	6 cut(s)	555, 708, 717, 982, 1091, 1100
HpyF3I	CTNAG	6 cut(s)	413, 562, 945, 999, 1319, 1494
HpySE526I	ACGT	5 cut(s)	126, 331, 426, 684, 1325
Hsp92I	GRCGYC	6 cut(s)	126, 146, 227, 627, 642, 684
Hsp92II	CATG	6 cut(s)	281, 461, 518, 589, 1393, 1571
HspAI	GCGC	2 cut(s)	609, 666
KspAI	GTTAAC	1 cut(s)	1221
Kzo9I	GATC	8 cut(s)	393, 492, 661, 862, 1041, 1257, 1441, 1546
LmnI	GCTCC	3 cut(s)	190, 572, 1393
Lsp1109I	GCAGC	2 cut(s)	299, 1094
LweI	GCATC	3 cut(s)	558, 972, 1465
MaeI	CTAG	3 cut(s)	1100, 1202, 1479
MaeII	ACGT	5 cut(s)	126, 331, 426, 684, 1325
MaeIII	GTNAC	7 cut(s)	43, 218, 341, 440, 772, 787, 1385
MalI	GATC	8 cut(s)	395, 494, 663, 864, 1043, 1259, 1443, 1548
MboI	GATC	8 cut(s)	393, 492, 661, 862, 1041, 1257, 1441, 1546
MflI	RGATCY	3 cut(s)	492, 1257, 1441
MhlI	GDGCHC	2 cut(s)	360, 457
MlsI	TGGCCA	1 cut(s)	558
MluCI	AATT	4 cut(s)	1161, 1432, 1510, 1555
MluNI	TGGCCA	1 cut(s)	558
MlyI	GAGTC	2 cut(s)	953, 1274
MmeI	TCCRAC	1 cut(s)	147
Mox20I	TGGCCA	1 cut(s)	558
MroXI	GAANNNNTTC	3 cut(s)	992, 1127, 1197
MscI	TGGCCA	1 cut(s)	558
MseI	TTAA	4 cut(s)	183, 747, 1220, 1533
MslI	CAYNNNNRTG	3 cut(s)	462, 929, 1031
Msp20I	TGGCCA	1 cut(s)	558
MspA1I	CMGCKG	1 cut(s)	290
MspI	CCGG	9 cut(s)	161, 325, 524, 528, 764, 890, 911, 1088, 1104
MspR9I	CCNGG	2 cut(s)	739, 912
MvaI	CCWGG	1 cut(s)	739
MvnI	CGCG	4 cut(s)	666, 668, 702, 876
MwoI	GCNNNNNNNGC	6 cut(s)	555, 708, 717, 982, 1091, 1100
NciI	CCSGG	1 cut(s)	912
NcoI	CCATGG	1 cut(s)	514
NdeI	CATATG	1 cut(s)	1359
NdeII	GATC	8 cut(s)	393, 492, 661, 862, 1041, 1257, 1441, 1546
NlaIII	CATG	6 cut(s)	281, 461, 518, 589, 1393, 1571
NlaIV	GGNNCC	3 cut(s)	494, 583, 1232
NmeAIII	GCCGAG	2 cut(s)	397, 585
NmuCI	GTSAC	2 cut(s)	341, 787
NspI	RCATGY	1 cut(s)	281
PaqCI	CACCTGC	1 cut(s)	967
PcsI	WCGNNNNNNNCGW	3 cut(s)	120, 633, 1412
PdmI	GAANNNNTTC	3 cut(s)	992, 1127, 1197
PfeI	GAWTC	7 cut(s)	197, 211, 633, 697, 1123, 1211, 1309
Pfl23II	CGTACG	1 cut(s)	576
PflFI	GACNNNGTC	2 cut(s)	229, 617
PkrI	GCNGC	6 cut(s)	289, 670, 704, 707, 710, 1084
Ple19I	CGATCG	1 cut(s)	664
PleI	GAGTC	2 cut(s)	953, 1273
PmaCI	CACGTG	1 cut(s)	1326
PmlI	CACGTG	1 cut(s)	1326
PpsI	GAGTC	2 cut(s)	953, 1273
Ppu21I	YACGTR	2 cut(s)	332, 1326
PshAI	GACNNNNGTC	1 cut(s)	278
Psp6I	CCWGG	1 cut(s)	737
PspCI	CACGTG	1 cut(s)	1326
PspGI	CCWGG	1 cut(s)	737
PspLI	CGTACG	1 cut(s)	576
PspN4I	GGNNCC	3 cut(s)	494, 583, 1232
PspPI	GGNCC	1 cut(s)	163
PsuI	RGATCY	3 cut(s)	492, 1257, 1441
PsyI	GACNNNGTC	2 cut(s)	229, 617
PvuI	CGATCG	1 cut(s)	664
RsaI	GTAC	4 cut(s)	269, 578, 938, 1058
RsaNI	GTAC	4 cut(s)	268, 577, 937, 1057
RseI	CAYNNNNRTG	3 cut(s)	462, 929, 1031
SalI	GTCGAC	2 cut(s)	113, 638
SaqAI	TTAA	4 cut(s)	183, 747, 1220, 1533
SatI	GCNGC	6 cut(s)	288, 669, 703, 706, 709, 1083
Sau3AI	GATC	8 cut(s)	393, 492, 661, 862, 1041, 1257, 1441, 1546
Sau96I	GGNCC	1 cut(s)	163
SchI	GAGTC	2 cut(s)	953, 1274
ScrFI	CCNGG	2 cut(s)	739, 912
SduI	GDGCHC	2 cut(s)	360, 457
SfaNI	GCATC	3 cut(s)	558, 972, 1465
SgrDI	CGTCGACG	1 cut(s)	638
SinI	GGWCC	1 cut(s)	163
SmiMI	CAYNNNNRTG	3 cut(s)	462, 929, 1031
SmlI	CTYRAG	2 cut(s)	538, 800
SmoI	CTYRAG	2 cut(s)	538, 800
SnaBI	TACGTA	1 cut(s)	332
Sse9I	AATT	4 cut(s)	1161, 1432, 1510, 1555
SsiI	CCGC	7 cut(s)	290, 336, 668, 702, 705, 708, 711
SspMI	CTAG	3 cut(s)	1100, 1202, 1479
StyD4I	CCNGG	2 cut(s)	737, 910
StyI	CCWWGG	2 cut(s)	514, 544
TaaI	ACNGT	8 cut(s)	440, 446, 581, 772, 778, 787, 1079, 1218
TaiI	ACGT	5 cut(s)	129, 334, 429, 687, 1328
TaqII	GACCGA	1 cut(s)	590
TasI	AATT	4 cut(s)	1161, 1432, 1510, 1555
TatI	WGTACW	1 cut(s)	1056
TauI	GCSGC	4 cut(s)	671, 705, 708, 711
TfiI	GAWTC	7 cut(s)	197, 211, 633, 697, 1123, 1211, 1309
Tru1I	TTAA	4 cut(s)	183, 747, 1220, 1533
Tru9I	TTAA	4 cut(s)	183, 747, 1220, 1533
TscAI	CASTG	4 cut(s)	451, 1056, 1084, 1319
TseFI	GTSAC	2 cut(s)	341, 787
TseI	GCWGC	2 cut(s)	287, 1082
Tsp45I	GTSAC	2 cut(s)	341, 787
TspDTI	ATGAA	5 cut(s)	241, 859, 1376, 1476, 1584
TspGWI	ACGGA	4 cut(s)	52, 206, 825, 1254
TspRI	CASTG	4 cut(s)	451, 1056, 1084, 1319
Tth111I	GACNNNGTC	2 cut(s)	229, 617
VpaK11BI	GGWCC	1 cut(s)	163
XagI	CCTNNNNNAGG	2 cut(s)	1002, 1239
XapI	RAATTY	1 cut(s)	1510
XbaI	TCTAGA	1 cut(s)	1201
XceI	RCATGY	1 cut(s)	281
XcmI	CCANNNNNNNNNTGG	1 cut(s)	566
XmiI	GTMKAC	2 cut(s)	114, 639
XmnI	GAANNNNTTC	3 cut(s)	992, 1127, 1197
XspI	CTAG	3 cut(s)	1100, 1202, 1479
ZraI	GACGTC	2 cut(s)	127, 685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.