Rmu_sc0001986.1_g000011

(S)-2-hydroxy-acid oxidase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001986.1
Physical Location & Seq
Reverse (-)
55340 .. 57647
2308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001986.1_g000011.1.cds

Sequence Viewer

Length: 1098 bp
atggcatctgaacctgtaaatgtcaatgaattccaagaattggctaagcaagtccttccaaaaatgtactatgatttctatactgggggagctgaggaccagttcacgctaaaagagaatgttgaagcatttcgcagaatcatattaaggcctagagttctggtagatgttagcaggatcgatatgtcaaccactgtattgggttacaaaatctcagcgcctataatgattgctcctacttctaggcatcagttagcacaccctgaaggagaggtggctactgctagagctgcagctgcatccaacactataatgattttgtcctactcttctacctgcactgtggaggaggttgcttcgagctgcaatgctgttcggttctttcaattatatgttttcaagagacgggatatatctgctcagatagttcaaagagctgaaaaaaatgggtacaaggctattgtactaactgtcgatgctcccagacttggtagaagagaggcagacataaagaacaaaatgatttcaactcaattgaaaaacttcgaaggcctaatatcaactgaactagactctgatgaaggatccaacttggaagcttatgtcagagcggtctatgatgattctttgtgctgggaggacgtaataggatggttaaaatctattacaaacttgccaattctagtcaagggtatcctcactcatgaagatgcaagaaaggctgtggaagttggtgttgccgggattgttgtctctaatcacggagcacgacaactagactacactccggccactatttctgtcctggaagaggtggttcaagctgttggagggaaagttcctgttctttttgatggaggaatacggcgaggaactgatgtcttcaaggcattggccctcggtgcacaagccgtccttgttggaaagccggttatctatggccttgcagcaaatggagaaaatggggtgagaaaggtcatgaagatgttgaaggatgagttagagctcactatggctctctctggctgtcctagtgttaaggatattaccaggagccacgtgaaaacagaatgtgaaagactccgctcccagctttaa

Protein Analysis

365

Amino Acids

40.11

Weight (kDa)

6.97

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 344
AccB7I CCANNNNNTGG 1 cut(s) 40
AccBSI CCGCTC 2 cut(s) 611, 1086
AciI CCGC 2 cut(s) 611, 1084
AclWI GGATC 3 cut(s) 185, 579, 592
AcoI YGGCCR 1 cut(s) 789
AcsI RAATTY 1 cut(s) 29
AcuI CTGAAG 1 cut(s) 285
AcvI CACGTG 1 cut(s) 1060
AfaI GTAC 3 cut(s) 68, 452, 465
AfiI CCNNNNNNNGG 3 cut(s) 40, 488, 811
AgsI TTSAA 9 cut(s) 125, 386, 400, 431, 528, 538, 821, 886, 991
AjnI CCWGG 2 cut(s) 804, 1049
AloI GAACNNNNNNTCC 2 cut(s) 822, 854
AluBI AGCT 9 cut(s) 92, 290, 296, 363, 437, 599, 824, 1006, 1093
AluI AGCT 9 cut(s) 92, 290, 296, 363, 437, 599, 824, 1006, 1093
Alw21I GWGCWC 3 cut(s) 769, 907, 1008
Alw26I GTCTC 2 cut(s) 397, 757
Alw44I GTGCAC 1 cut(s) 903
AlwI GGATC 3 cut(s) 185, 579, 592
AoxI GGCC 5 cut(s) 149, 550, 789, 894, 940
ApaLI GTGCAC 1 cut(s) 903
ApeKI GCWGC 5 cut(s) 290, 293, 296, 363, 947
ApoI RAATTY 1 cut(s) 29
Asp700I GAANNNNTTC 2 cut(s) 129, 542
AspLEI GCGC 1 cut(s) 220
AspS9I GGNCC 2 cut(s) 97, 895
AsuC2I CCSGG 1 cut(s) 742
AsuHPI GGTGA 1 cut(s) 979
AsuII TTCGAA 1 cut(s) 546
AvaII GGWCC 1 cut(s) 97
BaeGI GKGCMC 1 cut(s) 907
BamHI GGATCC 1 cut(s) 584
BanII GRGCYC 1 cut(s) 1008
BbrPI CACGTG 1 cut(s) 1060
BbsI GAAGAC 1 cut(s) 874
Bbv12I GWGCWC 3 cut(s) 769, 907, 1008
BbvCI CCTCAGC 1 cut(s) 93
BbvI GCAGC 5 cut(s) 277, 283, 305, 350, 959
BccI CCATC 2 cut(s) 645, 848
BceAI ACGGC 2 cut(s) 881, 896
BciT130I CCWGG 2 cut(s) 806, 1051
BciVI GTATCC 1 cut(s) 704
BcnI CCSGG 1 cut(s) 742
BcoDI GTCTC 2 cut(s) 397, 757
BfaI CTAG 7 cut(s) 153, 243, 285, 569, 683, 776, 1032
BfmI CTRYAG 1 cut(s) 291
BfoI RGCGCY 1 cut(s) 221
BfuAI ACCTGC 1 cut(s) 344
BfuI GTATCC 1 cut(s) 704
BisI GCNGC 5 cut(s) 291, 294, 297, 364, 948
BlpI GCTNAGC 1 cut(s) 45
BlsI GCNGC 5 cut(s) 292, 295, 298, 365, 949
Bme1390I CCNGG 3 cut(s) 742, 806, 1051
Bme18I GGWCC 1 cut(s) 97
BmgT120I GGNCC 2 cut(s) 97, 895
BmiI GGNNCC 2 cut(s) 586, 1055
BmrFI CCNGG 3 cut(s) 742, 806, 1051
BmrI ACTGGG 1 cut(s) 93
BmsI GCATC 5 cut(s) 14, 256, 308, 466, 700
BmuI ACTGGG 1 cut(s) 93
BpiI GAAGAC 1 cut(s) 874
Bpu10I CCTNAGC 1 cut(s) 93
Bpu1102I GCTNAGC 1 cut(s) 45
Bpu14I TTCGAA 1 cut(s) 546
BpuMI CCSGG 1 cut(s) 742
Bsa29I ATCGAT 1 cut(s) 180
BsaAI YACGTR 1 cut(s) 1060
BsaJI CCNNGG 1 cut(s) 898
BsaXI ACNNNNNCTCC 2 cut(s) 822, 852
Bsc4I CCNNNNNNNGG 3 cut(s) 40, 488, 811
Bse118I RCCGGY 1 cut(s) 928
Bse1I ACTGG 2 cut(s) 88, 100
Bse3DI GCAATG 1 cut(s) 373
BseBI CCWGG 2 cut(s) 806, 1051
BseCI ATCGAT 1 cut(s) 180
BseDI CCNNGG 1 cut(s) 898
BseGI GGATG 3 cut(s) 299, 656, 1000
BseLI CCNNNNNNNGG 3 cut(s) 40, 488, 811
BseMI GCAATG 1 cut(s) 373
BseMII CTCAG 3 cut(s) 84, 228, 434
BseNI ACTGG 2 cut(s) 88, 100
BseRI GAGGAG 1 cut(s) 362
BseSI GKGCMC 1 cut(s) 907
BseXI GCAGC 5 cut(s) 277, 283, 305, 350, 959
BseYI CCCAGC 2 cut(s) 633, 1089
BsgI GTGCAG 1 cut(s) 322
BshFI GGCC 5 cut(s) 151, 552, 791, 896, 942
BshVI ATCGAT 1 cut(s) 180
BsiHKAI GWGCWC 3 cut(s) 769, 907, 1008
BsiSI CCGG 3 cut(s) 741, 788, 929
BslI CCNNNNNNNGG 3 cut(s) 40, 488, 811
BsmAI GTCTC 2 cut(s) 397, 757
BsmBI CGTCTC 1 cut(s) 397
BsnI GGCC 5 cut(s) 151, 552, 791, 896, 942
Bsp119I TTCGAA 1 cut(s) 546
Bsp1286I GDGCHC 3 cut(s) 769, 907, 1008
Bsp143I GATC 2 cut(s) 177, 584
Bsp1720I GCTNAGC 1 cut(s) 45
BspACI CCGC 2 cut(s) 611, 1084
BspANI GGCC 5 cut(s) 151, 552, 791, 896, 942
BspCNI CTCAG 3 cut(s) 85, 227, 433
BspDI ATCGAT 1 cut(s) 180
BspHI TCATGA 2 cut(s) 703, 978
BspLI GGNNCC 2 cut(s) 586, 1055
BspMAI CTGCAG 1 cut(s) 295
BspMI ACCTGC 1 cut(s) 344
BspPI GGATC 3 cut(s) 185, 579, 592
BspT104I TTCGAA 1 cut(s) 546
BsrBI CCGCTC 2 cut(s) 611, 1086
BsrDI GCAATG 1 cut(s) 373
BsrFI RCCGGY 1 cut(s) 928
BsrI ACTGG 2 cut(s) 88, 100
BssAI RCCGGY 1 cut(s) 928
BssECI CCNNGG 1 cut(s) 898
BssMI GATC 2 cut(s) 177, 584
Bst2UI CCWGG 2 cut(s) 806, 1051
Bst4CI ACNGT 3 cut(s) 196, 343, 472
Bst6I CTCTTC 3 cut(s) 334, 490, 804
BstBAI YACGTR 1 cut(s) 1060
BstBI TTCGAA 1 cut(s) 546
BstDEI CTNAG 4 cut(s) 45, 93, 214, 420
BstENI CCTNNNNNAGG 1 cut(s) 809
BstF5I GGATG 3 cut(s) 299, 656, 1000
BstH2I RGCGCY 1 cut(s) 221
BstHHI GCGC 1 cut(s) 220
BstKTI GATC 2 cut(s) 180, 587
BstMAI GTCTC 2 cut(s) 397, 757
BstMBI GATC 2 cut(s) 177, 584
BstMWI GCNNNNNNNGC 4 cut(s) 290, 296, 719, 902
BstNI CCWGG 2 cut(s) 806, 1051
BstSCI CCNGG 3 cut(s) 740, 804, 1049
BstSFI CTRYAG 1 cut(s) 291
BstSLI GKGCMC 1 cut(s) 907
BstV1I GCAGC 5 cut(s) 277, 283, 305, 350, 959
BstV2I GAAGAC 1 cut(s) 874
BstX2I RGATCY 1 cut(s) 584
BstXI CCANNNNNNTGG 1 cut(s) 199
BstYI RGATCY 1 cut(s) 584
Bsu15I ATCGAT 1 cut(s) 180
BsuI GTATCC 1 cut(s) 704
BsuRI GGCC 5 cut(s) 151, 552, 791, 896, 942
BsuTUI ATCGAT 1 cut(s) 180
BtsCI GGATG 3 cut(s) 299, 656, 1000
BtsIMutI CAGTG 2 cut(s) 192, 339
BveI ACCTGC 1 cut(s) 344
CciI TCATGA 2 cut(s) 703, 978
CfoI GCGC 1 cut(s) 220
Cfr10I RCCGGY 1 cut(s) 928
Cfr13I GGNCC 2 cut(s) 97, 895
ClaI ATCGAT 1 cut(s) 180
Csp6I GTAC 3 cut(s) 67, 451, 464
CviAII CATG 2 cut(s) 704, 979
CviQI GTAC 3 cut(s) 67, 451, 464
DdeI CTNAG 4 cut(s) 45, 93, 214, 420
DpnI GATC 2 cut(s) 179, 586
DpnII GATC 2 cut(s) 177, 584
EaeI YGGCCR 1 cut(s) 789
Eam1104I CTCTTC 3 cut(s) 334, 490, 804
EarI CTCTTC 3 cut(s) 334, 490, 804
Ecl136II GAGCTC 1 cut(s) 1006
Eco147I AGGCCT 2 cut(s) 151, 552
Eco24I GRGCYC 1 cut(s) 1008
Eco47I GGWCC 1 cut(s) 97
Eco53kI GAGCTC 1 cut(s) 1006
Eco57I CTGAAG 1 cut(s) 285
Eco72I CACGTG 1 cut(s) 1060
EcoICRI GAGCTC 1 cut(s) 1006
EcoNI CCTNNNNNAGG 1 cut(s) 809
EcoRI GAATTC 1 cut(s) 29
EcoRII CCWGG 2 cut(s) 804, 1049
EcoT38I GRGCYC 1 cut(s) 1008
Esp3I CGTCTC 1 cut(s) 397
FaeI CATG 2 cut(s) 707, 982
FalI AAGNNNNNCTT 2 cut(s) 900, 932
FatI CATG 2 cut(s) 703, 978
Fnu4HI GCNGC 5 cut(s) 291, 294, 297, 364, 948
FokI GGATG 3 cut(s) 286, 663, 1007
FriOI GRGCYC 1 cut(s) 1008
Fsp4HI GCNGC 5 cut(s) 291, 294, 297, 364, 948
FspBI CTAG 7 cut(s) 153, 243, 285, 569, 683, 776, 1032
GlaI GCGC 1 cut(s) 219
GluI GCNGC 5 cut(s) 291, 294, 297, 364, 948
GsaI CCCAGC 2 cut(s) 637, 1093
HaeII RGCGCY 1 cut(s) 221
HaeIII GGCC 5 cut(s) 151, 552, 791, 896, 942
HapII CCGG 3 cut(s) 741, 788, 929
HhaI GCGC 1 cut(s) 220
Hin1II CATG 2 cut(s) 707, 982
Hin6I GCGC 1 cut(s) 218
HinP1I GCGC 1 cut(s) 218
HincII GTYRAC 1 cut(s) 189
HindII GTYRAC 1 cut(s) 189
HindIII AAGCTT 1 cut(s) 597
HinfI GANTC 4 cut(s) 138, 572, 623, 1080
HpaII CCGG 3 cut(s) 741, 788, 929
HphI GGTGA 1 cut(s) 979
Hpy166II GTNNAC 3 cut(s) 105, 189, 905
Hpy188I TCNGA 4 cut(s) 10, 423, 577, 608
Hpy188III TCNNGA 3 cut(s) 400, 704, 979
Hpy8I GTNNAC 3 cut(s) 105, 189, 905
HpyAV CCTTC 5 cut(s) 65, 260, 542, 575, 985
HpyCH4III ACNGT 3 cut(s) 196, 343, 472
HpyCH4IV ACGT 2 cut(s) 642, 1059
HpyCH4V TGCA 7 cut(s) 293, 299, 339, 366, 713, 905, 947
HpyF10VI GCNNNNNNNGC 4 cut(s) 290, 296, 719, 902
HpyF3I CTNAG 4 cut(s) 45, 93, 214, 420
HpySE526I ACGT 2 cut(s) 642, 1059
Hsp92II CATG 2 cut(s) 707, 982
HspAI GCGC 1 cut(s) 218
Kzo9I GATC 2 cut(s) 177, 584
LmnI GCTCC 6 cut(s) 89, 238, 484, 764, 1053, 1091
Lsp1109I GCAGC 5 cut(s) 277, 283, 305, 350, 959
LweI GCATC 5 cut(s) 14, 256, 308, 466, 700
MaeI CTAG 7 cut(s) 153, 243, 285, 569, 683, 776, 1032
MaeII ACGT 2 cut(s) 642, 1059
MaeIII GTNAC 1 cut(s) 203
MalI GATC 2 cut(s) 179, 586
MbiI CCGCTC 2 cut(s) 611, 1086
MboI GATC 2 cut(s) 177, 584
MboII GAAGA 6 cut(s) 321, 507, 719, 821, 874, 994
MfeI CAATTG 1 cut(s) 533
MflI RGATCY 1 cut(s) 584
MhlI GDGCHC 3 cut(s) 769, 907, 1008
MluCI AATT 5 cut(s) 29, 38, 386, 533, 678
MlyI GAGTC 2 cut(s) 566, 1074
MmeI TCCRAC 4 cut(s) 327, 612, 808, 901
MroXI GAANNNNTTC 2 cut(s) 129, 542
MseI TTAA 4 cut(s) 146, 656, 1038, 1096
MslI CAYNNNNRTG 3 cut(s) 311, 708, 983
MspA1I CMGCKG 1 cut(s) 296
MspI CCGG 3 cut(s) 741, 788, 929
MspR9I CCNGG 3 cut(s) 742, 806, 1051
MunI CAATTG 1 cut(s) 533
MvaI CCWGG 2 cut(s) 806, 1051
MwoI GCNNNNNNNGC 4 cut(s) 290, 296, 719, 902
NciI CCSGG 1 cut(s) 742
NdeII GATC 2 cut(s) 177, 584
NlaIII CATG 2 cut(s) 707, 982
NlaIV GGNNCC 2 cut(s) 586, 1055
NspV TTCGAA 1 cut(s) 546
PagI TCATGA 2 cut(s) 703, 978
PceI AGGCCT 2 cut(s) 151, 552
PdmI GAANNNNTTC 2 cut(s) 129, 542
PfeI GAWTC 2 cut(s) 138, 623
PflMI CCANNNNNTGG 1 cut(s) 40
PfoI TCCNGGA 1 cut(s) 804
PkrI GCNGC 5 cut(s) 292, 295, 298, 365, 949
PleI GAGTC 2 cut(s) 566, 1074
PmaCI CACGTG 1 cut(s) 1060
PmlI CACGTG 1 cut(s) 1060
PpsI GAGTC 2 cut(s) 566, 1074
Ppu21I YACGTR 1 cut(s) 1060
Psp124BI GAGCTC 1 cut(s) 1008
Psp6I CCWGG 2 cut(s) 804, 1049
PspCI CACGTG 1 cut(s) 1060
PspFI CCCAGC 2 cut(s) 633, 1089
PspGI CCWGG 2 cut(s) 804, 1049
PspN4I GGNNCC 2 cut(s) 586, 1055
PspPI GGNCC 2 cut(s) 97, 895
PstI CTGCAG 1 cut(s) 295
PsuI RGATCY 1 cut(s) 584
PvuII CAGCTG 1 cut(s) 296
RsaI GTAC 3 cut(s) 68, 452, 465
RsaNI GTAC 3 cut(s) 67, 451, 464
RseI CAYNNNNRTG 3 cut(s) 311, 708, 983
SacI GAGCTC 1 cut(s) 1008
SaqAI TTAA 4 cut(s) 146, 656, 1038, 1096
SatI GCNGC 5 cut(s) 291, 294, 297, 364, 948
Sau3AI GATC 2 cut(s) 177, 584
Sau96I GGNCC 2 cut(s) 97, 895
SchI GAGTC 2 cut(s) 566, 1074
ScrFI CCNGG 3 cut(s) 742, 806, 1051
SduI GDGCHC 3 cut(s) 769, 907, 1008
SfaNI GCATC 5 cut(s) 14, 256, 308, 466, 700
SfcI CTRYAG 1 cut(s) 291
SfuI TTCGAA 1 cut(s) 546
SinI GGWCC 1 cut(s) 97
SmiMI CAYNNNNRTG 3 cut(s) 311, 708, 983
Sse9I AATT 5 cut(s) 29, 38, 386, 533, 678
SseBI AGGCCT 2 cut(s) 151, 552
SsiI CCGC 2 cut(s) 611, 1084
SspMI CTAG 7 cut(s) 153, 243, 285, 569, 683, 776, 1032
SstI GAGCTC 1 cut(s) 1008
StuI AGGCCT 2 cut(s) 151, 552
StyD4I CCNGG 3 cut(s) 740, 804, 1049
TaaI ACNGT 3 cut(s) 196, 343, 472
TaiI ACGT 2 cut(s) 645, 1062
TaqI TCGA 4 cut(s) 180, 359, 474, 546
TasI AATT 5 cut(s) 29, 38, 386, 533, 678
TatI WGTACW 2 cut(s) 66, 463
TfiI GAWTC 2 cut(s) 138, 623
Tru1I TTAA 4 cut(s) 146, 656, 1038, 1096
Tru9I TTAA 4 cut(s) 146, 656, 1038, 1096
TscAI CASTG 2 cut(s) 199, 346
TseI GCWGC 5 cut(s) 290, 293, 296, 363, 947
TspDTI ATGAA 4 cut(s) 42, 594, 720, 995
TspGWI ACGGA 1 cut(s) 777
TspRI CASTG 2 cut(s) 199, 346
Van91I CCANNNNNTGG 1 cut(s) 40
VneI GTGCAC 1 cut(s) 903
VpaK11BI GGWCC 1 cut(s) 97
XagI CCTNNNNNAGG 1 cut(s) 809
XapI RAATTY 1 cut(s) 29
XmnI GAANNNNTTC 2 cut(s) 129, 542
XspI CTAG 7 cut(s) 153, 243, 285, 569, 683, 776, 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.