Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0002897

Physical Location & Seq

Genomic Coordinates Reverse (-)

19717206 .. 19721257

Gene Structure 4052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g17270.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

ATGAAGGATTTGAGGCTGATTGGTTGGCAGTGTTGTTATATTTTGAATACCTTTGCACATTTAGTACAAATTGCCACATGGGTTCTGTTGAAGTGGTCCTTTTTGTTTGAATCCCAGGCTCCTATAGGTCTGTGGAAGACAAAAATGGAGGTTGAGAAGAAACGTTCAAAAGGGGGCTTTCTTAACTTGTTTGACTGGAATGGAAAATCTCGGAAGAAGCTCTTCTCGGCCAGTTCTGAATCATCGGGGCTCTATAGGGTAGAGGTGGATGAGAGTGGAACTGCAACCACTTTAAGTAATAAAGGAAGTAATGACTGGAATTGTGCTTCATCAGTGACCAGTGATGAGGGATGTGGGGTTAGAGCCCCTGGTGTAGTTGCTAGATTAATGGGTCTGGATTCACTGCCTGCTTCAACTGCCCCGGAGCCATCTTCTGCCCTACTCTTTGACTCCCAGTCGCTTAAAGCATCTCAACATGAGAGGAGTGGTCGTAATTTGTGCAGTGATTTTTATGCCACCGAGTACATAAATGTGCCAAAGAAGCTGGATAGGTTTTCTTGGAATCTTGTAGAGCCTAGGACACAGGGGGTACCATGCCACCCAATTAAGAGATTTCAAACAGAAGCTTTGCCTCCAAAATCAACCAAGTCAATTCCAGTTCCTCAACATAAGCTTTTGTCACCTGTCAAGAGTCCTGGCTTCATTCCACCAAAAAATGCGGCTTATGTAATGGAGGCAGCCTCAAAGATCATTGAGGCAAGTCCTCGACCATCTGTCAGGAGCAAAGTGTCATCTGTGGGGCCTTCTTCAATTCCCTTGAGAATTCGGGATTTGAAAGAGAAGATGGAAGCTGTGCATAAAGCATCAAGACCTGAAGGACCCAAGGAAGCTAGTGACTTGAGGTATGTGAAAGGACTGCCAAGTGACAGGCGCCAGAACGGGTCAGGTAATGTACCAGTATCCAAGGCTTCTGTGGATTCAGAAAAACAAAGTTACAGGGATATGAGGAATAAGGGCAAATCACCATCACTTGCAGAACAAGCAAAGGTCAATGTTCAGAGAAGGGAGGGGTCAACTTCTTCTAGTAATAAAAGTTTTATGAACCAGAAGGAACAAAATGAGGTCAAACAAAATCAGTTTTCCAAGAGCAGGTCAACTACACAAAGACCTATGCATAAGAGAACTTCCGTTGACAACACAAGAACTGCGCTCAAGCAGAATAACCAGAAGCAGAATTGTGTATCTAACAGAGAGAAAATGACTTCAAAAGGTATGGTTCCTAATCAGCCTACTAGAAGAATGCGGCCACCTGATGGCTCTAGTGGGCCAAGCAAAACTATGAATAAGACTATTCTAAGCTCTGAAATTGGTTCCAGAAAGATGGGCTCAAGGGCAACTGCTACTGGAAAAGAGTTTTCATTATCCACAAGAAAGAATGTTTGTGGAAACTTAAGGTCTGTTCATCAGGATGTTCGCTCAGAAGAAACTGTTTCCGATGAAGCATATATTGGGGAGGATGAAAGATCAGTGAAATGTAATGTTTCAAGGAATGGGTGCACCAATTTGGGCGCAGATAATAGGAACCAAGGCATGGATGTTATTTCATTTACATTCACGTCTCTCCTGGATCGATCATTCTCTGAATTGCAGTCACCTCAAGTCACAAGTATAAATAACAGCTATTGTATTGATTCTTTTGGTAACAATGATGAGCAGTTCTATCCAGAGAATTTCACATTATCTTCTCCTGGGTTGAACGTGATTGGTGGTGATGCTTTGAGTGTCCTTTTGGAACAAAAGCTTCAAGAACTGTCATGTAAAGTTGAGTCATCTCAGCGTAATCAATCCAGTGAAGTGACTTCTGGTAGTTCTACGTCTTGCTTGCAAGATATGGTTTCCAGTGTGGCTAGCACTACATCAAGAGGCAAGGGGTTCAAATTTGGTTTAACCAAACATAAAACTCACAGCACATACGACAATGGTTGCTTGTCGGTTGAGGTTAACCAGCAGTGGCAGGGATCAGAAGGCGTAGAAGAGTGTATCAGTAGCATCAGAAACAGTGCAACTGGAAAAGAATTTGATCGACGTCTTAGTCCAGTTTCAGTTTTTGAACACTCATTTGAGAGTCGAAGCACCAATGGCAGTGACACTGAGAGATGTTCGTTGGCTCAAGTTCAAGATCAAGGTAGTTCATTCTCTTCATATGGTGTTTCAGAGTTCCTCGACTCAGCCTCTTCAGCTTCCACAGGGGATGCCAGCGGAAAGAGTACGACTATAATCTCAGGTTCCTATTATTTTAATCAAACAAACGATTGGGAACTGGAATATGTAAGATACATCCTAAGCAATGTAGATTTAGAGATGGAAGAGTTCGCATTGGGTGATGCTCAACACGTCATCACCCCCAGTCTCTTTGACCATTTGGATAATCAAGAACAAGAAGAGTATCTGAAGCTCGAGCAGAAGATCTTGTTTGACTGCGTAAACGAAACCCTGCAGTTCAGATGCAAGCAAATTTTTGTGGGAAGCCGCAAAGCGTGGGATAGATTGACCACATTGTCTCAGAGGAAGGGACAGCTAGCTGAGGAGTTGTACAAAGAGATTTCGGGTTGTAAAAACATGGTAGAACTGATTGGGGATGAGCTTGTGGACAAGGACATGAGCACTCAGCGTGGGAAATGGCTTGACTTCGAAGTCGAAGCATTTGAGGAGGGTCTGGAGATTGAGAAGGGGATACTGAATTGTCTGGTGGATGAGTTGGTGTCTGATTTTTTTAACTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

928

Amino Acids

103.04

Weight (kDa)

8.09

Isoelectric Point (pI)

52.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05740 AT3G05740
fragaria_vesca	FvH4_6g07200 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210
malus_domestica	MD04G1195500.v1.1 MD12G1207600.v1.1 MD12G1207700.v1.1 MD12G1207800.v1.1
prunus_persica	Prupe.6G315200_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1
pyrus_communis	pycom04g17270 pycom12g19520 pycom12g19530
rosa_chinensis	RchiOBHm_Chr3g0456831 RchiOBHm_Chr3g0456841
rosa_laevigata	RLG00000025275
rosa_multiflora	Rmu_co8434835.1_g000001 Rmu_sc0000133.1_g000020
rosa_roxburghii	Rroxscaffold_6G00422450 Rroxscaffold_6G00422460
rosa_rugosa	Rorug03G0016100 Rorug03G0016200 Rorug03G0016300.1
rosa_samantha	Rh3AG076400 Rh3AG076600 Rh3BG078200 Rh3BG078400 Rh3CG078000 Rh3CG078200 Rh3DG080100 Rh3DG080200
rosa_wichuraiana	Rw3G006560 Rw3G006570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	2091, 2557, 2693
AatII	GACGTC	1 cut(s)	2089
Acc36I	ACCTGC	1 cut(s)	1140
Acc65I	GGTACC	1 cut(s)	589
AccB1I	GGYRCC	2 cut(s)	589, 930
AccB7I	CCANNNNNTGG	2 cut(s)	1313, 1591
AciI	CCGC	4 cut(s)	719, 1303, 2259, 2530
AclI	AACGTT	1 cut(s)	163
AclWI	GGATC	2 cut(s)	1635, 2026
AcoI	YGGCCR	2 cut(s)	228, 1304
AcsI	RAATTY	5 cut(s)	822, 1729, 1937, 2075, 2514
AcuI	CTGAAG	3 cut(s)	894, 2220, 2471
AcyI	GRCGYC	2 cut(s)	931, 2086
AfaI	GTAC	6 cut(s)	66, 524, 591, 954, 2269, 2594
AfiI	CCNNNNNNNGG	3 cut(s)	1149, 1313, 1591
AflII	CTTAAG	1 cut(s)	1450
AflIII	ACRYGT	1 cut(s)	2392
AhdI	GACNNNNNGTC	2 cut(s)	454, 773
AjiI	CACGTC	2 cut(s)	1617, 2395
AjnI	CCWGG	5 cut(s)	114, 367, 694, 1623, 1747
AjuI	GAANNNNNNNTTGG	2 cut(s)	1491, 1523
Alw21I	GWGCWC	2 cut(s)	1559, 2666
Alw26I	GTCTC	3 cut(s)	1623, 2414, 2565
Alw44I	GTGCAC	1 cut(s)	1555
AlwI	GGATC	2 cut(s)	1635, 2026
Ama87I	CYCGRG	1 cut(s)	2456
AoxI	GGCC	4 cut(s)	228, 800, 1304, 1325
ApaLI	GTGCAC	1 cut(s)	1555
ApeKI	GCWGC	1 cut(s)	737
ApoI	RAATTY	5 cut(s)	822, 1729, 1937, 2075, 2514
AseI	ATTAAT	1 cut(s)	386
Asp700I	GAANNNNTTC	1 cut(s)	221
Asp718I	GGTACC	1 cut(s)	589
AspA2I	CCTAGG	1 cut(s)	575
AspLEI	GCGC	3 cut(s)	933, 1210, 1571
AspS9I	GGNCC	4 cut(s)	96, 800, 878, 1325
AsuC2I	CCSGG	1 cut(s)	422
AsuHPI	GGTGA	6 cut(s)	672, 1014, 1644, 1781, 2392, 2393
AsuII	TTCGAA	1 cut(s)	2691
AsuNHI	GCTAGC	2 cut(s)	1907, 2578
AvaI	CYCGRG	1 cut(s)	2456
AvaII	GGWCC	2 cut(s)	96, 878
AvrII	CCTAGG	1 cut(s)	575
BaeGI	GKGCMC	1 cut(s)	1559
BanI	GGYRCC	2 cut(s)	589, 930
BanII	GRGCYC	3 cut(s)	252, 367, 1388
BbsI	GAAGAC	1 cut(s)	143
Bbv12I	GWGCWC	2 cut(s)	1559, 2666
BbvCI	CCTCAGC	1 cut(s)	2583
BbvI	GCAGC	1 cut(s)	749
BccI	CCATC	7 cut(s)	436, 778, 838, 1033, 1307, 1375, 2356
BciT130I	CCWGG	5 cut(s)	116, 369, 696, 1625, 1749
BciVI	GTATCC	2 cut(s)	970, 2727
BcnI	CCSGG	1 cut(s)	422
BcoDI	GTCTC	3 cut(s)	1623, 2414, 2565
BfaI	CTAG	9 cut(s)	381, 576, 891, 1083, 1293, 1320, 1908, 2579, 2782
BfmI	CTRYAG	3 cut(s)	123, 253, 2495
BfoI	RGCGCY	1 cut(s)	934
BfrI	CTTAAG	1 cut(s)	1450
BfuAI	ACCTGC	1 cut(s)	1140
BfuI	GTATCC	2 cut(s)	970, 2727
BglII	AGATCT	1 cut(s)	2466
BisI	GCNGC	4 cut(s)	720, 738, 1304, 2530
BlnI	CCTAGG	1 cut(s)	575
BlsI	GCNGC	4 cut(s)	721, 739, 1305, 2531
Bme1390I	CCNGG	6 cut(s)	116, 369, 422, 696, 1625, 1749
Bme18I	GGWCC	2 cut(s)	96, 878
BmeRI	GACNNNNNGTC	2 cut(s)	454, 773
BmeT110I	CYCGRG	1 cut(s)	2456
BmgBI	CACGTC	2 cut(s)	1617, 2395
BmgT120I	GGNCC	4 cut(s)	96, 800, 878, 1325
BmrFI	CCNGG	6 cut(s)	116, 369, 422, 696, 1625, 1749
BmrI	ACTGGG	2 cut(s)	448, 2400
BmsI	GCATC	7 cut(s)	476, 872, 1762, 2058, 2242, 2374, 2495
BmtI	GCTAGC	2 cut(s)	1911, 2582
BmuI	ACTGGG	2 cut(s)	448, 2400
BpiI	GAAGAC	1 cut(s)	143
BplI	GAGNNNNNCTC	2 cut(s)	725, 757
BpmI	CTGGAG	1 cut(s)	2738
Bpu10I	CCTNAGC	2 cut(s)	2342, 2583
Bpu14I	TTCGAA	1 cut(s)	2691
BpuEI	CTTGAG	6 cut(s)	838, 919, 1196, 1372, 1641, 2154
BpuMI	CCSGG	1 cut(s)	422
Bsa29I	ATCGAT	1 cut(s)	1630
BsaHI	GRCGYC	2 cut(s)	931, 2086
BsaJI	CCNNGG	8 cut(s)	114, 367, 420, 575, 882, 963, 1585, 1748
BsaXI	ACNNNNNCTCC	2 cut(s)	475, 505
Bsc4I	CCNNNNNNNGG	3 cut(s)	1149, 1313, 1591
Bse3DI	GCAATG	1 cut(s)	2353
BseBI	CCWGG	5 cut(s)	116, 369, 696, 1625, 1749
BseCI	ATCGAT	1 cut(s)	1630
BseDI	CCNNGG	8 cut(s)	114, 367, 420, 575, 882, 963, 1585, 1748
BseGI	GGATG	9 cut(s)	274, 356, 1474, 1522, 1600, 2257, 2337, 2644, 2758
BseLI	CCNNNNNNNGG	3 cut(s)	1149, 1313, 1591
BseMI	GCAATG	1 cut(s)	2353
BseMII	CTCAG	8 cut(s)	1491, 1847, 2142, 2241, 2295, 2574, 2576, 2681
BseRI	GAGGAG	3 cut(s)	496, 2600, 2723
BseSI	GKGCMC	1 cut(s)	1559
BseXI	GCAGC	1 cut(s)	749
BsgI	GTGCAG	1 cut(s)	520
BshFI	GGCC	4 cut(s)	230, 802, 1306, 1327
BshNI	GGYRCC	2 cut(s)	589, 930
BshVI	ATCGAT	1 cut(s)	1630
BsiHKAI	GWGCWC	2 cut(s)	1559, 2666
BsiHKCI	CYCGRG	1 cut(s)	2456
BsiSI	CCGG	1 cut(s)	422
BslFI	GGGAC	1 cut(s)	2586
BslI	CCNNNNNNNGG	3 cut(s)	1149, 1313, 1591
BsmAI	GTCTC	3 cut(s)	1623, 2414, 2565
BsmBI	CGTCTC	1 cut(s)	1623
BsmFI	GGGAC	1 cut(s)	2586
BsmI	GAATGC	1 cut(s)	1305
BsnI	GGCC	4 cut(s)	230, 802, 1306, 1327
BsoBI	CYCGRG	1 cut(s)	2456
Bsp119I	TTCGAA	1 cut(s)	2691
Bsp1286I	GDGCHC	5 cut(s)	252, 367, 1388, 1559, 2666
Bsp1407I	TGTACA	1 cut(s)	2592
Bsp143I	GATC	8 cut(s)	747, 1523, 1627, 1631, 2018, 2080, 2179, 2466
BspACI	CCGC	4 cut(s)	719, 1303, 2259, 2530
BspANI	GGCC	4 cut(s)	230, 802, 1306, 1327
BspCNI	CTCAG	8 cut(s)	1490, 1846, 2143, 2240, 2294, 2575, 2575, 2680
BspDI	ATCGAT	1 cut(s)	1630
BspMAI	CTGCAG	1 cut(s)	2499
BspMI	ACCTGC	1 cut(s)	1140
BspOI	GCTAGC	2 cut(s)	1911, 2582
BspPI	GGATC	2 cut(s)	1635, 2026
BspQI	GCTCTTC	1 cut(s)	227
BspT104I	TTCGAA	1 cut(s)	2691
BspT107I	GGYRCC	2 cut(s)	589, 930
BspTI	CTTAAG	1 cut(s)	1450
BsrDI	GCAATG	1 cut(s)	2353
BsrGI	TGTACA	1 cut(s)	2592
BssECI	CCNNGG	8 cut(s)	114, 367, 420, 575, 882, 963, 1585, 1748
BssMI	GATC	8 cut(s)	747, 1523, 1627, 1631, 2018, 2080, 2179, 2466
BssNI	GRCGYC	2 cut(s)	931, 2086
BssT1I	CCWWGG	4 cut(s)	575, 882, 963, 1585
Bst2UI	CCWGG	5 cut(s)	116, 369, 696, 1625, 1749
Bst4CI	ACNGT	3 cut(s)	1489, 1812, 2060
Bst6I	CTCTTC	6 cut(s)	227, 2028, 2203, 2239, 2361, 2436
BstACI	GRCGYC	2 cut(s)	931, 2086
BstAFI	CTTAAG	1 cut(s)	1450
BstAUI	TGTACA	1 cut(s)	2592
BstBI	TTCGAA	1 cut(s)	2691
BstC8I	GCNNGC	6 cut(s)	408, 1883, 1909, 2257, 2510, 2580
BstF5I	GGATG	9 cut(s)	274, 356, 1474, 1522, 1600, 2257, 2337, 2644, 2758
BstH2I	RGCGCY	1 cut(s)	934
BstHHI	GCGC	3 cut(s)	933, 1210, 1571
BstKTI	GATC	8 cut(s)	750, 1526, 1630, 1634, 2021, 2083, 2182, 2469
BstMAI	GTCTC	3 cut(s)	1623, 2414, 2565
BstMBI	GATC	8 cut(s)	747, 1523, 1627, 1631, 2018, 2080, 2179, 2466
BstMWI	GCNNNNNNNGC	5 cut(s)	416, 541, 1040, 2139, 2237
BstNI	CCWGG	5 cut(s)	116, 369, 696, 1625, 1749
BstSCI	CCNGG	6 cut(s)	114, 367, 420, 694, 1623, 1747
BstSFI	CTRYAG	3 cut(s)	123, 253, 2495
BstSLI	GKGCMC	1 cut(s)	1559
BstV1I	GCAGC	1 cut(s)	749
BstV2I	GAAGAC	1 cut(s)	143
BstX2I	RGATCY	1 cut(s)	2466
BstXI	CCANNNNNNTGG	1 cut(s)	1381
BstYI	RGATCY	1 cut(s)	2466
Bsu15I	ATCGAT	1 cut(s)	1630
BsuI	GTATCC	2 cut(s)	970, 2727
BsuRI	GGCC	4 cut(s)	230, 802, 1306, 1327
BsuTUI	ATCGAT	1 cut(s)	1630
BtrI	CACGTC	2 cut(s)	1617, 2395
BtsCI	GGATG	9 cut(s)	274, 356, 1474, 1522, 1600, 2257, 2337, 2644, 2758
BtsI	GCAGTG	5 cut(s)	35, 401, 508, 2015, 2149
BveI	ACCTGC	1 cut(s)	1140
Cac8I	GCNNGC	6 cut(s)	408, 1883, 1909, 2257, 2510, 2580
CfoI	GCGC	3 cut(s)	933, 1210, 1571
Cfr13I	GGNCC	4 cut(s)	96, 800, 878, 1325
ClaI	ATCGAT	1 cut(s)	1630
Csp6I	GTAC	6 cut(s)	65, 523, 590, 953, 2268, 2593
CviAII	CATG	7 cut(s)	78, 476, 594, 1591, 1815, 2620, 2659
CviQI	GTAC	6 cut(s)	65, 523, 590, 953, 2268, 2593
DinI	GGCGCC	1 cut(s)	932
DpnI	GATC	8 cut(s)	749, 1525, 1629, 1633, 2020, 2082, 2181, 2468
DpnII	GATC	8 cut(s)	747, 1523, 1627, 1631, 2018, 2080, 2179, 2466
DrdI	GACNNNNNNGTC	3 cut(s)	2091, 2557, 2693
DriI	GACNNNNNGTC	2 cut(s)	454, 773
DseDI	GACNNNNNNGTC	3 cut(s)	2091, 2557, 2693
EaeI	YGGCCR	2 cut(s)	228, 1304
Eam1104I	CTCTTC	6 cut(s)	227, 2028, 2203, 2239, 2361, 2436
Eam1105I	GACNNNNNGTC	2 cut(s)	454, 773
EarI	CTCTTC	6 cut(s)	227, 2028, 2203, 2239, 2361, 2436
Eco130I	CCWWGG	4 cut(s)	575, 882, 963, 1585
Eco24I	GRGCYC	3 cut(s)	252, 367, 1388
Eco47I	GGWCC	2 cut(s)	96, 878
Eco57I	CTGAAG	3 cut(s)	894, 2220, 2471
Eco88I	CYCGRG	1 cut(s)	2456
EcoO109I	RGGNCCY	2 cut(s)	800, 878
EcoRI	GAATTC	1 cut(s)	822
EcoRII	CCWGG	5 cut(s)	114, 367, 694, 1623, 1747
EcoT14I	CCWWGG	4 cut(s)	575, 882, 963, 1585
EcoT22I	ATGCAT	1 cut(s)	1176
EcoT38I	GRGCYC	3 cut(s)	252, 367, 1388
EgeI	GGCGCC	1 cut(s)	932
EheI	GGCGCC	1 cut(s)	932
ErhI	CCWWGG	4 cut(s)	575, 882, 963, 1585
Esp3I	CGTCTC	1 cut(s)	1623
FaeI	CATG	7 cut(s)	81, 479, 597, 1594, 1818, 2623, 2662
FalI	AAGNNNNNCTT	4 cut(s)	83, 115, 206, 238
FaqI	GGGAC	1 cut(s)	2586
FatI	CATG	7 cut(s)	77, 475, 593, 1590, 1814, 2619, 2658
FauNDI	CATATG	1 cut(s)	2203
Fnu4HI	GCNGC	4 cut(s)	720, 738, 1304, 2530
FokI	GGATG	9 cut(s)	281, 363, 1481, 1529, 1607, 2264, 2324, 2651, 2765
FriOI	GRGCYC	3 cut(s)	252, 367, 1388
Fsp4HI	GCNGC	4 cut(s)	720, 738, 1304, 2530
FspBI	CTAG	9 cut(s)	381, 576, 891, 1083, 1293, 1320, 1908, 2579, 2782
GlaI	GCGC	3 cut(s)	932, 1209, 1570
GluI	GCNGC	4 cut(s)	720, 738, 1304, 2530
GsuI	CTGGAG	1 cut(s)	2738
HaeII	RGCGCY	1 cut(s)	934
HaeIII	GGCC	4 cut(s)	230, 802, 1306, 1327
HapII	CCGG	1 cut(s)	422
HhaI	GCGC	3 cut(s)	933, 1210, 1571
Hin1I	GRCGYC	2 cut(s)	931, 2086
Hin1II	CATG	7 cut(s)	81, 479, 597, 1594, 1818, 2623, 2662
Hin6I	GCGC	3 cut(s)	931, 1208, 1569
HinP1I	GCGC	3 cut(s)	931, 1208, 1569
HincII	GTYRAC	4 cut(s)	1074, 1155, 1192, 2002
HindII	GTYRAC	4 cut(s)	1074, 1155, 1192, 2002
HindIII	AAGCTT	3 cut(s)	624, 671, 1799
HpaI	GTTAAC	1 cut(s)	2002
HpaII	CCGG	1 cut(s)	422
HphI	GGTGA	6 cut(s)	672, 1014, 1644, 1781, 2392, 2393
Hpy166II	GTNNAC	7 cut(s)	1074, 1155, 1192, 1557, 2002, 2485, 2650
Hpy8I	GTNNAC	7 cut(s)	1074, 1155, 1192, 1557, 2002, 2485, 2650
Hpy99I	CGWCG	1 cut(s)	2088
HpyAV	CCTTC	7 cut(s)	813, 869, 1056, 1102, 2018, 2563, 2722
HpyCH4III	ACNGT	3 cut(s)	1489, 1812, 2060
HpyCH4IV	ACGT	6 cut(s)	163, 1616, 1758, 1874, 2086, 2394
HpyF10VI	GCNNNNNNNGC	5 cut(s)	416, 541, 1040, 2139, 2237
HpySE526I	ACGT	6 cut(s)	163, 1616, 1758, 1874, 2086, 2394
Hsp92I	GRCGYC	2 cut(s)	931, 2086
Hsp92II	CATG	7 cut(s)	81, 479, 597, 1594, 1818, 2623, 2662
HspAI	GCGC	3 cut(s)	931, 1208, 1569
KasI	GGCGCC	1 cut(s)	930
KpnI	GGTACC	1 cut(s)	593
KspAI	GTTAAC	1 cut(s)	2002
Kzo9I	GATC	8 cut(s)	747, 1523, 1627, 1631, 2018, 2080, 2179, 2466
LguI	GCTCTTC	1 cut(s)	227
LmnI	GCTCC	3 cut(s)	124, 424, 780
Lsp1109I	GCAGC	1 cut(s)	749
LweI	GCATC	7 cut(s)	476, 872, 1762, 2058, 2242, 2374, 2495
MaeI	CTAG	9 cut(s)	381, 576, 891, 1083, 1293, 1320, 1908, 2579, 2782
MaeII	ACGT	6 cut(s)	163, 1616, 1758, 1874, 2086, 2394
MalI	GATC	8 cut(s)	749, 1525, 1629, 1633, 2020, 2082, 2181, 2468
MboI	GATC	8 cut(s)	747, 1523, 1627, 1631, 2018, 2080, 2179, 2466
MflI	RGATCY	1 cut(s)	2466
MhlI	GDGCHC	5 cut(s)	252, 367, 1388, 1559, 2666
Mly113I	GGCGCC	1 cut(s)	931
MlyI	GAGTC	5 cut(s)	443, 700, 1835, 2134, 2219
Mph1103I	ATGCAT	1 cut(s)	1176
MroXI	GAANNNNTTC	1 cut(s)	221
MslI	CAYNNNNRTG	2 cut(s)	530, 1467
MspA1I	CMGCKG	1 cut(s)	2259
MspCI	CTTAAG	1 cut(s)	1450
MspI	CCGG	1 cut(s)	422
MspR9I	CCNGG	6 cut(s)	116, 369, 422, 696, 1625, 1749
Mva1269I	GAATGC	1 cut(s)	1305
MvaI	CCWGG	5 cut(s)	116, 369, 696, 1625, 1749
MwoI	GCNNNNNNNGC	5 cut(s)	416, 541, 1040, 2139, 2237
NarI	GGCGCC	1 cut(s)	931
NciI	CCSGG	1 cut(s)	422
NdeI	CATATG	1 cut(s)	2203
NdeII	GATC	8 cut(s)	747, 1523, 1627, 1631, 2018, 2080, 2179, 2466
NheI	GCTAGC	2 cut(s)	1907, 2578
NlaIII	CATG	7 cut(s)	81, 479, 597, 1594, 1818, 2623, 2662
NmeAIII	GCCGAG	1 cut(s)	206
NmuCI	GTSAC	8 cut(s)	334, 678, 893, 923, 1650, 1660, 1855, 2144
NsiI	ATGCAT	1 cut(s)	1176
NspV	TTCGAA	1 cut(s)	2691
PaeR7I	CTCGAG	1 cut(s)	2456
PciSI	GCTCTTC	1 cut(s)	227
PctI	GAATGC	1 cut(s)	1305
PdmI	GAANNNNTTC	1 cut(s)	221
PfeI	GAWTC	6 cut(s)	110, 239, 398, 562, 977, 1691
PflMI	CCANNNNNTGG	2 cut(s)	1313, 1591
PfoI	TCCNGGA	1 cut(s)	1623
PkrI	GCNGC	4 cut(s)	721, 739, 1305, 2531
PleI	GAGTC	5 cut(s)	443, 699, 1834, 2133, 2219
PluTI	GGCGCC	1 cut(s)	934
PpsI	GAGTC	5 cut(s)	443, 699, 1834, 2133, 2219
PpuMI	RGGWCCY	1 cut(s)	878
PshBI	ATTAAT	1 cut(s)	386
Psp1406I	AACGTT	1 cut(s)	163
Psp5II	RGGWCCY	1 cut(s)	878
Psp6I	CCWGG	5 cut(s)	114, 367, 694, 1623, 1747
PspGI	CCWGG	5 cut(s)	114, 367, 694, 1623, 1747
PspPI	GGNCC	4 cut(s)	96, 800, 878, 1325
PspPPI	RGGWCCY	1 cut(s)	878
PspXI	VCTCGAGB	1 cut(s)	2456
PstI	CTGCAG	1 cut(s)	2499
PsuI	RGATCY	1 cut(s)	2466
RsaI	GTAC	6 cut(s)	66, 524, 591, 954, 2269, 2594
RsaNI	GTAC	6 cut(s)	65, 523, 590, 953, 2268, 2593
RseI	CAYNNNNRTG	2 cut(s)	530, 1467
SapI	GCTCTTC	1 cut(s)	227
SatI	GCNGC	4 cut(s)	720, 738, 1304, 2530
Sau3AI	GATC	8 cut(s)	747, 1523, 1627, 1631, 2018, 2080, 2179, 2466
Sau96I	GGNCC	4 cut(s)	96, 800, 878, 1325
SchI	GAGTC	5 cut(s)	443, 700, 1835, 2134, 2219
ScrFI	CCNGG	6 cut(s)	116, 369, 422, 696, 1625, 1749
SduI	GDGCHC	5 cut(s)	252, 367, 1388, 1559, 2666
SfaNI	GCATC	7 cut(s)	476, 872, 1762, 2058, 2242, 2374, 2495
SfcI	CTRYAG	3 cut(s)	123, 253, 2495
SfoI	GGCGCC	1 cut(s)	932
Sfr274I	CTCGAG	1 cut(s)	2456
SfuI	TTCGAA	1 cut(s)	2691
SinI	GGWCC	2 cut(s)	96, 878
SlaI	CTCGAG	1 cut(s)	2456
SmiMI	CAYNNNNRTG	2 cut(s)	530, 1467
SmlI	CTYRAG	8 cut(s)	817, 898, 1211, 1387, 1450, 1656, 2169, 2456
SmoI	CTYRAG	8 cut(s)	817, 898, 1211, 1387, 1450, 1656, 2169, 2456
SsiI	CCGC	4 cut(s)	719, 1303, 2259, 2530
SspDI	GGCGCC	1 cut(s)	930
SspMI	CTAG	9 cut(s)	381, 576, 891, 1083, 1293, 1320, 1908, 2579, 2782
StyD4I	CCNGG	6 cut(s)	114, 367, 420, 694, 1623, 1747
StyI	CCWWGG	4 cut(s)	575, 882, 963, 1585
TaaI	ACNGT	3 cut(s)	1489, 1812, 2060
TaiI	ACGT	6 cut(s)	166, 1619, 1761, 1877, 2089, 2397
TaqI	TCGA	8 cut(s)	766, 1630, 2083, 2128, 2223, 2457, 2691, 2697
TatI	WGTACW	3 cut(s)	64, 522, 2592
TauI	GCSGC	3 cut(s)	722, 1306, 2532
TfiI	GAWTC	6 cut(s)	110, 239, 398, 562, 977, 1691
TseFI	GTSAC	8 cut(s)	334, 678, 893, 923, 1650, 1660, 1855, 2144
TseI	GCWGC	1 cut(s)	737
Tsp45I	GTSAC	8 cut(s)	334, 678, 893, 923, 1650, 1660, 1855, 2144
TspGWI	ACGGA	1 cut(s)	1177
Van91I	CCANNNNNTGG	2 cut(s)	1313, 1591
Vha464I	CTTAAG	1 cut(s)	1450
VneI	GTGCAC	1 cut(s)	1555
VpaK11BI	GGWCC	2 cut(s)	96, 878
VspI	ATTAAT	1 cut(s)	386
XapI	RAATTY	5 cut(s)	822, 1729, 1937, 2075, 2514
XcmI	CCANNNNNNNNNTGG	1 cut(s)	970
XhoI	CTCGAG	1 cut(s)	2456
XmaJI	CCTAGG	1 cut(s)	575
XmnI	GAANNNNTTC	1 cut(s)	221
XspI	CTAG	9 cut(s)	381, 576, 891, 1083, 1293, 1320, 1908, 2579, 2782
ZraI	GACGTC	1 cut(s)	2087
Zsp2I	ATGCAT	1 cut(s)	1176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.