Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004706

Physical Location & Seq

Genomic Coordinates Reverse (-)

4690415 .. 4693133

Gene Structure 2719 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G14150.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1092 bp

ATGGATCAAATCGTTAATGTGGATGAGTTTCAAGAGCTGGCTAAACAAGCCCTCCCTAAGATGTACTATGATTTCTACAATGGAGGAGCAGAGGATCAACACACTCTCAATGAAAATGTCCAAGCTTTCCGTAGAATCATGTTTAGGCCGAGGGTTCTCGTTGATGTGAGCAAAATAGATATGTCTACCAAAATATTGGGTTACCCTATCTCTGCTCCAATCATGATTGCTCCAACAGGAAATCATAAGTTGGCTCATCCTGAAGGAGAAACCGCTACTGCGAAAGCTGCAGCTGCGTGTAATACTATCATGATAGTATCATACATGTCTTCATGCACTTTTGAGGAGATTGCTTCCAGTTGTAACGCTGTTCGGTTTCTTCAAATATATGTGTACAAGAGACGGGACATAACTGCTCAGGTGGTGAAAAGAGCTGAGAAAGCTGGGTTTAAGGCCATAGTTCTGACTGTTGATGTTCCTAGACTTGGTAGAAGGGAAGCTGATATAAAGAACAAAATGATATCCCCGCAGCTGAAGAATTTCGAAGGTTTATTTTCAACCGAAGTCCGACCTAGTAAAGGTTCAGGGGTACAAGCCTTCGCCTCTCGTGCATTTGATGCTTCATTTAGCTGGAAGGACATTGAATGGTTAAGATCTATTACAGAGTTACCTATTCTGGTCAAAGGGATACTCACCCGAGAAGACGCTCTTAAGGCTGTTGAAGCTGGTGTAGATGGAATAATTGTATCTAACCATGGGGGTCGCCAGCTCGACTATTCCCCTGCTACAATAACTGTTTTAGAAGAGGTTGTTCAAGTTGTTAGAGGTAGGATTCCGGTTTTGCTTGATGGAGGAGTAAGACGAGGGACAGATGTTTTCAAAGCCCTGGCACTTGGAGCACAAGCTGTTCTTATAGGGAGGCCTATAATCTATGGGCTTGCAGCTAAGGGTGAAGATGGAGTGAAAAAAGTGATTGATATGTTAAAGAATGAGTTTGAGATTACTATGGCTCTTTCTGGTTGTCCAACCATTGATGACATAACCAGAAACCATGTTAGGACAGAGAATGAGAGACTTCACTCTATGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002218 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003824 GO:0003973 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008891 GO:0009058 GO:0009605 GO:0009607 GO:0009617 GO:0009853 GO:0009987 GO:0010109 GO:0010204 GO:0016032 GO:0016491 GO:0016614 GO:0016899 GO:0016999 GO:0017000 GO:0017144 GO:0019048 GO:0019222 GO:0023052 GO:0031323 GO:0031347 GO:0031349 GO:0035821 GO:0042579 GO:0042742 GO:0042743 GO:0043094 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044003 GO:0044237 GO:0044249 GO:0044403 GO:0044419 GO:0044424 GO:0044444 GO:0044464 GO:0045088 GO:0045089 GO:0048518 GO:0048583 GO:0048584 GO:0050665 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051186 GO:0051188 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0055114 GO:0065007 GO:0072593 GO:0080134 GO:0098542 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko00630 ko01100 ko01110 ko01120 ko01130 ko01200 ko04146 map00630 map01100 map01110 map01120 map01130 map01200 map04146

Pfam Domains

Protein Families

FMN_dh

Protein Analysis

363

Amino Acids

40.13

Weight (kDa)

8.53

Isoelectric Point (pI)

45.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FMN_dh	PF01070	1 - 245	6e-98	FMN-dependent dehydrogenase
IMPDH	PF00478	105 - 199	2.9e-07	IMP dehydrogenase / GMP reductase domain
NMO	PF03060	119 - 232	7.7e-09	Nitronate monooxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004706)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14130 AT3G14130 AT3G14130 AT3G14150 AT3G14150
fragaria_vesca	FvH4_6g35190 FvH4_6g35192
malus_domestica	MD09G1177800.v1.1 MD17G1148900.v1.1
prunus_persica	Prupe.3G037200_v2.0.a1 Prupe.3G037200_v2.0.a1 Prupe.3G037200_v2.0.a1
pyrus_communis	pycom09g09620 pycom17g14260
rosa_chinensis	RchiOBHm_Chr2g0146451 RchiOBHm_Chr2g0146471 RchiOBHm_Chr2g0146501
rosa_laevigata	RLG00000020202 RLG00000020203
rosa_multiflora	Rmu_co8466583.1_g000001 Rmu_sc0001986.1_g000011 Rmu_sc0024495.1_g000001
rosa_roxburghii	Rroxscaffold_2G00100070 Rroxscaffold_2G00100080
rosa_rugosa	Rorug02G0394600
rosa_samantha	Rh2DG472800 Rh2DG472900
rosa_wichuraiana	Rw2G036840 Rw2G036850 Rw2G036860 Rw2G036870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	185
AciI	CCGC	2 cut(s)	273, 527
AclWI	GGATC	2 cut(s)	12, 102
AcsI	RAATTY	1 cut(s)	538
AcuI	CTGAAG	2 cut(s)	282, 554
AfaI	GTAC	3 cut(s)	65, 395, 591
AfiI	CCNNNNNNNGG	2 cut(s)	485, 578
AflII	CTTAAG	1 cut(s)	710
AflIII	ACRYGT	1 cut(s)	324
AgsI	TTSAA	7 cut(s)	32, 383, 558, 644, 722, 815, 880
AjnI	CCWGG	1 cut(s)	885
Alw21I	GWGCWC	1 cut(s)	901
Alw26I	GTCTC	2 cut(s)	394, 1066
AlwI	GGATC	2 cut(s)	12, 102
Ama87I	CYCGRG	1 cut(s)	696
AoxI	GGCC	3 cut(s)	146, 453, 920
ApeKI	GCWGC	5 cut(s)	287, 290, 293, 529, 941
ApoI	RAATTY	1 cut(s)	538
Asp700I	GAANNNNTTC	1 cut(s)	539
AsuHPI	GGTGA	3 cut(s)	436, 685, 962
AsuII	TTCGAA	1 cut(s)	543
AvaI	CYCGRG	1 cut(s)	696
BauI	CACGAG	1 cut(s)	606
BbsI	GAAGAC	2 cut(s)	321, 708
Bbv12I	GWGCWC	1 cut(s)	901
BbvI	GCAGC	5 cut(s)	274, 280, 302, 541, 953
BccI	CCATC	3 cut(s)	728, 842, 950
BciT130I	CCWGG	1 cut(s)	887
BciVI	GTATCC	1 cut(s)	681
BcoDI	GTCTC	2 cut(s)	394, 1066
BfaI	CTAG	2 cut(s)	480, 573
BfmI	CTRYAG	1 cut(s)	288
BfrI	CTTAAG	1 cut(s)	710
BfuI	GTATCC	1 cut(s)	681
BglII	AGATCT	1 cut(s)	653
BisI	GCNGC	5 cut(s)	288, 291, 294, 530, 942
BlsI	GCNGC	5 cut(s)	289, 292, 295, 531, 943
Bme1390I	CCNGG	1 cut(s)	887
BmeT110I	CYCGRG	1 cut(s)	696
BmrFI	CCNGG	1 cut(s)	887
BmsI	GCATC	1 cut(s)	607
BpiI	GAAGAC	2 cut(s)	321, 708
Bpu10I	CCTNAGC	2 cut(s)	417, 945
Bpu14I	TTCGAA	1 cut(s)	543
BsaJI	CCNNGG	3 cut(s)	149, 754, 885
BsaWI	WCCGGW	1 cut(s)	835
BsaXI	ACNNNNNCTCC	2 cut(s)	36, 66
Bsc4I	CCNNNNNNNGG	2 cut(s)	485, 578
Bse1I	ACTGG	1 cut(s)	357
BseBI	CCWGG	1 cut(s)	887
BseDI	CCNNGG	3 cut(s)	149, 754, 885
BseGI	GGATG	2 cut(s)	28, 256
BseLI	CCNNNNNNNGG	2 cut(s)	485, 578
BseMII	CTCAG	2 cut(s)	426, 431
BseNI	ACTGG	1 cut(s)	357
BseRI	GAGGAG	3 cut(s)	99, 359, 867
BseXI	GCAGC	5 cut(s)	274, 280, 302, 541, 953
BseYI	CCCAGC	1 cut(s)	443
BshFI	GGCC	3 cut(s)	148, 455, 922
BsiHKAI	GWGCWC	1 cut(s)	901
BsiHKCI	CYCGRG	1 cut(s)	696
BsiSI	CCGG	1 cut(s)	836
BslFI	GGGAC	2 cut(s)	419, 880
BslI	CCNNNNNNNGG	2 cut(s)	485, 578
BsmAI	GTCTC	2 cut(s)	394, 1066
BsmBI	CGTCTC	1 cut(s)	394
BsmFI	GGGAC	2 cut(s)	419, 880
BsnI	GGCC	3 cut(s)	148, 455, 922
BsoBI	CYCGRG	1 cut(s)	696
Bsp119I	TTCGAA	1 cut(s)	543
Bsp1286I	GDGCHC	1 cut(s)	901
Bsp1407I	TGTACA	1 cut(s)	393
Bsp143I	GATC	3 cut(s)	4, 94, 653
Bsp19I	CCATGG	1 cut(s)	754
BspACI	CCGC	2 cut(s)	273, 527
BspANI	GGCC	3 cut(s)	148, 455, 922
BspCNI	CTCAG	2 cut(s)	427, 430
BspHI	TCATGA	2 cut(s)	222, 309
BspMAI	CTGCAG	1 cut(s)	292
BspPI	GGATC	2 cut(s)	12, 102
BspT104I	TTCGAA	1 cut(s)	543
BspTI	CTTAAG	1 cut(s)	710
BsrGI	TGTACA	1 cut(s)	393
BsrI	ACTGG	1 cut(s)	357
BssECI	CCNNGG	3 cut(s)	149, 754, 885
BssMI	GATC	3 cut(s)	4, 94, 653
BssSI	CACGAG	1 cut(s)	606
BssT1I	CCWWGG	1 cut(s)	754
Bst2BI	CACGAG	1 cut(s)	606
Bst2UI	CCWGG	1 cut(s)	887
Bst4CI	ACNGT	2 cut(s)	469, 796
Bst6I	CTCTTC	1 cut(s)	798
BstAFI	CTTAAG	1 cut(s)	710
BstAPI	GCANNNNNTGC	1 cut(s)	617
BstAUI	TGTACA	1 cut(s)	393
BstBI	TTCGAA	1 cut(s)	543
BstC8I	GCNNGC	3 cut(s)	39, 767, 939
BstDEI	CTNAG	4 cut(s)	57, 417, 435, 945
BstDSI	CCRYGG	1 cut(s)	754
BstEII	GGTNACC	1 cut(s)	200
BstENI	CCTNNNNNAGG	1 cut(s)	576
BstF5I	GGATG	2 cut(s)	28, 256
BstKTI	GATC	3 cut(s)	7, 97, 656
BstMAI	GTCTC	2 cut(s)	394, 1066
BstMBI	GATC	3 cut(s)	4, 94, 653
BstMWI	GCNNNNNNNGC	9 cut(s)	47, 287, 293, 440, 608, 617, 713, 722, 896
BstNI	CCWGG	1 cut(s)	887
BstNSI	RCATGY	1 cut(s)	328
BstPI	GGTNACC	1 cut(s)	200
BstSCI	CCNGG	1 cut(s)	885
BstSFI	CTRYAG	1 cut(s)	288
BstV1I	GCAGC	5 cut(s)	274, 280, 302, 541, 953
BstV2I	GAAGAC	2 cut(s)	321, 708
BstX2I	RGATCY	1 cut(s)	653
BstXI	CCANNNNNNTGG	1 cut(s)	196
BstYI	RGATCY	1 cut(s)	653
BsuI	GTATCC	1 cut(s)	681
BsuRI	GGCC	3 cut(s)	148, 455, 922
BtgI	CCRYGG	1 cut(s)	754
BtsCI	GGATG	2 cut(s)	28, 256
Cac8I	GCNNGC	3 cut(s)	39, 767, 939
CciI	TCATGA	2 cut(s)	222, 309
CseI	GACGC	1 cut(s)	713
Csp6I	GTAC	3 cut(s)	64, 394, 590
CviAII	CATG	7 cut(s)	139, 223, 310, 325, 333, 755, 1052
CviQI	GTAC	3 cut(s)	64, 394, 590
DdeI	CTNAG	4 cut(s)	57, 417, 435, 945
DpnI	GATC	3 cut(s)	6, 96, 655
DpnII	GATC	3 cut(s)	4, 94, 653
Eam1104I	CTCTTC	1 cut(s)	798
EarI	CTCTTC	1 cut(s)	798
Eco130I	CCWWGG	1 cut(s)	754
Eco147I	AGGCCT	1 cut(s)	922
Eco32I	GATATC	1 cut(s)	522
Eco57I	CTGAAG	2 cut(s)	282, 554
Eco88I	CYCGRG	1 cut(s)	696
Eco91I	GGTNACC	1 cut(s)	200
EcoNI	CCTNNNNNAGG	1 cut(s)	576
EcoO65I	GGTNACC	1 cut(s)	200
EcoRII	CCWGG	1 cut(s)	885
EcoRV	GATATC	1 cut(s)	522
EcoT14I	CCWWGG	1 cut(s)	754
ErhI	CCWWGG	1 cut(s)	754
Esp3I	CGTCTC	1 cut(s)	394
FaeI	CATG	7 cut(s)	142, 226, 313, 328, 336, 758, 1055
FalI	AAGNNNNNCTT	4 cut(s)	693, 725, 894, 926
FaqI	GGGAC	2 cut(s)	419, 880
FatI	CATG	7 cut(s)	138, 222, 309, 324, 332, 754, 1051
FauI	CCCGC	1 cut(s)	534
FblI	GTMKAC	1 cut(s)	185
Fnu4HI	GCNGC	5 cut(s)	288, 291, 294, 530, 942
FokI	GGATG	2 cut(s)	35, 243
Fsp4HI	GCNGC	5 cut(s)	288, 291, 294, 530, 942
FspBI	CTAG	2 cut(s)	480, 573
GluI	GCNGC	5 cut(s)	288, 291, 294, 530, 942
GsaI	CCCAGC	1 cut(s)	447
HaeIII	GGCC	3 cut(s)	148, 455, 922
HapII	CCGG	1 cut(s)	836
HgaI	GACGC	1 cut(s)	713
Hin1II	CATG	7 cut(s)	142, 226, 313, 328, 336, 758, 1055
HindIII	AAGCTT	1 cut(s)	123
HinfI	GANTC	2 cut(s)	135, 832
HpaII	CCGG	1 cut(s)	836
HphI	GGTGA	3 cut(s)	436, 685, 962
Hpy166II	GTNNAC	2 cut(s)	186, 394
Hpy188I	TCNGA	3 cut(s)	465, 569, 1091
Hpy188III	TCNNGA	4 cut(s)	32, 223, 260, 310
Hpy8I	GTNNAC	2 cut(s)	186, 394
HpyAV	CCTTC	5 cut(s)	257, 486, 539, 607, 628
HpyCH4III	ACNGT	2 cut(s)	469, 796
HpyCH4V	TGCA	4 cut(s)	290, 336, 611, 941
HpyF10VI	GCNNNNNNNGC	9 cut(s)	47, 287, 293, 440, 608, 617, 713, 722, 896
HpyF3I	CTNAG	4 cut(s)	57, 417, 435, 945
Hsp92II	CATG	7 cut(s)	142, 226, 313, 328, 336, 758, 1055
Kzo9I	GATC	3 cut(s)	4, 94, 653
LmnI	GCTCC	4 cut(s)	86, 220, 235, 896
Lsp1109I	GCAGC	5 cut(s)	274, 280, 302, 541, 953
LweI	GCATC	1 cut(s)	607
MaeI	CTAG	2 cut(s)	480, 573
MaeIII	GTNAC	3 cut(s)	200, 362, 666
MalI	GATC	3 cut(s)	6, 96, 655
MboI	GATC	3 cut(s)	4, 94, 653
MboII	GAAGA	6 cut(s)	321, 371, 547, 713, 815, 965
MflI	RGATCY	1 cut(s)	653
MhlI	GDGCHC	1 cut(s)	901
MluCI	AATT	2 cut(s)	538, 741
MmeI	TCCRAC	3 cut(s)	257, 592, 1049
MroXI	GAANNNNTTC	1 cut(s)	539
MseI	TTAA	5 cut(s)	15, 450, 650, 711, 983
MspA1I	CMGCKG	2 cut(s)	293, 532
MspCI	CTTAAG	1 cut(s)	710
MspI	CCGG	1 cut(s)	836
MspR9I	CCNGG	1 cut(s)	887
MvaI	CCWGG	1 cut(s)	887
MwoI	GCNNNNNNNGC	9 cut(s)	47, 287, 293, 440, 608, 617, 713, 722, 896
NcoI	CCATGG	1 cut(s)	754
NdeII	GATC	3 cut(s)	4, 94, 653
NlaIII	CATG	7 cut(s)	142, 226, 313, 328, 336, 758, 1055
NmeAIII	GCCGAG	1 cut(s)	174
NspI	RCATGY	1 cut(s)	328
NspV	TTCGAA	1 cut(s)	543
PagI	TCATGA	2 cut(s)	222, 309
PceI	AGGCCT	1 cut(s)	922
PciI	ACATGT	1 cut(s)	324
PdmI	GAANNNNTTC	1 cut(s)	539
PfeI	GAWTC	2 cut(s)	135, 832
PkrI	GCNGC	5 cut(s)	289, 292, 295, 531, 943
PscI	ACATGT	1 cut(s)	324
Psp6I	CCWGG	1 cut(s)	885
PspEI	GGTNACC	1 cut(s)	200
PspFI	CCCAGC	1 cut(s)	443
PspGI	CCWGG	1 cut(s)	885
PstI	CTGCAG	1 cut(s)	292
PsuI	RGATCY	1 cut(s)	653
PvuII	CAGCTG	2 cut(s)	293, 532
RsaI	GTAC	3 cut(s)	65, 395, 591
RsaNI	GTAC	3 cut(s)	64, 394, 590
SaqAI	TTAA	5 cut(s)	15, 450, 650, 711, 983
SatI	GCNGC	5 cut(s)	288, 291, 294, 530, 942
Sau3AI	GATC	3 cut(s)	4, 94, 653
ScrFI	CCNGG	1 cut(s)	887
SduI	GDGCHC	1 cut(s)	901
SfaNI	GCATC	1 cut(s)	607
SfcI	CTRYAG	1 cut(s)	288
SfuI	TTCGAA	1 cut(s)	543
SmlI	CTYRAG	1 cut(s)	710
SmoI	CTYRAG	1 cut(s)	710
Sse9I	AATT	2 cut(s)	538, 741
SseBI	AGGCCT	1 cut(s)	922
SsiI	CCGC	2 cut(s)	273, 527
SspI	AATATT	1 cut(s)	195
SspMI	CTAG	2 cut(s)	480, 573
StuI	AGGCCT	1 cut(s)	922
StyD4I	CCNGG	1 cut(s)	885
StyI	CCWWGG	1 cut(s)	754
TaaI	ACNGT	2 cut(s)	469, 796
TaqI	TCGA	2 cut(s)	543, 771
TasI	AATT	2 cut(s)	538, 741
TatI	WGTACW	2 cut(s)	63, 393
TfiI	GAWTC	2 cut(s)	135, 832
Tru1I	TTAA	5 cut(s)	15, 450, 650, 711, 983
Tru9I	TTAA	5 cut(s)	15, 450, 650, 711, 983
TseI	GCWGC	5 cut(s)	287, 290, 293, 529, 941
TspDTI	ATGAA	3 cut(s)	126, 321, 612
TspGWI	ACGGA	1 cut(s)	119
Vha464I	CTTAAG	1 cut(s)	710
XagI	CCTNNNNNAGG	1 cut(s)	576
XapI	RAATTY	1 cut(s)	538
XceI	RCATGY	1 cut(s)	328
XmiI	GTMKAC	1 cut(s)	185
XmnI	GAANNNNTTC	1 cut(s)	539
XspI	CTAG	2 cut(s)	480, 573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.