ATP-dependent DNA helicase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G05740 AT3G05740 |
| fragaria_vesca | FvH4_6g07200 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210 |
| malus_domestica | MD04G1195500.v1.1 MD12G1207600.v1.1 MD12G1207700.v1.1 MD12G1207800.v1.1 |
| prunus_persica | Prupe.6G315200_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1 |
| pyrus_communis | pycom04g17270 pycom12g19520 pycom12g19530 |
| rosa_chinensis | RchiOBHm_Chr3g0456831 RchiOBHm_Chr3g0456841 |
| rosa_laevigata | RLG00000025275 |
| rosa_multiflora | Rmu_co8434835.1_g000001 Rmu_sc0000133.1_g000020 |
| rosa_roxburghii | Rroxscaffold_6G00422450 Rroxscaffold_6G00422460 |
| rosa_rugosa | Rorug03G0016100 Rorug03G0016200 Rorug03G0016300.1 |
| rosa_samantha | Rh3AG076400 Rh3AG076600 Rh3BG078200 Rh3BG078400 Rh3CG078000 Rh3CG078200 Rh3DG080100 Rh3DG080200 |
| rosa_wichuraiana | Rw3G006560 Rw3G006570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 980 |
| AccB1I | GGYRCC | 1 cut(s) | 1384 |
| AccII | CGCG | 1 cut(s) | 421 |
| AciI | CCGC | 3 cut(s) | 170, 973, 1238 |
| AclWI | GGATC | 3 cut(s) | 15, 102, 1287 |
| AcoI | YGGCCR | 1 cut(s) | 1043 |
| AcsI | RAATTY | 3 cut(s) | 244, 584, 1158 |
| AcuI | CTGAAG | 2 cut(s) | 252, 1199 |
| AdeI | CACNNNGTG | 1 cut(s) | 1018 |
| AfaI | GTAC | 3 cut(s) | 1143, 1595, 1748 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 692, 1381 |
| AflII | CTTAAG | 2 cut(s) | 803, 1070 |
| AflIII | ACRYGT | 2 cut(s) | 419, 449 |
| AgsI | TTSAA | 6 cut(s) | 321, 492, 584, 1207, 1276, 1574 |
| AjiI | CACGTC | 1 cut(s) | 1489 |
| AjnI | CCWGG | 1 cut(s) | 1163 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 74, 106 |
| Alw21I | GWGCWC | 1 cut(s) | 1713 |
| Alw26I | GTCTC | 3 cut(s) | 410, 947, 1307 |
| AlwI | GGATC | 3 cut(s) | 15, 102, 1287 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 863 |
| AoxI | GGCC | 2 cut(s) | 623, 1043 |
| ApeKI | GCWGC | 5 cut(s) | 631, 857, 860, 1258, 1696 |
| ApoI | RAATTY | 3 cut(s) | 244, 584, 1158 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1478, 1510 |
| AseI | ATTAAT | 1 cut(s) | 38 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 511, 1607 |
| AspLEI | GCGC | 2 cut(s) | 796, 1579 |
| AspS9I | GGNCC | 2 cut(s) | 535, 624 |
| AsuC2I | CCSGG | 1 cut(s) | 1381 |
| AsuHPI | GGTGA | 4 cut(s) | 128, 610, 1228, 1369 |
| AvaII | GGWCC | 1 cut(s) | 535 |
| BaeGI | GKGCMC | 1 cut(s) | 1035 |
| BanI | GGYRCC | 1 cut(s) | 1384 |
| BanII | GRGCYC | 2 cut(s) | 1171, 1713 |
| BbsI | GAAGAC | 2 cut(s) | 1367, 1735 |
| Bbv12I | GWGCWC | 1 cut(s) | 1713 |
| BbvI | GCAGC | 5 cut(s) | 643, 869, 872, 1245, 1708 |
| BccI | CCATC | 3 cut(s) | 116, 1093, 1462 |
| BceAI | ACGGC | 1 cut(s) | 1131 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 59, 93 |
| BciT130I | CCWGG | 1 cut(s) | 1165 |
| BciVI | GTATCC | 1 cut(s) | 807 |
| BcnI | CCSGG | 1 cut(s) | 1381 |
| BcoDI | GTCTC | 3 cut(s) | 410, 947, 1307 |
| BfaI | CTAG | 4 cut(s) | 47, 279, 396, 1742 |
| BfmI | CTRYAG | 3 cut(s) | 222, 629, 1051 |
| BfrI | CTTAAG | 2 cut(s) | 803, 1070 |
| BfuAI | ACCTGC | 1 cut(s) | 980 |
| BfuI | GTATCC | 1 cut(s) | 807 |
| BglII | AGATCT | 2 cut(s) | 13, 458 |
| BisI | GCNGC | 7 cut(s) | 171, 632, 858, 861, 1238, 1259, 1697 |
| BlsI | GCNGC | 7 cut(s) | 172, 633, 859, 862, 1239, 1260, 1698 |
| BmcAI | AGTACT | 1 cut(s) | 1748 |
| Bme1390I | CCNGG | 2 cut(s) | 1165, 1381 |
| Bme18I | GGWCC | 1 cut(s) | 535 |
| BmgBI | CACGTC | 1 cut(s) | 1489 |
| BmgT120I | GGNCC | 2 cut(s) | 535, 624 |
| BmiI | GGNNCC | 4 cut(s) | 626, 1170, 1236, 1386 |
| BmrFI | CCNGG | 2 cut(s) | 1165, 1381 |
| BmrI | ACTGGG | 1 cut(s) | 1070 |
| BmsI | GCATC | 2 cut(s) | 643, 1683 |
| BmuI | ACTGGG | 1 cut(s) | 1070 |
| BpiI | GAAGAC | 2 cut(s) | 1367, 1735 |
| BpmI | CTGGAG | 1 cut(s) | 759 |
| Bpu10I | CCTNAGC | 2 cut(s) | 354, 1680 |
| BpuEI | CTTGAG | 3 cut(s) | 222, 837, 1697 |
| BpuMI | CCSGG | 1 cut(s) | 1381 |
| Bsa29I | ATCGAT | 1 cut(s) | 97 |
| BsaAI | YACGTR | 1 cut(s) | 913 |
| BsaBI | GATNNNNATC | 1 cut(s) | 12 |
| BsaJI | CCNNGG | 6 cut(s) | 434, 474, 1163, 1164, 1380, 1674 |
| BsaWI | WCCGGW | 2 cut(s) | 1171, 1767 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1289, 1319 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 692, 1381 |
| Bse1I | ACTGG | 1 cut(s) | 1065 |
| Bse8I | GATNNNNATC | 1 cut(s) | 12 |
| BseBI | CCWGG | 1 cut(s) | 1165 |
| BseCI | ATCGAT | 1 cut(s) | 97 |
| BseDI | CCNNGG | 6 cut(s) | 434, 474, 1163, 1164, 1380, 1674 |
| BseGI | GGATG | 8 cut(s) | 214, 580, 774, 941, 1070, 1330, 1473, 1776 |
| BseJI | GATNNNNATC | 1 cut(s) | 12 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 692, 1381 |
| BseMII | CTCAG | 6 cut(s) | 189, 345, 851, 912, 1145, 1694 |
| BseNI | ACTGG | 1 cut(s) | 1065 |
| BseRI | GAGGAG | 1 cut(s) | 750 |
| BseSI | GKGCMC | 1 cut(s) | 1035 |
| BseXI | GCAGC | 5 cut(s) | 643, 869, 872, 1245, 1708 |
| Bsh1236I | CGCG | 1 cut(s) | 421 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1768 |
| BshFI | GGCC | 2 cut(s) | 625, 1045 |
| BshNI | GGYRCC | 1 cut(s) | 1384 |
| BshVI | ATCGAT | 1 cut(s) | 97 |
| BsiEI | CGRYCG | 1 cut(s) | 1768 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1713 |
| BsiSI | CCGG | 4 cut(s) | 1042, 1172, 1380, 1768 |
| BslFI | GGGAC | 3 cut(s) | 754, 993, 1577 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 692, 1381 |
| BsmAI | GTCTC | 3 cut(s) | 410, 947, 1307 |
| BsmBI | CGTCTC | 1 cut(s) | 410 |
| BsmFI | GGGAC | 3 cut(s) | 754, 993, 1577 |
| BsmI | GAATGC | 1 cut(s) | 1727 |
| BsnI | GGCC | 2 cut(s) | 625, 1045 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1035, 1171, 1713 |
| Bsp19I | CCATGG | 2 cut(s) | 474, 1674 |
| BspACI | CCGC | 3 cut(s) | 170, 973, 1238 |
| BspANI | GGCC | 2 cut(s) | 625, 1045 |
| BspCNI | CTCAG | 6 cut(s) | 190, 346, 850, 913, 1146, 1693 |
| BspDI | ATCGAT | 1 cut(s) | 97 |
| BspFNI | CGCG | 1 cut(s) | 421 |
| BspLI | GGNNCC | 4 cut(s) | 626, 1170, 1236, 1386 |
| BspMAI | CTGCAG | 1 cut(s) | 633 |
| BspMI | ACCTGC | 1 cut(s) | 980 |
| BspPI | GGATC | 3 cut(s) | 15, 102, 1287 |
| BspT107I | GGYRCC | 1 cut(s) | 1384 |
| BspTI | CTTAAG | 2 cut(s) | 803, 1070 |
| BsrI | ACTGG | 1 cut(s) | 1065 |
| BssECI | CCNNGG | 6 cut(s) | 434, 474, 1163, 1164, 1380, 1674 |
| BssT1I | CCWWGG | 3 cut(s) | 434, 474, 1674 |
| Bst2UI | CCWGG | 1 cut(s) | 1165 |
| Bst4CI | ACNGT | 6 cut(s) | 116, 142, 1301, 1366, 1706, 1808 |
| Bst6I | CTCTTC | 2 cut(s) | 552, 877 |
| BstAFI | CTTAAG | 2 cut(s) | 803, 1070 |
| BstBAI | YACGTR | 1 cut(s) | 913 |
| BstC8I | GCNNGC | 3 cut(s) | 567, 987, 1389 |
| BstDSI | CCRYGG | 2 cut(s) | 474, 1674 |
| BstF5I | GGATG | 8 cut(s) | 214, 580, 774, 941, 1070, 1330, 1473, 1776 |
| BstFNI | CGCG | 1 cut(s) | 421 |
| BstHHI | GCGC | 2 cut(s) | 796, 1579 |
| BstMAI | GTCTC | 3 cut(s) | 410, 947, 1307 |
| BstMCI | CGRYCG | 1 cut(s) | 1768 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 176, 631, 647, 1109, 1246, 1255, 1457, 1576 |
| BstNI | CCWGG | 1 cut(s) | 1165 |
| BstNSI | RCATGY | 3 cut(s) | 453, 645, 1630 |
| BstSCI | CCNGG | 2 cut(s) | 1163, 1379 |
| BstSFI | CTRYAG | 3 cut(s) | 222, 629, 1051 |
| BstSLI | GKGCMC | 1 cut(s) | 1035 |
| BstUI | CGCG | 1 cut(s) | 421 |
| BstV1I | GCAGC | 5 cut(s) | 643, 869, 872, 1245, 1708 |
| BstV2I | GAAGAC | 2 cut(s) | 1367, 1735 |
| BstX2I | RGATCY | 2 cut(s) | 13, 458 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 463 |
| BstYI | RGATCY | 2 cut(s) | 13, 458 |
| Bsu15I | ATCGAT | 1 cut(s) | 97 |
| BsuI | GTATCC | 1 cut(s) | 807 |
| BsuRI | GGCC | 2 cut(s) | 625, 1045 |
| BsuTUI | ATCGAT | 1 cut(s) | 97 |
| BtgI | CCRYGG | 2 cut(s) | 474, 1674 |
| BtrI | CACGTC | 1 cut(s) | 1489 |
| BtsCI | GGATG | 8 cut(s) | 214, 580, 774, 941, 1070, 1330, 1473, 1776 |
| BtsI | GCAGTG | 2 cut(s) | 1012, 1586 |
| BtsIMutI | CAGTG | 3 cut(s) | 138, 1012, 1586 |
| BveI | ACCTGC | 1 cut(s) | 980 |
| Cac8I | GCNNGC | 3 cut(s) | 567, 987, 1389 |
| CaiI | CAGNNNCTG | 1 cut(s) | 863 |
| CfoI | GCGC | 2 cut(s) | 796, 1579 |
| Cfr13I | GGNCC | 2 cut(s) | 535, 624 |
| ClaI | ATCGAT | 1 cut(s) | 97 |
| CseI | GACGC | 1 cut(s) | 427 |
| Csp6I | GTAC | 3 cut(s) | 1142, 1594, 1747 |
| CviQI | GTAC | 3 cut(s) | 1142, 1594, 1747 |
| DraI | TTTAAA | 2 cut(s) | 427, 1791 |
| DraIII | CACNNNGTG | 1 cut(s) | 1018 |
| EaeI | YGGCCR | 1 cut(s) | 1043 |
| Eam1104I | CTCTTC | 2 cut(s) | 552, 877 |
| EarI | CTCTTC | 2 cut(s) | 552, 877 |
| Ecl136II | GAGCTC | 1 cut(s) | 1711 |
| Eco130I | CCWWGG | 3 cut(s) | 434, 474, 1674 |
| Eco24I | GRGCYC | 2 cut(s) | 1171, 1713 |
| Eco32I | GATATC | 1 cut(s) | 525 |
| Eco47I | GGWCC | 1 cut(s) | 535 |
| Eco53kI | GAGCTC | 1 cut(s) | 1711 |
| Eco57I | CTGAAG | 2 cut(s) | 252, 1199 |
| EcoICRI | GAGCTC | 1 cut(s) | 1711 |
| EcoRI | GAATTC | 1 cut(s) | 1158 |
| EcoRII | CCWGG | 1 cut(s) | 1163 |
| EcoRV | GATATC | 1 cut(s) | 525 |
| EcoT14I | CCWWGG | 3 cut(s) | 434, 474, 1674 |
| EcoT38I | GRGCYC | 2 cut(s) | 1171, 1713 |
| ErhI | CCWWGG | 3 cut(s) | 434, 474, 1674 |
| Esp3I | CGTCTC | 1 cut(s) | 410 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 74, 106, 1064, 1096, 1172, 1204 |
| FaqI | GGGAC | 3 cut(s) | 754, 993, 1577 |
| Fnu4HI | GCNGC | 7 cut(s) | 171, 632, 858, 861, 1238, 1259, 1697 |
| FokI | GGATG | 8 cut(s) | 221, 587, 761, 928, 1077, 1337, 1480, 1783 |
| FriOI | GRGCYC | 2 cut(s) | 1171, 1713 |
| Fsp4HI | GCNGC | 7 cut(s) | 171, 632, 858, 861, 1238, 1259, 1697 |
| FspBI | CTAG | 4 cut(s) | 47, 279, 396, 1742 |
| GlaI | GCGC | 2 cut(s) | 795, 1578 |
| GluI | GCNGC | 7 cut(s) | 171, 632, 858, 861, 1238, 1259, 1697 |
| GsuI | CTGGAG | 1 cut(s) | 759 |
| HaeIII | GGCC | 2 cut(s) | 625, 1045 |
| HapII | CCGG | 4 cut(s) | 1042, 1172, 1380, 1768 |
| HgaI | GACGC | 1 cut(s) | 427 |
| HhaI | GCGC | 2 cut(s) | 796, 1579 |
| Hin6I | GCGC | 2 cut(s) | 794, 1577 |
| HinP1I | GCGC | 2 cut(s) | 794, 1577 |
| HpaII | CCGG | 4 cut(s) | 1042, 1172, 1380, 1768 |
| HphI | GGTGA | 4 cut(s) | 128, 610, 1228, 1369 |
| Hpy166II | GTNNAC | 2 cut(s) | 902, 1297 |
| Hpy188I | TCNGA | 8 cut(s) | 62, 232, 549, 786, 1155, 1179, 1341, 1439 |
| Hpy8I | GTNNAC | 2 cut(s) | 902, 1297 |
| Hpy99I | CGWCG | 2 cut(s) | 71, 107 |
| HpyAV | CCTTC | 4 cut(s) | 185, 522, 658, 1554 |
| HpyCH4III | ACNGT | 6 cut(s) | 116, 142, 1301, 1366, 1706, 1808 |
| HpyCH4IV | ACGT | 3 cut(s) | 912, 1140, 1488 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 176, 631, 647, 1109, 1246, 1255, 1457, 1576 |
| HpySE526I | ACGT | 3 cut(s) | 912, 1140, 1488 |
| HspAI | GCGC | 2 cut(s) | 794, 1577 |
| LmnI | GCTCC | 3 cut(s) | 1174, 1234, 1254 |
| Lsp1109I | GCAGC | 5 cut(s) | 643, 869, 872, 1245, 1708 |
| LweI | GCATC | 2 cut(s) | 643, 1683 |
| MaeI | CTAG | 4 cut(s) | 47, 279, 396, 1742 |
| MaeII | ACGT | 3 cut(s) | 912, 1140, 1488 |
| MaeIII | GTNAC | 6 cut(s) | 551, 710, 742, 913, 1532, 1629 |
| MflI | RGATCY | 2 cut(s) | 13, 458 |
| MhlI | GDGCHC | 3 cut(s) | 1035, 1171, 1713 |
| MluCI | AATT | 5 cut(s) | 20, 244, 495, 584, 1158 |
| MluI | ACGCGT | 1 cut(s) | 419 |
| MlyI | GAGTC | 5 cut(s) | 236, 333, 1553, 1626, 1766 |
| MmeI | TCCRAC | 1 cut(s) | 366 |
| MroXI | GAANNNNTTC | 2 cut(s) | 511, 1607 |
| MseI | TTAA | 7 cut(s) | 38, 426, 798, 804, 1071, 1665, 1790 |
| MslI | CAYNNNNRTG | 2 cut(s) | 448, 961 |
| MspA1I | CMGCKG | 2 cut(s) | 863, 1240 |
| MspCI | CTTAAG | 2 cut(s) | 803, 1070 |
| MspI | CCGG | 4 cut(s) | 1042, 1172, 1380, 1768 |
| MspR9I | CCNGG | 2 cut(s) | 1165, 1381 |
| Mva1269I | GAATGC | 1 cut(s) | 1727 |
| MvaI | CCWGG | 1 cut(s) | 1165 |
| MvnI | CGCG | 1 cut(s) | 421 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 176, 631, 647, 1109, 1246, 1255, 1457, 1576 |
| NciI | CCSGG | 1 cut(s) | 1381 |
| NcoI | CCATGG | 2 cut(s) | 474, 1674 |
| NlaIV | GGNNCC | 4 cut(s) | 626, 1170, 1236, 1386 |
| NmuCI | GTSAC | 2 cut(s) | 742, 913 |
| NspI | RCATGY | 3 cut(s) | 453, 645, 1630 |
| PasI | CCCWGGG | 1 cut(s) | 1164 |
| PciI | ACATGT | 1 cut(s) | 449 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 66 |
| PctI | GAATGC | 1 cut(s) | 1727 |
| PdmI | GAANNNNTTC | 2 cut(s) | 511, 1607 |
| PkrI | GCNGC | 7 cut(s) | 172, 633, 859, 862, 1239, 1260, 1698 |
| PleI | GAGTC | 5 cut(s) | 235, 332, 1552, 1625, 1765 |
| PpsI | GAGTC | 5 cut(s) | 235, 332, 1552, 1625, 1765 |
| Ppu21I | YACGTR | 1 cut(s) | 913 |
| PscI | ACATGT | 1 cut(s) | 449 |
| PshBI | ATTAAT | 1 cut(s) | 38 |
| Psp124BI | GAGCTC | 1 cut(s) | 1713 |
| Psp6I | CCWGG | 1 cut(s) | 1163 |
| PspGI | CCWGG | 1 cut(s) | 1163 |
| PspN4I | GGNNCC | 4 cut(s) | 626, 1170, 1236, 1386 |
| PspPI | GGNCC | 2 cut(s) | 535, 624 |
| PstI | CTGCAG | 1 cut(s) | 633 |
| PstNI | CAGNNNCTG | 1 cut(s) | 863 |
| PsuI | RGATCY | 2 cut(s) | 13, 458 |
| PvuII | CAGCTG | 1 cut(s) | 863 |
| RsaI | GTAC | 3 cut(s) | 1143, 1595, 1748 |
| RsaNI | GTAC | 3 cut(s) | 1142, 1594, 1747 |
| RseI | CAYNNNNRTG | 2 cut(s) | 448, 961 |
| SacI | GAGCTC | 1 cut(s) | 1713 |
| SaqAI | TTAA | 7 cut(s) | 38, 426, 798, 804, 1071, 1665, 1790 |
| SatI | GCNGC | 7 cut(s) | 171, 632, 858, 861, 1238, 1259, 1697 |
| Sau96I | GGNCC | 2 cut(s) | 535, 624 |
| ScaI | AGTACT | 1 cut(s) | 1748 |
| SchI | GAGTC | 5 cut(s) | 236, 333, 1553, 1626, 1766 |
| ScrFI | CCNGG | 2 cut(s) | 1165, 1381 |
| SduI | GDGCHC | 3 cut(s) | 1035, 1171, 1713 |
| SfaNI | GCATC | 2 cut(s) | 643, 1683 |
| SfcI | CTRYAG | 3 cut(s) | 222, 629, 1051 |
| SinI | GGWCC | 1 cut(s) | 535 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 448, 961 |
| SmlI | CTYRAG | 5 cut(s) | 237, 803, 852, 1070, 1712 |
| SmoI | CTYRAG | 5 cut(s) | 237, 803, 852, 1070, 1712 |
| Sse9I | AATT | 5 cut(s) | 20, 244, 495, 584, 1158 |
| SsiI | CCGC | 3 cut(s) | 170, 973, 1238 |
| SspMI | CTAG | 4 cut(s) | 47, 279, 396, 1742 |
| SstI | GAGCTC | 1 cut(s) | 1713 |
| StyD4I | CCNGG | 2 cut(s) | 1163, 1379 |
| StyI | CCWWGG | 3 cut(s) | 434, 474, 1674 |
| TaaI | ACNGT | 6 cut(s) | 116, 142, 1301, 1366, 1706, 1808 |
| TaiI | ACGT | 3 cut(s) | 915, 1143, 1491 |
| TaqI | TCGA | 9 cut(s) | 18, 34, 66, 97, 105, 294, 327, 1517, 1764 |
| TasI | AATT | 5 cut(s) | 20, 244, 495, 584, 1158 |
| TatI | WGTACW | 1 cut(s) | 1746 |
| TauI | GCSGC | 2 cut(s) | 173, 1240 |
| Tru1I | TTAA | 7 cut(s) | 38, 426, 798, 804, 1071, 1665, 1790 |
| Tru9I | TTAA | 7 cut(s) | 38, 426, 798, 804, 1071, 1665, 1790 |
| TscAI | CASTG | 3 cut(s) | 145, 1019, 1586 |
| TseFI | GTSAC | 2 cut(s) | 742, 913 |
| TseI | GCWGC | 5 cut(s) | 631, 857, 860, 1258, 1696 |
| Tsp45I | GTSAC | 2 cut(s) | 742, 913 |
| TspDTI | ATGAA | 5 cut(s) | 17, 124, 323, 555, 930 |
| TspGWI | ACGGA | 4 cut(s) | 303, 882, 1653, 1785 |
| TspRI | CASTG | 3 cut(s) | 145, 1019, 1586 |
| Vha464I | CTTAAG | 2 cut(s) | 803, 1070 |
| VpaK11BI | GGWCC | 1 cut(s) | 535 |
| VspI | ATTAAT | 1 cut(s) | 38 |
| XapI | RAATTY | 3 cut(s) | 244, 584, 1158 |
| XceI | RCATGY | 3 cut(s) | 453, 645, 1630 |
| XmnI | GAANNNNTTC | 2 cut(s) | 511, 1607 |
| XspI | CTAG | 4 cut(s) | 47, 279, 396, 1742 |
| ZrmI | AGTACT | 1 cut(s) | 1748 |