AT3G14990

Protein DJ-1 homolog

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
5047376 .. 5049971
2596 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G14990.3

Sequence Viewer

Length: 1179 bp
ATGGCTTCATTTACGAAAACGGTTTTGATCCCTATTGCGCACGGTACGGAGCCTCTAGAAGCGGTGGCGATGATTACCGTGTTGCGTCGAGGTGGTGCTGACGTGACGGTGGCGTCTGTTGAGACTCAGGTTGGCGTTGATGCTTGTCATGGCATCAAGATGGTCGCTGATACTCTTCTCTCTGATATTACCGACTCTGTTTTCGACCTTATTGTGCTCCCCGGAGGGCTTCCCGGTGGCGAGACTCTTAAAAACTGTAAATCTTTAGAGAACATGGTCAAGAAACAAGACTCTGATGGCCGACTTAACGCAGCTATATGTTGTGCTCCTGCCTTGGCTCTTGGTACTTGGGGTCTACTAGAAGGCAAGAAAGCAACGGGTTACCCTGTTTTTATGGAGAAACTTGCGGCTACTTGTGCAACTGCTGTTGAGTCAAGAGTGCAAATTGATGGAAGAATAGTGACCAGTCGTGGACCAGGAACCACCATTGAATTCTCCATCACGCTTATAGAGCAGTTGTTTGGGAAAGAAAAAGCTGATGAAGTCTCCAGTATCTTGCTGCTTCGTCCTAACCCTGGTGAGGAGTTTACTTTTACTGAGCTTAACCAAACAAACTGGTCATTTGAAGATACACCACAGATTCTCGTACCCATTGCAGAGGAGTCAGAGGAAATTGAAGCTATAGCGCTTGTAGATATCCTGAGGCGGGCAAAAGCAAATGTAGTGATTGCTGCAGTTGGTAACAGTTTGGAAGTTGAAGGATCTCGCAAAGCTAAGCTAGTAGCAGAAGTTCTTCTTGATGAGGTTGCAGAGAAGTCGTTTGATCTGATTGTGTTACCTGGCGGTCTTAACGGTGCTCAAAGATTCGCAAGCTGCGAGAAGCTAGTTAATATGTTAAGGAAACAGGCAGAAGCAAACAAACCATATGGAGGAATCTGCGCATCGCCTGCTTACGTCTTCGAGCCTAATGGTTTACTCAAGGGTAAGAAGGCTACTACTCACCCAGTGGTGAGCGACAAACTTTCGGACAAGAGTCACATTGAGCACAGAGTCGTGGTAGATGGAAATGTCATAACAAGCAGAGCTCCAGGGACTGCAATGGAGTTTTCACTTGCCATTGTCGAAAAGTTTTACGGGCGAGAGAAAGCTCTTCAGCTCGGAAAGGCAACACTTGTGTGA

Protein Analysis

392

Amino Acids

41.86

Weight (kDa)

5.31

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DJ-1_PfpI PF01965 2 - 149 3.8e-36 DJ-1/PfpI family
DJ-1_PfpI PF01965 190 - 352 1.7e-43 DJ-1/PfpI family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 112
Acc16I TGCGCA 2 cut(s) 39, 940
AccI GTMKAC 1 cut(s) 355
AciI CCGC 4 cut(s) 62, 407, 706, 843
AclWI GGATC 2 cut(s) 22, 769
AcoI YGGCCR 1 cut(s) 298
AcsI RAATTY 1 cut(s) 491
AcuI CTGAAG 1 cut(s) 1136
AcyI GRCGYC 1 cut(s) 113
AdeI CACNNNGTG 1 cut(s) 1006
AfaI GTAC 3 cut(s) 46, 346, 648
AfeI AGCGCT 1 cut(s) 687
AfiI CCNNNNNNNGG 4 cut(s) 575, 580, 706, 929
AgsI TTSAA 4 cut(s) 491, 626, 677, 758
AjiI CACGTC 1 cut(s) 103
AjnI CCWGG 4 cut(s) 475, 574, 838, 1087
AleI CACNNNNGTG 1 cut(s) 1174
Alw21I GWGCWC 5 cut(s) 219, 328, 859, 1047, 1087
Alw26I GTCTC 3 cut(s) 116, 236, 550
AlwI GGATC 2 cut(s) 22, 769
AlwNI CAGNNNCTG 1 cut(s) 1094
Aor51HI AGCGCT 1 cut(s) 687
AoxI GGCC 1 cut(s) 298
ApeKI GCWGC 4 cut(s) 311, 559, 731, 873
ApoI RAATTY 1 cut(s) 491
ArsI GACNNNNNNTTYG 2 cut(s) 185, 217
Asp700I GAANNNNTTC 1 cut(s) 792
AspLEI GCGC 3 cut(s) 40, 688, 941
AspS9I GGNCC 1 cut(s) 473
AsuC2I CCSGG 2 cut(s) 222, 234
AsuHPI GGTGA 3 cut(s) 590, 992, 1021
AvaII GGWCC 1 cut(s) 473
AxyI CCTNAGG 1 cut(s) 701
BanII GRGCYC 1 cut(s) 1087
BbsI GAAGAC 1 cut(s) 949
Bbv12I GWGCWC 5 cut(s) 219, 328, 859, 1047, 1087
BbvI GCAGC 4 cut(s) 323, 546, 718, 860
BccI CCATC 5 cut(s) 154, 290, 443, 506, 1055
BcgI CGANNNNNNTGC 2 cut(s) 798, 832
BciT130I CCWGG 4 cut(s) 477, 576, 840, 1089
BcnI CCSGG 2 cut(s) 222, 234
BcoDI GTCTC 3 cut(s) 116, 236, 550
BfaI CTAG 4 cut(s) 56, 359, 779, 884
BfmI CTRYAG 2 cut(s) 681, 732
BfoI RGCGCY 1 cut(s) 689
BisI GCNGC 5 cut(s) 312, 408, 560, 732, 874
BlpI GCTNAGC 1 cut(s) 774
BlsI GCNGC 5 cut(s) 313, 409, 561, 733, 875
Bme1390I CCNGG 6 cut(s) 222, 234, 477, 576, 840, 1089
Bme18I GGWCC 1 cut(s) 473
BmgBI CACGTC 1 cut(s) 103
BmgT120I GGNCC 1 cut(s) 473
BmiI GGNNCC 2 cut(s) 51, 481
BmrFI CCNGG 6 cut(s) 222, 234, 477, 576, 840, 1089
BmrI ACTGGG 1 cut(s) 998
BmsI GCATC 3 cut(s) 130, 162, 950
BmuI ACTGGG 1 cut(s) 998
BoxI GACNNNNGTC 1 cut(s) 1032
BpiI GAAGAC 1 cut(s) 949
BpmI CTGGAG 2 cut(s) 532, 1071
Bpu1102I GCTNAGC 1 cut(s) 774
BpuEI CTTGAG 1 cut(s) 962
BpuMI CCSGG 2 cut(s) 222, 234
BsaHI GRCGYC 1 cut(s) 113
BsaJI CCNNGG 4 cut(s) 220, 333, 574, 1088
Bsc4I CCNNNNNNNGG 4 cut(s) 575, 580, 706, 929
Bse1I ACTGG 4 cut(s) 465, 549, 620, 1004
Bse21I CCTNAGG 1 cut(s) 701
Bse3DI GCAATG 2 cut(s) 651, 1104
BseBI CCWGG 4 cut(s) 477, 576, 840, 1089
BseDI CCNNGG 4 cut(s) 220, 333, 574, 1088
BseLI CCNNNNNNNGG 4 cut(s) 575, 580, 706, 929
BseMI GCAATG 2 cut(s) 651, 1104
BseMII CTCAG 3 cut(s) 140, 588, 692
BseNI ACTGG 4 cut(s) 465, 549, 620, 1004
BseRI GAGGAG 2 cut(s) 596, 674
BseXI GCAGC 4 cut(s) 323, 546, 718, 860
BshFI GGCC 1 cut(s) 300
BsiHKAI GWGCWC 5 cut(s) 219, 328, 859, 1047, 1087
BsiSI CCGG 2 cut(s) 222, 234
BslFI GGGAC 1 cut(s) 1105
BslI CCNNNNNNNGG 4 cut(s) 575, 580, 706, 929
BsmAI GTCTC 3 cut(s) 116, 236, 550
BsmFI GGGAC 1 cut(s) 1105
BsnI GGCC 1 cut(s) 300
Bsp1286I GDGCHC 5 cut(s) 219, 328, 859, 1047, 1087
Bsp143I GATC 3 cut(s) 27, 761, 823
Bsp1720I GCTNAGC 1 cut(s) 774
BspACI CCGC 4 cut(s) 62, 407, 706, 843
BspANI GGCC 1 cut(s) 300
BspCNI CTCAG 3 cut(s) 139, 589, 693
BspLI GGNNCC 2 cut(s) 51, 481
BspMAI CTGCAG 1 cut(s) 736
BspPI GGATC 2 cut(s) 22, 769
BspQI GCTCTTC 1 cut(s) 1155
BsrDI GCAATG 2 cut(s) 651, 1104
BsrI ACTGG 4 cut(s) 465, 549, 620, 1004
BssECI CCNNGG 4 cut(s) 220, 333, 574, 1088
BssMI GATC 3 cut(s) 27, 761, 823
BssNI GRCGYC 1 cut(s) 113
BssT1I CCWWGG 1 cut(s) 333
Bst2UI CCWGG 4 cut(s) 477, 576, 840, 1089
Bst4CI ACNGT 7 cut(s) 22, 44, 79, 109, 257, 746, 854
Bst6I CTCTTC 2 cut(s) 180, 1155
BstACI GRCGYC 1 cut(s) 113
BstAPI GCANNNNNTGC 1 cut(s) 947
BstC8I GCNNGC 3 cut(s) 708, 871, 948
BstDEI CTNAG 4 cut(s) 126, 597, 701, 774
BstEII GGTNACC 1 cut(s) 380
BstH2I RGCGCY 1 cut(s) 689
BstHHI GCGC 3 cut(s) 40, 688, 941
BstKTI GATC 3 cut(s) 30, 764, 826
BstMAI GTCTC 3 cut(s) 116, 236, 550
BstMBI GATC 3 cut(s) 27, 761, 823
BstMWI GCNNNNNNNGC 3 cut(s) 416, 511, 947
BstNI CCWGG 4 cut(s) 477, 576, 840, 1089
BstPAI GACNNNNGTC 1 cut(s) 1032
BstPI GGTNACC 1 cut(s) 380
BstSCI CCNGG 6 cut(s) 220, 232, 475, 574, 838, 1087
BstSFI CTRYAG 2 cut(s) 681, 732
BstV1I GCAGC 4 cut(s) 323, 546, 718, 860
BstV2I GAAGAC 1 cut(s) 949
BstX2I RGATCY 1 cut(s) 761
BstYI RGATCY 1 cut(s) 761
Bsu36I CCTNAGG 1 cut(s) 701
BsuRI GGCC 1 cut(s) 300
BtgZI GCGATG 2 cut(s) 83, 927
BtrI CACGTC 1 cut(s) 103
BtsIMutI CAGTG 1 cut(s) 1011
Cac8I GCNNGC 3 cut(s) 708, 871, 948
CaiI CAGNNNCTG 1 cut(s) 1094
CfoI GCGC 3 cut(s) 40, 688, 941
Cfr13I GGNCC 1 cut(s) 473
CseI GACGC 2 cut(s) 74, 102
Csp6I GTAC 3 cut(s) 45, 345, 647
CviAII CATG 2 cut(s) 149, 274
CviQI GTAC 3 cut(s) 45, 345, 647
DdeI CTNAG 4 cut(s) 126, 597, 701, 774
DpnI GATC 3 cut(s) 29, 763, 825
DpnII GATC 3 cut(s) 27, 761, 823
DraIII CACNNNGTG 1 cut(s) 1006
DrdI GACNNNNNNGTC 1 cut(s) 112
DseDI GACNNNNNNGTC 1 cut(s) 112
EaeI YGGCCR 1 cut(s) 298
Eam1104I CTCTTC 2 cut(s) 180, 1155
EarI CTCTTC 2 cut(s) 180, 1155
Ecl136II GAGCTC 1 cut(s) 1085
Eco130I CCWWGG 1 cut(s) 333
Eco24I GRGCYC 1 cut(s) 1087
Eco32I GATATC 1 cut(s) 697
Eco47I GGWCC 1 cut(s) 473
Eco47III AGCGCT 1 cut(s) 687
Eco53kI GAGCTC 1 cut(s) 1085
Eco57I CTGAAG 1 cut(s) 1136
Eco81I CCTNAGG 1 cut(s) 701
Eco91I GGTNACC 1 cut(s) 380
EcoICRI GAGCTC 1 cut(s) 1085
EcoO65I GGTNACC 1 cut(s) 380
EcoRI GAATTC 1 cut(s) 491
EcoRII CCWGG 4 cut(s) 475, 574, 838, 1087
EcoRV GATATC 1 cut(s) 697
EcoT14I CCWWGG 1 cut(s) 333
EcoT38I GRGCYC 1 cut(s) 1087
ErhI CCWWGG 1 cut(s) 333
FaeI CATG 2 cut(s) 152, 277
FalI AAGNNNNNCTT 2 cut(s) 780, 812
FaqI GGGAC 1 cut(s) 1105
FatI CATG 2 cut(s) 148, 273
FauI CCCGC 1 cut(s) 699
FauNDI CATATG 1 cut(s) 925
FblI GTMKAC 1 cut(s) 355
Fnu4HI GCNGC 5 cut(s) 312, 408, 560, 732, 874
FriOI GRGCYC 1 cut(s) 1087
Fsp4HI GCNGC 5 cut(s) 312, 408, 560, 732, 874
FspBI CTAG 4 cut(s) 56, 359, 779, 884
FspI TGCGCA 2 cut(s) 39, 940
GlaI GCGC 3 cut(s) 39, 687, 940
GluI GCNGC 5 cut(s) 312, 408, 560, 732, 874
GsuI CTGGAG 2 cut(s) 532, 1071
HaeII RGCGCY 1 cut(s) 689
HaeIII GGCC 1 cut(s) 300
HapII CCGG 2 cut(s) 222, 234
HgaI GACGC 2 cut(s) 74, 102
HhaI GCGC 3 cut(s) 40, 688, 941
Hin1I GRCGYC 1 cut(s) 113
Hin1II CATG 2 cut(s) 152, 277
Hin6I GCGC 3 cut(s) 38, 686, 939
HinP1I GCGC 3 cut(s) 38, 686, 939
HpaII CCGG 2 cut(s) 222, 234
HphI GGTGA 3 cut(s) 590, 992, 1021
Hpy166II GTNNAC 4 cut(s) 356, 473, 588, 974
Hpy188I TCNGA 6 cut(s) 184, 295, 667, 828, 1027, 1160
Hpy188III TCNNGA 6 cut(s) 56, 157, 280, 435, 700, 797
Hpy8I GTNNAC 4 cut(s) 356, 473, 588, 974
Hpy99I CGWCG 1 cut(s) 90
HpyAV CCTTC 3 cut(s) 356, 752, 982
HpyCH4III ACNGT 7 cut(s) 22, 44, 79, 109, 257, 746, 854
HpyCH4IV ACGT 2 cut(s) 102, 954
HpyCH4V TGCA 6 cut(s) 419, 442, 656, 734, 809, 1097
HpyF10VI GCNNNNNNNGC 3 cut(s) 416, 511, 947
HpyF3I CTNAG 4 cut(s) 126, 597, 701, 774
HpySE526I ACGT 2 cut(s) 102, 954
Hsp92I GRCGYC 1 cut(s) 113
Hsp92II CATG 2 cut(s) 152, 277
HspAI GCGC 3 cut(s) 38, 686, 939
Kzo9I GATC 3 cut(s) 27, 761, 823
LguI GCTCTTC 1 cut(s) 1155
LmnI GCTCC 4 cut(s) 49, 222, 331, 1090
Lsp1109I GCAGC 4 cut(s) 323, 546, 718, 860
LweI GCATC 3 cut(s) 130, 162, 950
MaeI CTAG 4 cut(s) 56, 359, 779, 884
MaeII ACGT 2 cut(s) 102, 954
MaeIII GTNAC 6 cut(s) 103, 380, 460, 740, 834, 1034
MalI GATC 3 cut(s) 29, 763, 825
MboI GATC 3 cut(s) 27, 761, 823
MboII GAAGA 6 cut(s) 167, 465, 638, 785, 949, 1142
MflI RGATCY 1 cut(s) 761
MhlI GDGCHC 5 cut(s) 219, 328, 859, 1047, 1087
MluCI AATT 3 cut(s) 444, 491, 672
MlyI GAGTC 8 cut(s) 118, 188, 238, 284, 440, 671, 1042, 1059
MnlI CCTC 9 cut(s) 63, 83, 218, 574, 652, 661, 696, 796, 923
MroXI GAANNNNTTC 1 cut(s) 792
MseI TTAA 6 cut(s) 249, 306, 603, 849, 888, 896
MslI CAYNNNNRTG 2 cut(s) 158, 1174
MspI CCGG 2 cut(s) 222, 234
MspR9I CCNGG 6 cut(s) 222, 234, 477, 576, 840, 1089
MvaI CCWGG 4 cut(s) 477, 576, 840, 1089
MwoI GCNNNNNNNGC 3 cut(s) 416, 511, 947
NciI CCSGG 2 cut(s) 222, 234
NdeI CATATG 1 cut(s) 925
NdeII GATC 3 cut(s) 27, 761, 823
NlaIII CATG 2 cut(s) 152, 277
NlaIV GGNNCC 2 cut(s) 51, 481
NmuCI GTSAC 3 cut(s) 103, 460, 1034
NsbI TGCGCA 2 cut(s) 39, 940
OliI CACNNNNGTG 1 cut(s) 1174
PciSI GCTCTTC 1 cut(s) 1155
PcsI WCGNNNNNNNCGW 1 cut(s) 873
PdmI GAANNNNTTC 1 cut(s) 792
PfeI GAWTC 3 cut(s) 640, 864, 933
PkrI GCNGC 5 cut(s) 313, 409, 561, 733, 875
PleI GAGTC 8 cut(s) 118, 188, 238, 284, 439, 670, 1041, 1058
PpsI GAGTC 8 cut(s) 118, 188, 238, 284, 439, 670, 1041, 1058
PshAI GACNNNNGTC 1 cut(s) 1032
Psp124BI GAGCTC 1 cut(s) 1087
Psp6I CCWGG 4 cut(s) 475, 574, 838, 1087
PspEI GGTNACC 1 cut(s) 380
PspGI CCWGG 4 cut(s) 475, 574, 838, 1087
PspN4I GGNNCC 2 cut(s) 51, 481
PspPI GGNCC 1 cut(s) 473
PsrI GAACNNNNNNTAC 2 cut(s) 774, 806
PstI CTGCAG 1 cut(s) 736
PstNI CAGNNNCTG 1 cut(s) 1094
PsuI RGATCY 1 cut(s) 761
RsaI GTAC 3 cut(s) 46, 346, 648
RsaNI GTAC 3 cut(s) 45, 345, 647
RseI CAYNNNNRTG 2 cut(s) 158, 1174
SacI GAGCTC 1 cut(s) 1087
SapI GCTCTTC 1 cut(s) 1155
SaqAI TTAA 6 cut(s) 249, 306, 603, 849, 888, 896
SatI GCNGC 5 cut(s) 312, 408, 560, 732, 874
Sau3AI GATC 3 cut(s) 27, 761, 823
Sau96I GGNCC 1 cut(s) 473
SchI GAGTC 8 cut(s) 118, 188, 238, 284, 440, 671, 1042, 1059
ScrFI CCNGG 6 cut(s) 222, 234, 477, 576, 840, 1089
SduI GDGCHC 5 cut(s) 219, 328, 859, 1047, 1087
SfaNI GCATC 3 cut(s) 130, 162, 950
SfcI CTRYAG 2 cut(s) 681, 732
SinI GGWCC 1 cut(s) 473
SmiMI CAYNNNNRTG 2 cut(s) 158, 1174
SmlI CTYRAG 1 cut(s) 977
SmoI CTYRAG 1 cut(s) 977
Sse9I AATT 3 cut(s) 444, 491, 672
SsiI CCGC 4 cut(s) 62, 407, 706, 843
SspMI CTAG 4 cut(s) 56, 359, 779, 884
SstI GAGCTC 1 cut(s) 1087
StyD4I CCNGG 6 cut(s) 220, 232, 475, 574, 838, 1087
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 7 cut(s) 22, 44, 79, 109, 257, 746, 854
TaiI ACGT 2 cut(s) 105, 957
TaqI TCGA 4 cut(s) 88, 204, 960, 1122
TasI AATT 3 cut(s) 444, 491, 672
TauI GCSGC 1 cut(s) 410
TfiI GAWTC 3 cut(s) 640, 864, 933
Tru1I TTAA 6 cut(s) 249, 306, 603, 849, 888, 896
Tru9I TTAA 6 cut(s) 249, 306, 603, 849, 888, 896
TscAI CASTG 1 cut(s) 1011
TseFI GTSAC 3 cut(s) 103, 460, 1034
TseI GCWGC 4 cut(s) 311, 559, 731, 873
Tsp45I GTSAC 3 cut(s) 103, 460, 1034
TspDTI ATGAA 1 cut(s) 555
TspGWI ACGGA 1 cut(s) 62
TspRI CASTG 1 cut(s) 1011
VpaK11BI GGWCC 1 cut(s) 473
XapI RAATTY 1 cut(s) 491
XbaI TCTAGA 1 cut(s) 55
XmiI GTMKAC 1 cut(s) 355
XmnI GAANNNNTTC 1 cut(s) 792
XspI CTAG 4 cut(s) 56, 359, 779, 884
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.