Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0002897

Physical Location & Seq

Genomic Coordinates Reverse (-)

28742221 .. 28747441

Gene Structure 5221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1207600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2703 bp

ATGGAGGTTGAGAAGAAACGTTCGAAAGGGGGCTTTCTTAACTTGTTTGATTGGAATGGAAAATCTCGGAAGAAGCTCTTCTCGGCCAGCTCTGAATCATCGGGATTAAAGCAAGGAAAAGAAAATGTGGAGAGTTTCCAGAAGTCAGGGCTCTATAGGGTAGAGGTGGATGAAAGTGGAACTGGAACCACTTCAAGTAATAAGGGAAGTGGTGATTGGAATTGTGCTTCATCAGTGACTAGTGATGAGGGATGTAGGGCTAGAGCCCCTGGTGTAGTTGCTAGATTAATGGGTCTGGATTCATTGCCTGCTTCAACTGCCCCTGACCCCGAGCTATCTTCTGCCCTACTCTTTGATTCCCAATCACTTAAAGCATCTCAACATGAGAGGAGCGGTCGTAATTTGTGGAGTGATTTTTATGCCACAGAGTACATAAATGTGCCAAAGAAGCTGGATAGGTTTTCTTGGAATCTTGTAGAGCCTAGGACACAGGGGGTGCCGAGCCACCCAATTGAGAGATTTCAAACTGAAGCTTTGCCTCCAAAGTCAGCTAAGTCAATTCCAGTTACTCACCATAAGCTTTTGTCGCCTATCAAGAGTCCTGGCTTCATTCCACCAAAAAATGCAGCTTATGTAATGGAGGCGGCCTCAAAGATCATTGAGGCAAGTCCTCGAGCATCTGCCAGGAGCAAAGTGTCATCTGTAGGGCCTTCTTCGATTCCCTTGAGAATTCGGGATTTGAAAGAGAAGATGGAAGCTGTGCATAAAGCATCAGGACCTGAAAGACCCAAGGAAGCTAGTGACTTCAGGTATATGAAAGGACTGCCTAGTGACAGGCGCCATAACGGGTCAGATAATGTACCAGTAGCCAAGGCTTCTGTGGATTCAGAAAAACAAAGTTACAGGGATGTGAGGAATAAGGGCAAATCAGTATCCCTTGCAGAACAAGCAAAGGTCAATATTCAGAAAAGGGAGGGGTCGACTTCTTGTCGTAATAGAAGTTTTATGAACCAGAAGGAACAGAATGAGGTCAAACAAAATCAGTTTTCCAAGAGCAAGTCAAGTACACAAAGATCTACGCATAAGAGAACTTCCGTTGAGAGCGCCAGAACTGCGCTCAAGCAGAATAACCAGAAGCAGAATTGTGTATCTAACAGAGATAAAATGACTTCAAAAAGTATGGTTCCTAATCAGCCTACTAGAAGAATGCAGCCACCTAATGGCTCTACTGGGCCAATGAAAACTGTGAATAAGACTATTGTAAGCTCTGAGATTGGATCTGGAAAGTTGGGCTCAAGGGCGACTGCTAATGGAAAAGAGTTTCCGTTATCCACAAGAAAGATTGTTTCTGGAAAGGTAAGGTCTGTTCATCAGGATGATCATTCAGAAGAAACTGTTTCCGATGATTCATATATCGGTGGAGATGAAAAGTCAGTGAAATGTAATTTTTCAAGGAACGGGTGTTCCAATTTGGGCGCAGATAATAGGAACCAAGGCATGGATGTTATTTCATTTACATTCACGTCTCCCCTGAAAAGATCATTCTCTGAATTGCAGTCACCTGGTCAACTCACAAGTATAAATAACAGCTTTTATATTGATTCTTCTGGTCACAACAATCAGCAGTTCTATCCCGAGAATTTCACATTATCTTCTCCTGGGTTGAACGTGATTGGTGGTGATGCTTTGAGTGTCCTTCTGGAACAAAAGCTTCAAGAACTTTCATGTAAAGTTGAGTCATCTCAACGCAACCAATCCAGTGAAGTGACTTCTGGTACTTCTACGTCTTGCTTGCAAGATATGGTTTCCAGTGTGGCAAGCACTACATCAAGAGGCAAGGGGTTCAAAGTTGGTTTAACCAAAGATAAAACTGACAGCACAGACGACTATGATTGCTTGTCAGTTGAGGTTAACCAGCAGGGGCAGGGATCAGAAGGGGTGGAAGAGTGTAGCAGTAGCAGTAGAAACATTACAACTGGAAAAGAATTTGATCGACGTCGTAGTCCAGTTTCAATTTTTGAACACTCAGTTGAGAGTCGAACCTGCACAGATAACAGAAGTAGCGCCAATGGCAGTGACAGTGAGAGATGTTCATTGGCTCAACTTCAAGATCAAGGCAGTTCACTCTCTTCATATGGTGTTTCAGATTTCCTCGACTCAGCCTCTTCAGCTTCTAGAGGGGATGCCAGCGGAAAGAGTACGACTATGATATCAGGTTCGCATTCAAATGACTGGGAACTGGAATATGTGAGATACGTCCTTAGCAATGTAGATCTAGAGATGGAAGATTTCGCCTTGGGTGATGCTCAACATGTCATCACCCCAAGTCTCTTTGAGCATTTGGAGAATCAAGAACAAGAAGAGTATCCGAAGGTCGAGCAGAAGATTGTGTTTGACTGCGTAAATGAAGCCCTGCAGTTCAGATGCAAGCAAATATTTGTGGGAAGCCGCAAAGCGTGGGATAGATTGACCGCATTGTCTCAGAGGAAGGGACGATTAGCTGAGGAGTTGCACAAAGAGATTTCGGGTTGGAAAAACATGAGAGAGCTGATGGGGGATGAGCTTGTGGACAAGGATATGAGCACGCAGCGTGGAAGATGGCTCGACTTTGAAGTTGAAGTGTTTGAGGAGGGTCTAGAGATTGAGAAGGGGGTACTAGATTGTCTGGTGGATGAGTTGGTGTCTGATTTTTTGAACTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

901

Amino Acids

99.29

Weight (kDa)

7.8

Isoelectric Point (pI)

53.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	77 - 106	4.1e-14	DUF761-associated sequence motif
DUF4378	PF14309	746 - 892	1.3e-32	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002897)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G05740 AT3G05740
fragaria_vesca	FvH4_6g07200 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210 FvH4_6g07210
malus_domestica	MD04G1195500.v1.1 MD12G1207600.v1.1 MD12G1207700.v1.1 MD12G1207800.v1.1
prunus_persica	Prupe.6G315200_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1 Prupe.6G315300_v2.0.a1
pyrus_communis	pycom04g17270 pycom12g19520 pycom12g19530
rosa_chinensis	RchiOBHm_Chr3g0456831 RchiOBHm_Chr3g0456841
rosa_laevigata	RLG00000025275
rosa_multiflora	Rmu_co8434835.1_g000001 Rmu_sc0000133.1_g000020
rosa_roxburghii	Rroxscaffold_6G00422450 Rroxscaffold_6G00422460
rosa_rugosa	Rorug03G0016100 Rorug03G0016200 Rorug03G0016300.1
rosa_samantha	Rh3AG076400 Rh3AG076600 Rh3BG078200 Rh3BG078400 Rh3CG078000 Rh3CG078200 Rh3DG080100 Rh3DG080200
rosa_wichuraiana	Rw3G006560 Rw3G006570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	2001, 2476
AatII	GACGTC	1 cut(s)	1999
Acc36I	ACCTGC	1 cut(s)	2051
AccB1I	GGYRCC	2 cut(s)	496, 837
AccB7I	CCANNNNNTGG	2 cut(s)	1220, 1498
AccBSI	CCGCTC	1 cut(s)	393
AccI	GTMKAC	1 cut(s)	980
AciI	CCGC	5 cut(s)	393, 644, 2190, 2449, 2472
AclI	AACGTT	1 cut(s)	19
AclWI	GGATC	2 cut(s)	1285, 1936
AcoI	YGGCCR	1 cut(s)	84
AcsI	RAATTY	3 cut(s)	729, 1639, 1985
AcuI	CTGAAG	3 cut(s)	549, 790, 2151
AcyI	GRCGYC	2 cut(s)	838, 1996
AfaI	GTAC	6 cut(s)	431, 861, 1066, 1777, 2200, 2655
AfiI	CCNNNNNNNGG	2 cut(s)	1220, 1498
AflIII	ACRYGT	1 cut(s)	2311
AhdI	GACNNNNNGTC	1 cut(s)	987
AhlI	ACTAGT	1 cut(s)	239
AjiI	CACGTC	1 cut(s)	1524
AjnI	CCWGG	5 cut(s)	268, 601, 683, 1561, 1657
AjuI	GAANNNNNNNTTGG	2 cut(s)	199, 231
AloI	GAACNNNNNNTCC	4 cut(s)	1447, 1448, 1479, 1480
Alw21I	GWGCWC	1 cut(s)	2585
Alw26I	GTCTC	3 cut(s)	1530, 2333, 2484
AlwI	GGATC	2 cut(s)	1285, 1936
AlwNI	CAGNNNCTG	1 cut(s)	779
Ama87I	CYCGRG	3 cut(s)	329, 672, 1634
AoxI	GGCC	4 cut(s)	84, 645, 707, 1232
ApeKI	GCWGC	3 cut(s)	626, 1210, 2587
ApoI	RAATTY	3 cut(s)	729, 1639, 1985
AseI	ATTAAT	1 cut(s)	287
Asp700I	GAANNNNTTC	2 cut(s)	77, 190
AspA2I	CCTAGG	1 cut(s)	482
AspLEI	GCGC	5 cut(s)	840, 1106, 1117, 1478, 2066
AspS9I	GGNCC	3 cut(s)	707, 776, 1232
AsuHPI	GGTGA	6 cut(s)	224, 563, 1551, 1691, 2311, 2312
AsuII	TTCGAA	1 cut(s)	23
AvaI	CYCGRG	3 cut(s)	329, 672, 1634
AvaII	GGWCC	1 cut(s)	776
AvrII	CCTAGG	1 cut(s)	482
BanI	GGYRCC	2 cut(s)	496, 837
BanII	GRGCYC	3 cut(s)	153, 268, 1295
Bbv12I	GWGCWC	1 cut(s)	2585
BbvCI	CCTCAGC	1 cut(s)	2502
BbvI	GCAGC	3 cut(s)	638, 1222, 2599
BccI	CCATC	4 cut(s)	745, 2275, 2545, 2592
BciT130I	CCWGG	5 cut(s)	270, 603, 685, 1563, 1659
BciVI	GTATCC	2 cut(s)	943, 2376
BclI	TGATCA	1 cut(s)	1378
BcoDI	GTCTC	3 cut(s)	1530, 2333, 2484
BcuI	ACTAGT	1 cut(s)	239
BfmI	CTRYAG	3 cut(s)	154, 702, 2414
BfoI	RGCGCY	3 cut(s)	841, 1107, 2067
BfuAI	ACCTGC	1 cut(s)	2051
BfuI	GTATCC	2 cut(s)	943, 2376
BglII	AGATCT	2 cut(s)	1073, 2272
BisI	GCNGC	5 cut(s)	627, 645, 1211, 2449, 2588
BlnI	CCTAGG	1 cut(s)	482
BlsI	GCNGC	5 cut(s)	628, 646, 1212, 2450, 2589
Bme1390I	CCNGG	5 cut(s)	270, 603, 685, 1563, 1659
Bme18I	GGWCC	1 cut(s)	776
BmeRI	GACNNNNNGTC	1 cut(s)	987
BmeT110I	CYCGRG	3 cut(s)	329, 672, 1634
BmgBI	CACGTC	1 cut(s)	1524
BmgT120I	GGNCC	3 cut(s)	707, 776, 1232
BmiI	GGNNCC	5 cut(s)	187, 498, 839, 1185, 1490
BmrFI	CCNGG	5 cut(s)	270, 603, 685, 1563, 1659
BmrI	ACTGGG	2 cut(s)	1239, 2242
BmsI	GCATC	7 cut(s)	383, 686, 779, 1672, 2173, 2293, 2414
BmuI	ACTGGG	2 cut(s)	1239, 2242
BplI	GAGNNNNNCTC	2 cut(s)	632, 664
Bpu10I	CCTNAGC	2 cut(s)	2261, 2502
Bpu14I	TTCGAA	1 cut(s)	23
BpuEI	CTTGAG	3 cut(s)	745, 1103, 1279
BsaHI	GRCGYC	2 cut(s)	838, 1996
BsaJI	CCNNGG	7 cut(s)	268, 482, 789, 870, 1492, 1658, 2295
BsaXI	ACNNNNNCTCC	2 cut(s)	382, 412
Bsc4I	CCNNNNNNNGG	2 cut(s)	1220, 1498
Bse3DI	GCAATG	2 cut(s)	302, 2272
BseBI	CCWGG	5 cut(s)	270, 603, 685, 1563, 1659
BseDI	CCNNGG	7 cut(s)	268, 482, 789, 870, 1492, 1658, 2295
BseGI	GGATG	8 cut(s)	175, 257, 913, 1381, 1507, 2188, 2563, 2677
BseLI	CCNNNNNNNGG	2 cut(s)	1220, 1498
BseMI	GCAATG	2 cut(s)	302, 2272
BseMII	CTCAG	5 cut(s)	1260, 2040, 2172, 2493, 2495
BseRI	GAGGAG	3 cut(s)	403, 2519, 2642
BseXI	GCAGC	3 cut(s)	638, 1222, 2599
BsgI	GTGCAG	1 cut(s)	2029
Bsh1285I	CGRYCG	1 cut(s)	397
BshFI	GGCC	4 cut(s)	86, 647, 709, 1234
BshNI	GGYRCC	2 cut(s)	496, 837
BsiEI	CGRYCG	1 cut(s)	397
BsiHKAI	GWGCWC	1 cut(s)	2585
BsiHKCI	CYCGRG	3 cut(s)	329, 672, 1634
BslFI	GGGAC	1 cut(s)	2505
BslI	CCNNNNNNNGG	2 cut(s)	1220, 1498
BsmAI	GTCTC	3 cut(s)	1530, 2333, 2484
BsmBI	CGTCTC	1 cut(s)	1530
BsmFI	GGGAC	1 cut(s)	2505
BsmI	GAATGC	2 cut(s)	1212, 2221
BsnI	GGCC	4 cut(s)	86, 647, 709, 1234
BsoBI	CYCGRG	3 cut(s)	329, 672, 1634
Bsp119I	TTCGAA	1 cut(s)	23
Bsp1286I	GDGCHC	4 cut(s)	153, 268, 1295, 2585
Bsp143I	GATC	9 cut(s)	654, 1073, 1277, 1378, 1538, 1928, 1990, 2110, 2272
BspACI	CCGC	5 cut(s)	393, 644, 2190, 2449, 2472
BspANI	GGCC	4 cut(s)	86, 647, 709, 1234
BspCNI	CTCAG	5 cut(s)	1261, 2039, 2171, 2494, 2494
BspLI	GGNNCC	5 cut(s)	187, 498, 839, 1185, 1490
BspMAI	CTGCAG	1 cut(s)	2418
BspMI	ACCTGC	1 cut(s)	2051
BspPI	GGATC	2 cut(s)	1285, 1936
BspQI	GCTCTTC	1 cut(s)	83
BspT104I	TTCGAA	1 cut(s)	23
BspT107I	GGYRCC	2 cut(s)	496, 837
BsrBI	CCGCTC	1 cut(s)	393
BsrDI	GCAATG	2 cut(s)	302, 2272
BssECI	CCNNGG	7 cut(s)	268, 482, 789, 870, 1492, 1658, 2295
BssMI	GATC	9 cut(s)	654, 1073, 1277, 1378, 1538, 1928, 1990, 2110, 2272
BssNI	GRCGYC	2 cut(s)	838, 1996
BssT1I	CCWWGG	5 cut(s)	482, 789, 870, 1492, 2295
Bst2UI	CCWGG	5 cut(s)	270, 603, 685, 1563, 1659
Bst4CI	ACNGT	3 cut(s)	1246, 1396, 2081
Bst6I	CTCTTC	5 cut(s)	83, 1938, 2134, 2170, 2355
BstACI	GRCGYC	2 cut(s)	838, 1996
BstBI	TTCGAA	1 cut(s)	23
BstC8I	GCNNGC	7 cut(s)	88, 309, 1793, 1819, 2188, 2429, 2585
BstDEI	CTNAG	7 cut(s)	552, 1269, 2026, 2158, 2261, 2481, 2502
BstF5I	GGATG	8 cut(s)	175, 257, 913, 1381, 1507, 2188, 2563, 2677
BstH2I	RGCGCY	3 cut(s)	841, 1107, 2067
BstHHI	GCGC	5 cut(s)	840, 1106, 1117, 1478, 2066
BstKTI	GATC	9 cut(s)	657, 1076, 1280, 1381, 1541, 1931, 1993, 2113, 2275
BstMAI	GTCTC	3 cut(s)	1530, 2333, 2484
BstMBI	GATC	9 cut(s)	654, 1073, 1277, 1378, 1538, 1928, 1990, 2110, 2272
BstMCI	CGRYCG	1 cut(s)	397
BstMWI	GCNNNNNNNGC	7 cut(s)	317, 448, 586, 947, 1112, 2070, 2168
BstNI	CCWGG	5 cut(s)	270, 603, 685, 1563, 1659
BstNSI	RCATGY	1 cut(s)	2315
BstSCI	CCNGG	5 cut(s)	268, 601, 683, 1561, 1657
BstSFI	CTRYAG	3 cut(s)	154, 702, 2414
BstV1I	GCAGC	3 cut(s)	638, 1222, 2599
BstX2I	RGATCY	3 cut(s)	1073, 1277, 2272
BstYI	RGATCY	3 cut(s)	1073, 1277, 2272
BsuI	GTATCC	2 cut(s)	943, 2376
BsuRI	GGCC	4 cut(s)	86, 647, 709, 1234
BtrI	CACGTC	1 cut(s)	1524
BtsCI	GGATG	8 cut(s)	175, 257, 913, 1381, 1507, 2188, 2563, 2677
BtsI	GCAGTG	1 cut(s)	2080
BtsIMutI	CAGTG	6 cut(s)	240, 1440, 1765, 1816, 2080, 2086
BveI	ACCTGC	1 cut(s)	2051
Cac8I	GCNNGC	7 cut(s)	88, 309, 1793, 1819, 2188, 2429, 2585
CaiI	CAGNNNCTG	1 cut(s)	779
CfoI	GCGC	5 cut(s)	840, 1106, 1117, 1478, 2066
Cfr13I	GGNCC	3 cut(s)	707, 776, 1232
CsiI	ACCWGGT	1 cut(s)	1561
Csp6I	GTAC	6 cut(s)	430, 860, 1065, 1776, 2199, 2654
CviAII	CATG	5 cut(s)	383, 1498, 1725, 2312, 2539
CviQI	GTAC	6 cut(s)	430, 860, 1065, 1776, 2199, 2654
DdeI	CTNAG	7 cut(s)	552, 1269, 2026, 2158, 2261, 2481, 2502
DinI	GGCGCC	1 cut(s)	839
DpnI	GATC	9 cut(s)	656, 1075, 1279, 1380, 1540, 1930, 1992, 2112, 2274
DpnII	GATC	9 cut(s)	654, 1073, 1277, 1378, 1538, 1928, 1990, 2110, 2272
DrdI	GACNNNNNNGTC	2 cut(s)	2001, 2476
DriI	GACNNNNNGTC	1 cut(s)	987
DseDI	GACNNNNNNGTC	2 cut(s)	2001, 2476
EaeI	YGGCCR	1 cut(s)	84
Eam1104I	CTCTTC	5 cut(s)	83, 1938, 2134, 2170, 2355
Eam1105I	GACNNNNNGTC	1 cut(s)	987
EarI	CTCTTC	5 cut(s)	83, 1938, 2134, 2170, 2355
Eco130I	CCWWGG	5 cut(s)	482, 789, 870, 1492, 2295
Eco24I	GRGCYC	3 cut(s)	153, 268, 1295
Eco32I	GATATC	1 cut(s)	2211
Eco47I	GGWCC	1 cut(s)	776
Eco57I	CTGAAG	3 cut(s)	549, 790, 2151
Eco88I	CYCGRG	3 cut(s)	329, 672, 1634
EcoO109I	RGGNCCY	2 cut(s)	707, 776
EcoRI	GAATTC	1 cut(s)	729
EcoRII	CCWGG	5 cut(s)	268, 601, 683, 1561, 1657
EcoRV	GATATC	1 cut(s)	2211
EcoT14I	CCWWGG	5 cut(s)	482, 789, 870, 1492, 2295
EcoT38I	GRGCYC	3 cut(s)	153, 268, 1295
EgeI	GGCGCC	1 cut(s)	839
EheI	GGCGCC	1 cut(s)	839
ErhI	CCWWGG	5 cut(s)	482, 789, 870, 1492, 2295
Esp3I	CGTCTC	1 cut(s)	1530
FaeI	CATG	5 cut(s)	386, 1501, 1728, 2315, 2542
FalI	AAGNNNNNCTT	2 cut(s)	62, 94
FaqI	GGGAC	1 cut(s)	2505
FatI	CATG	5 cut(s)	382, 1497, 1724, 2311, 2538
FauNDI	CATATG	1 cut(s)	2134
FbaI	TGATCA	1 cut(s)	1378
FblI	GTMKAC	1 cut(s)	980
Fnu4HI	GCNGC	5 cut(s)	627, 645, 1211, 2449, 2588
FokI	GGATG	8 cut(s)	182, 264, 920, 1388, 1514, 2195, 2570, 2684
FriOI	GRGCYC	3 cut(s)	153, 268, 1295
Fsp4HI	GCNGC	5 cut(s)	627, 645, 1211, 2449, 2588
GlaI	GCGC	5 cut(s)	839, 1105, 1116, 1477, 2065
GluI	GCNGC	5 cut(s)	627, 645, 1211, 2449, 2588
HaeII	RGCGCY	3 cut(s)	841, 1107, 2067
HaeIII	GGCC	4 cut(s)	86, 647, 709, 1234
HhaI	GCGC	5 cut(s)	840, 1106, 1117, 1478, 2066
Hin1I	GRCGYC	2 cut(s)	838, 1996
Hin1II	CATG	5 cut(s)	386, 1501, 1728, 2315, 2542
Hin6I	GCGC	5 cut(s)	838, 1104, 1115, 1476, 2064
HinP1I	GCGC	5 cut(s)	838, 1104, 1115, 1476, 2064
HincII	GTYRAC	3 cut(s)	981, 1568, 1912
HindII	GTYRAC	3 cut(s)	981, 1568, 1912
HindIII	AAGCTT	3 cut(s)	531, 578, 1709
HpaI	GTTAAC	1 cut(s)	1912
HphI	GGTGA	6 cut(s)	224, 563, 1551, 1691, 2311, 2312
Hpy166II	GTNNAC	6 cut(s)	981, 1067, 1568, 1912, 2123, 2569
Hpy8I	GTNNAC	6 cut(s)	981, 1067, 1568, 1912, 2123, 2569
Hpy99I	CGWCG	2 cut(s)	1998, 2001
HpyAV	CCTTC	7 cut(s)	720, 1009, 1706, 1928, 2365, 2482, 2641
HpyCH4III	ACNGT	3 cut(s)	1246, 1396, 2081
HpyCH4IV	ACGT	6 cut(s)	19, 1523, 1668, 1784, 1996, 2256
HpyF10VI	GCNNNNNNNGC	7 cut(s)	317, 448, 586, 947, 1112, 2070, 2168
HpyF3I	CTNAG	7 cut(s)	552, 1269, 2026, 2158, 2261, 2481, 2502
HpySE526I	ACGT	6 cut(s)	19, 1523, 1668, 1784, 1996, 2256
Hsp92I	GRCGYC	2 cut(s)	838, 1996
Hsp92II	CATG	5 cut(s)	386, 1501, 1728, 2315, 2542
HspAI	GCGC	5 cut(s)	838, 1104, 1115, 1476, 2064
KasI	GGCGCC	1 cut(s)	837
Ksp22I	TGATCA	1 cut(s)	1378
KspAI	GTTAAC	1 cut(s)	1912
Kzo9I	GATC	9 cut(s)	654, 1073, 1277, 1378, 1538, 1928, 1990, 2110, 2272
LguI	GCTCTTC	1 cut(s)	83
LmnI	GCTCC	2 cut(s)	390, 687
Lsp1109I	GCAGC	3 cut(s)	638, 1222, 2599
LweI	GCATC	7 cut(s)	383, 686, 779, 1672, 2173, 2293, 2414
MabI	ACCWGGT	1 cut(s)	1561
MaeII	ACGT	6 cut(s)	19, 1523, 1668, 1784, 1996, 2256
MaeIII	GTNAC	9 cut(s)	235, 565, 800, 830, 899, 1557, 1610, 1765, 2075
MalI	GATC	9 cut(s)	656, 1075, 1279, 1380, 1540, 1930, 1992, 2112, 2274
MbiI	CCGCTC	1 cut(s)	393
MboI	GATC	9 cut(s)	654, 1073, 1277, 1378, 1538, 1928, 1990, 2110, 2272
MfeI	CAATTG	1 cut(s)	510
MflI	RGATCY	3 cut(s)	1073, 1277, 2272
MhlI	GDGCHC	4 cut(s)	153, 268, 1295, 2585
Mly113I	GGCGCC	1 cut(s)	838
MlyI	GAGTC	4 cut(s)	607, 1745, 2044, 2150
MmeI	TCCRAC	1 cut(s)	2510
MroXI	GAANNNNTTC	2 cut(s)	77, 190
MseI	TTAA	6 cut(s)	39, 107, 287, 369, 1856, 1911
MslI	CAYNNNNRTG	3 cut(s)	437, 1374, 2226
MspA1I	CMGCKG	1 cut(s)	2190
MspR9I	CCNGG	5 cut(s)	270, 603, 685, 1563, 1659
MunI	CAATTG	1 cut(s)	510
Mva1269I	GAATGC	2 cut(s)	1212, 2221
MvaI	CCWGG	5 cut(s)	270, 603, 685, 1563, 1659
MwoI	GCNNNNNNNGC	7 cut(s)	317, 448, 586, 947, 1112, 2070, 2168
NarI	GGCGCC	1 cut(s)	838
NdeI	CATATG	1 cut(s)	2134
NdeII	GATC	9 cut(s)	654, 1073, 1277, 1378, 1538, 1928, 1990, 2110, 2272
NlaIII	CATG	5 cut(s)	386, 1501, 1728, 2315, 2542
NlaIV	GGNNCC	5 cut(s)	187, 498, 839, 1185, 1490
NmeAIII	GCCGAG	2 cut(s)	62, 525
NmuCI	GTSAC	7 cut(s)	235, 800, 830, 1557, 1610, 1765, 2075
NspI	RCATGY	1 cut(s)	2315
NspV	TTCGAA	1 cut(s)	23
PaeR7I	CTCGAG	1 cut(s)	672
PciI	ACATGT	1 cut(s)	2311
PciSI	GCTCTTC	1 cut(s)	83
PctI	GAATGC	2 cut(s)	1212, 2221
PdmI	GAANNNNTTC	2 cut(s)	77, 190
PfeI	GAWTC	9 cut(s)	95, 299, 356, 469, 718, 884, 1406, 1601, 2347
PflMI	CCANNNNNTGG	2 cut(s)	1220, 1498
PkrI	GCNGC	5 cut(s)	628, 646, 1212, 2450, 2589
PleI	GAGTC	4 cut(s)	606, 1744, 2043, 2150
PluTI	GGCGCC	1 cut(s)	841
PpsI	GAGTC	4 cut(s)	606, 1744, 2043, 2150
PpuMI	RGGWCCY	1 cut(s)	776
PscI	ACATGT	1 cut(s)	2311
PshBI	ATTAAT	1 cut(s)	287
Psp1406I	AACGTT	1 cut(s)	19
Psp5II	RGGWCCY	1 cut(s)	776
Psp6I	CCWGG	5 cut(s)	268, 601, 683, 1561, 1657
PspGI	CCWGG	5 cut(s)	268, 601, 683, 1561, 1657
PspN4I	GGNNCC	5 cut(s)	187, 498, 839, 1185, 1490
PspPI	GGNCC	3 cut(s)	707, 776, 1232
PspPPI	RGGWCCY	1 cut(s)	776
PspXI	VCTCGAGB	1 cut(s)	672
PsrI	GAACNNNNNNTAC	2 cut(s)	1350, 1382
PstI	CTGCAG	1 cut(s)	2418
PstNI	CAGNNNCTG	1 cut(s)	779
PsuI	RGATCY	3 cut(s)	1073, 1277, 2272
RsaI	GTAC	6 cut(s)	431, 861, 1066, 1777, 2200, 2655
RsaNI	GTAC	6 cut(s)	430, 860, 1065, 1776, 2199, 2654
RseI	CAYNNNNRTG	3 cut(s)	437, 1374, 2226
SalI	GTCGAC	1 cut(s)	979
SapI	GCTCTTC	1 cut(s)	83
SaqAI	TTAA	6 cut(s)	39, 107, 287, 369, 1856, 1911
SatI	GCNGC	5 cut(s)	627, 645, 1211, 2449, 2588
Sau3AI	GATC	9 cut(s)	654, 1073, 1277, 1378, 1538, 1928, 1990, 2110, 2272
Sau96I	GGNCC	3 cut(s)	707, 776, 1232
SchI	GAGTC	4 cut(s)	607, 1745, 2044, 2150
ScrFI	CCNGG	5 cut(s)	270, 603, 685, 1563, 1659
SduI	GDGCHC	4 cut(s)	153, 268, 1295, 2585
SexAI	ACCWGGT	1 cut(s)	1561
SfaNI	GCATC	7 cut(s)	383, 686, 779, 1672, 2173, 2293, 2414
SfcI	CTRYAG	3 cut(s)	154, 702, 2414
SfoI	GGCGCC	1 cut(s)	839
Sfr274I	CTCGAG	1 cut(s)	672
SfuI	TTCGAA	1 cut(s)	23
SinI	GGWCC	1 cut(s)	776
SlaI	CTCGAG	1 cut(s)	672
SmiMI	CAYNNNNRTG	3 cut(s)	437, 1374, 2226
SmlI	CTYRAG	4 cut(s)	672, 724, 1118, 1294
SmoI	CTYRAG	4 cut(s)	672, 724, 1118, 1294
SpeI	ACTAGT	1 cut(s)	239
SsiI	CCGC	5 cut(s)	393, 644, 2190, 2449, 2472
SspDI	GGCGCC	1 cut(s)	837
SspI	AATATT	2 cut(s)	961, 2436
StyD4I	CCNGG	5 cut(s)	268, 601, 683, 1561, 1657
StyI	CCWWGG	5 cut(s)	482, 789, 870, 1492, 2295
TaaI	ACNGT	3 cut(s)	1246, 1396, 2081
TaiI	ACGT	6 cut(s)	22, 1526, 1671, 1787, 1999, 2259
TaqI	TCGA	9 cut(s)	23, 673, 716, 980, 1993, 2038, 2154, 2376, 2604
TatI	WGTACW	2 cut(s)	429, 1064
TauI	GCSGC	2 cut(s)	647, 2451
TfiI	GAWTC	9 cut(s)	95, 299, 356, 469, 718, 884, 1406, 1601, 2347
Tru1I	TTAA	6 cut(s)	39, 107, 287, 369, 1856, 1911
Tru9I	TTAA	6 cut(s)	39, 107, 287, 369, 1856, 1911
TscAI	CASTG	6 cut(s)	240, 1440, 1765, 1816, 2080, 2086
TseFI	GTSAC	7 cut(s)	235, 800, 830, 1557, 1610, 1765, 2075
TseI	GCWGC	3 cut(s)	626, 1210, 2587
Tsp45I	GTSAC	7 cut(s)	235, 800, 830, 1557, 1610, 1765, 2075
TspGWI	ACGGA	2 cut(s)	1084, 1314
TspRI	CASTG	6 cut(s)	240, 1440, 1765, 1816, 2080, 2086
Van91I	CCANNNNNTGG	2 cut(s)	1220, 1498
VpaK11BI	GGWCC	1 cut(s)	776
VspI	ATTAAT	1 cut(s)	287
XapI	RAATTY	3 cut(s)	729, 1639, 1985
XbaI	TCTAGA	3 cut(s)	2174, 2275, 2635
XceI	RCATGY	1 cut(s)	2315
XcmI	CCANNNNNNNNNTGG	1 cut(s)	877
XhoI	CTCGAG	1 cut(s)	672
XmaJI	CCTAGG	1 cut(s)	482
XmiI	GTMKAC	1 cut(s)	980
XmnI	GAANNNNTTC	2 cut(s)	77, 190
ZraI	GACGTC	1 cut(s)	1997

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.