Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0003564

Physical Location & Seq

Genomic Coordinates Reverse (-)

81988960 .. 81991147

Gene Structure 2188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00059890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGTGCTTTCAAACTATTCTATGTTTCCACTATTTCTTTTTCTTCTCCTCCTATCGTCTTCTTTCGCACATCCTTCATCTTCGAAAGAAGACATTTTTATCCAGTGCCTCTCGTCTCATTCCACGGTTTCTATTTCTTTCTCTAGCACCATTTTCACCCCGAACAACTCTTCCTTCACCACCGTCCTAAATTCAACTGCGGAAAACCTCAGATGCGTAGTCCCTTCCATGCCAAAGCCAGAGTTAATTTTCAGACCAACGCATGAATCCCATGTTCAAGCTGCTGTTATTTGCTCAAAACAGCTGGGAATACATCTCAGGGTCCGAAGTGGAGGCCATGACTACGAAGGCCTCTCCTATGCCTCCCAAATTGAAACACCTTTCATCGTTGTAGACCTTGCCAAGCTTCGATCAGTTAACGTTGATATCCAACACAACAGTGCATGGATTCAAGCCGGTGCCACCATTGGCGAAGTTTACTACAGAATTGCTGAGAAAAGCACAACACATGGCTTTCCTGCCGGTCTTTGCACAAGCTTAGGCGTGGGGGGACATATAACCGGAGGTGCGTATGGTTCGATGATGAGAAAATATGGCCTTGGTGCTGATAACGTTGTCGATGCTCGAATAATTGATGTCAATGGCAGAATTCTTGACCGAAAGACCATGGGTGAAGATCTTTTTTGGGCAATCAGAGGTGGTGGAGGAGCAAGCTTTGGAATCATCATGTGGTGGAAGATAAAGTTGGTTCCTGTTCCATCAACTGTAACAGTTTTCACGGTTGCCAGGACCCTGGAACAAGGTGGCACAAAGCTCCTACATAGGTGGCAACAAGTGGCTGCTGCTGAGCTTGATGAAGATCTCTTTATTAGAGCTATCATACAACTAACAAGTGACAGCAAAAGTGGCAAGAGAACTGTCACGACTCTTTACCAAGCTCTGTTCCTCGGAGGAGTTGAAAAACTCCTCCATGTTATGCAAACAGGCTTCCCGGAACTGGGTTTGACCCAAAAAGATTGTACTGAAACCAGTTGGATCAAATCCGTGTTGTACATTGCAAACTACCCGAGTGGAACTCAACCCGAGATTCTGCTTCAAGGAAAATCCACAACCAAGAATTACTTCAAAGCCAAATCAGACTATGTCAAAGATCCAATCCCTGAAACCGGGCTTGAGGGACTGTGGAAAAAGTTGATGGAAGAAACCAATCCTCTGTTGATTTGGACACCATATGGGGGAATGATGAGCAAGATTTCGGAGTCCGAGACACCTTTCCCTCACAGAAAAGGAGTGCTCTTCAAGATTCAGTACCTGACTGGGTGGCAAGCTGCAAATCAAGAGGCAAAGCACATGGATTGGATTAGGAAGCTTTACAACTACATGGCTCCTTATGTTACAAAATCCCCAAGGCAAGCATATGTGAATTATAGGGATCTTGATTTGGGGATAAACAAAAAAAGGAACACTAGCATCACTGAAGCAAGTGCTTGGGGTACCAGGTATTTCAAGGACAACTTCATCAGACTGATAAAAATTAAGACCAAAGTGGATCCGGAAAACTTCTTCAGGCATGAACAGAGCATCCCACCTCTTCCACCCAAACAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005829 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006979 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0016020 GO:0016491 GO:0016614 GO:0016899 GO:0030054 GO:0030312 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0055114 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

536

Amino Acids

60.02

Weight (kDa)

9.16

Isoelectric Point (pI)

34.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	80 - 218	1.8e-25	FAD binding domain
BBE	PF08031	472 - 529	1.7e-20	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30760 AT1G30760 AT2G34790 AT5G44390 AT5G44400
fragaria_vesca	FvH4_3g10920
malus_domestica	MD05G1268400.v1.1 MD05G1268500.v1.1 MD10G1244500.v1.1
prunus_persica	Prupe.4G096300_v2.0.a1 Prupe.4G096400_v2.0.a1
pyrus_communis	pycom05g25130 pycom05g25140 pycom10g20500
rosa_chinensis	RchiOBHm_Chr5g0017561 RchiOBHm_Chr5g0017591 RchiOBHm_Chr5g0017601 RchiOBHm_Chr5g0017621 RchiOBHm_Chr5g0017641
rosa_laevigata	RLG00000032298 RLG00000032301 RLG00000032302
rosa_multiflora	Rmu_sc0000346.1_g000021 Rmu_sc0000346.1_g000022 Rmu_sc0002565.1_g000007 Rmu_sc0003415.1_g000020
rosa_roxburghii	Rroxscaffold_1G00059870 Rroxscaffold_1G00059880 Rroxscaffold_1G00059890
rosa_rugosa	Rorug05G0036900 Rorug05G0037000 Rorug05G0037100
rosa_wichuraiana	Rw5G011310 Rw5G011320 Rw5G011330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1493
AccB1I	GGYRCC	2 cut(s)	458, 1493
AccI	GTMKAC	1 cut(s)	393
AccIII	TCCGGA	1 cut(s)	1552
AciI	CCGC	1 cut(s)	200
AclI	AACGTT	2 cut(s)	420, 612
AclWI	GGATC	5 cut(s)	1043, 1145, 1440, 1544, 1557
AcsI	RAATTY	2 cut(s)	190, 648
AcuI	CTGAAG	2 cut(s)	1497, 1549
AfaI	GTAC	4 cut(s)	1021, 1052, 1310, 1495
AfiI	CCNNNNNNNGG	4 cut(s)	997, 998, 1166, 1235
AjnI	CCWGG	3 cut(s)	785, 792, 1496
AjuI	GAANNNNNNNTTGG	4 cut(s)	728, 760, 1106, 1138
AleI	CACNNNNGTG	1 cut(s)	438
AloI	GAACNNNNNNTCC	4 cut(s)	155, 187, 1566, 1598
Alw21I	GWGCWC	1 cut(s)	1296
Alw26I	GTCTC	2 cut(s)	120, 1259
AlwI	GGATC	5 cut(s)	1043, 1145, 1440, 1544, 1557
AlwNI	CAGNNNCTG	1 cut(s)	1312
Ama87I	CYCGRG	2 cut(s)	1066, 1082
Aor13HI	TCCGGA	1 cut(s)	1552
AoxI	GGCC	3 cut(s)	334, 349, 595
ApeKI	GCWGC	4 cut(s)	281, 839, 842, 1328
ApoI	RAATTY	2 cut(s)	190, 648
Asp700I	GAANNNNTTC	1 cut(s)	1121
Asp718I	GGTACC	1 cut(s)	1493
AspS9I	GGNCC	2 cut(s)	322, 789
AsuC2I	CCSGG	2 cut(s)	992, 1168
AsuHPI	GGTGA	3 cut(s)	148, 169, 683
AsuII	TTCGAA	1 cut(s)	83
AvaI	CYCGRG	2 cut(s)	1066, 1082
AvaII	GGWCC	2 cut(s)	322, 789
BamHI	GGATCC	1 cut(s)	1549
BanI	GGYRCC	2 cut(s)	458, 1493
BbsI	GAAGAC	2 cut(s)	51, 96
Bbv12I	GWGCWC	1 cut(s)	1296
BbvI	GCAGC	4 cut(s)	268, 826, 829, 1315
BccI	CCATC	2 cut(s)	766, 1189
BciT130I	CCWGG	3 cut(s)	787, 794, 1498
BcnI	CCSGG	2 cut(s)	992, 1168
BcoDI	GTCTC	2 cut(s)	120, 1259
BfaI	CTAG	2 cut(s)	144, 1467
BfmI	CTRYAG	1 cut(s)	481
BglII	AGATCT	2 cut(s)	676, 859
BisI	GCNGC	4 cut(s)	282, 840, 843, 1329
BlpI	GCTNAGC	1 cut(s)	846
BlsI	GCNGC	4 cut(s)	283, 841, 844, 1330
Bme1390I	CCNGG	5 cut(s)	787, 794, 992, 1168, 1498
Bme18I	GGWCC	2 cut(s)	322, 789
BmeT110I	CYCGRG	2 cut(s)	1066, 1082
BmgT120I	GGNCC	2 cut(s)	322, 789
BmiI	GGNNCC	7 cut(s)	323, 460, 750, 791, 1386, 1495, 1551
BmrFI	CCNGG	5 cut(s)	787, 794, 992, 1168, 1498
BmrI	ACTGGG	2 cut(s)	1007, 1326
BmsI	GCATC	4 cut(s)	203, 610, 1479, 1590
BmuI	ACTGGG	2 cut(s)	1007, 1326
BpiI	GAAGAC	2 cut(s)	51, 96
BplI	GAGNNNNNCTC	2 cut(s)	1060, 1092
Bpu10I	CCTNAGC	1 cut(s)	538
Bpu1102I	GCTNAGC	1 cut(s)	846
Bpu14I	TTCGAA	1 cut(s)	83
BpuEI	CTTGAG	1 cut(s)	1193
BpuMI	CCSGG	2 cut(s)	992, 1168
BsaBI	GATNNNNATC	1 cut(s)	858
BsaJI	CCNNGG	6 cut(s)	123, 598, 666, 792, 946, 1406
BsaWI	WCCGGW	2 cut(s)	560, 1552
Bsc4I	CCNNNNNNNGG	4 cut(s)	997, 998, 1166, 1235
Bse118I	RCCGGY	2 cut(s)	455, 521
Bse1I	ACTGG	4 cut(s)	103, 1002, 1029, 1321
Bse3DI	GCAATG	1 cut(s)	1053
Bse8I	GATNNNNATC	1 cut(s)	858
BseAI	TCCGGA	1 cut(s)	1552
BseBI	CCWGG	3 cut(s)	787, 794, 1498
BseDI	CCNNGG	6 cut(s)	123, 598, 666, 792, 946, 1406
BseGI	GGATG	2 cut(s)	70, 1581
BseJI	GATNNNNATC	1 cut(s)	858
BseLI	CCNNNNNNNGG	4 cut(s)	997, 998, 1166, 1235
BseMI	GCAATG	1 cut(s)	1053
BseMII	CTCAG	4 cut(s)	223, 331, 483, 837
BseNI	ACTGG	4 cut(s)	103, 1002, 1029, 1321
BseRI	GAGGAG	4 cut(s)	38, 720, 956, 966
BseXI	GCAGC	4 cut(s)	268, 826, 829, 1315
BseYI	CCCAGC	1 cut(s)	304
BshFI	GGCC	3 cut(s)	336, 351, 597
BshNI	GGYRCC	2 cut(s)	458, 1493
BsiHKAI	GWGCWC	1 cut(s)	1296
BsiHKCI	CYCGRG	2 cut(s)	1066, 1082
BsiSI	CCGG	6 cut(s)	456, 522, 561, 992, 1167, 1553
BslFI	GGGAC	3 cut(s)	206, 564, 1191
BslI	CCNNNNNNNGG	4 cut(s)	997, 998, 1166, 1235
BsmAI	GTCTC	2 cut(s)	120, 1259
BsmBI	CGTCTC	1 cut(s)	120
BsmFI	GGGAC	3 cut(s)	206, 564, 1191
BsnI	GGCC	3 cut(s)	336, 351, 597
BsoBI	CYCGRG	2 cut(s)	1066, 1082
Bsp119I	TTCGAA	1 cut(s)	83
Bsp1286I	GDGCHC	1 cut(s)	1296
Bsp13I	TCCGGA	1 cut(s)	1552
Bsp1407I	TGTACA	1 cut(s)	1050
Bsp143I	GATC	7 cut(s)	410, 676, 859, 1035, 1150, 1432, 1549
Bsp1720I	GCTNAGC	1 cut(s)	846
Bsp19I	CCATGG	1 cut(s)	666
BspACI	CCGC	1 cut(s)	200
BspANI	GGCC	3 cut(s)	336, 351, 597
BspCNI	CTCAG	4 cut(s)	222, 330, 484, 838
BspEI	TCCGGA	1 cut(s)	1552
BspLI	GGNNCC	7 cut(s)	323, 460, 750, 791, 1386, 1495, 1551
BspPI	GGATC	5 cut(s)	1043, 1145, 1440, 1544, 1557
BspQI	GCTCTTC	1 cut(s)	1301
BspT104I	TTCGAA	1 cut(s)	83
BspT107I	GGYRCC	2 cut(s)	458, 1493
BsrDI	GCAATG	1 cut(s)	1053
BsrFI	RCCGGY	2 cut(s)	455, 521
BsrGI	TGTACA	1 cut(s)	1050
BsrI	ACTGG	4 cut(s)	103, 1002, 1029, 1321
BssAI	RCCGGY	2 cut(s)	455, 521
BssECI	CCNNGG	6 cut(s)	123, 598, 666, 792, 946, 1406
BssMI	GATC	7 cut(s)	410, 676, 859, 1035, 1150, 1432, 1549
BssT1I	CCWWGG	3 cut(s)	598, 666, 1406
Bst2UI	CCWGG	3 cut(s)	787, 794, 1498
Bst4CI	ACNGT	8 cut(s)	127, 184, 440, 766, 772, 781, 919, 1182
Bst6I	CTCTTC	3 cut(s)	175, 1301, 1596
BstAUI	TGTACA	1 cut(s)	1050
BstBI	TTCGAA	1 cut(s)	83
BstC8I	GCNNGC	3 cut(s)	712, 1326, 1413
BstDEI	CTNAG	5 cut(s)	209, 317, 492, 538, 846
BstDSI	CCRYGG	2 cut(s)	123, 666
BstF5I	GGATG	2 cut(s)	70, 1581
BstKTI	GATC	7 cut(s)	413, 679, 862, 1038, 1153, 1435, 1552
BstMAI	GTCTC	2 cut(s)	120, 1259
BstMBI	GATC	7 cut(s)	410, 676, 859, 1035, 1150, 1432, 1549
BstMWI	GCNNNNNNNGC	1 cut(s)	906
BstNI	CCWGG	3 cut(s)	787, 794, 1498
BstSCI	CCNGG	5 cut(s)	785, 792, 990, 1166, 1496
BstSFI	CTRYAG	1 cut(s)	481
BstV1I	GCAGC	4 cut(s)	268, 826, 829, 1315
BstV2I	GAAGAC	2 cut(s)	51, 96
BstX2I	RGATCY	5 cut(s)	676, 859, 1150, 1432, 1549
BstXI	CCANNNNNNTGG	1 cut(s)	793
BstYI	RGATCY	5 cut(s)	676, 859, 1150, 1432, 1549
BsuRI	GGCC	3 cut(s)	336, 351, 597
BtgI	CCRYGG	2 cut(s)	123, 666
BtsCI	GGATG	2 cut(s)	70, 1581
BtsIMutI	CAGTG	3 cut(s)	110, 445, 1473
Cac8I	GCNNGC	3 cut(s)	712, 1326, 1413
CaiI	CAGNNNCTG	1 cut(s)	1312
Cfr10I	RCCGGY	2 cut(s)	455, 521
Cfr13I	GGNCC	2 cut(s)	322, 789
CsiI	ACCWGGT	1 cut(s)	1496
Csp6I	GTAC	4 cut(s)	1020, 1051, 1309, 1494
CviQI	GTAC	4 cut(s)	1020, 1051, 1309, 1494
DdeI	CTNAG	5 cut(s)	209, 317, 492, 538, 846
DpnI	GATC	7 cut(s)	412, 678, 861, 1037, 1152, 1434, 1551
DpnII	GATC	7 cut(s)	410, 676, 859, 1035, 1150, 1432, 1549
Eam1104I	CTCTTC	3 cut(s)	175, 1301, 1596
EarI	CTCTTC	3 cut(s)	175, 1301, 1596
Eco130I	CCWWGG	3 cut(s)	598, 666, 1406
Eco147I	AGGCCT	1 cut(s)	351
Eco32I	GATATC	1 cut(s)	427
Eco47I	GGWCC	2 cut(s)	322, 789
Eco57I	CTGAAG	2 cut(s)	1497, 1549
Eco88I	CYCGRG	2 cut(s)	1066, 1082
EcoO109I	RGGNCCY	1 cut(s)	789
EcoRI	GAATTC	1 cut(s)	648
EcoRII	CCWGG	3 cut(s)	785, 792, 1496
EcoRV	GATATC	1 cut(s)	427
EcoT14I	CCWWGG	3 cut(s)	598, 666, 1406
ErhI	CCWWGG	3 cut(s)	598, 666, 1406
Esp3I	CGTCTC	1 cut(s)	120
FalI	AAGNNNNNCTT	4 cut(s)	1106, 1138, 1499, 1531
FaqI	GGGAC	3 cut(s)	206, 564, 1191
FauNDI	CATATG	2 cut(s)	1231, 1417
FblI	GTMKAC	1 cut(s)	393
Fnu4HI	GCNGC	4 cut(s)	282, 840, 843, 1329
FokI	GGATG	2 cut(s)	57, 1568
Fsp4HI	GCNGC	4 cut(s)	282, 840, 843, 1329
FspBI	CTAG	2 cut(s)	144, 1467
GluI	GCNGC	4 cut(s)	282, 840, 843, 1329
GsaI	CCCAGC	1 cut(s)	308
HaeIII	GGCC	3 cut(s)	336, 351, 597
HapII	CCGG	6 cut(s)	456, 522, 561, 992, 1167, 1553
HincII	GTYRAC	1 cut(s)	418
HindII	GTYRAC	1 cut(s)	418
HindIII	AAGCTT	4 cut(s)	404, 535, 712, 1367
HinfI	GANTC	7 cut(s)	266, 448, 720, 925, 1087, 1259, 1303
HpaI	GTTAAC	1 cut(s)	418
HpaII	CCGG	6 cut(s)	456, 522, 561, 992, 1167, 1553
HphI	GGTGA	3 cut(s)	148, 169, 683
Hpy166II	GTNNAC	3 cut(s)	394, 418, 478
Hpy188I	TCNGA	9 cut(s)	212, 254, 326, 695, 950, 1138, 1258, 1264, 1523
Hpy188III	TCNNGA	6 cut(s)	653, 922, 1300, 1337, 1436, 1553
Hpy8I	GTNNAC	3 cut(s)	394, 418, 478
HpyAV	CCTTC	4 cut(s)	84, 184, 234, 341
HpyCH4III	ACNGT	8 cut(s)	127, 184, 440, 766, 772, 781, 919, 1182
HpyCH4IV	ACGT	2 cut(s)	420, 612
HpyCH4V	TGCA	5 cut(s)	443, 531, 979, 1058, 1331
HpyF10VI	GCNNNNNNNGC	1 cut(s)	906
HpyF3I	CTNAG	5 cut(s)	209, 317, 492, 538, 846
HpySE526I	ACGT	2 cut(s)	420, 612
Kpn2I	TCCGGA	1 cut(s)	1552
KpnI	GGTACC	1 cut(s)	1497
KspAI	GTTAAC	1 cut(s)	418
Kzo9I	GATC	7 cut(s)	410, 676, 859, 1035, 1150, 1432, 1549
LguI	GCTCTTC	1 cut(s)	1301
LmnI	GCTCC	3 cut(s)	707, 819, 1390
Lsp1109I	GCAGC	4 cut(s)	268, 826, 829, 1315
LweI	GCATC	4 cut(s)	203, 610, 1479, 1590
MabI	ACCWGGT	1 cut(s)	1496
MaeI	CTAG	2 cut(s)	144, 1467
MaeII	ACGT	2 cut(s)	420, 612
MaeIII	GTNAC	4 cut(s)	766, 893, 919, 1393
MalI	GATC	7 cut(s)	412, 678, 861, 1037, 1152, 1434, 1551
MboI	GATC	7 cut(s)	410, 676, 859, 1035, 1150, 1432, 1549
MflI	RGATCY	5 cut(s)	676, 859, 1150, 1432, 1549
MhlI	GDGCHC	1 cut(s)	1296
MluCI	AATT	9 cut(s)	190, 246, 369, 486, 630, 648, 1117, 1423, 1533
MlyI	GAGTC	2 cut(s)	919, 1268
MmeI	TCCRAC	2 cut(s)	454, 1013
MroI	TCCGGA	1 cut(s)	1552
MroXI	GAANNNNTTC	1 cut(s)	1121
MseI	TTAA	3 cut(s)	245, 417, 1536
MslI	CAYNNNNRTG	1 cut(s)	438
MspA1I	CMGCKG	1 cut(s)	304
MspI	CCGG	6 cut(s)	456, 522, 561, 992, 1167, 1553
MspR9I	CCNGG	5 cut(s)	787, 794, 992, 1168, 1498
MvaI	CCWGG	3 cut(s)	787, 794, 1498
MwoI	GCNNNNNNNGC	1 cut(s)	906
NciI	CCSGG	2 cut(s)	992, 1168
NcoI	CCATGG	1 cut(s)	666
NdeI	CATATG	2 cut(s)	1231, 1417
NdeII	GATC	7 cut(s)	410, 676, 859, 1035, 1150, 1432, 1549
NlaIV	GGNNCC	7 cut(s)	323, 460, 750, 791, 1386, 1495, 1551
NmuCI	GTSAC	2 cut(s)	893, 919
NspV	TTCGAA	1 cut(s)	83
OliI	CACNNNNGTG	1 cut(s)	438
PceI	AGGCCT	1 cut(s)	351
PciSI	GCTCTTC	1 cut(s)	1301
PdmI	GAANNNNTTC	1 cut(s)	1121
PfeI	GAWTC	5 cut(s)	266, 448, 720, 1087, 1303
PflFI	GACNNNGTC	1 cut(s)	1142
PfoI	TCCNGGA	1 cut(s)	990
PkrI	GCNGC	4 cut(s)	283, 841, 844, 1330
PleI	GAGTC	2 cut(s)	919, 1267
PpsI	GAGTC	2 cut(s)	919, 1267
PpuMI	RGGWCCY	1 cut(s)	789
Psp1406I	AACGTT	2 cut(s)	420, 612
Psp5II	RGGWCCY	1 cut(s)	789
Psp6I	CCWGG	3 cut(s)	785, 792, 1496
PspFI	CCCAGC	1 cut(s)	304
PspGI	CCWGG	3 cut(s)	785, 792, 1496
PspN4I	GGNNCC	7 cut(s)	323, 460, 750, 791, 1386, 1495, 1551
PspPI	GGNCC	2 cut(s)	322, 789
PspPPI	RGGWCCY	1 cut(s)	789
PstNI	CAGNNNCTG	1 cut(s)	1312
PsuI	RGATCY	5 cut(s)	676, 859, 1150, 1432, 1549
PsyI	GACNNNGTC	1 cut(s)	1142
PvuII	CAGCTG	1 cut(s)	304
RsaI	GTAC	4 cut(s)	1021, 1052, 1310, 1495
RsaNI	GTAC	4 cut(s)	1020, 1051, 1309, 1494
RseI	CAYNNNNRTG	1 cut(s)	438
SapI	GCTCTTC	1 cut(s)	1301
SaqAI	TTAA	3 cut(s)	245, 417, 1536
SatI	GCNGC	4 cut(s)	282, 840, 843, 1329
Sau3AI	GATC	7 cut(s)	410, 676, 859, 1035, 1150, 1432, 1549
Sau96I	GGNCC	2 cut(s)	322, 789
SchI	GAGTC	2 cut(s)	919, 1268
ScrFI	CCNGG	5 cut(s)	787, 794, 992, 1168, 1498
SduI	GDGCHC	1 cut(s)	1296
SexAI	ACCWGGT	1 cut(s)	1496
SfaNI	GCATC	4 cut(s)	203, 610, 1479, 1590
SfcI	CTRYAG	1 cut(s)	481
SfuI	TTCGAA	1 cut(s)	83
SinI	GGWCC	2 cut(s)	322, 789
SmiMI	CAYNNNNRTG	1 cut(s)	438
SmlI	CTYRAG	1 cut(s)	1172
SmoI	CTYRAG	1 cut(s)	1172
Sse9I	AATT	9 cut(s)	190, 246, 369, 486, 630, 648, 1117, 1423, 1533
SseBI	AGGCCT	1 cut(s)	351
SsiI	CCGC	1 cut(s)	200
SspMI	CTAG	2 cut(s)	144, 1467
StuI	AGGCCT	1 cut(s)	351
StyD4I	CCNGG	5 cut(s)	785, 792, 990, 1166, 1496
StyI	CCWWGG	3 cut(s)	598, 666, 1406
TaaI	ACNGT	8 cut(s)	127, 184, 440, 766, 772, 781, 919, 1182
TaiI	ACGT	2 cut(s)	423, 615
TaqI	TCGA	5 cut(s)	83, 409, 578, 618, 625
TaqII	GACCGA	1 cut(s)	672
TasI	AATT	9 cut(s)	190, 246, 369, 486, 630, 648, 1117, 1423, 1533
TatI	WGTACW	2 cut(s)	1019, 1050
TfiI	GAWTC	5 cut(s)	266, 448, 720, 1087, 1303
Tru1I	TTAA	3 cut(s)	245, 417, 1536
Tru9I	TTAA	3 cut(s)	245, 417, 1536
TscAI	CASTG	3 cut(s)	110, 445, 1480
TseFI	GTSAC	2 cut(s)	893, 919
TseI	GCWGC	4 cut(s)	281, 839, 842, 1328
Tsp45I	GTSAC	2 cut(s)	893, 919
TspDTI	ATGAA	6 cut(s)	66, 279, 373, 870, 1507, 1587
TspGWI	ACGGA	1 cut(s)	1033
TspRI	CASTG	3 cut(s)	110, 445, 1480
Tth111I	GACNNNGTC	1 cut(s)	1142
VpaK11BI	GGWCC	2 cut(s)	322, 789
XapI	RAATTY	2 cut(s)	190, 648
XmiI	GTMKAC	1 cut(s)	393
XmnI	GAANNNNTTC	1 cut(s)	1121
XspI	CTAG	2 cut(s)	144, 1467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.