Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0005791

Physical Location & Seq

Genomic Coordinates Reverse (-)

10988095 .. 10991526

Gene Structure 3432 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0124300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGCGGCCTTGGAGGGGATCTTGCTCATCATCCAACTCTCATTTGTAATCACCGGAGTACTGATTGTATCAACAACAGCAGCAGCACCTCAAGCGCTGCCTAACTGCCCTGACAAATGTGGTAATCTCACAGTTCCTTATCCATTTGGCATGGCCGAAGGTTGTTACCGAGGAAATGCCTTCTTTGTCAATTGTAGCCAAGCAACCGATCCCCCAATAGCATATTTGACCAAAAACGGCAATGTCATCATTACCAACATATCCCTTGCTGAGGGTGAGTTGCAAATATCAGACTTTATAGCTCGAGATTGCTATAGCGCCTCTGCTCTAAGAACCAGAAGGAACAGCCCTGTGCTACGGCTGCCTTCTCCTTACACCATCTCTGATACCAAAAACAAATTCATTGCCGTTGGTTGTGACACTTACGCAATTTTCAAAGGATTCAGGGGCACAGAACAGTCCATAACTGGGTGCATGTCAGTATGTAACAGCCTAGAAAGCGTTGATCAGAATTCTTGCTCCGGGGTTGGGTGTTGCCAAACAAACATTCCTAGCGGACTGCATAACCGTACTGTGACACTGGATAGCTATAGCAATCATTCAGGTATATGGGACTTTAACCCTTGCAGCTTTGCATTCATTGTTGAAGAGACACAGTTCAAGTTCTCCGGGAACACAAGTTTTCAACAACTGAACAGCACTACACGGCTTCCAATGGTTCTTAATTGGGCAATTGGGGACGAGCCAGACCCATGTGATGTAGCTAAAAAGAGGCAGGATTTCGTATGCCAGAACTATAGCAAGTGTGTGAATCCCACAAATAGGAATGGTTACATTTGCCAGTGCTTGGATGGTTACGAAGGGAACCCATACCACCCAGATGGTTGCCAAGATATTGATGAGTGCAAGGATCCAAACCTCTGCAACCACGGAGAGTGCAAAAATTTGGCAGGAAGTTACTACTGTTCATGCTCAAAAGGATACAAGATCGACAGCATGAATGACAAGAGTTGCATCAAAGAGAATCCCAAAAATAAATCAAAGATGACTCTCCTGCTTATTATTTCATTGAGTGTAAGTATAGGCTTATTGGTTTTATTTGTGGGGATTTCGTGGATATGTTGCGGGATAAAGAGAAGACAATACACTAAACTCAAAGAAAAGTACTTCAAAGAGAATGGTGGCTTATTGTTACTACAACAACTTGCTAGTCATGGAGGCACTGTGGAGACAACAAAAATCTTTTCCACAGAAGAACTTGAGAAGGCAACAAACAATTACCACGAGAGTAGAATCCTTGGAGAAGGAGGCTATGGAACAGTTTACAAAGGAATACTACCAGATGACAAAGTGGTGGCCATAAAGAAGTCAAAAGGTGGTGCCCCAACCCAAAGTGATCAGTTTGTTAACGAGGTGATTGTTCTTTCTCAAATAAACCACAGAAATGTGGTGAAGCTACTAGGTTGTTGTTTAGAGACAGAAGTGCCTTTACTAGTATATGAGTTCATCACCCATGGAACTCTTTATGAGCATATTCATAAAAAAAGATCATCACTGTCATTTGAATTACGAATGAAGATAGCAGTTGAAACGGCAGAAGCACTGGCATACTTACACTCCTCAACTTCAAATCCAATCATACATCGAGATGTGAAAGCAGAAAATATACTCTTAGATGATGCTTATACAGCAAAAATATCAGACTTTGGAGCTTCAAGATTGATTCCATCAGGTCAAACTGAAATACAAACTTTAGTGCTAGGGACATTCGGTTACCTAGACCCTGAATATCTGCAATCGAACCAACTAACAGAAAAGAGTGACGTCTACAGCTTTGGTGTTGTCCTAGTGGAGCTACTAACAAGCAAAATGGCACTTTCTAAGGACAGATGCTTAACAAGCATCTTTATTTCTTCCATGGATGAAGATTGCTTGAATCAAATTCTTGATGATGACATTGTGAACGAGGGAAACATTGAGACAGCAAAGAATGTGGCCAGTCTTGCAAAAAGATGCTTGAGGGTAAAAGGGGAGGAAAGGCCTACCATGAAAGAAGTAGCAATGGAGCTAGAGGGAATGAGGATTACAGCAAAGCACCCATGGGGAACTAATGTTAGTTTCTGTCCAGAAGAAAATGAGTACTTGCTTGGGTCACTTGATTCAGATGCTTATGTTTTGGATGTTAGAGGAGGTGATGGTAGTTCTAGTGGTTTAACTACTGGTACAGGGTATGACAGCATGCAAATACAAATGTTAATGCCATATGGTGATGGACGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005911 GO:0006081 GO:0006082 GO:0006089 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009438 GO:0009506 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0019172 GO:0019249 GO:0019752 GO:0030054 GO:0031090 GO:0032787 GO:0042180 GO:0042182 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044248 GO:0044249 GO:0044281 GO:0044282 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046185 GO:0046394 GO:0046686 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051596 GO:0055044 GO:0061727 GO:0065007 GO:0071704 GO:0071944 GO:0072330 GO:0080134 GO:0080135 GO:0098588 GO:0098805 GO:1900407 GO:1900409 GO:1901575 GO:1901576 GO:1901615 GO:1901617 GO:1902882 GO:1902884

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DJ-1_PfpI

Protein Analysis

759

Amino Acids

83.49

Weight (kDa)

5.43

Isoelectric Point (pI)

33.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	36 - 98	1.7e-10	Wall-associated receptor kinase galacturonan-binding
EGF_CA	PF07645	298 - 338	1.4e-07	Calcium-binding EGF domain
Pkinase	PF00069	427 - 686	2.6e-51	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	430 - 690	2.5e-51	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005791)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53280 AT1G53280 AT3G14990 AT3G14990 AT3G14990
fragaria_vesca	FvH4_3g18570 FvH4_3g18570 FvH4_3g18570
malus_domestica	MD03G1241000.v1.1 MD11G1260500.v1.1
prunus_persica	Prupe.4G167800_v2.0.a1 Prupe.4G167900_v2.0.a1
pyrus_communis	pycom11g22990
rosa_chinensis	RchiOBHm_Chr5g0031321 RchiOBHm_Chr5g0031331 RchiOBHm_Chr5g0031361 RchiOBHm_Chr5g0031371
rosa_laevigata	RLG00000033301
rosa_multiflora	Rmu_sc0007782.1_g000014 Rmu_sc0018148.1_g000002
rosa_roxburghii	Rroxscaffold_1G00048960
rosa_rugosa	Rorug05G0124300 Rorug05G0124700
rosa_samantha	Rh5AG217400 Rh5BG217100 Rh5CG240700 Rh5DG222400
rosa_wichuraiana	Rw5G019880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1827
AccB1I	GGYRCC	1 cut(s)	1379
AccB7I	CCANNNNNTGG	1 cut(s)	847
AccI	GTMKAC	1 cut(s)	1827
AciI	CCGC	3 cut(s)	5, 555, 1125
AclWI	GGATC	4 cut(s)	26, 203, 905, 918
AcoI	YGGCCR	3 cut(s)	153, 1356, 1995
AcsI	RAATTY	4 cut(s)	398, 511, 943, 1941
AcyI	GRCGYC	1 cut(s)	1824
AfaI	GTAC	5 cut(s)	60, 571, 1166, 2141, 2224
AfeI	AGCGCT	1 cut(s)	96
AfiI	CCNNNNNNNGG	6 cut(s)	15, 271, 468, 528, 822, 847
AhlI	ACTAGT	1 cut(s)	1492
AjuI	GAANNNNNNNTTGG	4 cut(s)	383, 415, 531, 563
AluBI	AGCT	9 cut(s)	302, 588, 630, 764, 1456, 1712, 1833, 1855, 2068
AluI	AGCT	9 cut(s)	302, 588, 630, 764, 1456, 1712, 1833, 1855, 2068
Alw26I	GTCTC	4 cut(s)	644, 1223, 1469, 1973
AlwI	GGATC	4 cut(s)	26, 203, 905, 918
Ama87I	CYCGRG	1 cut(s)	303
Aor51HI	AGCGCT	1 cut(s)	96
AoxI	GGCC	5 cut(s)	6, 153, 1356, 1995, 2039
ApeKI	GCWGC	5 cut(s)	80, 83, 97, 361, 627
ApoI	RAATTY	4 cut(s)	398, 511, 943, 1941
AspLEI	GCGC	2 cut(s)	97, 320
AsuC2I	CCSGG	2 cut(s)	523, 670
AsuHPI	GGTGA	7 cut(s)	43, 287, 1426, 1462, 1501, 2204, 2279
AvaI	CYCGRG	1 cut(s)	303
BaeGI	GKGCMC	2 cut(s)	452, 1384
BalI	TGGCCA	2 cut(s)	1358, 1997
BamHI	GGATCC	1 cut(s)	910
BanI	GGYRCC	1 cut(s)	1379
BarI	GAAGNNNNNNTAC	2 cut(s)	1473, 1505
BauI	CACGAG	1 cut(s)	1283
BbsI	GAAGAC	1 cut(s)	1144
BbvCI	CCTCAGC	1 cut(s)	270
BbvI	GCAGC	5 cut(s)	84, 92, 95, 348, 639
BccI	CCATC	6 cut(s)	386, 845, 875, 1735, 2189, 2264
BceAI	ACGGC	5 cut(s)	253, 374, 392, 722, 1608
BciVI	GTATCC	1 cut(s)	974
BclI	TGATCA	2 cut(s)	505, 1396
BcnI	CCSGG	2 cut(s)	523, 670
BcoDI	GTCTC	4 cut(s)	644, 1223, 1469, 1973
BcuI	ACTAGT	1 cut(s)	1492
BfmI	CTRYAG	4 cut(s)	313, 589, 796, 1828
BfoI	RGCGCY	2 cut(s)	98, 321
BfuI	GTATCC	1 cut(s)	974
BisI	GCNGC	6 cut(s)	6, 81, 84, 98, 362, 628
BlsI	GCNGC	6 cut(s)	7, 82, 85, 99, 363, 629
BmcAI	AGTACT	3 cut(s)	60, 1166, 2141
Bme1390I	CCNGG	2 cut(s)	523, 670
BmeT110I	CYCGRG	1 cut(s)	303
BmiI	GGNNCC	3 cut(s)	866, 912, 1381
BmrFI	CCNGG	2 cut(s)	523, 670
BmrI	ACTGGG	1 cut(s)	477
BmsI	GCATC	6 cut(s)	1023, 1669, 1880, 1911, 2003, 2155
BmuI	ACTGGG	1 cut(s)	477
BpiI	GAAGAC	1 cut(s)	1144
Bpu10I	CCTNAGC	1 cut(s)	270
BpuEI	CTTGAG	3 cut(s)	75, 1280, 2038
BpuMI	CCSGG	2 cut(s)	523, 670
BsaHI	GRCGYC	1 cut(s)	1824
BsaJI	CCNNGG	8 cut(s)	9, 169, 522, 928, 1297, 1513, 1917, 2099
BsaWI	WCCGGW	1 cut(s)	53
BsaXI	ACNNNNNCTCC	4 cut(s)	1209, 1239, 1601, 1631
Bsc4I	CCNNNNNNNGG	6 cut(s)	15, 271, 468, 528, 822, 847
Bse1I	ACTGG	6 cut(s)	472, 585, 841, 1608, 1998, 2224
Bse3DI	GCAATG	3 cut(s)	247, 402, 2067
BseDI	CCNNGG	8 cut(s)	9, 169, 522, 928, 1297, 1513, 1917, 2099
BseGI	GGATG	4 cut(s)	30, 856, 1927, 2185
BseLI	CCNNNNNNNGG	6 cut(s)	15, 271, 468, 528, 822, 847
BseMI	GCAATG	3 cut(s)	247, 402, 2067
BseMII	CTCAG	1 cut(s)	261
BseNI	ACTGG	6 cut(s)	472, 585, 841, 1608, 1998, 2224
BseRI	GAGGAG	2 cut(s)	1609, 2202
BseSI	GKGCMC	2 cut(s)	452, 1384
BseXI	GCAGC	5 cut(s)	84, 92, 95, 348, 639
BshFI	GGCC	5 cut(s)	8, 155, 1358, 1997, 2041
BshNI	GGYRCC	1 cut(s)	1379
BsiHKCI	CYCGRG	1 cut(s)	303
BsiSI	CCGG	3 cut(s)	54, 522, 669
BslFI	GGGAC	3 cut(s)	626, 752, 1777
BslI	CCNNNNNNNGG	6 cut(s)	15, 271, 468, 528, 822, 847
BsmAI	GTCTC	4 cut(s)	644, 1223, 1469, 1973
BsmFI	GGGAC	3 cut(s)	626, 752, 1777
BsmI	GAATGC	1 cut(s)	635
BsnI	GGCC	5 cut(s)	8, 155, 1358, 1997, 2041
BsoBI	CYCGRG	1 cut(s)	303
Bsp1286I	GDGCHC	2 cut(s)	452, 1384
Bsp143I	GATC	7 cut(s)	18, 208, 505, 910, 987, 1396, 1547
Bsp19I	CCATGG	3 cut(s)	1513, 1917, 2099
BspACI	CCGC	3 cut(s)	5, 555, 1125
BspANI	GGCC	5 cut(s)	8, 155, 1358, 1997, 2041
BspCNI	CTCAG	1 cut(s)	262
BspLI	GGNNCC	3 cut(s)	866, 912, 1381
BspPI	GGATC	4 cut(s)	26, 203, 905, 918
BspT107I	GGYRCC	1 cut(s)	1379
BsrDI	GCAATG	3 cut(s)	247, 402, 2067
BsrI	ACTGG	6 cut(s)	472, 585, 841, 1608, 1998, 2224
BssECI	CCNNGG	8 cut(s)	9, 169, 522, 928, 1297, 1513, 1917, 2099
BssMI	GATC	7 cut(s)	18, 208, 505, 910, 987, 1396, 1547
BssNI	GRCGYC	1 cut(s)	1824
BssSI	CACGAG	1 cut(s)	1283
BssT1I	CCWWGG	5 cut(s)	9, 1297, 1513, 1917, 2099
Bst2BI	CACGAG	1 cut(s)	1283
Bst4CI	ACNGT	9 cut(s)	133, 459, 569, 574, 657, 965, 1225, 1321, 1557
Bst6I	CTCTTC	1 cut(s)	642
BstACI	GRCGYC	1 cut(s)	1824
BstC8I	GCNNGC	1 cut(s)	2240
BstDEI	CTNAG	4 cut(s)	270, 329, 1672, 1881
BstDSI	CCRYGG	4 cut(s)	928, 1513, 1917, 2099
BstEII	GGTNACC	1 cut(s)	1772
BstENI	CCTNNNNNAGG	1 cut(s)	269
BstF5I	GGATG	4 cut(s)	30, 856, 1927, 2185
BstH2I	RGCGCY	2 cut(s)	98, 321
BstHHI	GCGC	2 cut(s)	97, 320
BstKTI	GATC	7 cut(s)	21, 211, 508, 913, 990, 1399, 1550
BstMAI	GTCTC	4 cut(s)	644, 1223, 1469, 1973
BstMBI	GATC	7 cut(s)	18, 208, 505, 910, 987, 1396, 1547
BstMWI	GCNNNNNNNGC	6 cut(s)	92, 361, 498, 1688, 1899, 2003
BstNSI	RCATGY	2 cut(s)	478, 2242
BstPI	GGTNACC	1 cut(s)	1772
BstSCI	CCNGG	2 cut(s)	521, 668
BstSFI	CTRYAG	4 cut(s)	313, 589, 796, 1828
BstSLI	GKGCMC	2 cut(s)	452, 1384
BstV1I	GCAGC	5 cut(s)	84, 92, 95, 348, 639
BstV2I	GAAGAC	1 cut(s)	1144
BstX2I	RGATCY	2 cut(s)	18, 910
BstXI	CCANNNNNNTGG	1 cut(s)	881
BstYI	RGATCY	2 cut(s)	18, 910
BsuI	GTATCC	1 cut(s)	974
BsuRI	GGCC	5 cut(s)	8, 155, 1358, 1997, 2041
BtgI	CCRYGG	4 cut(s)	928, 1513, 1917, 2099
BtsCI	GGATG	4 cut(s)	30, 856, 1927, 2185
BtsIMutI	CAGTG	5 cut(s)	578, 848, 1221, 1553, 1601
Cac8I	GCNNGC	1 cut(s)	2240
CfoI	GCGC	2 cut(s)	97, 320
Csp6I	GTAC	5 cut(s)	59, 570, 1165, 2140, 2223
CspCI	CAANNNNNGTGG	2 cut(s)	1974, 2009
CviQI	GTAC	5 cut(s)	59, 570, 1165, 2140, 2223
DdeI	CTNAG	4 cut(s)	270, 329, 1672, 1881
DpnI	GATC	7 cut(s)	20, 210, 507, 912, 989, 1398, 1549
DpnII	GATC	7 cut(s)	18, 208, 505, 910, 987, 1396, 1547
EaeI	YGGCCR	3 cut(s)	153, 1356, 1995
Eam1104I	CTCTTC	1 cut(s)	642
EarI	CTCTTC	1 cut(s)	642
Eco130I	CCWWGG	5 cut(s)	9, 1297, 1513, 1917, 2099
Eco147I	AGGCCT	1 cut(s)	2041
Eco47III	AGCGCT	1 cut(s)	96
Eco88I	CYCGRG	1 cut(s)	303
Eco91I	GGTNACC	1 cut(s)	1772
EcoNI	CCTNNNNNAGG	1 cut(s)	269
EcoO65I	GGTNACC	1 cut(s)	1772
EcoRI	GAATTC	1 cut(s)	511
EcoT14I	CCWWGG	5 cut(s)	9, 1297, 1513, 1917, 2099
ErhI	CCWWGG	5 cut(s)	9, 1297, 1513, 1917, 2099
FaqI	GGGAC	3 cut(s)	626, 752, 1777
FauI	CCCGC	1 cut(s)	1118
FauNDI	CATATG	1 cut(s)	2263
FbaI	TGATCA	2 cut(s)	505, 1396
FblI	GTMKAC	1 cut(s)	1827
Fnu4HI	GCNGC	6 cut(s)	6, 81, 84, 98, 362, 628
FokI	GGATG	4 cut(s)	17, 863, 1934, 2192
Fsp4HI	GCNGC	6 cut(s)	6, 81, 84, 98, 362, 628
GlaI	GCGC	2 cut(s)	96, 319
GluI	GCNGC	6 cut(s)	6, 81, 84, 98, 362, 628
HaeII	RGCGCY	2 cut(s)	98, 321
HaeIII	GGCC	5 cut(s)	8, 155, 1358, 1997, 2041
HapII	CCGG	3 cut(s)	54, 522, 669
HhaI	GCGC	2 cut(s)	97, 320
Hin1I	GRCGYC	1 cut(s)	1824
Hin6I	GCGC	2 cut(s)	95, 318
HinP1I	GCGC	2 cut(s)	95, 318
HincII	GTYRAC	1 cut(s)	1408
HindII	GTYRAC	1 cut(s)	1408
HinfI	GANTC	8 cut(s)	441, 811, 1024, 1048, 1293, 1723, 1936, 2159
HpaI	GTTAAC	1 cut(s)	1408
HpaII	CCGG	3 cut(s)	54, 522, 669
HphI	GGTGA	7 cut(s)	43, 287, 1426, 1462, 1501, 2204, 2279
Hpy166II	GTNNAC	4 cut(s)	1324, 1408, 1828, 1963
Hpy188I	TCNGA	5 cut(s)	292, 385, 510, 1702, 2164
Hpy188III	TCNNGA	5 cut(s)	305, 1646, 1716, 1946, 2126
Hpy8I	GTNNAC	4 cut(s)	1324, 1408, 1828, 1963
HpyAV	CCTTC	7 cut(s)	152, 190, 333, 375, 854, 1258, 1298
HpyCH4III	ACNGT	9 cut(s)	133, 459, 569, 574, 657, 965, 1225, 1321, 1557
HpyCH4IV	ACGT	1 cut(s)	1824
HpyF10VI	GCNNNNNNNGC	6 cut(s)	92, 361, 498, 1688, 1899, 2003
HpyF3I	CTNAG	4 cut(s)	270, 329, 1672, 1881
HpySE526I	ACGT	1 cut(s)	1824
Hsp92I	GRCGYC	1 cut(s)	1824
HspAI	GCGC	2 cut(s)	95, 318
Ksp22I	TGATCA	2 cut(s)	505, 1396
KspAI	GTTAAC	1 cut(s)	1408
Kzo9I	GATC	7 cut(s)	18, 208, 505, 910, 987, 1396, 1547
LmnI	GCTCC	4 cut(s)	524, 1709, 1852, 2065
Lsp1109I	GCAGC	5 cut(s)	84, 92, 95, 348, 639
LweI	GCATC	6 cut(s)	1023, 1669, 1880, 1911, 2003, 2155
MaeII	ACGT	1 cut(s)	1824
MalI	GATC	7 cut(s)	20, 210, 507, 912, 989, 1398, 1549
MboI	GATC	7 cut(s)	18, 208, 505, 910, 987, 1396, 1547
MboII	GAAGA	7 cut(s)	659, 1149, 1265, 1588, 1905, 1937, 2141
MfeI	CAATTG	2 cut(s)	190, 732
MflI	RGATCY	2 cut(s)	18, 910
MhlI	GDGCHC	2 cut(s)	452, 1384
MlsI	TGGCCA	2 cut(s)	1358, 1997
MluNI	TGGCCA	2 cut(s)	1358, 1997
MlyI	GAGTC	1 cut(s)	1042
MmeI	TCCRAC	1 cut(s)	58
Mox20I	TGGCCA	2 cut(s)	1358, 1997
MscI	TGGCCA	2 cut(s)	1358, 1997
MseI	TTAA	6 cut(s)	618, 723, 1407, 1895, 2213, 2255
MslI	CAYNNNNRTG	3 cut(s)	879, 1443, 1647
Msp20I	TGGCCA	2 cut(s)	1358, 1997
MspI	CCGG	3 cut(s)	54, 522, 669
MspR9I	CCNGG	2 cut(s)	523, 670
MunI	CAATTG	2 cut(s)	190, 732
Mva1269I	GAATGC	1 cut(s)	635
MwoI	GCNNNNNNNGC	6 cut(s)	92, 361, 498, 1688, 1899, 2003
NciI	CCSGG	2 cut(s)	523, 670
NcoI	CCATGG	3 cut(s)	1513, 1917, 2099
NdeI	CATATG	1 cut(s)	2263
NdeII	GATC	7 cut(s)	18, 208, 505, 910, 987, 1396, 1547
NlaIV	GGNNCC	3 cut(s)	866, 912, 1381
NmuCI	GTSAC	4 cut(s)	416, 574, 1820, 2151
NspI	RCATGY	2 cut(s)	478, 2242
PaeI	GCATGC	1 cut(s)	2242
PaeR7I	CTCGAG	1 cut(s)	303
PceI	AGGCCT	1 cut(s)	2041
PctI	GAATGC	1 cut(s)	635
PfeI	GAWTC	7 cut(s)	441, 811, 1024, 1293, 1723, 1936, 2159
PflMI	CCANNNNNTGG	1 cut(s)	847
PfoI	TCCNGGA	1 cut(s)	668
PkrI	GCNGC	6 cut(s)	7, 82, 85, 99, 363, 629
PleI	GAGTC	1 cut(s)	1042
PpsI	GAGTC	1 cut(s)	1042
PspEI	GGTNACC	1 cut(s)	1772
PspN4I	GGNNCC	3 cut(s)	866, 912, 1381
PsuI	RGATCY	2 cut(s)	18, 910
RsaI	GTAC	5 cut(s)	60, 571, 1166, 2141, 2224
RsaNI	GTAC	5 cut(s)	59, 570, 1165, 2140, 2223
RseI	CAYNNNNRTG	3 cut(s)	879, 1443, 1647
SaqAI	TTAA	6 cut(s)	618, 723, 1407, 1895, 2213, 2255
SatI	GCNGC	6 cut(s)	6, 81, 84, 98, 362, 628
Sau3AI	GATC	7 cut(s)	18, 208, 505, 910, 987, 1396, 1547
ScaI	AGTACT	3 cut(s)	60, 1166, 2141
SchI	GAGTC	1 cut(s)	1042
ScrFI	CCNGG	2 cut(s)	523, 670
SduI	GDGCHC	2 cut(s)	452, 1384
SfaNI	GCATC	6 cut(s)	1023, 1669, 1880, 1911, 2003, 2155
SfcI	CTRYAG	4 cut(s)	313, 589, 796, 1828
Sfr274I	CTCGAG	1 cut(s)	303
SlaI	CTCGAG	1 cut(s)	303
SmiMI	CAYNNNNRTG	3 cut(s)	879, 1443, 1647
SmlI	CTYRAG	4 cut(s)	90, 303, 1259, 2017
SmoI	CTYRAG	4 cut(s)	90, 303, 1259, 2017
SpeI	ACTAGT	1 cut(s)	1492
SphI	GCATGC	1 cut(s)	2242
SseBI	AGGCCT	1 cut(s)	2041
SsiI	CCGC	3 cut(s)	5, 555, 1125
StuI	AGGCCT	1 cut(s)	2041
StyD4I	CCNGG	2 cut(s)	521, 668
StyI	CCWWGG	5 cut(s)	9, 1297, 1513, 1917, 2099
TaaI	ACNGT	9 cut(s)	133, 459, 569, 574, 657, 965, 1225, 1321, 1557
TaiI	ACGT	1 cut(s)	1827
TaqI	TCGA	4 cut(s)	304, 990, 1645, 1799
TatI	WGTACW	3 cut(s)	58, 1164, 2139
TauI	GCSGC	1 cut(s)	8
TfiI	GAWTC	7 cut(s)	441, 811, 1024, 1293, 1723, 1936, 2159
Tru1I	TTAA	6 cut(s)	618, 723, 1407, 1895, 2213, 2255
Tru9I	TTAA	6 cut(s)	618, 723, 1407, 1895, 2213, 2255
TscAI	CASTG	5 cut(s)	585, 848, 1228, 1560, 1608
TseFI	GTSAC	4 cut(s)	416, 574, 1820, 2151
TseI	GCWGC	5 cut(s)	80, 83, 97, 361, 627
Tsp45I	GTSAC	4 cut(s)	416, 574, 1820, 2151
TspGWI	ACGGA	1 cut(s)	945
TspRI	CASTG	5 cut(s)	585, 848, 1228, 1560, 1608
Van91I	CCANNNNNTGG	1 cut(s)	847
XagI	CCTNNNNNAGG	1 cut(s)	269
XapI	RAATTY	4 cut(s)	398, 511, 943, 1941
XceI	RCATGY	2 cut(s)	478, 2242
XcmI	CCANNNNNNNNNTGG	1 cut(s)	848
XhoI	CTCGAG	1 cut(s)	303
XmiI	GTMKAC	1 cut(s)	1827
ZraI	GACGTC	1 cut(s)	1825
ZrmI	AGTACT	3 cut(s)	60, 1166, 2141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.