Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0002897

Physical Location & Seq

Genomic Coordinates Forward (+)

4337008 .. 4341685

Gene Structure 4678 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g07200.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGGCGGCCACGATCTGGAAATGGAGAAAGCTCGACTGCTCAATCTGGCTCTCAATTTCGGGTTCGATGAAGAATCCGCCAACAACTGCTTGGATCGTCTCGTTGATCTCTACGGTGAAGATGGTCAAGATTTTATTACTGTGGAGCTCTGCGGTGATGAGTTTCTTTCACGGCTGGCTGAAACCGTTCAAGACACTGAAGAATGGGATGATTTACAAGCAATGGAGTCTGAAGCTTGTGGAGCATTGAATGACATGTTTGGAAATGGTAATGAGGAGGGTAATGATGATAATGCTAGTGCCGAGACCAACATGCCAGAAGATTCAGCTGATCGTCAAAAGTACCCAAATTTGTTGGTGCTGGATTCTAGTGATAGCGAGGACTTTGAATTAAGAACTCCGTTAAGAAGAACAGTTGGATCTTTATCTTCTTCATGCCCTGTTCCGAGCAGTTCTGCCTTGCTCCAGGATATGAAAAAAAGGTCTTCAAGTTCAAAAGATTGTAAAAGCACCATTACTCGAGACGCAGTTCCATCAATTTCTAGTAAAAAGCAGTGTGCTCAAACATCAAAGGATGAATTTAAGACTCTTACTTATGAAGAACTACAGTTACTAGATGATGCTGAGCTGGCCAATGTTGTAGCATTTGGTAATAGAAACTTTCGACCATTGCAGCATCAAGCCTGTAAAGCAGCCATGGCAAAGAAAGATTGCTTTATCCTAATGCCTACTGGAGGGGGTAAAAGTTTATGCTACCAGCTTCCTGCGATCCTGAAACCAGGTGTGACAATAGTTGTCTCTCCACTGCTTTCTCTGATTCAGGATCAGATAGTAACTCTGAACCTGAAGTTTGGTATACCAGCAACTTTTTTGAATTCTCAGCAAACTGGTTCGCAAGCAGCAGCTGTTCTCCAAGAGCTGAGGAAAGATAAGCCGTCATGCAAGCTTCTGTATGTAACTCCTGAGAGAATTGCTGGAAGCTCATGTTTCCTTGAGGTTCTAGAATGCTTGCATTTGAAGGGGATGCTAGCAGGATTTGTTGTTGATGAAGCACACTGCGTAAGCCAATGGGGACATGATTTTCGTCCAGATTACAAGGGATTAGGCTGTCTTAAGCAGAAATTTCGAGATGTTCCAGTGATGGCATTGACTGCTACTGCAACCCATCCAGTTCGTGACGACATACTAAAAATTTTGAAAATTCCCCATGCTCTTGTCCTTGAAAGAAGCTTTGACAGGCCCAATTTGAAATACGAAGTCATTGGTAAGGCAAAGGATGCACTGAAGCAGCTTGGGCAGCTACTGATGAGCCGTTTCCAGGACCAGAGTGGAATTATATACTGCCTCTCCAAAAGTGAATCTGTTGAGGTTTCAAAATTTCTGAATGAGAAATTTAAGATTAAGACAGCACATTACCATGCCGGGATAGCAGCTCGTCAAAGAGTTTCTGTACAAAAGAAATGGTACACAGGAGAGATCCAAATTGTATGTGCTACAATTGCTTTTGGGATGGGAATAGACAAGCCAGATGTTCGTTTTGTTATACACAACAGTCTATCCAAATCCATTGAAAGCTACTATCAAGAATCTGGAAGGGCTGGCAGAGATGATCTTCCTTCAGCATGCATTGTCCTGTACCAGAAGAAGGATTTCAGTCGGGTTGTATGTATGTTGCGAAACGGACAAGGATTTAAAAGTCAAAGATTCAAGACAGCTATGGCTCAAGCTCAGAAAATGCAAGAGTATTGTGAACTAAAGACTCAGTGTCGGAGACAAATGTTGCTCAAACACTTCGGAGAGTCTTTTGATGACAACTCCTGCAAAAATGGATCTAATCCTTGTGACAACTGTCTCAAGAGTTCTCGTGAAACTAAGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009266 GO:0009378 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031668 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0042221 GO:0042623 GO:0042631 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0070417 GO:0070887 GO:0071103 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0104004 GO:0140097 GO:1901360 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko03440 ko03460 map03440 map03460

Pfam Domains

Protein Families

DEAD Helicase_C RecQ_Zn_bind

Protein Analysis

627

Amino Acids

69.77

Weight (kDa)

6.32

Isoelectric Point (pI)

45.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	222 - 391	9.9e-25	DEAD/DEAH box helicase
Helicase_C	PF00271	428 - 535	3.3e-18	Helicase conserved C-terminal domain
RecQ_Zn_bind	PF16124	549 - 618	5.1e-15	RecQ zinc-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05740 AT3G05740
fragaria_vesca	FvH4_6g07200 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210
malus_domestica	MD04G1195500.v1.1 MD12G1207600.v1.1 MD12G1207700.v1.1 MD12G1207800.v1.1
prunus_persica	Prupe.6G315200_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1
pyrus_communis	pycom04g17270 pycom12g19520 pycom12g19530
rosa_chinensis	RchiOBHm_Chr3g0456831 RchiOBHm_Chr3g0456841
rosa_laevigata	RLG00000025275
rosa_multiflora	Rmu_co8434835.1_g000001 Rmu_sc0000133.1_g000020
rosa_roxburghii	Rroxscaffold_6G00422450 Rroxscaffold_6G00422460
rosa_rugosa	Rorug03G0016100 Rorug03G0016200 Rorug03G0016300.1
rosa_samantha	Rh3AG076400 Rh3AG076600 Rh3BG078200 Rh3BG078400 Rh3CG078000 Rh3CG078200 Rh3DG080100 Rh3DG080200
rosa_wichuraiana	Rw3G006560 Rw3G006570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	16
AccI	GTMKAC	1 cut(s)	856
AciI	CCGC	3 cut(s)	6, 78, 153
AclWI	GGATC	6 cut(s)	102, 427, 763, 831, 1471, 1837
AcoI	YGGCCR	2 cut(s)	7, 630
AcsI	RAATTY	8 cut(s)	349, 578, 874, 1121, 1191, 1200, 1376, 1391
AcuI	CTGAAG	5 cut(s)	219, 252, 866, 1304, 1602
AfaI	GTAC	4 cut(s)	344, 1452, 1466, 1637
AfiI	CCNNNNNNNGG	4 cut(s)	16, 734, 1318, 1645
AflII	CTTAAG	1 cut(s)	1112
AflIII	ACRYGT	1 cut(s)	255
AhdI	GACNNNNNGTC	1 cut(s)	1764
AjnI	CCWGG	3 cut(s)	465, 778, 1317
Alw21I	GWGCWC	2 cut(s)	150, 562
Alw26I	GTCTC	6 cut(s)	104, 299, 516, 802, 1765, 1856
AlwI	GGATC	6 cut(s)	102, 427, 763, 831, 1471, 1837
AlwNI	CAGNNNCTG	2 cut(s)	905, 1303
Ama87I	CYCGRG	1 cut(s)	519
AoxI	GGCC	3 cut(s)	7, 630, 1238
ApeKI	GCWGC	7 cut(s)	673, 692, 899, 902, 1288, 1297, 1430
ApoI	RAATTY	8 cut(s)	349, 578, 874, 1121, 1191, 1200, 1376, 1391
ArsI	GACNNNNNNTTYG	2 cut(s)	1065, 1097
Asp700I	GAANNNNTTC	2 cut(s)	186, 1649
AspS9I	GGNCC	2 cut(s)	1239, 1321
AsuC2I	CCSGG	1 cut(s)	1423
AsuHPI	GGTGA	2 cut(s)	128, 167
AsuNHI	GCTAGC	1 cut(s)	1027
AvaI	CYCGRG	1 cut(s)	519
AvaII	GGWCC	1 cut(s)	1321
BalI	TGGCCA	1 cut(s)	632
BanII	GRGCYC	1 cut(s)	150
BauI	CACGAG	1 cut(s)	1863
BbsI	GAAGAC	1 cut(s)	477
Bbv12I	GWGCWC	2 cut(s)	150, 562
BbvCI	CCTCAGC	1 cut(s)	920
BbvI	GCAGC	7 cut(s)	685, 704, 911, 914, 1300, 1309, 1442
BccI	CCATC	5 cut(s)	116, 541, 1135, 1173, 1504
BceAI	ACGGC	3 cut(s)	188, 919, 1296
BcgI	CGANNNNNNTGC	2 cut(s)	1106, 1140
BciT130I	CCWGG	3 cut(s)	467, 780, 1319
BcnI	CCSGG	1 cut(s)	1423
BcoDI	GTCTC	6 cut(s)	104, 299, 516, 802, 1765, 1856
BfaI	CTAG	6 cut(s)	297, 369, 543, 614, 1001, 1028
BfmI	CTRYAG	1 cut(s)	605
BfrI	CTTAAG	1 cut(s)	1112
BisI	GCNGC	8 cut(s)	7, 674, 693, 900, 903, 1289, 1298, 1431
BlpI	GCTNAGC	1 cut(s)	624
BlsI	GCNGC	8 cut(s)	8, 675, 694, 901, 904, 1290, 1299, 1432
Bme1390I	CCNGG	4 cut(s)	467, 780, 1319, 1423
Bme18I	GGWCC	1 cut(s)	1321
BmeRI	GACNNNNNGTC	1 cut(s)	1764
BmeT110I	CYCGRG	1 cut(s)	519
BmgT120I	GGNCC	2 cut(s)	1239, 1321
BmrFI	CCNGG	4 cut(s)	467, 780, 1319, 1423
BmsI	GCATC	4 cut(s)	610, 685, 1014, 1267
BmtI	GCTAGC	1 cut(s)	1031
BoxI	GACNNNNGTC	1 cut(s)	1848
BpiI	GAAGAC	1 cut(s)	477
BpmI	CTGGAG	2 cut(s)	449, 753
Bpu10I	CCTNAGC	1 cut(s)	920
Bpu1102I	GCTNAGC	1 cut(s)	624
BpuEI	CTTGAG	3 cut(s)	1013, 1707, 1838
BpuMI	CCSGG	1 cut(s)	1423
BsaBI	GATNNNNATC	1 cut(s)	424
BsaI	GGTCTC	1 cut(s)	299
BsaJI	CCNNGG	1 cut(s)	696
BsaXI	ACNNNNNCTCC	2 cut(s)	1331, 1361
Bsc4I	CCNNNNNNNGG	4 cut(s)	16, 734, 1318, 1645
Bse1I	ACTGG	4 cut(s)	736, 892, 1136, 1169
Bse3DI	GCAATG	2 cut(s)	228, 668
Bse8I	GATNNNNATC	1 cut(s)	424
BseBI	CCWGG	3 cut(s)	467, 780, 1319
BseDI	CCNNGG	1 cut(s)	696
BseGI	GGATG	6 cut(s)	214, 580, 1029, 1165, 1282, 1515
BseJI	GATNNNNATC	1 cut(s)	424
BseLI	CCNNNNNNNGG	4 cut(s)	16, 734, 1318, 1645
BseMI	GCAATG	2 cut(s)	228, 668
BseMII	CTCAG	6 cut(s)	615, 893, 911, 954, 1742, 1775
BseNI	ACTGG	4 cut(s)	736, 892, 1136, 1169
BseRI	GAGGAG	1 cut(s)	290
BseXI	GCAGC	7 cut(s)	685, 704, 911, 914, 1300, 1309, 1442
BshFI	GGCC	3 cut(s)	9, 632, 1240
BsiHKAI	GWGCWC	2 cut(s)	150, 562
BsiHKCI	CYCGRG	1 cut(s)	519
BsiSI	CCGG	1 cut(s)	1422
BslFI	GGGAC	1 cut(s)	1086
BslI	CCNNNNNNNGG	4 cut(s)	16, 734, 1318, 1645
BsmAI	GTCTC	6 cut(s)	104, 299, 516, 802, 1765, 1856
BsmBI	CGTCTC	2 cut(s)	104, 516
BsmFI	GGGAC	1 cut(s)	1086
BsmI	GAATGC	1 cut(s)	1010
BsnI	GGCC	3 cut(s)	9, 632, 1240
Bso31I	GGTCTC	1 cut(s)	299
BsoBI	CYCGRG	1 cut(s)	519
Bsp1286I	GDGCHC	2 cut(s)	150, 562
Bsp1407I	TGTACA	1 cut(s)	1450
Bsp1720I	GCTNAGC	1 cut(s)	624
Bsp19I	CCATGG	1 cut(s)	696
BspACI	CCGC	3 cut(s)	6, 78, 153
BspANI	GGCC	3 cut(s)	9, 632, 1240
BspCNI	CTCAG	6 cut(s)	616, 892, 912, 955, 1741, 1774
BspOI	GCTAGC	1 cut(s)	1031
BspPI	GGATC	6 cut(s)	102, 427, 763, 831, 1471, 1837
BspTI	CTTAAG	1 cut(s)	1112
BspTNI	GGTCTC	1 cut(s)	299
BsrDI	GCAATG	2 cut(s)	228, 668
BsrGI	TGTACA	1 cut(s)	1450
BsrI	ACTGG	4 cut(s)	736, 892, 1136, 1169
BssECI	CCNNGG	1 cut(s)	696
BssNAI	GTATAC	1 cut(s)	857
BssSI	CACGAG	1 cut(s)	1863
BssT1I	CCWWGG	1 cut(s)	696
Bst1107I	GTATAC	1 cut(s)	857
Bst2BI	CACGAG	1 cut(s)	1863
Bst2UI	CCWGG	3 cut(s)	467, 780, 1319
Bst4CI	ACNGT	7 cut(s)	116, 142, 187, 415, 609, 1553, 1850
BstAFI	CTTAAG	1 cut(s)	1112
BstAPI	GCANNNNNTGC	2 cut(s)	1151, 1277
BstAUI	TGTACA	1 cut(s)	1450
BstC8I	GCNNGC	8 cut(s)	177, 630, 897, 944, 1010, 1029, 1600, 1624
BstDEI	CTNAG	7 cut(s)	624, 879, 920, 963, 1728, 1761, 1872
BstDSI	CCRYGG	1 cut(s)	696
BstENI	CCTNNNNNAGG	1 cut(s)	732
BstF5I	GGATG	6 cut(s)	214, 580, 1029, 1165, 1282, 1515
BstMAI	GTCTC	6 cut(s)	104, 299, 516, 802, 1765, 1856
BstNI	CCWGG	3 cut(s)	467, 780, 1319
BstNSI	RCATGY	3 cut(s)	259, 316, 1626
BstPAI	GACNNNNGTC	1 cut(s)	1848
BstSCI	CCNGG	4 cut(s)	465, 778, 1317, 1421
BstSFI	CTRYAG	1 cut(s)	605
BstV1I	GCAGC	7 cut(s)	685, 704, 911, 914, 1300, 1309, 1442
BstV2I	GAAGAC	1 cut(s)	477
BstX2I	RGATCY	3 cut(s)	419, 1476, 1829
BstYI	RGATCY	3 cut(s)	419, 1476, 1829
BstZ17I	GTATAC	1 cut(s)	857
BsuRI	GGCC	3 cut(s)	9, 632, 1240
BtgI	CCRYGG	1 cut(s)	696
BtsCI	GGATG	6 cut(s)	214, 580, 1029, 1165, 1282, 1515
BtsI	GCAGTG	3 cut(s)	560, 803, 1054
BtsIMutI	CAGTG	7 cut(s)	195, 560, 803, 1054, 1143, 1280, 1769
Cac8I	GCNNGC	8 cut(s)	177, 630, 897, 944, 1010, 1029, 1600, 1624
CaiI	CAGNNNCTG	2 cut(s)	905, 1303
Cfr13I	GGNCC	2 cut(s)	1239, 1321
CseI	GACGC	1 cut(s)	533
CsiI	ACCWGGT	1 cut(s)	778
Csp6I	GTAC	4 cut(s)	343, 1451, 1465, 1636
CviQI	GTAC	4 cut(s)	343, 1451, 1465, 1636
DdeI	CTNAG	7 cut(s)	624, 879, 920, 963, 1728, 1761, 1872
DraI	TTTAAA	1 cut(s)	1693
DriI	GACNNNNNGTC	1 cut(s)	1764
EaeI	YGGCCR	2 cut(s)	7, 630
Eam1105I	GACNNNNNGTC	1 cut(s)	1764
EciI	GGCGGA	1 cut(s)	67
Ecl136II	GAGCTC	1 cut(s)	148
Eco130I	CCWWGG	1 cut(s)	696
Eco24I	GRGCYC	1 cut(s)	150
Eco31I	GGTCTC	1 cut(s)	299
Eco47I	GGWCC	1 cut(s)	1321
Eco53kI	GAGCTC	1 cut(s)	148
Eco57I	CTGAAG	5 cut(s)	219, 252, 866, 1304, 1602
Eco88I	CYCGRG	1 cut(s)	519
EcoICRI	GAGCTC	1 cut(s)	148
EcoNI	CCTNNNNNAGG	1 cut(s)	732
EcoRI	GAATTC	1 cut(s)	874
EcoRII	CCWGG	3 cut(s)	465, 778, 1317
EcoT14I	CCWWGG	1 cut(s)	696
EcoT22I	ATGCAT	1 cut(s)	1628
EcoT38I	GRGCYC	1 cut(s)	150
ErhI	CCWWGG	1 cut(s)	696
Esp3I	CGTCTC	2 cut(s)	104, 516
FaqI	GGGAC	1 cut(s)	1086
FblI	GTMKAC	1 cut(s)	856
Fnu4HI	GCNGC	8 cut(s)	7, 674, 693, 900, 903, 1289, 1298, 1431
FokI	GGATG	6 cut(s)	221, 587, 1036, 1152, 1289, 1522
FriOI	GRGCYC	1 cut(s)	150
Fsp4HI	GCNGC	8 cut(s)	7, 674, 693, 900, 903, 1289, 1298, 1431
FspBI	CTAG	6 cut(s)	297, 369, 543, 614, 1001, 1028
GluI	GCNGC	8 cut(s)	7, 674, 693, 900, 903, 1289, 1298, 1431
GsuI	CTGGAG	2 cut(s)	449, 753
HaeIII	GGCC	3 cut(s)	9, 632, 1240
HapII	CCGG	1 cut(s)	1422
HgaI	GACGC	1 cut(s)	533
HindIII	AAGCTT	3 cut(s)	234, 944, 1228
HpaII	CCGG	1 cut(s)	1422
HphI	GGTGA	2 cut(s)	128, 167
Hpy166II	GTNNAC	3 cut(s)	857, 1467, 1751
Hpy188I	TCNGA	9 cut(s)	232, 447, 816, 828, 840, 1383, 1731, 1770, 1796
Hpy8I	GTNNAC	3 cut(s)	857, 1467, 1751
HpyAV	CCTTC	4 cut(s)	1012, 1587, 1626, 1639
HpyCH4III	ACNGT	7 cut(s)	116, 142, 187, 415, 609, 1553, 1850
HpyCH4V	TGCA	8 cut(s)	673, 942, 1012, 1160, 1280, 1626, 1738, 1821
HpyF3I	CTNAG	7 cut(s)	624, 879, 920, 963, 1728, 1761, 1872
LmnI	GCTCC	3 cut(s)	145, 242, 468
Lsp1109I	GCAGC	7 cut(s)	685, 704, 911, 914, 1300, 1309, 1442
LweI	GCATC	4 cut(s)	610, 685, 1014, 1267
MabI	ACCWGGT	1 cut(s)	778
MaeI	CTAG	6 cut(s)	297, 369, 543, 614, 1001, 1028
MaeIII	GTNAC	6 cut(s)	609, 784, 832, 955, 1175, 1841
MfeI	CAATTG	1 cut(s)	1497
MflI	RGATCY	3 cut(s)	419, 1476, 1829
MhlI	GDGCHC	2 cut(s)	150, 562
MlsI	TGGCCA	1 cut(s)	632
MluNI	TGGCCA	1 cut(s)	632
MlyI	GAGTC	4 cut(s)	236, 580, 1753, 1808
MmeI	TCCRAC	2 cut(s)	397, 1748
MnlI	CCTC	8 cut(s)	268, 271, 373, 728, 915, 988, 1355, 1360
Mox20I	TGGCCA	1 cut(s)	632
Mph1103I	ATGCAT	1 cut(s)	1628
MroXI	GAANNNNTTC	2 cut(s)	186, 1649
MscI	TGGCCA	1 cut(s)	632
MseI	TTAA	7 cut(s)	392, 404, 582, 1113, 1395, 1401, 1692
MslI	CAYNNNNRTG	1 cut(s)	1416
Msp20I	TGGCCA	1 cut(s)	632
MspA1I	CMGCKG	2 cut(s)	329, 905
MspCI	CTTAAG	1 cut(s)	1112
MspI	CCGG	1 cut(s)	1422
MspR9I	CCNGG	4 cut(s)	467, 780, 1319, 1423
MunI	CAATTG	1 cut(s)	1497
Mva1269I	GAATGC	1 cut(s)	1010
MvaI	CCWGG	3 cut(s)	467, 780, 1319
NciI	CCSGG	1 cut(s)	1423
NcoI	CCATGG	1 cut(s)	696
NheI	GCTAGC	1 cut(s)	1027
NmeAIII	GCCGAG	1 cut(s)	328
NmuCI	GTSAC	3 cut(s)	784, 1175, 1841
NsiI	ATGCAT	1 cut(s)	1628
NspI	RCATGY	3 cut(s)	259, 316, 1626
PaeI	GCATGC	1 cut(s)	1626
PaeR7I	CTCGAG	1 cut(s)	519
PciI	ACATGT	1 cut(s)	255
PctI	GAATGC	1 cut(s)	1010
PdmI	GAANNNNTTC	2 cut(s)	186, 1649
PfeI	GAWTC	7 cut(s)	74, 323, 365, 817, 1358, 1586, 1704
PflMI	CCANNNNNTGG	1 cut(s)	16
PfoI	TCCNGGA	2 cut(s)	465, 1317
PkrI	GCNGC	8 cut(s)	8, 675, 694, 901, 904, 1290, 1299, 1432
PleI	GAGTC	4 cut(s)	235, 580, 1753, 1807
PpsI	GAGTC	4 cut(s)	235, 580, 1753, 1807
PscI	ACATGT	1 cut(s)	255
PshAI	GACNNNNGTC	1 cut(s)	1848
Psp124BI	GAGCTC	1 cut(s)	150
Psp6I	CCWGG	3 cut(s)	465, 778, 1317
PspGI	CCWGG	3 cut(s)	465, 778, 1317
PspPI	GGNCC	2 cut(s)	1239, 1321
PsrI	GAACNNNNNNTAC	2 cut(s)	594, 626
PstNI	CAGNNNCTG	2 cut(s)	905, 1303
PsuI	RGATCY	3 cut(s)	419, 1476, 1829
PvuII	CAGCTG	2 cut(s)	329, 905
RsaI	GTAC	4 cut(s)	344, 1452, 1466, 1637
RsaNI	GTAC	4 cut(s)	343, 1451, 1465, 1636
RseI	CAYNNNNRTG	1 cut(s)	1416
SacI	GAGCTC	1 cut(s)	150
SaqAI	TTAA	7 cut(s)	392, 404, 582, 1113, 1395, 1401, 1692
SatI	GCNGC	8 cut(s)	7, 674, 693, 900, 903, 1289, 1298, 1431
Sau96I	GGNCC	2 cut(s)	1239, 1321
SchI	GAGTC	4 cut(s)	236, 580, 1753, 1808
ScrFI	CCNGG	4 cut(s)	467, 780, 1319, 1423
SduI	GDGCHC	2 cut(s)	150, 562
SexAI	ACCWGGT	1 cut(s)	778
SfaNI	GCATC	4 cut(s)	610, 685, 1014, 1267
SfcI	CTRYAG	1 cut(s)	605
Sfr274I	CTCGAG	1 cut(s)	519
SinI	GGWCC	1 cut(s)	1321
SlaI	CTCGAG	1 cut(s)	519
SmiMI	CAYNNNNRTG	1 cut(s)	1416
SmlI	CTYRAG	5 cut(s)	519, 992, 1112, 1722, 1853
SmoI	CTYRAG	5 cut(s)	519, 992, 1112, 1722, 1853
SphI	GCATGC	1 cut(s)	1626
SsiI	CCGC	3 cut(s)	6, 78, 153
SspMI	CTAG	6 cut(s)	297, 369, 543, 614, 1001, 1028
SstI	GAGCTC	1 cut(s)	150
StyD4I	CCNGG	4 cut(s)	465, 778, 1317, 1421
StyI	CCWWGG	1 cut(s)	696
TaaI	ACNGT	7 cut(s)	116, 142, 187, 415, 609, 1553, 1850
TaqI	TCGA	5 cut(s)	34, 66, 520, 664, 1126
TatI	WGTACW	1 cut(s)	1450
TauI	GCSGC	1 cut(s)	9
TfiI	GAWTC	7 cut(s)	74, 323, 365, 817, 1358, 1586, 1704
Tru1I	TTAA	7 cut(s)	392, 404, 582, 1113, 1395, 1401, 1692
Tru9I	TTAA	7 cut(s)	392, 404, 582, 1113, 1395, 1401, 1692
TscAI	CASTG	7 cut(s)	202, 560, 810, 1061, 1143, 1287, 1769
TseFI	GTSAC	3 cut(s)	784, 1175, 1841
TseI	GCWGC	7 cut(s)	673, 692, 899, 902, 1288, 1297, 1430
Tsp45I	GTSAC	3 cut(s)	784, 1175, 1841
TspDTI	ATGAA	6 cut(s)	84, 423, 488, 591, 612, 1062
TspGWI	ACGGA	2 cut(s)	390, 1695
TspRI	CASTG	7 cut(s)	202, 560, 810, 1061, 1143, 1287, 1769
Van91I	CCANNNNNTGG	1 cut(s)	16
Vha464I	CTTAAG	1 cut(s)	1112
VpaK11BI	GGWCC	1 cut(s)	1321
XagI	CCTNNNNNAGG	1 cut(s)	732
XapI	RAATTY	8 cut(s)	349, 578, 874, 1121, 1191, 1200, 1376, 1391
XbaI	TCTAGA	1 cut(s)	1000
XceI	RCATGY	3 cut(s)	259, 316, 1626
XcmI	CCANNNNNNNNNTGG	2 cut(s)	88, 1325
XhoI	CTCGAG	1 cut(s)	519
XmiI	GTMKAC	1 cut(s)	856
XmnI	GAANNNNTTC	2 cut(s)	186, 1649
XspI	CTAG	6 cut(s)	297, 369, 543, 614, 1001, 1028
Zsp2I	ATGCAT	1 cut(s)	1628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.