Prupe.4G167900_v2.0.a1

Protein DJ-1 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
9755445 .. 9758295
2851 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G167900.1

Sequence Viewer

Length: 1188 bp
ATGGCTTCTGCTTCTCCTGCTAAGAAGGTTTTGGTTCCGATTGCGAATGCCACGGAGCGGATTGAGGCGGTGACCATCATCGACGTTCTGCGTAGAGCTGGAGCAGATGTTACTGTGGCTTCTGTGGAGAAGCAGCTTCGCGTTGAAGCCTGCAATGGCGTGATCATCTCTGATGTTTTGATTTCCGATTGTAGCAAAAGTGACTTCGATCTCATCGCTCTACCCGGAGGTGTTCTAGGTGCTGCCAATCTTAAGAATAATGAGGTTCTGGAAAGCTTGGTGAAGAAGCAGGCCGCAGATGGGAAGCTCTATGCGGCGATCTGTGCTTCACCTGCAATGGCATTTGGAACATGGGGTGTGTTGAAAGAACTGAAAGCAACTGGCCATCCATTATTTATGGAGCAATTAGCATCTAGCGCAATCGCTGTTGAATCAAGAGTGCAGGTGGATGGCAAAGCTGTGACTAGTCGTGGACCGGGTACTGCCATGGAGTTTGCTGTTGCCCTGGTTGAGCAATTGTATGGGAAAGAAAAGGCTGATGAAGTATCTGATTTCCTGGTCATGCGTTCCAACCACGGGGATGAATACATCATAACTGAGCTAAACCCAGTTGAGTGGACTCCCAATGATTCCCCAAAGATTCTTGTACCTATTGCAAACGGCACAGAGGAAATGGAAGCTGTTATGATCATTGATATTCTACGACGAGCCAAAGCAAATGTTGTGGTGGCCTCTGTGGAGGATCAACTAGAAATTCTTGCTTCTTGCAAAGTAAAACTGGAGGCAGATGTGCTCCTTGACGAAGCTGCCAAACTTTCATATGACCTAATTGTTTTGCCTGGTGGACTTAGTAGTGCACCAACATTTGCAAAATCAGAAAAGCTCGTGAATATGTTAAAAAAGCAGAGGGATTCACAGAGACCTTATGGAGCCATATGTGCCTCCCCAGCTCTAGTTTTGGAACCCCATGGCTTACTCAAGGGTAAAAAGGCCACAGCGTTCCCCCCAGTGTCCGACAAGCTGTCGGATACGAGTGAAATCGAGAAAAGGGTAGTGATTGATGGCAACCTCATCACCAGCAAAGGAGCAGGAACTTCCATGGAGTTTGCTCTAGGAATTGTTGAGAAGTTTTTCGGGCGCAAGGAAGCAATAGAGAGTGCGAAGATAATGGTTTTCGTTCATCCTTAG

Protein Analysis

396

Amino Acids

42.13

Weight (kDa)

5.32

Isoelectric Point (pI)

35.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 340, 433
Acc36I ACCTGC 2 cut(s) 340, 433
AccBSI CCGCTC 1 cut(s) 58
AccII CGCG 1 cut(s) 141
AciI CCGC 4 cut(s) 58, 68, 294, 314
AclWI GGATC 1 cut(s) 750
AcoI YGGCCR 1 cut(s) 382
AcsI RAATTY 1 cut(s) 753
AfaI GTAC 2 cut(s) 481, 648
AfiI CCNNNNNNNGG 3 cut(s) 57, 300, 576
AflII CTTAAG 1 cut(s) 251
AgsI TTSAA 3 cut(s) 146, 364, 431
AhdI GACNNNNNGTC 1 cut(s) 1021
AhlI ACTAGT 1 cut(s) 464
AjnI CCWGG 3 cut(s) 504, 555, 838
Alw21I GWGCWC 2 cut(s) 795, 859
Alw26I GTCTC 1 cut(s) 913
Alw44I GTGCAC 1 cut(s) 855
AlwI GGATC 1 cut(s) 750
AoxI GGCC 4 cut(s) 291, 382, 729, 990
ApaLI GTGCAC 1 cut(s) 855
ApeKI GCWGC 3 cut(s) 133, 242, 806
ApoI RAATTY 1 cut(s) 753
Asp700I GAANNNNTTC 1 cut(s) 1130
AspLEI GCGC 2 cut(s) 419, 1140
AspS9I GGNCC 1 cut(s) 473
AsuC2I CCSGG 2 cut(s) 225, 477
AsuHPI GGTGA 4 cut(s) 82, 292, 321, 1066
AvaII GGWCC 1 cut(s) 473
BaeGI GKGCMC 1 cut(s) 859
BalI TGGCCA 1 cut(s) 384
BauI CACGAG 1 cut(s) 884
Bbv12I GWGCWC 2 cut(s) 795, 859
BbvI GCAGC 3 cut(s) 145, 229, 793
BccI CCATC 5 cut(s) 83, 293, 393, 443, 1055
BceAI ACGGC 1 cut(s) 676
BciT130I CCWGG 3 cut(s) 506, 557, 840
BciVI GTATCC 1 cut(s) 1021
BclI TGATCA 2 cut(s) 162, 687
BcnI CCSGG 2 cut(s) 225, 477
BcoDI GTCTC 1 cut(s) 913
BcuI ACTAGT 1 cut(s) 464
BfaI CTAG 6 cut(s) 236, 414, 465, 749, 953, 1112
BfrI CTTAAG 1 cut(s) 251
BfuAI ACCTGC 2 cut(s) 340, 433
BfuI GTATCC 1 cut(s) 1021
BisI GCNGC 5 cut(s) 134, 243, 294, 315, 807
BlsI GCNGC 5 cut(s) 135, 244, 295, 316, 808
Bme1390I CCNGG 5 cut(s) 225, 477, 506, 557, 840
Bme18I GGWCC 1 cut(s) 473
BmeRI GACNNNNNGTC 1 cut(s) 1021
BmgT120I GGNCC 1 cut(s) 473
BmiI GGNNCC 3 cut(s) 36, 931, 963
BmrFI CCNGG 5 cut(s) 225, 477, 506, 557, 840
BmrI ACTGGG 2 cut(s) 602, 1001
BmsI GCATC 1 cut(s) 419
BmuI ACTGGG 2 cut(s) 602, 1001
BpmI CTGGAG 2 cut(s) 120, 800
BpuEI CTTGAG 1 cut(s) 962
BpuMI CCSGG 2 cut(s) 225, 477
BsaI GGTCTC 1 cut(s) 913
BsaJI CCNNGG 6 cut(s) 51, 486, 504, 574, 967, 1098
BsaXI ACNNNNNCTCC 2 cut(s) 93, 123
Bsc4I CCNNNNNNNGG 3 cut(s) 57, 300, 576
Bse1I ACTGG 4 cut(s) 385, 608, 783, 1007
Bse3DI GCAATG 2 cut(s) 160, 342
BseBI CCWGG 3 cut(s) 506, 557, 840
BseDI CCNNGG 6 cut(s) 51, 486, 504, 574, 967, 1098
BseGI GGATG 4 cut(s) 385, 454, 586, 1180
BseLI CCNNNNNNNGG 3 cut(s) 57, 300, 576
BseMI GCAATG 2 cut(s) 160, 342
BseMII CTCAG 1 cut(s) 588
BseNI ACTGG 4 cut(s) 385, 608, 783, 1007
BseSI GKGCMC 1 cut(s) 859
BseXI GCAGC 3 cut(s) 145, 229, 793
BseYI CCCAGC 1 cut(s) 946
BsgI GTGCAG 1 cut(s) 461
Bsh1236I CGCG 1 cut(s) 141
BshFI GGCC 4 cut(s) 293, 384, 731, 992
BsiHKAI GWGCWC 2 cut(s) 795, 859
BsiSI CCGG 2 cut(s) 225, 476
BslI CCNNNNNNNGG 3 cut(s) 57, 300, 576
BsmAI GTCTC 1 cut(s) 913
BsmI GAATGC 1 cut(s) 52
BsnI GGCC 4 cut(s) 293, 384, 731, 992
Bso31I GGTCTC 1 cut(s) 913
Bsp1286I GDGCHC 2 cut(s) 795, 859
Bsp143I GATC 5 cut(s) 162, 208, 318, 687, 742
Bsp19I CCATGG 3 cut(s) 486, 967, 1098
BspACI CCGC 4 cut(s) 58, 68, 294, 314
BspANI GGCC 4 cut(s) 293, 384, 731, 992
BspCNI CTCAG 1 cut(s) 589
BspFNI CGCG 1 cut(s) 141
BspLI GGNNCC 3 cut(s) 36, 931, 963
BspMI ACCTGC 2 cut(s) 340, 433
BspPI GGATC 1 cut(s) 750
BspTI CTTAAG 1 cut(s) 251
BspTNI GGTCTC 1 cut(s) 913
BsrBI CCGCTC 1 cut(s) 58
BsrDI GCAATG 2 cut(s) 160, 342
BsrI ACTGG 4 cut(s) 385, 608, 783, 1007
BssECI CCNNGG 6 cut(s) 51, 486, 504, 574, 967, 1098
BssMI GATC 5 cut(s) 162, 208, 318, 687, 742
BssSI CACGAG 1 cut(s) 884
BssT1I CCWWGG 3 cut(s) 486, 967, 1098
Bst2BI CACGAG 1 cut(s) 884
Bst2UI CCWGG 3 cut(s) 506, 557, 840
Bst4CI ACNGT 1 cut(s) 115
BstAFI CTTAAG 1 cut(s) 251
BstC8I GCNNGC 2 cut(s) 151, 291
BstDEI CTNAG 4 cut(s) 21, 597, 848, 1185
BstDSI CCRYGG 5 cut(s) 51, 486, 574, 967, 1098
BstEII GGTNACC 1 cut(s) 70
BstF5I GGATG 4 cut(s) 385, 454, 586, 1180
BstFNI CGCG 1 cut(s) 141
BstHHI GCGC 2 cut(s) 419, 1140
BstKTI GATC 5 cut(s) 165, 211, 321, 690, 745
BstMAI GTCTC 1 cut(s) 913
BstMBI GATC 5 cut(s) 162, 208, 318, 687, 742
BstMWI GCNNNNNNNGC 6 cut(s) 17, 323, 332, 416, 938, 947
BstNI CCWGG 3 cut(s) 506, 557, 840
BstPI GGTNACC 1 cut(s) 70
BstSCI CCNGG 5 cut(s) 223, 475, 504, 555, 838
BstSLI GKGCMC 1 cut(s) 859
BstUI CGCG 1 cut(s) 141
BstV1I GCAGC 3 cut(s) 145, 229, 793
BstXI CCANNNNNNTGG 1 cut(s) 615
BsuI GTATCC 1 cut(s) 1021
BsuRI GGCC 4 cut(s) 293, 384, 731, 992
BtgI CCRYGG 5 cut(s) 51, 486, 574, 967, 1098
BtgZI GCGATG 1 cut(s) 199
BtsCI GGATG 4 cut(s) 385, 454, 586, 1180
BtsIMutI CAGTG 1 cut(s) 1014
BveI ACCTGC 2 cut(s) 340, 433
Cac8I GCNNGC 2 cut(s) 151, 291
CfoI GCGC 2 cut(s) 419, 1140
Cfr13I GGNCC 1 cut(s) 473
Csp6I GTAC 2 cut(s) 480, 647
CspCI CAANNNNNGTGG 2 cut(s) 705, 740
CviAII CATG 5 cut(s) 351, 487, 562, 968, 1099
CviQI GTAC 2 cut(s) 480, 647
DdeI CTNAG 4 cut(s) 21, 597, 848, 1185
DpnI GATC 5 cut(s) 164, 210, 320, 689, 744
DpnII GATC 5 cut(s) 162, 208, 318, 687, 742
DriI GACNNNNNGTC 1 cut(s) 1021
EaeI YGGCCR 1 cut(s) 382
Eam1105I GACNNNNNGTC 1 cut(s) 1021
Eco130I CCWWGG 3 cut(s) 486, 967, 1098
Eco31I GGTCTC 1 cut(s) 913
Eco47I GGWCC 1 cut(s) 473
Eco91I GGTNACC 1 cut(s) 70
EcoO65I GGTNACC 1 cut(s) 70
EcoRII CCWGG 3 cut(s) 504, 555, 838
EcoT14I CCWWGG 3 cut(s) 486, 967, 1098
ErhI CCWWGG 3 cut(s) 486, 967, 1098
FaeI CATG 5 cut(s) 354, 490, 565, 971, 1102
FatI CATG 5 cut(s) 350, 486, 561, 967, 1098
FauNDI CATATG 2 cut(s) 820, 935
FbaI TGATCA 2 cut(s) 162, 687
Fnu4HI GCNGC 5 cut(s) 134, 243, 294, 315, 807
FokI GGATG 4 cut(s) 372, 461, 593, 1167
Fsp4HI GCNGC 5 cut(s) 134, 243, 294, 315, 807
FspBI CTAG 6 cut(s) 236, 414, 465, 749, 953, 1112
GlaI GCGC 2 cut(s) 418, 1139
GluI GCNGC 5 cut(s) 134, 243, 294, 315, 807
GsaI CCCAGC 1 cut(s) 950
GsuI CTGGAG 2 cut(s) 120, 800
HaeIII GGCC 4 cut(s) 293, 384, 731, 992
HapII CCGG 2 cut(s) 225, 476
HhaI GCGC 2 cut(s) 419, 1140
Hin1II CATG 5 cut(s) 354, 490, 565, 971, 1102
Hin6I GCGC 2 cut(s) 417, 1138
HinP1I GCGC 2 cut(s) 417, 1138
HindIII AAGCTT 1 cut(s) 274
HinfI GANTC 5 cut(s) 431, 619, 629, 640, 911
HpaII CCGG 2 cut(s) 225, 476
HphI GGTGA 4 cut(s) 82, 292, 321, 1066
Hpy166II GTNNAC 4 cut(s) 473, 618, 845, 857
Hpy188I TCNGA 7 cut(s) 39, 172, 187, 550, 877, 1015, 1027
Hpy188III TCNNGA 4 cut(s) 269, 435, 886, 1042
Hpy8I GTNNAC 4 cut(s) 473, 618, 845, 857
Hpy99I CGWCG 2 cut(s) 86, 708
HpyAV CCTTC 1 cut(s) 19
HpyCH4III ACNGT 1 cut(s) 115
HpyCH4IV ACGT 1 cut(s) 84
HpyCH4V TGCA 7 cut(s) 153, 335, 442, 656, 768, 857, 869
HpyF10VI GCNNNNNNNGC 6 cut(s) 17, 323, 332, 416, 938, 947
HpyF3I CTNAG 4 cut(s) 21, 597, 848, 1185
HpySE526I ACGT 1 cut(s) 84
Hsp92II CATG 5 cut(s) 354, 490, 565, 971, 1102
HspAI GCGC 2 cut(s) 417, 1138
Ksp22I TGATCA 2 cut(s) 162, 687
Kzo9I GATC 5 cut(s) 162, 208, 318, 687, 742
LmnI GCTCC 6 cut(s) 55, 101, 400, 798, 929, 1085
Lsp1109I GCAGC 3 cut(s) 145, 229, 793
LweI GCATC 1 cut(s) 419
MaeI CTAG 6 cut(s) 236, 414, 465, 749, 953, 1112
MaeII ACGT 1 cut(s) 84
MaeIII GTNAC 4 cut(s) 70, 109, 200, 460
MalI GATC 5 cut(s) 164, 210, 320, 689, 744
MbiI CCGCTC 1 cut(s) 58
MboI GATC 5 cut(s) 162, 208, 318, 687, 742
MboII GAAGA 2 cut(s) 295, 1174
MfeI CAATTG 1 cut(s) 515
MhlI GDGCHC 2 cut(s) 795, 859
MlsI TGGCCA 1 cut(s) 384
MluCI AATT 5 cut(s) 404, 515, 753, 828, 1116
MluNI TGGCCA 1 cut(s) 384
MlyI GAGTC 1 cut(s) 613
MmeI TCCRAC 3 cut(s) 594, 1005, 1038
Mox20I TGGCCA 1 cut(s) 384
MroXI GAANNNNTTC 1 cut(s) 1130
MscI TGGCCA 1 cut(s) 384
MseI TTAA 2 cut(s) 252, 896
MslI CAYNNNNRTG 1 cut(s) 579
Msp20I TGGCCA 1 cut(s) 384
MspCI CTTAAG 1 cut(s) 251
MspI CCGG 2 cut(s) 225, 476
MspR9I CCNGG 5 cut(s) 225, 477, 506, 557, 840
MunI CAATTG 1 cut(s) 515
Mva1269I GAATGC 1 cut(s) 52
MvaI CCWGG 3 cut(s) 506, 557, 840
MvnI CGCG 1 cut(s) 141
MwoI GCNNNNNNNGC 6 cut(s) 17, 323, 332, 416, 938, 947
NciI CCSGG 2 cut(s) 225, 477
NcoI CCATGG 3 cut(s) 486, 967, 1098
NdeI CATATG 2 cut(s) 820, 935
NdeII GATC 5 cut(s) 162, 208, 318, 687, 742
NlaIII CATG 5 cut(s) 354, 490, 565, 971, 1102
NlaIV GGNNCC 3 cut(s) 36, 931, 963
NmuCI GTSAC 3 cut(s) 70, 200, 460
PaqCI CACCTGC 2 cut(s) 340, 433
PctI GAATGC 1 cut(s) 52
PdmI GAANNNNTTC 1 cut(s) 1130
PfeI GAWTC 4 cut(s) 431, 629, 640, 911
PkrI GCNGC 5 cut(s) 135, 244, 295, 316, 808
PleI GAGTC 1 cut(s) 613
PpsI GAGTC 1 cut(s) 613
Psp6I CCWGG 3 cut(s) 504, 555, 838
PspEI GGTNACC 1 cut(s) 70
PspFI CCCAGC 1 cut(s) 946
PspGI CCWGG 3 cut(s) 504, 555, 838
PspN4I GGNNCC 3 cut(s) 36, 931, 963
PspPI GGNCC 1 cut(s) 473
RsaI GTAC 2 cut(s) 481, 648
RsaNI GTAC 2 cut(s) 480, 647
RseI CAYNNNNRTG 1 cut(s) 579
SaqAI TTAA 2 cut(s) 252, 896
SatI GCNGC 5 cut(s) 134, 243, 294, 315, 807
Sau3AI GATC 5 cut(s) 162, 208, 318, 687, 742
Sau96I GGNCC 1 cut(s) 473
SchI GAGTC 1 cut(s) 613
ScrFI CCNGG 5 cut(s) 225, 477, 506, 557, 840
SduI GDGCHC 2 cut(s) 795, 859
SfaNI GCATC 1 cut(s) 419
SinI GGWCC 1 cut(s) 473
SmiMI CAYNNNNRTG 1 cut(s) 579
SmlI CTYRAG 2 cut(s) 251, 977
SmoI CTYRAG 2 cut(s) 251, 977
SpeI ACTAGT 1 cut(s) 464
Sse9I AATT 5 cut(s) 404, 515, 753, 828, 1116
SsiI CCGC 4 cut(s) 58, 68, 294, 314
SspMI CTAG 6 cut(s) 236, 414, 465, 749, 953, 1112
StyD4I CCNGG 5 cut(s) 223, 475, 504, 555, 838
StyI CCWWGG 3 cut(s) 486, 967, 1098
TaaI ACNGT 1 cut(s) 115
TaiI ACGT 1 cut(s) 87
TaqI TCGA 3 cut(s) 81, 207, 1041
TasI AATT 5 cut(s) 404, 515, 753, 828, 1116
TauI GCSGC 2 cut(s) 296, 317
TfiI GAWTC 4 cut(s) 431, 629, 640, 911
Tru1I TTAA 2 cut(s) 252, 896
Tru9I TTAA 2 cut(s) 252, 896
TscAI CASTG 1 cut(s) 1014
TseFI GTSAC 3 cut(s) 70, 200, 460
TseI GCWGC 3 cut(s) 133, 242, 806
Tsp45I GTSAC 3 cut(s) 70, 200, 460
TspDTI ATGAA 4 cut(s) 555, 597, 807, 1169
TspGWI ACGGA 1 cut(s) 68
TspRI CASTG 1 cut(s) 1014
Vha464I CTTAAG 1 cut(s) 251
VneI GTGCAC 1 cut(s) 855
VpaK11BI GGWCC 1 cut(s) 473
XapI RAATTY 1 cut(s) 753
XmnI GAANNNNTTC 1 cut(s) 1130
XspI CTAG 6 cut(s) 236, 414, 465, 749, 953, 1112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.