Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005791

Physical Location & Seq

Genomic Coordinates Reverse (-)

11019871 .. 11022738

Gene Structure 2868 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0124700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGTCGATCATGTCCTTGCAATTCCCATTGGCGGCAGTCCTAATCCTATTATCGGCGGCTAGTACTACGACAACAGCATCTGCTGCTCAAGCCCTGCATGGCTGCTCTGACAAGTGCGGCAATCTCACAGTTCCATATCCATTTGGCATGAAGGTGGGTTGTTACCTGGTACATAGGTTCTACATCAACTGTAGCCAGGGGGCCCAACAGGACGAACTCCCAACAGCCTACTTGGGGGACACCAATATCATTGTTACCAGCATATCCATAGACGTTGGGGAGTTGCGAATATTGAGCTATAGAGGGAAAGATTGTTACAATGAAACGGGCAATCAAACTTACCATAACAGACCTAAGTTAAGGATGGGACCTCCATACACCATATCTGACACCAAAAACAAGTTCTATGCCGTTGGTTGTGACACTTACGCAATCATGCGAGGCTTCCGAGGGGAAGAAGAATTCATTACTGGGTGCATGTCAGTATGCGACAGCCTTGACAGTGTTGATAACAACTCTTGCTCTGGCGTTGGGTGTTGCCAGACTAACATCCCCAGTGGACTGGACAATCTTAATCTGAGTTTGGGTAGCTACTTCAATCATTCGTATGTGTCGGACTTTAACCCCTGCAGCTACGCCTTCATTGCAGTGAAGGGCCAATTCAATTTCACCTCTTCTAGTTTTAAACAACTGAATGACACTGAACGACTTCCACTGGTCCTTAATTGGGCCATTGGGAATCACACAGACCCCTGTCATGAAGCTCAGAAAAGGAAGGATTTCGCATGCAGAGCTAATAGCATATGCAAAAACCGGCCTACCAATGGCAATGGGTCTGTAGGTTATTTGTGCGAGTGTTCGCCTGGTTATGAAGGAAACCCGTACCACCCAGATGGTTGCAAAGATATTGATGAGTGCAGGGCTTTCAATCCCTGCCAGAACGGACAGTGCTTAAATACTCCAGGAAATCACTCTTGTTCATGTCACAAAGGATACAAAAACGACGGCATGAATGACAAGATTTGCATCAAAGACGATTCCAAAAGACGCTCAAAGATCGTTCTAGTGCTTATGGTTTCATTGGGTGTAAGTGTGGGCTTCTTGGTTTTATTCCTTGGAATTTCGTGGATATGTTGGGGAATGAAGAAAAGAGAGTTCATTAAACTCAAAGAAAAGCACTTCAAAGAGAATGGTGGCTTATTGTTACTGCAACAACTCGCTAGTCATGGAAGCTCGATGAAGACAACAAAAATCTTTACTGCTGAAGAACTTGAGAAGGCAACAAACAACTACCATGAGAGTAGAGTCCTTGGAGAAGGAGGTTATGGAACAGTGTACAAAGGAATACTACCGGATGACACAATGGTTGCCATAAAGAAGTCGAAAGGTGCTGCCCTTACCCAGAGTGATCAATTTGTTAACGAGGTGATTGTTCTTTCTCAAATCAACCACAGAAATGTGGTAAAGCTATTGGGTTGTTGTTTAGAAACGGAAGTACCTTTACTAGTATACGAATTCATTACCCATGGCACTCTTTATGAGCACATTCATAAAAAAGGATCATCACTCCCATTTGAATTACGAATGAAGATAGCAACTCAAAGCGCGGAAGCACTGTCCCACTTACACTCCTCAATTTCCACACCAATAATACATCGAGATGTGAAAACATCAAATATTCTGTTAGATGATGATTATACGGCAAAAGTGTCAGATTTTGGAGCTTCCCGATTGGTTCCTTCAGGTCAAACTGATATACAAACTTTAGTGCTTGGGACATTTGGATACCTGGACCCTGAATATCTGCAATCAAACCAACTAACAGAAAAGAGTGATGTTTACAGCTTTGGAGTTGTCCTAGTGGAGCTACTAACAAGCAAAGTGCCGGTTTCTAAAGATAGATGCTTAACAAGCATCTTTCTTGCTTCCATGGAAGAAGGTTGGTTGAATCAAATACTTGATGATGGTATAGTGAATGAGGGAAACATTGAGACGGTAAAGAAAGTGGCCAATCTCGCAAAACGATGCTTGAGGGTAAAAGGGGAGGAAAGGCCTACCATGAAAGAAGTTGCGAAAGAGTTAGAGGAAATGAGTGTCATGGCAAAACATCCGTGGGGATTTAATGCTAATTTTTGCGAAGAAGAGACTGAATACTTGCTTGTGTCGGTTAATTCAGACGCTTATGTTGTGGGTAATGGAGAAGGTGATTGCAGTTCTAGTGGTCTAACCAGTGGTATGACCACTGCGTATGACAGCATGCAAATCGAACAGTTAATGCCACATGATGGTGGACGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005911 GO:0006081 GO:0006082 GO:0006089 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009438 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0019172 GO:0019249 GO:0019752 GO:0030054 GO:0031090 GO:0032787 GO:0042180 GO:0042182 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044248 GO:0044249 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046185 GO:0046394 GO:0046686 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051596 GO:0055044 GO:0061727 GO:0065007 GO:0071704 GO:0071944 GO:0072330 GO:0080134 GO:0080135 GO:0098588 GO:0098805 GO:1900407 GO:1900409 GO:1901575 GO:1901576 GO:1901615 GO:1901617 GO:1902882 GO:1902884

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DJ-1_PfpI

Protein Analysis

765

Amino Acids

84.28

Weight (kDa)

5.93

Isoelectric Point (pI)

35.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	35 - 97	2.4e-07	Wall-associated receptor kinase galacturonan-binding
EGF_CA	PF07645	302 - 337	7.5e-06	Calcium-binding EGF domain
Pkinase	PF00069	431 - 692	1.6e-49	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	434 - 694	3e-50	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005791)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53280 AT1G53280 AT3G14990 AT3G14990 AT3G14990
fragaria_vesca	FvH4_3g18570 FvH4_3g18570 FvH4_3g18570
malus_domestica	MD03G1241000.v1.1 MD11G1260500.v1.1
prunus_persica	Prupe.4G167800_v2.0.a1 Prupe.4G167900_v2.0.a1
pyrus_communis	pycom11g22990
rosa_chinensis	RchiOBHm_Chr5g0031321 RchiOBHm_Chr5g0031331 RchiOBHm_Chr5g0031361 RchiOBHm_Chr5g0031371
rosa_laevigata	RLG00000033301
rosa_multiflora	Rmu_sc0007782.1_g000014 Rmu_sc0018148.1_g000002
rosa_roxburghii	Rroxscaffold_1G00048960
rosa_rugosa	Rorug05G0124300 Rorug05G0124700
rosa_samantha	Rh5AG217400 Rh5BG217100 Rh5CG240700 Rh5DG222400
rosa_wichuraiana	Rw5G019880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2285
AccI	GTMKAC	1 cut(s)	1509
AccII	CGCG	1 cut(s)	1607
AciI	CCGC	4 cut(s)	32, 56, 117, 1607
AclWI	GGATC	1 cut(s)	1567
AcoI	YGGCCR	1 cut(s)	2007
AcsI	RAATTY	3 cut(s)	461, 1119, 1514
AcuI	CTGAAG	2 cut(s)	1284, 1725
AfaI	GTAC	5 cut(s)	64, 171, 884, 1337, 1497
AfiI	CCNNNNNNNGG	6 cut(s)	31, 52, 234, 727, 824, 2285
AgsI	TTSAA	6 cut(s)	598, 664, 928, 1183, 1577, 1948
AhlI	ACTAGT	1 cut(s)	1504
AjnI	CCWGG	5 cut(s)	165, 195, 862, 961, 1788
AjuI	GAANNNNNNNTTGG	2 cut(s)	386, 418
Alw21I	GWGCWC	1 cut(s)	1545
Alw26I	GTCTC	2 cut(s)	1985, 2138
AlwI	GGATC	1 cut(s)	1567
AlwNI	CAGNNNCTG	1 cut(s)	80
AoxI	GGCC	6 cut(s)	201, 655, 729, 815, 2007, 2051
ApaI	GGGCCC	1 cut(s)	205
ApeKI	GCWGC	4 cut(s)	83, 102, 630, 1391
ApoI	RAATTY	3 cut(s)	461, 1119, 1514
Asp700I	GAANNNNTTC	2 cut(s)	708, 779
AspLEI	GCGC	1 cut(s)	1607
AspS9I	GGNCC	7 cut(s)	201, 202, 368, 655, 718, 729, 1792
AsuHPI	GGTGA	3 cut(s)	661, 1438, 2216
AvaII	GGWCC	3 cut(s)	368, 718, 1792
BaeGI	GKGCMC	1 cut(s)	205
BaeI	ACNNNNGTAYC	4 cut(s)	161, 194, 1479, 1512
BalI	TGGCCA	1 cut(s)	2009
BanII	GRGCYC	1 cut(s)	205
BarI	GAAGNNNNNNTAC	2 cut(s)	1485, 1517
BbsI	GAAGAC	1 cut(s)	1247
Bbv12I	GWGCWC	1 cut(s)	1545
BbvI	GCAGC	4 cut(s)	70, 89, 642, 1378
BccI	CCATC	4 cut(s)	358, 887, 1958, 2279
BceAI	ACGGC	3 cut(s)	395, 1021, 1716
BcgI	CGANNNNNNTGC	2 cut(s)	2245, 2279
BciT130I	CCWGG	5 cut(s)	167, 197, 864, 963, 1790
BciVI	GTATCC	2 cut(s)	986, 1778
BclI	TGATCA	1 cut(s)	1408
BcoDI	GTCTC	2 cut(s)	1985, 2138
BcuI	ACTAGT	1 cut(s)	1504
BfaI	CTAG	7 cut(s)	60, 678, 1064, 1221, 1505, 1859, 2217
BfmI	CTRYAG	4 cut(s)	190, 298, 628, 837
BfuI	GTATCC	2 cut(s)	986, 1778
BisI	GCNGC	7 cut(s)	33, 57, 84, 103, 118, 631, 1392
BlsI	GCNGC	7 cut(s)	34, 58, 85, 104, 119, 632, 1393
BmcAI	AGTACT	1 cut(s)	64
Bme1390I	CCNGG	5 cut(s)	167, 197, 864, 963, 1790
Bme18I	GGWCC	3 cut(s)	368, 718, 1792
BmgT120I	GGNCC	7 cut(s)	201, 202, 368, 655, 718, 729, 1792
BmiI	GGNNCC	5 cut(s)	202, 203, 369, 1737, 1794
BmrFI	CCNGG	5 cut(s)	167, 197, 864, 963, 1790
BmrI	ACTGGG	2 cut(s)	480, 549
BmsI	GCATC	5 cut(s)	86, 1035, 1892, 1923, 2015
BmuI	ACTGGG	2 cut(s)	480, 549
BoxI	GACNNNNGTC	1 cut(s)	753
BpiI	GAAGAC	1 cut(s)	1247
BpmI	CTGGAG	1 cut(s)	945
BpuEI	CTTGAG	3 cut(s)	72, 1292, 2050
BsaBI	GATNNNNATC	1 cut(s)	1025
BsaJI	CCNNGG	7 cut(s)	196, 448, 1114, 1309, 1525, 1929, 2111
BsaWI	WCCGGW	1 cut(s)	1351
BsaXI	ACNNNNNCTCC	2 cut(s)	1613, 1643
Bsc4I	CCNNNNNNNGG	6 cut(s)	31, 52, 234, 727, 824, 2285
Bse118I	RCCGGY	2 cut(s)	813, 1885
Bse1I	ACTGG	5 cut(s)	475, 555, 567, 720, 2229
Bse3DI	GCAATG	2 cut(s)	642, 835
Bse8I	GATNNNNATC	1 cut(s)	1025
BseBI	CCWGG	5 cut(s)	167, 197, 864, 963, 1790
BseDI	CCNNGG	7 cut(s)	196, 448, 1114, 1309, 1525, 1929, 2111
BseGI	GGATG	4 cut(s)	369, 549, 1360, 2107
BseJI	GATNNNNATC	1 cut(s)	1025
BseLI	CCNNNNNNNGG	6 cut(s)	31, 52, 234, 727, 824, 2285
BseMI	GCAATG	2 cut(s)	642, 835
BseMII	CTCAG	2 cut(s)	569, 779
BseNI	ACTGG	5 cut(s)	475, 555, 567, 720, 2229
BseRI	GAGGAG	1 cut(s)	1621
BseSI	GKGCMC	1 cut(s)	205
BseXI	GCAGC	4 cut(s)	70, 89, 642, 1378
BsgI	GTGCAG	1 cut(s)	937
Bsh1236I	CGCG	1 cut(s)	1607
BshFI	GGCC	6 cut(s)	203, 657, 731, 817, 2009, 2053
BsiHKAI	GWGCWC	1 cut(s)	1545
BsiSI	CCGG	3 cut(s)	814, 1352, 1886
BslFI	GGGAC	4 cut(s)	251, 381, 1603, 1789
BslI	CCNNNNNNNGG	6 cut(s)	31, 52, 234, 727, 824, 2285
BsmAI	GTCTC	2 cut(s)	1985, 2138
BsmBI	CGTCTC	1 cut(s)	1985
BsmFI	GGGAC	4 cut(s)	251, 381, 1603, 1789
BsnI	GGCC	6 cut(s)	203, 657, 731, 817, 2009, 2053
Bsp120I	GGGCCC	1 cut(s)	201
Bsp1286I	GDGCHC	2 cut(s)	205, 1545
Bsp1407I	TGTACA	1 cut(s)	1335
Bsp143I	GATC	4 cut(s)	6, 1056, 1408, 1559
Bsp19I	CCATGG	2 cut(s)	1525, 1929
BspACI	CCGC	4 cut(s)	32, 56, 117, 1607
BspANI	GGCC	6 cut(s)	203, 657, 731, 817, 2009, 2053
BspCNI	CTCAG	2 cut(s)	570, 778
BspFNI	CGCG	1 cut(s)	1607
BspHI	TCATGA	1 cut(s)	757
BspLI	GGNNCC	5 cut(s)	202, 203, 369, 1737, 1794
BspMAI	CTGCAG	1 cut(s)	632
BspPI	GGATC	1 cut(s)	1567
BsrDI	GCAATG	2 cut(s)	642, 835
BsrFI	RCCGGY	2 cut(s)	813, 1885
BsrGI	TGTACA	1 cut(s)	1335
BsrI	ACTGG	5 cut(s)	475, 555, 567, 720, 2229
BssAI	RCCGGY	2 cut(s)	813, 1885
BssECI	CCNNGG	7 cut(s)	196, 448, 1114, 1309, 1525, 1929, 2111
BssMI	GATC	4 cut(s)	6, 1056, 1408, 1559
BssNAI	GTATAC	1 cut(s)	1510
BssT1I	CCWWGG	4 cut(s)	1114, 1309, 1525, 1929
Bst1107I	GTATAC	1 cut(s)	1510
Bst2UI	CCWGG	5 cut(s)	167, 197, 864, 963, 1790
Bst4CI	ACNGT	8 cut(s)	130, 191, 503, 948, 1333, 1617, 1996, 2271
Bst6I	CTCTTC	2 cut(s)	679, 2136
BstAPI	GCANNNNNTGC	1 cut(s)	83
BstAUI	TGTACA	1 cut(s)	1335
BstC8I	GCNNGC	2 cut(s)	787, 2258
BstDEI	CTNAG	3 cut(s)	354, 578, 765
BstDSI	CCRYGG	3 cut(s)	1525, 1929, 2111
BstF5I	GGATG	4 cut(s)	369, 549, 1360, 2107
BstFNI	CGCG	1 cut(s)	1607
BstHHI	GCGC	1 cut(s)	1607
BstKTI	GATC	4 cut(s)	9, 1059, 1411, 1562
BstMAI	GTCTC	2 cut(s)	1985, 2138
BstMBI	GATC	4 cut(s)	6, 1056, 1408, 1559
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 89, 644, 791, 1911, 2015
BstNI	CCWGG	5 cut(s)	167, 197, 864, 963, 1790
BstNSI	RCATGY	3 cut(s)	481, 789, 2260
BstPAI	GACNNNNGTC	1 cut(s)	753
BstSCI	CCNGG	5 cut(s)	165, 195, 862, 961, 1788
BstSFI	CTRYAG	4 cut(s)	190, 298, 628, 837
BstSLI	GKGCMC	1 cut(s)	205
BstUI	CGCG	1 cut(s)	1607
BstV1I	GCAGC	4 cut(s)	70, 89, 642, 1378
BstV2I	GAAGAC	1 cut(s)	1247
BstXI	CCANNNNNNTGG	2 cut(s)	562, 893
BstZ17I	GTATAC	1 cut(s)	1510
BsuI	GTATCC	2 cut(s)	986, 1778
BsuRI	GGCC	6 cut(s)	203, 657, 731, 817, 2009, 2053
BtgI	CCRYGG	3 cut(s)	1525, 1929, 2111
BtsCI	GGATG	4 cut(s)	369, 549, 1360, 2107
BtsI	GCAGTG	2 cut(s)	654, 2241
Cac8I	GCNNGC	2 cut(s)	787, 2258
CaiI	CAGNNNCTG	1 cut(s)	80
CciI	TCATGA	1 cut(s)	757
CfoI	GCGC	1 cut(s)	1607
Cfr10I	RCCGGY	2 cut(s)	813, 1885
Cfr13I	GGNCC	7 cut(s)	201, 202, 368, 655, 718, 729, 1792
CseI	GACGC	2 cut(s)	1056, 2186
CsiI	ACCWGGT	1 cut(s)	165
Csp6I	GTAC	5 cut(s)	63, 170, 883, 1336, 1496
CviQI	GTAC	5 cut(s)	63, 170, 883, 1336, 1496
DdeI	CTNAG	3 cut(s)	354, 578, 765
DpnI	GATC	4 cut(s)	8, 1058, 1410, 1561
DpnII	GATC	4 cut(s)	6, 1056, 1408, 1559
DraI	TTTAAA	1 cut(s)	685
EaeI	YGGCCR	1 cut(s)	2007
Eam1104I	CTCTTC	2 cut(s)	679, 2136
EarI	CTCTTC	2 cut(s)	679, 2136
Eco130I	CCWWGG	4 cut(s)	1114, 1309, 1525, 1929
Eco147I	AGGCCT	1 cut(s)	2053
Eco24I	GRGCYC	1 cut(s)	205
Eco47I	GGWCC	3 cut(s)	368, 718, 1792
Eco57I	CTGAAG	2 cut(s)	1284, 1725
EcoO109I	RGGNCCY	2 cut(s)	201, 368
EcoRI	GAATTC	2 cut(s)	461, 1514
EcoRII	CCWGG	5 cut(s)	165, 195, 862, 961, 1788
EcoT14I	CCWWGG	4 cut(s)	1114, 1309, 1525, 1929
EcoT38I	GRGCYC	1 cut(s)	205
ErhI	CCWWGG	4 cut(s)	1114, 1309, 1525, 1929
Esp3I	CGTCTC	1 cut(s)	1985
FaqI	GGGAC	4 cut(s)	251, 381, 1603, 1789
FauNDI	CATATG	1 cut(s)	803
FbaI	TGATCA	1 cut(s)	1408
FblI	GTMKAC	1 cut(s)	1509
Fnu4HI	GCNGC	7 cut(s)	33, 57, 84, 103, 118, 631, 1392
FokI	GGATG	4 cut(s)	376, 536, 1367, 2094
FriOI	GRGCYC	1 cut(s)	205
Fsp4HI	GCNGC	7 cut(s)	33, 57, 84, 103, 118, 631, 1392
FspBI	CTAG	7 cut(s)	60, 678, 1064, 1221, 1505, 1859, 2217
GlaI	GCGC	1 cut(s)	1606
GluI	GCNGC	7 cut(s)	33, 57, 84, 103, 118, 631, 1392
GsuI	CTGGAG	1 cut(s)	945
HaeIII	GGCC	6 cut(s)	203, 657, 731, 817, 2009, 2053
HapII	CCGG	3 cut(s)	814, 1352, 1886
HgaI	GACGC	2 cut(s)	1056, 2186
HhaI	GCGC	1 cut(s)	1607
Hin6I	GCGC	1 cut(s)	1605
HinP1I	GCGC	1 cut(s)	1605
HincII	GTYRAC	1 cut(s)	1420
HindII	GTYRAC	1 cut(s)	1420
HinfI	GANTC	4 cut(s)	739, 1037, 1305, 1948
HpaI	GTTAAC	1 cut(s)	1420
HpaII	CCGG	3 cut(s)	814, 1352, 1886
HphI	GGTGA	3 cut(s)	661, 1438, 2216
Hpy166II	GTNNAC	6 cut(s)	560, 1336, 1420, 1510, 1840, 2291
Hpy188I	TCNGA	8 cut(s)	109, 388, 449, 579, 616, 768, 1714, 2176
Hpy188III	TCNNGA	3 cut(s)	758, 1658, 1728
Hpy8I	GTNNAC	6 cut(s)	560, 1336, 1420, 1510, 1840, 2291
Hpy99I	CGWCG	1 cut(s)	1007
HpyCH4III	ACNGT	8 cut(s)	130, 191, 503, 948, 1333, 1617, 1996, 2271
HpyCH4IV	ACGT	1 cut(s)	273
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 89, 644, 791, 1911, 2015
HpyF3I	CTNAG	3 cut(s)	354, 578, 765
HpySE526I	ACGT	1 cut(s)	273
HspAI	GCGC	1 cut(s)	1605
Ksp22I	TGATCA	1 cut(s)	1408
KspAI	GTTAAC	1 cut(s)	1420
Kzo9I	GATC	4 cut(s)	6, 1056, 1408, 1559
LmnI	GCTCC	2 cut(s)	1721, 1864
Lsp1109I	GCAGC	4 cut(s)	70, 89, 642, 1378
LweI	GCATC	5 cut(s)	86, 1035, 1892, 1923, 2015
MabI	ACCWGGT	1 cut(s)	165
MaeI	CTAG	7 cut(s)	60, 678, 1064, 1221, 1505, 1859, 2217
MaeII	ACGT	1 cut(s)	273
MaeIII	GTNAC	6 cut(s)	161, 253, 314, 419, 983, 1203
MalI	GATC	4 cut(s)	8, 1058, 1410, 1561
MboI	GATC	4 cut(s)	6, 1056, 1408, 1559
MhlI	GDGCHC	2 cut(s)	205, 1545
MlsI	TGGCCA	1 cut(s)	2009
MluNI	TGGCCA	1 cut(s)	2009
MlyI	GAGTC	1 cut(s)	1314
MmeI	TCCRAC	1 cut(s)	594
Mox20I	TGGCCA	1 cut(s)	2009
MroXI	GAANNNNTTC	2 cut(s)	708, 779
MscI	TGGCCA	1 cut(s)	2009
MslI	CAYNNNNRTG	7 cut(s)	152, 606, 647, 891, 1455, 1659, 2286
Msp20I	TGGCCA	1 cut(s)	2009
MspI	CCGG	3 cut(s)	814, 1352, 1886
MspR9I	CCNGG	5 cut(s)	167, 197, 864, 963, 1790
MvaI	CCWGG	5 cut(s)	167, 197, 864, 963, 1790
MvnI	CGCG	1 cut(s)	1607
MwoI	GCNNNNNNNGC	6 cut(s)	83, 89, 644, 791, 1911, 2015
NcoI	CCATGG	2 cut(s)	1525, 1929
NdeI	CATATG	1 cut(s)	803
NdeII	GATC	4 cut(s)	6, 1056, 1408, 1559
NlaIV	GGNNCC	5 cut(s)	202, 203, 369, 1737, 1794
NmuCI	GTSAC	2 cut(s)	419, 983
NspI	RCATGY	3 cut(s)	481, 789, 2260
PaeI	GCATGC	2 cut(s)	789, 2260
PagI	TCATGA	1 cut(s)	757
PceI	AGGCCT	1 cut(s)	2053
PdmI	GAANNNNTTC	2 cut(s)	708, 779
PfeI	GAWTC	3 cut(s)	739, 1037, 1948
PflMI	CCANNNNNTGG	1 cut(s)	2285
PfoI	TCCNGGA	1 cut(s)	961
PkrI	GCNGC	7 cut(s)	34, 58, 85, 104, 119, 632, 1393
PleI	GAGTC	1 cut(s)	1313
PpsI	GAGTC	1 cut(s)	1313
PpuMI	RGGWCCY	1 cut(s)	368
PshAI	GACNNNNGTC	1 cut(s)	753
Psp5II	RGGWCCY	1 cut(s)	368
Psp6I	CCWGG	5 cut(s)	165, 195, 862, 961, 1788
PspGI	CCWGG	5 cut(s)	165, 195, 862, 961, 1788
PspN4I	GGNNCC	5 cut(s)	202, 203, 369, 1737, 1794
PspOMI	GGGCCC	1 cut(s)	201
PspPI	GGNCC	7 cut(s)	201, 202, 368, 655, 718, 729, 1792
PspPPI	RGGWCCY	1 cut(s)	368
PstI	CTGCAG	1 cut(s)	632
PstNI	CAGNNNCTG	1 cut(s)	80
RsaI	GTAC	5 cut(s)	64, 171, 884, 1337, 1497
RsaNI	GTAC	5 cut(s)	63, 170, 883, 1336, 1496
RseI	CAYNNNNRTG	7 cut(s)	152, 606, 647, 891, 1455, 1659, 2286
SatI	GCNGC	7 cut(s)	33, 57, 84, 103, 118, 631, 1392
Sau3AI	GATC	4 cut(s)	6, 1056, 1408, 1559
Sau96I	GGNCC	7 cut(s)	201, 202, 368, 655, 718, 729, 1792
ScaI	AGTACT	1 cut(s)	64
SchI	GAGTC	1 cut(s)	1314
ScrFI	CCNGG	5 cut(s)	167, 197, 864, 963, 1790
SduI	GDGCHC	2 cut(s)	205, 1545
SexAI	ACCWGGT	1 cut(s)	165
SfaNI	GCATC	5 cut(s)	86, 1035, 1892, 1923, 2015
SfcI	CTRYAG	4 cut(s)	190, 298, 628, 837
SinI	GGWCC	3 cut(s)	368, 718, 1792
SmiMI	CAYNNNNRTG	7 cut(s)	152, 606, 647, 891, 1455, 1659, 2286
SmlI	CTYRAG	3 cut(s)	87, 1271, 2029
SmoI	CTYRAG	3 cut(s)	87, 1271, 2029
SpeI	ACTAGT	1 cut(s)	1504
SphI	GCATGC	2 cut(s)	789, 2260
SseBI	AGGCCT	1 cut(s)	2053
SsiI	CCGC	4 cut(s)	32, 56, 117, 1607
SspI	AATATT	2 cut(s)	291, 1678
SspMI	CTAG	7 cut(s)	60, 678, 1064, 1221, 1505, 1859, 2217
StuI	AGGCCT	1 cut(s)	2053
StyD4I	CCNGG	5 cut(s)	165, 195, 862, 961, 1788
StyI	CCWWGG	4 cut(s)	1114, 1309, 1525, 1929
TaaI	ACNGT	8 cut(s)	130, 191, 503, 948, 1333, 1617, 1996, 2271
TaiI	ACGT	1 cut(s)	276
TaqI	TCGA	5 cut(s)	5, 1235, 1382, 1657, 2265
TatI	WGTACW	2 cut(s)	62, 1335
TauI	GCSGC	3 cut(s)	35, 59, 120
TfiI	GAWTC	3 cut(s)	739, 1037, 1948
TseFI	GTSAC	2 cut(s)	419, 983
TseI	GCWGC	4 cut(s)	83, 102, 630, 1391
Tsp45I	GTSAC	2 cut(s)	419, 983
TspGWI	ACGGA	3 cut(s)	957, 1505, 2100
Van91I	CCANNNNNTGG	1 cut(s)	2285
VpaK11BI	GGWCC	3 cut(s)	368, 718, 1792
XapI	RAATTY	3 cut(s)	461, 1119, 1514
XceI	RCATGY	3 cut(s)	481, 789, 2260
XmiI	GTMKAC	1 cut(s)	1509
XmnI	GAANNNNTTC	2 cut(s)	708, 779
XspI	CTAG	7 cut(s)	60, 678, 1064, 1221, 1505, 1859, 2217
ZrmI	AGTACT	1 cut(s)	64

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.