Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002897

Physical Location & Seq

Genomic Coordinates Reverse (-)

43348318 .. 43353133

Gene Structure 4816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00422460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGGCGGCCACGATCTGGAAATGGAGAAAGCTCGACTGTTAAGTTTGGCTCTTAATTTTGGGTTCGATGAAGAATCGGCCAACAAGTGCTTGGATCGTATGGTTGATCTCTACGTGGGGATTGATATGGAAGTGATTGGGAATCGAAATGGGTTTGTTTGGTTTTGTGCTTCTTTTGATTCCAATGTGAAGTTCATTATTGTGGGTGCTTTTCTGGATTTGAATGTGTCTGAGAAGATGAATTGTGTCTATTTTGGTGAAGATGGCCTAGATTTTATTACTGTGGAGCATTGCGGTGATGAGTTTCTTTCACAACTAGCTGAATCCGTTCAAGACACTGAAGAATGGGATGATTTACAAGCAATGGAGTCTGAAGCTTGTGGAGCCTTGAATAACATGTTTGGAAATGGTAATGAAGCAGGTAACGATGATAATGCTAGTGCCAAAACCAACATGCCAGAAGATTCACTCGAACGTCAAAAGTACCCAAATTTGTTGGTGCTGGATTCGAGTGATAGTGAAGACTTTGAATTAAGAACTCCATTAAGAAGAACAGTTGGATCCTTTTCTTCTTCATGTCCTGTTCAGAGCAATTCTGCCCTACCCCAGAATATGGAAAGATCAAGGGGTTGTGAAAGCACCATTAGTCAAGACAGAGTTCCATCAATTTCTAGTAAGAAGCAGTGTGTTCGAACAGCAAAGGATGAATTTAAGACTCTTACTTATGAAGAACTACAGTTGCTGGATGATGCTGAGCTGGCCAATGTTGTAATATTTGGTAATAGGACCTTTCGACCATTGCAGCATCAGGCTTGTAAAGCAGCCATGGCAAAGCGAGATTGCTTTATCCTAATGCCTACTGGAGGGGCTTCCTGCAACCCTGAAACCAGGTGTGACAATAGTTGTCTCTCCACTGCTTTCTCTTATTCAGGATCAGATAGTAACTCTGAACCTCAAGTTTGGAAAGATAAGCCGTCATGCAAGCTTCTGTATGTGACTCCTGAGAGAATTGCTGGAAGTTCATGTTTCCTTGAGGTTCTAGAATGCTTGCATTTGAAGGGGATGCTAGCAGGATTTGTTGTTGATGAAGCGCACTGCGTAAGCCAATGGGGACATGATTTTCGTCCAGATTACAAGGGATTAGGTTGTCTTAAGCAGAAATTCCGAGATGTTCCGGTGATGGCATTGACTGCTACTGCAACCCATCCAGTTCGTAAGGACATACTAAAAATTTTGAAAATTCCCCATGCTCTTGTCCTTGAAAGAAGCTTTGACAGACCCAATTTGAAATATGAAGTGATTGGTAAGGCAAAGGAAGCACTAAAGCAGCTTGGGCAACTATTGATGAGCCGTTTTCAGAACCAGTGTGGAATTATATACTGCCTCTCCAAAAGTGAATCCGTTGAGGTTTCAAAATTTCTGAATGAGAAATTTAAGATTAAGACAGCGCATTACCATGCCGGGATGGCAGCTCGCCAAAGAGTTGCTGTCCAAAAGAAATGGTACACAGGAGAGATCCAAATTGTATGTGCTACAATTGCTTTTGGGATGGGAATAGACAAGCCAGATGTTCGTTTTGTTATACACAACAGTCTATCCAAATCCATTGAAAGCTACTATCAAGAATCTGGAAGGGCTGGCAGAGATGATCTTCCTTCGGCATGCATTGTCCTGTACCAGAAGAAGGATTTTAGTCGGGTTGTATGTATGTTGCGAAACGGACAAGGATTTAAAAGTCAAAGCTTCAAGGCAGCTATGGCTCAAGCTCAGAAAATGCAAGAGTATTGTGAATTAAAGGCTCAGTGTCGGAGACAAATGTTGCTCAAACACTTCGGAGAGTCTTTTGATGAAAACGCCTGCAAAAATGGATCTAATCCTTGTGATAACTGTCTCAAGACTTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007154 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009266 GO:0009378 GO:0009409 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009987 GO:0009991 GO:0010035 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031668 GO:0032392 GO:0032508 GO:0033554 GO:0034641 GO:0042221 GO:0042623 GO:0042631 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0070417 GO:0070887 GO:0071103 GO:0071214 GO:0071229 GO:0071462 GO:0071496 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0104004 GO:0140097 GO:1901360 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko03440 ko03460 map03440 map03460

Pfam Domains

Protein Families

DEAD Helicase_C RecQ_Zn_bind

Protein Analysis

634

Amino Acids

70.95

Weight (kDa)

5.86

Isoelectric Point (pI)

44.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	304 - 404	1.1e-07	DEAD/DEAH box helicase
Helicase_C	PF00271	441 - 548	4.1e-19	Helicase conserved C-terminal domain
RecQ_Zn_bind	PF16124	562 - 631	1.7e-14	RecQ zinc-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05740 AT3G05740
fragaria_vesca	FvH4_6g07200 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210
malus_domestica	MD04G1195500.v1.1 MD12G1207600.v1.1 MD12G1207700.v1.1 MD12G1207800.v1.1
prunus_persica	Prupe.6G315200_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1
pyrus_communis	pycom04g17270 pycom12g19520 pycom12g19530
rosa_chinensis	RchiOBHm_Chr3g0456831 RchiOBHm_Chr3g0456841
rosa_laevigata	RLG00000025275
rosa_multiflora	Rmu_co8434835.1_g000001 Rmu_sc0000133.1_g000020
rosa_roxburghii	Rroxscaffold_6G00422450 Rroxscaffold_6G00422460
rosa_rugosa	Rorug03G0016100 Rorug03G0016200 Rorug03G0016300.1
rosa_samantha	Rh3AG076400 Rh3AG076600 Rh3BG078200 Rh3BG078400 Rh3CG078000 Rh3CG078200 Rh3DG080100 Rh3DG080200
rosa_wichuraiana	Rw3G006560 Rw3G006570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	410
AccB7I	CCANNNNNTGG	2 cut(s)	16, 613
AciI	CCGC	2 cut(s)	6, 294
AclWI	GGATC	6 cut(s)	102, 555, 568, 940, 1510, 1876
AcoI	YGGCCR	3 cut(s)	7, 78, 759
AcsI	RAATTY	7 cut(s)	490, 707, 1160, 1230, 1239, 1415, 1430
AcuI	CTGAAG	2 cut(s)	360, 393
AfaI	GTAC	3 cut(s)	485, 1505, 1676
AfiI	CCNNNNNNNGG	4 cut(s)	16, 613, 863, 1684
AflII	CTTAAG	1 cut(s)	1151
AflIII	ACRYGT	1 cut(s)	396
AjnI	CCWGG	1 cut(s)	887
AjuI	GAANNNNNNNTTGG	2 cut(s)	176, 208
Alw26I	GTCTC	3 cut(s)	911, 1804, 1895
AlwI	GGATC	6 cut(s)	102, 555, 568, 940, 1510, 1876
AlwNI	CAGNNNCTG	1 cut(s)	742
AoxI	GGCC	4 cut(s)	7, 78, 265, 759
ApeKI	GCWGC	5 cut(s)	802, 821, 1327, 1469, 1751
ApoI	RAATTY	7 cut(s)	490, 707, 1160, 1230, 1239, 1415, 1430
ArsI	GACNNNNNNTTYG	2 cut(s)	1104, 1136
Asp700I	GAANNNNTTC	1 cut(s)	327
AspLEI	GCGC	2 cut(s)	1093, 1450
AspS9I	GGNCC	1 cut(s)	786
AsuC2I	CCSGG	1 cut(s)	1462
AsuHPI	GGTGA	3 cut(s)	269, 308, 1189
AsuII	TTCGAA	1 cut(s)	691
AsuNHI	GCTAGC	1 cut(s)	1066
AvaII	GGWCC	1 cut(s)	786
BalI	TGGCCA	1 cut(s)	761
BamHI	GGATCC	1 cut(s)	560
BbsI	GAAGAC	1 cut(s)	528
BbvI	GCAGC	5 cut(s)	814, 833, 1339, 1481, 1763
BccI	CCATC	6 cut(s)	257, 670, 1174, 1212, 1459, 1543
BceAI	ACGGC	2 cut(s)	958, 1335
BcgI	CGANNNNNNTGC	4 cut(s)	416, 450, 671, 705
BciT130I	CCWGG	1 cut(s)	889
BcnI	CCSGG	1 cut(s)	1462
BcoDI	GTCTC	3 cut(s)	911, 1804, 1895
BfaI	CTAG	7 cut(s)	269, 317, 438, 672, 1040, 1067, 1903
BfmI	CTRYAG	1 cut(s)	734
BfrI	CTTAAG	1 cut(s)	1151
BfuAI	ACCTGC	1 cut(s)	410
BglI	GCCNNNNNGGC	1 cut(s)	1466
BisI	GCNGC	6 cut(s)	7, 803, 822, 1328, 1470, 1752
BlpI	GCTNAGC	1 cut(s)	753
BlsI	GCNGC	6 cut(s)	8, 804, 823, 1329, 1471, 1753
Bme1390I	CCNGG	2 cut(s)	889, 1462
Bme18I	GGWCC	1 cut(s)	786
BmgT120I	GGNCC	1 cut(s)	786
BmiI	GGNNCC	2 cut(s)	385, 562
BmrFI	CCNGG	2 cut(s)	889, 1462
BmsI	GCATC	3 cut(s)	739, 814, 1053
BmtI	GCTAGC	1 cut(s)	1070
BpiI	GAAGAC	1 cut(s)	528
BpmI	CTGGAG	1 cut(s)	882
Bpu1102I	GCTNAGC	1 cut(s)	753
Bpu14I	TTCGAA	1 cut(s)	691
BpuEI	CTTGAG	4 cut(s)	939, 1052, 1746, 1877
BpuMI	CCSGG	1 cut(s)	1462
BsaAI	YACGTR	1 cut(s)	115
BsaJI	CCNNGG	1 cut(s)	825
BsaWI	WCCGGW	1 cut(s)	1174
BsaXI	ACNNNNNCTCC	2 cut(s)	1370, 1400
Bsc4I	CCNNNNNNNGG	4 cut(s)	16, 613, 863, 1684
Bse1I	ACTGG	3 cut(s)	865, 1208, 1363
Bse3DI	GCAATG	3 cut(s)	289, 369, 797
BseBI	CCWGG	1 cut(s)	889
BseDI	CCNNGG	1 cut(s)	825
BseGI	GGATG	7 cut(s)	355, 709, 751, 1068, 1204, 1470, 1554
BseLI	CCNNNNNNNGG	4 cut(s)	16, 613, 863, 1684
BseMI	GCAATG	3 cut(s)	289, 369, 797
BseMII	CTCAG	5 cut(s)	222, 744, 993, 1781, 1814
BseNI	ACTGG	3 cut(s)	865, 1208, 1363
BseXI	GCAGC	5 cut(s)	814, 833, 1339, 1481, 1763
BshFI	GGCC	4 cut(s)	9, 80, 267, 761
BsiSI	CCGG	2 cut(s)	1175, 1461
BslFI	GGGAC	1 cut(s)	1125
BslI	CCNNNNNNNGG	4 cut(s)	16, 613, 863, 1684
BsmAI	GTCTC	3 cut(s)	911, 1804, 1895
BsmFI	GGGAC	1 cut(s)	1125
BsmI	GAATGC	1 cut(s)	1049
BsnI	GGCC	4 cut(s)	9, 80, 267, 761
Bsp119I	TTCGAA	1 cut(s)	691
Bsp143I	GATC	9 cut(s)	13, 94, 106, 560, 620, 932, 1515, 1648, 1868
Bsp1720I	GCTNAGC	1 cut(s)	753
Bsp19I	CCATGG	1 cut(s)	825
BspACI	CCGC	2 cut(s)	6, 294
BspANI	GGCC	4 cut(s)	9, 80, 267, 761
BspCNI	CTCAG	5 cut(s)	223, 745, 994, 1780, 1813
BspLI	GGNNCC	2 cut(s)	385, 562
BspMI	ACCTGC	1 cut(s)	410
BspOI	GCTAGC	1 cut(s)	1070
BspPI	GGATC	6 cut(s)	102, 555, 568, 940, 1510, 1876
BspT104I	TTCGAA	1 cut(s)	691
BspTI	CTTAAG	1 cut(s)	1151
BsrDI	GCAATG	3 cut(s)	289, 369, 797
BsrI	ACTGG	3 cut(s)	865, 1208, 1363
BssECI	CCNNGG	1 cut(s)	825
BssMI	GATC	9 cut(s)	13, 94, 106, 560, 620, 932, 1515, 1648, 1868
BssT1I	CCWWGG	1 cut(s)	825
Bst2UI	CCWGG	1 cut(s)	889
Bst4CI	ACNGT	6 cut(s)	39, 283, 556, 738, 1592, 1889
BstAFI	CTTAAG	1 cut(s)	1151
BstAPI	GCANNNNNTGC	1 cut(s)	1190
BstBAI	YACGTR	1 cut(s)	115
BstBI	TTCGAA	1 cut(s)	691
BstC8I	GCNNGC	8 cut(s)	759, 983, 1049, 1068, 1474, 1639, 1663, 1858
BstDEI	CTNAG	5 cut(s)	231, 753, 1002, 1767, 1800
BstDSI	CCRYGG	1 cut(s)	825
BstENI	CCTNNNNNAGG	1 cut(s)	861
BstF5I	GGATG	7 cut(s)	355, 709, 751, 1068, 1204, 1470, 1554
BstHHI	GCGC	2 cut(s)	1093, 1450
BstKTI	GATC	9 cut(s)	16, 97, 109, 563, 623, 935, 1518, 1651, 1871
BstMAI	GTCTC	3 cut(s)	911, 1804, 1895
BstMBI	GATC	9 cut(s)	13, 94, 106, 560, 620, 932, 1515, 1648, 1868
BstNI	CCWGG	1 cut(s)	889
BstNSI	RCATGY	3 cut(s)	400, 457, 1665
BstSCI	CCNGG	2 cut(s)	887, 1460
BstSFI	CTRYAG	1 cut(s)	734
BstV1I	GCAGC	5 cut(s)	814, 833, 1339, 1481, 1763
BstV2I	GAAGAC	1 cut(s)	528
BstX2I	RGATCY	3 cut(s)	560, 1515, 1868
BstYI	RGATCY	3 cut(s)	560, 1515, 1868
BsuRI	GGCC	4 cut(s)	9, 80, 267, 761
BtgI	CCRYGG	1 cut(s)	825
BtsCI	GGATG	7 cut(s)	355, 709, 751, 1068, 1204, 1470, 1554
BtsI	GCAGTG	3 cut(s)	689, 912, 1093
BtsIMutI	CAGTG	6 cut(s)	336, 689, 912, 1093, 1370, 1808
BveI	ACCTGC	1 cut(s)	410
Cac8I	GCNNGC	8 cut(s)	759, 983, 1049, 1068, 1474, 1639, 1663, 1858
CaiI	CAGNNNCTG	1 cut(s)	742
CfoI	GCGC	2 cut(s)	1093, 1450
Cfr13I	GGNCC	1 cut(s)	786
CsiI	ACCWGGT	1 cut(s)	887
Csp6I	GTAC	3 cut(s)	484, 1504, 1675
CviQI	GTAC	3 cut(s)	484, 1504, 1675
DdeI	CTNAG	5 cut(s)	231, 753, 1002, 1767, 1800
DpnI	GATC	9 cut(s)	15, 96, 108, 562, 622, 934, 1517, 1650, 1870
DpnII	GATC	9 cut(s)	13, 94, 106, 560, 620, 932, 1515, 1648, 1868
DraI	TTTAAA	1 cut(s)	1732
EaeI	YGGCCR	3 cut(s)	7, 78, 759
Eco130I	CCWWGG	1 cut(s)	825
Eco47I	GGWCC	1 cut(s)	786
Eco57I	CTGAAG	2 cut(s)	360, 393
EcoNI	CCTNNNNNAGG	1 cut(s)	861
EcoO109I	RGGNCCY	1 cut(s)	786
EcoRII	CCWGG	1 cut(s)	887
EcoT14I	CCWWGG	1 cut(s)	825
EcoT22I	ATGCAT	1 cut(s)	1667
ErhI	CCWWGG	1 cut(s)	825
FaqI	GGGAC	1 cut(s)	1125
Fnu4HI	GCNGC	6 cut(s)	7, 803, 822, 1328, 1470, 1752
FokI	GGATG	7 cut(s)	362, 716, 758, 1075, 1191, 1477, 1561
Fsp4HI	GCNGC	6 cut(s)	7, 803, 822, 1328, 1470, 1752
FspBI	CTAG	7 cut(s)	269, 317, 438, 672, 1040, 1067, 1903
GlaI	GCGC	2 cut(s)	1092, 1449
GluI	GCNGC	6 cut(s)	7, 803, 822, 1328, 1470, 1752
GsuI	CTGGAG	1 cut(s)	882
HaeIII	GGCC	4 cut(s)	9, 80, 267, 761
HapII	CCGG	2 cut(s)	1175, 1461
HhaI	GCGC	2 cut(s)	1093, 1450
Hin6I	GCGC	2 cut(s)	1091, 1448
HinP1I	GCGC	2 cut(s)	1091, 1448
HindIII	AAGCTT	4 cut(s)	375, 983, 1267, 1741
HpaII	CCGG	2 cut(s)	1175, 1461
HphI	GGTGA	3 cut(s)	269, 308, 1189
Hpy166II	GTNNAC	1 cut(s)	1506
Hpy8I	GTNNAC	1 cut(s)	1506
HpyAV	CCTTC	4 cut(s)	1051, 1626, 1665, 1678
HpyCH4III	ACNGT	6 cut(s)	39, 283, 556, 738, 1592, 1889
HpyCH4IV	ACGT	2 cut(s)	114, 475
HpyCH4V	TGCA	8 cut(s)	802, 876, 981, 1051, 1199, 1665, 1777, 1860
HpyF3I	CTNAG	5 cut(s)	231, 753, 1002, 1767, 1800
HpySE526I	ACGT	2 cut(s)	114, 475
HspAI	GCGC	2 cut(s)	1091, 1448
Kzo9I	GATC	9 cut(s)	13, 94, 106, 560, 620, 932, 1515, 1648, 1868
LmnI	GCTCC	2 cut(s)	286, 383
Lsp1109I	GCAGC	5 cut(s)	814, 833, 1339, 1481, 1763
LweI	GCATC	3 cut(s)	739, 814, 1053
MabI	ACCWGGT	1 cut(s)	887
MaeI	CTAG	7 cut(s)	269, 317, 438, 672, 1040, 1067, 1903
MaeII	ACGT	2 cut(s)	114, 475
MaeIII	GTNAC	4 cut(s)	422, 893, 941, 994
MalI	GATC	9 cut(s)	15, 96, 108, 562, 622, 934, 1517, 1650, 1870
MboI	GATC	9 cut(s)	13, 94, 106, 560, 620, 932, 1515, 1648, 1868
MfeI	CAATTG	1 cut(s)	1536
MflI	RGATCY	3 cut(s)	560, 1515, 1868
MlsI	TGGCCA	1 cut(s)	761
MluNI	TGGCCA	1 cut(s)	761
MlyI	GAGTC	4 cut(s)	377, 709, 991, 1847
MmeI	TCCRAC	2 cut(s)	538, 1787
MnlI	CCTC	5 cut(s)	857, 963, 1027, 1394, 1399
Mox20I	TGGCCA	1 cut(s)	761
Mph1103I	ATGCAT	1 cut(s)	1667
MroXI	GAANNNNTTC	1 cut(s)	327
MscI	TGGCCA	1 cut(s)	761
MslI	CAYNNNNRTG	3 cut(s)	200, 294, 1455
Msp20I	TGGCCA	1 cut(s)	761
MspCI	CTTAAG	1 cut(s)	1151
MspI	CCGG	2 cut(s)	1175, 1461
MspR9I	CCNGG	2 cut(s)	889, 1462
MunI	CAATTG	1 cut(s)	1536
Mva1269I	GAATGC	1 cut(s)	1049
MvaI	CCWGG	1 cut(s)	889
NciI	CCSGG	1 cut(s)	1462
NcoI	CCATGG	1 cut(s)	825
NdeII	GATC	9 cut(s)	13, 94, 106, 560, 620, 932, 1515, 1648, 1868
NheI	GCTAGC	1 cut(s)	1066
NlaIV	GGNNCC	2 cut(s)	385, 562
NmuCI	GTSAC	2 cut(s)	893, 994
NsiI	ATGCAT	1 cut(s)	1667
NspI	RCATGY	3 cut(s)	400, 457, 1665
NspV	TTCGAA	1 cut(s)	691
PaeI	GCATGC	1 cut(s)	1665
PciI	ACATGT	1 cut(s)	396
PctI	GAATGC	1 cut(s)	1049
PdmI	GAANNNNTTC	1 cut(s)	327
PfeI	GAWTC	8 cut(s)	74, 142, 179, 323, 464, 506, 1397, 1625
PflMI	CCANNNNNTGG	2 cut(s)	16, 613
PkrI	GCNGC	6 cut(s)	8, 804, 823, 1329, 1471, 1753
PleI	GAGTC	4 cut(s)	376, 709, 991, 1846
PpsI	GAGTC	4 cut(s)	376, 709, 991, 1846
Ppu21I	YACGTR	1 cut(s)	115
PpuMI	RGGWCCY	1 cut(s)	786
PscI	ACATGT	1 cut(s)	396
Psp5II	RGGWCCY	1 cut(s)	786
Psp6I	CCWGG	1 cut(s)	887
PspGI	CCWGG	1 cut(s)	887
PspN4I	GGNNCC	2 cut(s)	385, 562
PspPI	GGNCC	1 cut(s)	786
PspPPI	RGGWCCY	1 cut(s)	786
PstNI	CAGNNNCTG	1 cut(s)	742
PsuI	RGATCY	3 cut(s)	560, 1515, 1868
RsaI	GTAC	3 cut(s)	485, 1505, 1676
RsaNI	GTAC	3 cut(s)	484, 1504, 1675
RseI	CAYNNNNRTG	3 cut(s)	200, 294, 1455
SatI	GCNGC	6 cut(s)	7, 803, 822, 1328, 1470, 1752
Sau3AI	GATC	9 cut(s)	13, 94, 106, 560, 620, 932, 1515, 1648, 1868
Sau96I	GGNCC	1 cut(s)	786
SchI	GAGTC	4 cut(s)	377, 709, 991, 1847
ScrFI	CCNGG	2 cut(s)	889, 1462
SexAI	ACCWGGT	1 cut(s)	887
SfaNI	GCATC	3 cut(s)	739, 814, 1053
SfcI	CTRYAG	1 cut(s)	734
SfuI	TTCGAA	1 cut(s)	691
SinI	GGWCC	1 cut(s)	786
SmiMI	CAYNNNNRTG	3 cut(s)	200, 294, 1455
SmlI	CTYRAG	5 cut(s)	954, 1031, 1151, 1761, 1892
SmoI	CTYRAG	5 cut(s)	954, 1031, 1151, 1761, 1892
SphI	GCATGC	1 cut(s)	1665
SsiI	CCGC	2 cut(s)	6, 294
SspI	AATATT	1 cut(s)	774
SspMI	CTAG	7 cut(s)	269, 317, 438, 672, 1040, 1067, 1903
StyD4I	CCNGG	2 cut(s)	887, 1460
StyI	CCWWGG	1 cut(s)	825
TaaI	ACNGT	6 cut(s)	39, 283, 556, 738, 1592, 1889
TaiI	ACGT	2 cut(s)	117, 478
TaqI	TCGA	7 cut(s)	34, 66, 145, 471, 509, 691, 793
TauI	GCSGC	1 cut(s)	9
TfiI	GAWTC	8 cut(s)	74, 142, 179, 323, 464, 506, 1397, 1625
TscAI	CASTG	6 cut(s)	343, 689, 919, 1100, 1370, 1808
TseFI	GTSAC	2 cut(s)	893, 994
TseI	GCWGC	5 cut(s)	802, 821, 1327, 1469, 1751
Tsp45I	GTSAC	2 cut(s)	893, 994
TspGWI	ACGGA	3 cut(s)	316, 1390, 1734
TspRI	CASTG	6 cut(s)	343, 689, 919, 1100, 1370, 1808
Van91I	CCANNNNNTGG	2 cut(s)	16, 613
Vha464I	CTTAAG	1 cut(s)	1151
VpaK11BI	GGWCC	1 cut(s)	786
XagI	CCTNNNNNAGG	1 cut(s)	861
XapI	RAATTY	7 cut(s)	490, 707, 1160, 1230, 1239, 1415, 1430
XbaI	TCTAGA	1 cut(s)	1039
XceI	RCATGY	3 cut(s)	400, 457, 1665
XcmI	CCANNNNNNNNNTGG	1 cut(s)	88
XmnI	GAANNNNTTC	1 cut(s)	327
XspI	CTAG	7 cut(s)	269, 317, 438, 672, 1040, 1067, 1903
Zsp2I	ATGCAT	1 cut(s)	1667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.