Prupe.4G096300_v2.0.a1

Belongs to the oxygen-dependent FAD-linked oxidoreductase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
4835231 .. 4836853
1623 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G096300.1

Sequence Viewer

Length: 1614 bp
ATGATGCTTCCAAACTTTTCAGTTTCTTCATTGGTTTTTTTCCTTCTGATATCAGCTTCATGGGCACATACTCGGACTCCACCTTCAATACAAGACAATTTAACCAAATGCCTCTCAAAATATTCTCAGACTTCCGTTCCATTCTCCCAAGCCTTTTTCACTCCAAATACGTCTACATTCACTACTGTCCTCGAATCTTCTGCACAAAACCTCAGGTATTTGGTACCTTCAATGCCAAAGCCAGAGTTTATTTTCACACCAGTGCATGATTCTCATGTCCAAGCTGCTGTTATTTGCTCAAAAAAGCTTCAAATACACCTCAGGGTCAGAAGTGGAGGCCATGATTATGAAGGCCTCTCTTATGTATCCCAGATTGAAACACCTTTCATTGTTGTAGACCTTGCCAAGCTTCGGTCAGTCAATGTTGATATCAAAAACAACGCCGCATGGATTCAAGCTGGTGCCACCATTGGTGAGGTTTACTACAGAGTTGCAGAGAAAAGCAAAACTCATGGTTTTCCTGCCGGGCTCTGCACGAGTCTAGGCGTTGGCGGACATATAACTGGAGGTGCATATGGTTCCATGATGAGGAAATATGGCCTTGCTGCTGATAACGCCATTGATGCTCGAATTGTTGACGTCAAAGGGAAAATCCTTGATCGAAAGGCAATGGGAGAGGACCTGTTTTGGGCCATCAGAGGAGGTGGAGGAGCAAGCTTTGGAATCATCCTTTGGTGGAAGATAAAGCTGGTTCCTGTTCCAGCAACTGTGACAGTTTTTGCAGTTGCTAAGACCTTGGAAACAGGTGCCACAAAGCTCCTCCATAGATGGCAACAAGTAGCTCCAGTAATTGATGAGGATCTGTTTATCAGAGTTTTCATACAATTAGCAAATGGCACCAAAACTGGCAGTAAAACAGTCACAACTGTTTACCAGGCCCAATTTCTTGGAGGTGCTGATAGATTAGTTCATGTCATGCAGAAAAGCTTCCCTGAATTGGGCGTGACAAGAAAAGATTGTACTGAAACAAGTTGGATCAAGGCTGTGCTGTTCATAGCAGGGTACCCAAGTGGAACTCCAACTGAGGTTTTGCTTCAAGGAAAATCCACAGGCAAGAACTACTTCAAAGCCAAATCTGACTTTGTCCAGAACCCAATTCCAGAAACTGGGCTTCAGGGGCTATGGAAGAGGTTGCTGCAAGAAGCCTCTCCTCTGATGATTTTGACCCCTTATGGTGGAATGATGAGCAAGATTTCAGAGTCTGCAATACCTTTTCCCCACAGAGGGGTGCTGTTTAAAATTCAGTACGTGAGTGGATGGCAAGAGGGAGATAAAACTGAGGCAAAGCACATGAATTGGATCAGGAAGCTTTACAGTTACATGGCCCCTTATGTTACAATGTCTCCAAGGCAAGCATATGTGAATTATAAGGATCTTGATTTGGGGATTAACAAGAAGAGCAACACAAGCTTTATTGAAGCGAGTTCTTGGGGTTACAGGTATTTCAAGGACAACTTTAACAGATTGGTAAAAATTAAGACCAAAGTTGATCCTAATAACTTCTTCAGGCATGAACAGAGCATCCCACCTCTTCCAAAAAGAGGACATCACTAG

Protein Analysis

538

Amino Acids

59.83

Weight (kDa)

9.65

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1428
AatII GACGTC 1 cut(s) 642
Acc65I GGTACC 2 cut(s) 223, 1062
AccB1I GGYRCC 5 cut(s) 223, 461, 806, 896, 1062
AccB7I CCANNNNNTGG 1 cut(s) 1166
AccI GTMKAC 2 cut(s) 173, 396
AciI CCGC 2 cut(s) 444, 552
AclWI GGATC 5 cut(s) 867, 1043, 1367, 1440, 1544
AcsI RAATTY 1 cut(s) 1299
AcuI CTGAAG 2 cut(s) 1157, 1549
AcyI GRCGYC 1 cut(s) 639
AfaI GTAC 4 cut(s) 225, 1021, 1064, 1307
AgsI TTSAA 9 cut(s) 87, 231, 311, 377, 455, 1097, 1126, 1478, 1507
AjnI CCWGG 1 cut(s) 933
AjuI GAANNNNNNNTTGG 2 cut(s) 715, 747
AleI CACNNNNGTG 1 cut(s) 260
AloI GAACNNNNNNTCC 2 cut(s) 1566, 1598
Alw26I GTCTC 1 cut(s) 1407
AlwI GGATC 5 cut(s) 867, 1043, 1367, 1440, 1544
AlwNI CAGNNNCTG 3 cut(s) 767, 1166, 1262
AoxI GGCC 6 cut(s) 337, 352, 598, 690, 936, 1383
ApeKI GCWGC 3 cut(s) 284, 605, 1195
ApoI RAATTY 1 cut(s) 1299
Asp700I GAANNNNTTC 2 cut(s) 986, 1121
Asp718I GGTACC 2 cut(s) 223, 1062
AspS9I GGNCC 4 cut(s) 679, 690, 937, 1384
AsuC2I CCSGG 1 cut(s) 526
AsuHPI GGTGA 1 cut(s) 485
AvaII GGWCC 1 cut(s) 679
AxyI CCTNAGG 2 cut(s) 212, 320
BaeGI GKGCMC 1 cut(s) 67
BaeI ACNNNNGTAYC 2 cut(s) 1054, 1087
BanI GGYRCC 5 cut(s) 223, 461, 806, 896, 1062
BanII GRGCYC 1 cut(s) 531
BauI CACGAG 1 cut(s) 535
BbvI GCAGC 3 cut(s) 271, 592, 1182
BccI CCATC 3 cut(s) 701, 822, 1311
BcgI CGANNNNNNTGC 2 cut(s) 182, 216
BciT130I CCWGG 1 cut(s) 935
BciVI GTATCC 1 cut(s) 376
BcnI CCSGG 1 cut(s) 526
BcoDI GTCTC 1 cut(s) 1407
BfaI CTAG 2 cut(s) 542, 1612
BfmI CTRYAG 1 cut(s) 484
BfuI GTATCC 1 cut(s) 376
BisI GCNGC 4 cut(s) 285, 444, 606, 1196
BlsI GCNGC 4 cut(s) 286, 445, 607, 1197
Bme1390I CCNGG 2 cut(s) 526, 935
Bme18I GGWCC 1 cut(s) 679
BmgT120I GGNCC 4 cut(s) 679, 690, 937, 1384
BmiI GGNNCC 8 cut(s) 225, 463, 580, 753, 808, 898, 1064, 1386
BmrFI CCNGG 2 cut(s) 526, 935
BmrI ACTGGG 1 cut(s) 1176
BmsI GCATC 2 cut(s) 613, 1590
BmuI ACTGGG 1 cut(s) 1176
BpmI CTGGAG 2 cut(s) 585, 828
BpuMI CCSGG 1 cut(s) 526
BsaAI YACGTR 1 cut(s) 1309
BsaBI GATNNNNATC 1 cut(s) 858
BsaHI GRCGYC 1 cut(s) 639
BsaJI CCNNGG 2 cut(s) 795, 1406
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 1387, 1417
Bse1I ACTGG 5 cut(s) 260, 568, 845, 910, 1171
Bse21I CCTNAGG 2 cut(s) 212, 320
Bse3DI GCAATG 1 cut(s) 675
Bse8I GATNNNNATC 1 cut(s) 858
BseBI CCWGG 1 cut(s) 935
BseDI CCNNGG 2 cut(s) 795, 1406
BseGI GGATG 3 cut(s) 726, 1322, 1581
BseJI GATNNNNATC 1 cut(s) 858
BseMI GCAATG 1 cut(s) 675
BseMII CTCAG 5 cut(s) 140, 226, 334, 1074, 1329
BseNI ACTGG 5 cut(s) 260, 568, 845, 910, 1171
BseRI GAGGAG 4 cut(s) 714, 723, 809, 1200
BseSI GKGCMC 1 cut(s) 67
BseXI GCAGC 3 cut(s) 271, 592, 1182
BsgI GTGCAG 2 cut(s) 186, 517
BshFI GGCC 6 cut(s) 339, 354, 600, 692, 938, 1385
BshNI GGYRCC 5 cut(s) 223, 461, 806, 896, 1062
BsiSI CCGG 1 cut(s) 525
BsmAI GTCTC 1 cut(s) 1407
BsnI GGCC 6 cut(s) 339, 354, 600, 692, 938, 1385
Bsp1286I GDGCHC 2 cut(s) 67, 531
Bsp143I GATC 6 cut(s) 658, 859, 1035, 1359, 1432, 1549
BspACI CCGC 2 cut(s) 444, 552
BspANI GGCC 6 cut(s) 339, 354, 600, 692, 938, 1385
BspCNI CTCAG 5 cut(s) 139, 225, 333, 1075, 1330
BspLI GGNNCC 8 cut(s) 225, 463, 580, 753, 808, 898, 1064, 1386
BspPI GGATC 5 cut(s) 867, 1043, 1367, 1440, 1544
BspQI GCTCTTC 1 cut(s) 1451
BspT107I GGYRCC 5 cut(s) 223, 461, 806, 896, 1062
BsrDI GCAATG 1 cut(s) 675
BsrI ACTGG 5 cut(s) 260, 568, 845, 910, 1171
BssECI CCNNGG 2 cut(s) 795, 1406
BssMI GATC 6 cut(s) 658, 859, 1035, 1359, 1432, 1549
BssNI GRCGYC 1 cut(s) 639
BssSI CACGAG 1 cut(s) 535
BssT1I CCWWGG 2 cut(s) 795, 1406
Bst2BI CACGAG 1 cut(s) 535
Bst2UI CCWGG 1 cut(s) 935
Bst4CI ACNGT 6 cut(s) 187, 769, 775, 919, 928, 1376
Bst6I CTCTTC 3 cut(s) 1181, 1451, 1596
BstACI GRCGYC 1 cut(s) 639
BstBAI YACGTR 1 cut(s) 1309
BstC8I GCNNGC 2 cut(s) 715, 1413
BstDEI CTNAG 6 cut(s) 126, 212, 320, 789, 1083, 1338
BstF5I GGATG 3 cut(s) 726, 1322, 1581
BstKTI GATC 6 cut(s) 661, 862, 1038, 1362, 1435, 1552
BstMAI GTCTC 1 cut(s) 1407
BstMBI GATC 6 cut(s) 658, 859, 1035, 1359, 1432, 1549
BstMWI GCNNNNNNNGC 5 cut(s) 62, 614, 623, 1177, 1467
BstNI CCWGG 1 cut(s) 935
BstSCI CCNGG 2 cut(s) 524, 933
BstSFI CTRYAG 1 cut(s) 484
BstSLI GKGCMC 1 cut(s) 67
BstV1I GCAGC 3 cut(s) 271, 592, 1182
BstX2I RGATCY 2 cut(s) 859, 1432
BstXI CCANNNNNNTGG 1 cut(s) 947
BstYI RGATCY 2 cut(s) 859, 1432
Bsu36I CCTNAGG 2 cut(s) 212, 320
BsuI GTATCC 1 cut(s) 376
BsuRI GGCC 6 cut(s) 339, 354, 600, 692, 938, 1385
BtsCI GGATG 3 cut(s) 726, 1322, 1581
BtsIMutI CAGTG 1 cut(s) 267
Cac8I GCNNGC 2 cut(s) 715, 1413
CaiI CAGNNNCTG 3 cut(s) 767, 1166, 1262
Cfr13I GGNCC 4 cut(s) 679, 690, 937, 1384
Csp6I GTAC 4 cut(s) 224, 1020, 1063, 1306
CviQI GTAC 4 cut(s) 224, 1020, 1063, 1306
DdeI CTNAG 6 cut(s) 126, 212, 320, 789, 1083, 1338
DpnI GATC 6 cut(s) 660, 861, 1037, 1361, 1434, 1551
DpnII GATC 6 cut(s) 658, 859, 1035, 1359, 1432, 1549
DraI TTTAAA 1 cut(s) 1297
Eam1104I CTCTTC 3 cut(s) 1181, 1451, 1596
EarI CTCTTC 3 cut(s) 1181, 1451, 1596
EciI GGCGGA 1 cut(s) 567
Eco130I CCWWGG 2 cut(s) 795, 1406
Eco147I AGGCCT 1 cut(s) 354
Eco24I GRGCYC 1 cut(s) 531
Eco32I GATATC 2 cut(s) 51, 430
Eco47I GGWCC 1 cut(s) 679
Eco57I CTGAAG 2 cut(s) 1157, 1549
Eco81I CCTNAGG 2 cut(s) 212, 320
EcoO109I RGGNCCY 1 cut(s) 679
EcoRII CCWGG 1 cut(s) 933
EcoRV GATATC 2 cut(s) 51, 430
EcoT14I CCWWGG 2 cut(s) 795, 1406
EcoT38I GRGCYC 1 cut(s) 531
ErhI CCWWGG 2 cut(s) 795, 1406
FalI AAGNNNNNCTT 4 cut(s) 1106, 1138, 1499, 1531
FauNDI CATATG 2 cut(s) 574, 1417
FblI GTMKAC 2 cut(s) 173, 396
Fnu4HI GCNGC 4 cut(s) 285, 444, 606, 1196
FokI GGATG 3 cut(s) 713, 1329, 1568
FriOI GRGCYC 1 cut(s) 531
Fsp4HI GCNGC 4 cut(s) 285, 444, 606, 1196
FspBI CTAG 2 cut(s) 542, 1612
GluI GCNGC 4 cut(s) 285, 444, 606, 1196
GsuI CTGGAG 2 cut(s) 585, 828
HaeIII GGCC 6 cut(s) 339, 354, 600, 692, 938, 1385
HapII CCGG 1 cut(s) 525
Hin1I GRCGYC 1 cut(s) 639
HincII GTYRAC 1 cut(s) 637
HindII GTYRAC 1 cut(s) 637
HindIII AAGCTT 6 cut(s) 305, 407, 715, 985, 1367, 1468
HinfI GANTC 7 cut(s) 76, 194, 269, 451, 538, 723, 1259
HpaII CCGG 1 cut(s) 525
HphI GGTGA 1 cut(s) 485
Hpy166II GTNNAC 5 cut(s) 174, 397, 481, 637, 931
Hpy188I TCNGA 9 cut(s) 48, 75, 129, 329, 698, 872, 1138, 1215, 1258
Hpy188III TCNNGA 4 cut(s) 1147, 1160, 1363, 1436
Hpy8I GTNNAC 5 cut(s) 174, 397, 481, 637, 931
HpyAV CCTTC 4 cut(s) 53, 93, 237, 344
HpyCH4III ACNGT 6 cut(s) 187, 769, 775, 919, 928, 1376
HpyCH4IV ACGT 3 cut(s) 170, 639, 1308
HpyCH4V TGCA 9 cut(s) 203, 265, 494, 534, 572, 782, 979, 1198, 1265
HpyF10VI GCNNNNNNNGC 5 cut(s) 62, 614, 623, 1177, 1467
HpyF3I CTNAG 6 cut(s) 126, 212, 320, 789, 1083, 1338
HpySE526I ACGT 3 cut(s) 170, 639, 1308
Hsp92I GRCGYC 1 cut(s) 639
KpnI GGTACC 2 cut(s) 227, 1066
Kzo9I GATC 6 cut(s) 658, 859, 1035, 1359, 1432, 1549
LguI GCTCTTC 1 cut(s) 1451
LmnI GCTCC 3 cut(s) 710, 822, 847
Lsp1109I GCAGC 3 cut(s) 271, 592, 1182
LweI GCATC 2 cut(s) 613, 1590
MaeI CTAG 2 cut(s) 542, 1612
MaeII ACGT 3 cut(s) 170, 639, 1308
MaeIII GTNAC 6 cut(s) 769, 919, 1003, 1376, 1393, 1493
MalI GATC 6 cut(s) 660, 861, 1037, 1361, 1434, 1551
MboI GATC 6 cut(s) 658, 859, 1035, 1359, 1432, 1549
MboII GAAGA 7 cut(s) 18, 189, 751, 1198, 1468, 1555, 1583
MflI RGATCY 2 cut(s) 859, 1432
MhlI GDGCHC 2 cut(s) 67, 531
MlyI GAGTC 3 cut(s) 70, 547, 1268
MmeI TCCRAC 2 cut(s) 1013, 1103
MroXI GAANNNNTTC 2 cut(s) 986, 1121
MseI TTAA 5 cut(s) 101, 1296, 1449, 1518, 1536
MslI CAYNNNNRTG 2 cut(s) 260, 345
MspI CCGG 1 cut(s) 525
MspR9I CCNGG 2 cut(s) 526, 935
MvaI CCWGG 1 cut(s) 935
MwoI GCNNNNNNNGC 5 cut(s) 62, 614, 623, 1177, 1467
NciI CCSGG 1 cut(s) 526
NdeI CATATG 2 cut(s) 574, 1417
NdeII GATC 6 cut(s) 658, 859, 1035, 1359, 1432, 1549
NlaIV GGNNCC 8 cut(s) 225, 463, 580, 753, 808, 898, 1064, 1386
NmuCI GTSAC 3 cut(s) 769, 919, 1003
OliI CACNNNNGTG 1 cut(s) 260
PceI AGGCCT 1 cut(s) 354
PciSI GCTCTTC 1 cut(s) 1451
PdmI GAANNNNTTC 2 cut(s) 986, 1121
PfeI GAWTC 4 cut(s) 194, 269, 451, 723
PflFI GACNNNGTC 1 cut(s) 1142
PflMI CCANNNNNTGG 1 cut(s) 1166
PkrI GCNGC 4 cut(s) 286, 445, 607, 1197
PleI GAGTC 3 cut(s) 70, 546, 1267
PpsI GAGTC 3 cut(s) 70, 546, 1267
Ppu21I YACGTR 1 cut(s) 1309
PpuMI RGGWCCY 1 cut(s) 679
PsiI TTATAA 1 cut(s) 1428
Psp5II RGGWCCY 1 cut(s) 679
Psp6I CCWGG 1 cut(s) 933
PspGI CCWGG 1 cut(s) 933
PspN4I GGNNCC 8 cut(s) 225, 463, 580, 753, 808, 898, 1064, 1386
PspPI GGNCC 4 cut(s) 679, 690, 937, 1384
PspPPI RGGWCCY 1 cut(s) 679
PstNI CAGNNNCTG 3 cut(s) 767, 1166, 1262
PsuI RGATCY 2 cut(s) 859, 1432
PsyI GACNNNGTC 1 cut(s) 1142
RsaI GTAC 4 cut(s) 225, 1021, 1064, 1307
RsaNI GTAC 4 cut(s) 224, 1020, 1063, 1306
RseI CAYNNNNRTG 2 cut(s) 260, 345
SapI GCTCTTC 1 cut(s) 1451
SaqAI TTAA 5 cut(s) 101, 1296, 1449, 1518, 1536
SatI GCNGC 4 cut(s) 285, 444, 606, 1196
Sau3AI GATC 6 cut(s) 658, 859, 1035, 1359, 1432, 1549
Sau96I GGNCC 4 cut(s) 679, 690, 937, 1384
SchI GAGTC 3 cut(s) 70, 547, 1268
ScrFI CCNGG 2 cut(s) 526, 935
SduI GDGCHC 2 cut(s) 67, 531
SfaNI GCATC 2 cut(s) 613, 1590
SfcI CTRYAG 1 cut(s) 484
SinI GGWCC 1 cut(s) 679
SmiMI CAYNNNNRTG 2 cut(s) 260, 345
SseBI AGGCCT 1 cut(s) 354
SsiI CCGC 2 cut(s) 444, 552
SspI AATATT 1 cut(s) 122
SspMI CTAG 2 cut(s) 542, 1612
StuI AGGCCT 1 cut(s) 354
StyD4I CCNGG 2 cut(s) 524, 933
StyI CCWWGG 2 cut(s) 795, 1406
TaaI ACNGT 6 cut(s) 187, 769, 775, 919, 928, 1376
TaiI ACGT 3 cut(s) 173, 642, 1311
TaqI TCGA 3 cut(s) 192, 628, 661
TaqII GACCGA 1 cut(s) 402
TatI WGTACW 1 cut(s) 1019
TauI GCSGC 1 cut(s) 446
TfiI GAWTC 4 cut(s) 194, 269, 451, 723
Tru1I TTAA 5 cut(s) 101, 1296, 1449, 1518, 1536
Tru9I TTAA 5 cut(s) 101, 1296, 1449, 1518, 1536
TscAI CASTG 1 cut(s) 267
TseFI GTSAC 3 cut(s) 769, 919, 1003
TseI GCWGC 3 cut(s) 284, 605, 1195
Tsp45I GTSAC 3 cut(s) 769, 919, 1003
TspDTI ATGAA 9 cut(s) 18, 48, 363, 376, 868, 959, 1042, 1367, 1587
TspGWI ACGGA 1 cut(s) 124
TspRI CASTG 1 cut(s) 267
Tth111I GACNNNGTC 1 cut(s) 1142
Van91I CCANNNNNTGG 1 cut(s) 1166
VpaK11BI GGWCC 1 cut(s) 679
XapI RAATTY 1 cut(s) 1299
XmiI GTMKAC 2 cut(s) 173, 396
XmnI GAANNNNTTC 2 cut(s) 986, 1121
XspI CTAG 2 cut(s) 542, 1612
ZraI GACGTC 1 cut(s) 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.