Rh5BG217100

Protein DJ-1 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
25081225 .. 25085554
4330 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG217100.1

Sequence Viewer

Length: 1344 bp
ATGGCATTGCCTCGCTCATTTCTGTTGGGCTCGTCTCCCTCTATATTATGTAGCAGACTCCATCATATAACCCCTACAACAATCCTTCTCCCTTCTCTCACTACCAAACCCATTCCTTCACTCTCCTTCTCTCTCTCCTCCACCACCGCCATGGCTTCCGCTTCTCCCGCCAAGAAGGTTCTGGTTCCGATTGCGAATGGCTCGGAGCAGATGGAGGCGGTGATCGCCGTCGATGTTCTGCGCCGAGCCGGAGCTGATGTCACTATGGCTTCTGTGGAGAAGCAGCTGAGGGTTGAGGCGTGTCATGGGGTTAAGATCATCGCTGATGCTTTGATTTCGGACTGTGGCCAGAGCTCCTTTGATCTCATTACTCTACCTGGAGGGATGCCAGGTGCTACCAATCTTAAAAACAGTGAGGTCCTGGAAAGTCTGGTGAAAAAGCAAGCTGCCGATGGGAAGCTCTATGCTGCAATCTGTGCTGCACCTGTAGTGGCACTTGAGTCTTGGGGTGTGCTGAAGGGATTGAAAGCAACTTGCTATCCATCATTAATGGAGCAATTAGCAGCATCTAGTGCAACTGCTGTTGAATCAAGAGTGCAGCTAGATGGCAAAGCTGTGACAAGTCCTGGACCTGGTACTACCATAGAGTGTGCTGTTGCACTTGTTGAGCAATTGTATGGGAAAGAGAAAGCTGATGAAGTTTCTGGTCCCCTGGTGATGCGTTCCAACCATGGGGATGAATATATCATAACTGAGCGAAACCCAATGGAGTGGACTTTCACTGATTCCCCAAAGATTCTTGTACCAATAGCTAATGGTACAGAGGAAATGGAAGCTATAATGATCATTGATATTCTCCGACGAGCCAAAGCAACTGTTGTAGTGGCCTCTGTAGAAGATAAGCTAGACATTATTGCTTCTCGCAAAGTTAAGCTGGAAGCGGATGTGCTCCTGGATGAAGCGGCCAAACTTTCGTATGACCTAATAGTTTTACCTGGTGGACTTGGCGGTGCTCAAGCTTTTGCAAAATCAGAAACACTTGTGAATTTGTTGAAAAAGCAGAGGGAATCAAATAAGCCTTATGGAGCTATATGTGCTTCACCAGCTTTAGTCTTTGAACCCCATGGCTTACTCAAGGGAAAAAAGGCTACTGCTTTCCCAGCAATGTGCGACAAGCTGTCAGATAAGAGTGAAATTGAAAATAGGGTATTGGTTGATGGTAACCTCATCACCAGCAGGGGGCCAGGAACTTCCATGGAGTTTGCTCTAGGAATTGTTGAGAAGTTTTTTGGCCGCGAAAAAGCAATAGAGCTTGCAAAAGTTCTGGTTTTTGTTCATCCATAA

Protein Analysis

447

Amino Acids

47.4

Weight (kDa)

6.16

Isoelectric Point (pI)

42.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DJ-1_PfpI PF01965 58 - 224 9.5e-44 DJ-1/PfpI family
DJ-1_PfpI PF01965 265 - 427 3.4e-42 DJ-1/PfpI family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1296
AciI CCGC 8 cut(s) 147, 159, 168, 218, 941, 962, 1008, 1294
AcoI YGGCCR 3 cut(s) 346, 963, 1291
AcsI RAATTY 1 cut(s) 1045
AcuI CTGAAG 1 cut(s) 536
AfaI GTAC 3 cut(s) 637, 804, 820
AfiI CCNNNNNNNGG 3 cut(s) 632, 732, 1239
AgsI TTSAA 5 cut(s) 526, 587, 1054, 1118, 1199
AhdI GACNNNNNGTC 1 cut(s) 1177
AjnI CCWGG 9 cut(s) 376, 388, 420, 625, 631, 711, 951, 994, 1243
Alw21I GWGCWC 3 cut(s) 356, 951, 1015
Alw26I GTCTC 1 cut(s) 39
AoxI GGCC 5 cut(s) 346, 885, 963, 1241, 1291
ApeKI GCWGC 6 cut(s) 283, 446, 467, 479, 563, 598
ApoI RAATTY 1 cut(s) 1045
AseI ATTAAT 1 cut(s) 548
AspLEI GCGC 1 cut(s) 243
AspS9I GGNCC 4 cut(s) 418, 629, 707, 1241
AsuHPI GGTGA 5 cut(s) 232, 445, 727, 1092, 1222
AvaII GGWCC 3 cut(s) 418, 629, 707
BalI TGGCCA 1 cut(s) 348
BanII GRGCYC 2 cut(s) 32, 356
Bbv12I GWGCWC 3 cut(s) 356, 951, 1015
BbvCI CCTCAGC 1 cut(s) 287
BbvI GCAGC 6 cut(s) 295, 433, 454, 466, 575, 610
BccI CCATC 6 cut(s) 69, 205, 446, 550, 599, 1211
BceAI ACGGC 1 cut(s) 212
BciT130I CCWGG 9 cut(s) 378, 390, 422, 627, 633, 713, 953, 996, 1245
BclI TGATCA 1 cut(s) 843
BcoDI GTCTC 1 cut(s) 39
BfaI CTAG 4 cut(s) 570, 602, 905, 1268
BfmI CTRYAG 2 cut(s) 486, 891
BisI GCNGC 8 cut(s) 284, 447, 468, 480, 564, 599, 963, 1294
BlsI GCNGC 8 cut(s) 285, 448, 469, 481, 565, 600, 964, 1295
Bme1390I CCNGG 9 cut(s) 378, 390, 422, 627, 633, 713, 953, 996, 1245
Bme18I GGWCC 3 cut(s) 418, 629, 707
BmeRI GACNNNNNGTC 1 cut(s) 1177
BmgT120I GGNCC 4 cut(s) 418, 629, 707, 1241
BmiI GGNNCC 3 cut(s) 186, 709, 1242
BmrFI CCNGG 9 cut(s) 378, 390, 422, 627, 633, 713, 953, 996, 1245
BmsI GCATC 4 cut(s) 316, 375, 575, 708
BpmI CTGGAG 1 cut(s) 399
Bpu10I CCTNAGC 1 cut(s) 287
BpuEI CTTGAG 3 cut(s) 518, 999, 1118
BsaJI CCNNGG 5 cut(s) 150, 711, 730, 1123, 1254
BsaXI ACNNNNNCTCC 2 cut(s) 243, 273
Bsc4I CCNNNNNNNGG 3 cut(s) 632, 732, 1239
Bse3DI GCAATG 2 cut(s) 5, 1170
BseBI CCWGG 9 cut(s) 378, 390, 422, 627, 633, 713, 953, 996, 1245
BseDI CCNNGG 5 cut(s) 150, 711, 730, 1123, 1254
BseGI GGATG 5 cut(s) 390, 742, 949, 961, 1336
BseLI CCNNNNNNNGG 3 cut(s) 632, 732, 1239
BseMI GCAATG 2 cut(s) 5, 1170
BseMII CTCAG 2 cut(s) 278, 744
BseRI GAGGAG 1 cut(s) 127
BseXI GCAGC 6 cut(s) 295, 433, 454, 466, 575, 610
BseYI CCCAGC 1 cut(s) 1159
BsgI GTGCAG 2 cut(s) 465, 617
Bsh1236I CGCG 1 cut(s) 1296
BshFI GGCC 5 cut(s) 348, 887, 965, 1243, 1293
BsiHKAI GWGCWC 3 cut(s) 356, 951, 1015
BsiSI CCGG 1 cut(s) 249
BslFI GGGAC 1 cut(s) 693
BslI CCNNNNNNNGG 3 cut(s) 632, 732, 1239
BsmAI GTCTC 1 cut(s) 39
BsmBI CGTCTC 1 cut(s) 39
BsmFI GGGAC 1 cut(s) 693
BsnI GGCC 5 cut(s) 348, 887, 965, 1243, 1293
Bsp1286I GDGCHC 4 cut(s) 32, 356, 951, 1015
Bsp143I GATC 4 cut(s) 222, 315, 361, 843
Bsp19I CCATGG 4 cut(s) 150, 730, 1123, 1254
BspACI CCGC 8 cut(s) 147, 159, 168, 218, 941, 962, 1008, 1294
BspANI GGCC 5 cut(s) 348, 887, 965, 1243, 1293
BspCNI CTCAG 2 cut(s) 279, 745
BspFNI CGCG 1 cut(s) 1296
BspLI GGNNCC 3 cut(s) 186, 709, 1242
BsrDI GCAATG 2 cut(s) 5, 1170
BssECI CCNNGG 5 cut(s) 150, 711, 730, 1123, 1254
BssMI GATC 4 cut(s) 222, 315, 361, 843
BssT1I CCWWGG 4 cut(s) 150, 730, 1123, 1254
Bst2UI CCWGG 9 cut(s) 378, 390, 422, 627, 633, 713, 953, 996, 1245
Bst4CI ACNGT 3 cut(s) 344, 413, 877
BstAPI GCANNNNNTGC 2 cut(s) 476, 572
BstC8I GCNNGC 2 cut(s) 444, 1314
BstDEI CTNAG 2 cut(s) 287, 753
BstDSI CCRYGG 4 cut(s) 150, 730, 1123, 1254
BstEII GGTNACC 1 cut(s) 1220
BstF5I GGATG 5 cut(s) 390, 742, 949, 961, 1336
BstFNI CGCG 1 cut(s) 1296
BstHHI GCGC 1 cut(s) 243
BstKTI GATC 4 cut(s) 225, 318, 364, 846
BstMAI GTCTC 1 cut(s) 39
BstMBI GATC 4 cut(s) 222, 315, 361, 843
BstMWI GCNNNNNNNGC 7 cut(s) 167, 224, 476, 572, 1094, 1103, 1160
BstNI CCWGG 9 cut(s) 378, 390, 422, 627, 633, 713, 953, 996, 1245
BstPI GGTNACC 1 cut(s) 1220
BstSCI CCNGG 9 cut(s) 376, 388, 420, 625, 631, 711, 951, 994, 1243
BstSFI CTRYAG 2 cut(s) 486, 891
BstUI CGCG 1 cut(s) 1296
BstV1I GCAGC 6 cut(s) 295, 433, 454, 466, 575, 610
BstXI CCANNNNNNTGG 2 cut(s) 151, 771
BsuRI GGCC 5 cut(s) 348, 887, 965, 1243, 1293
BtgI CCRYGG 4 cut(s) 150, 730, 1123, 1254
BtgZI GCGATG 1 cut(s) 304
BtsCI GGATG 5 cut(s) 390, 742, 949, 961, 1336
BtsIMutI CAGTG 2 cut(s) 418, 780
Cac8I GCNNGC 2 cut(s) 444, 1314
CfoI GCGC 1 cut(s) 243
Cfr13I GGNCC 4 cut(s) 418, 629, 707, 1241
CsiI ACCWGGT 2 cut(s) 631, 994
Csp6I GTAC 3 cut(s) 636, 803, 819
CviAII CATG 5 cut(s) 151, 305, 731, 1124, 1255
CviQI GTAC 3 cut(s) 636, 803, 819
DdeI CTNAG 2 cut(s) 287, 753
DpnI GATC 4 cut(s) 224, 317, 363, 845
DpnII GATC 4 cut(s) 222, 315, 361, 843
DriI GACNNNNNGTC 1 cut(s) 1177
EaeI YGGCCR 3 cut(s) 346, 963, 1291
Eam1105I GACNNNNNGTC 1 cut(s) 1177
Ecl136II GAGCTC 1 cut(s) 354
Eco130I CCWWGG 4 cut(s) 150, 730, 1123, 1254
Eco24I GRGCYC 2 cut(s) 32, 356
Eco47I GGWCC 3 cut(s) 418, 629, 707
Eco53kI GAGCTC 1 cut(s) 354
Eco57I CTGAAG 1 cut(s) 536
Eco91I GGTNACC 1 cut(s) 1220
EcoICRI GAGCTC 1 cut(s) 354
EcoO109I RGGNCCY 1 cut(s) 418
EcoO65I GGTNACC 1 cut(s) 1220
EcoRII CCWGG 9 cut(s) 376, 388, 420, 625, 631, 711, 951, 994, 1243
EcoT14I CCWWGG 4 cut(s) 150, 730, 1123, 1254
EcoT38I GRGCYC 2 cut(s) 32, 356
ErhI CCWWGG 4 cut(s) 150, 730, 1123, 1254
Esp3I CGTCTC 1 cut(s) 39
FaeI CATG 5 cut(s) 154, 308, 734, 1127, 1258
FaqI GGGAC 1 cut(s) 693
FatI CATG 5 cut(s) 150, 304, 730, 1123, 1254
FauI CCCGC 1 cut(s) 175
FbaI TGATCA 1 cut(s) 843
Fnu4HI GCNGC 8 cut(s) 284, 447, 468, 480, 564, 599, 963, 1294
FokI GGATG 5 cut(s) 397, 749, 956, 968, 1323
FriOI GRGCYC 2 cut(s) 32, 356
Fsp4HI GCNGC 8 cut(s) 284, 447, 468, 480, 564, 599, 963, 1294
FspBI CTAG 4 cut(s) 570, 602, 905, 1268
GlaI GCGC 1 cut(s) 242
GluI GCNGC 8 cut(s) 284, 447, 468, 480, 564, 599, 963, 1294
GsaI CCCAGC 1 cut(s) 1163
GsuI CTGGAG 1 cut(s) 399
HaeIII GGCC 5 cut(s) 348, 887, 965, 1243, 1293
HapII CCGG 1 cut(s) 249
HhaI GCGC 1 cut(s) 243
Hin1II CATG 5 cut(s) 154, 308, 734, 1127, 1258
Hin6I GCGC 1 cut(s) 241
HinP1I GCGC 1 cut(s) 241
HindIII AAGCTT 1 cut(s) 1017
HinfI GANTC 6 cut(s) 57, 500, 587, 785, 796, 1067
HpaII CCGG 1 cut(s) 249
HphI GGTGA 5 cut(s) 232, 445, 727, 1092, 1222
Hpy166II GTNNAC 2 cut(s) 774, 1001
Hpy188I TCNGA 6 cut(s) 189, 205, 340, 860, 1033, 1183
Hpy188III TCNNGA 1 cut(s) 591
Hpy8I GTNNAC 2 cut(s) 774, 1001
Hpy99I CGWCG 2 cut(s) 233, 864
HpyAV CCTTC 6 cut(s) 95, 102, 126, 136, 169, 511
HpyCH4III ACNGT 3 cut(s) 344, 413, 877
HpyCH4V TGCA 7 cut(s) 470, 482, 575, 598, 659, 1025, 1316
HpyF10VI GCNNNNNNNGC 7 cut(s) 167, 224, 476, 572, 1094, 1103, 1160
HpyF3I CTNAG 2 cut(s) 287, 753
Hsp92II CATG 5 cut(s) 154, 308, 734, 1127, 1258
HspAI GCGC 1 cut(s) 241
Ksp22I TGATCA 1 cut(s) 843
Kzo9I GATC 4 cut(s) 222, 315, 361, 843
LmnI GCTCC 6 cut(s) 205, 251, 359, 553, 954, 1085
Lsp1109I GCAGC 6 cut(s) 295, 433, 454, 466, 575, 610
LweI GCATC 4 cut(s) 316, 375, 575, 708
MabI ACCWGGT 2 cut(s) 631, 994
MaeI CTAG 4 cut(s) 570, 602, 905, 1268
MaeIII GTNAC 3 cut(s) 259, 616, 1220
MalI GATC 4 cut(s) 224, 317, 363, 845
MboI GATC 4 cut(s) 222, 315, 361, 843
MboII GAAGA 1 cut(s) 908
MfeI CAATTG 1 cut(s) 671
MhlI GDGCHC 4 cut(s) 32, 356, 951, 1015
MlsI TGGCCA 1 cut(s) 348
MluCI AATT 5 cut(s) 557, 671, 1045, 1194, 1272
MluNI TGGCCA 1 cut(s) 348
MlyI GAGTC 2 cut(s) 51, 509
MmeI TCCRAC 2 cut(s) 750, 883
Mox20I TGGCCA 1 cut(s) 348
MscI TGGCCA 1 cut(s) 348
MseI TTAA 4 cut(s) 312, 405, 548, 930
MslI CAYNNNNRTG 2 cut(s) 149, 735
Msp20I TGGCCA 1 cut(s) 348
MspA1I CMGCKG 1 cut(s) 286
MspI CCGG 1 cut(s) 249
MspR9I CCNGG 9 cut(s) 378, 390, 422, 627, 633, 713, 953, 996, 1245
MunI CAATTG 1 cut(s) 671
MvaI CCWGG 9 cut(s) 378, 390, 422, 627, 633, 713, 953, 996, 1245
MvnI CGCG 1 cut(s) 1296
MwoI GCNNNNNNNGC 7 cut(s) 167, 224, 476, 572, 1094, 1103, 1160
NcoI CCATGG 4 cut(s) 150, 730, 1123, 1254
NdeII GATC 4 cut(s) 222, 315, 361, 843
NlaIII CATG 5 cut(s) 154, 308, 734, 1127, 1258
NlaIV GGNNCC 3 cut(s) 186, 709, 1242
NmeAIII GCCGAG 1 cut(s) 269
NmuCI GTSAC 2 cut(s) 259, 616
PfeI GAWTC 4 cut(s) 587, 785, 796, 1067
PfoI TCCNGGA 3 cut(s) 420, 625, 951
PkrI GCNGC 8 cut(s) 285, 448, 469, 481, 565, 600, 964, 1295
PleI GAGTC 2 cut(s) 51, 508
PpsI GAGTC 2 cut(s) 51, 508
PpuMI RGGWCCY 1 cut(s) 418
PshBI ATTAAT 1 cut(s) 548
Psp124BI GAGCTC 1 cut(s) 356
Psp5II RGGWCCY 1 cut(s) 418
Psp6I CCWGG 9 cut(s) 376, 388, 420, 625, 631, 711, 951, 994, 1243
PspEI GGTNACC 1 cut(s) 1220
PspFI CCCAGC 1 cut(s) 1159
PspGI CCWGG 9 cut(s) 376, 388, 420, 625, 631, 711, 951, 994, 1243
PspN4I GGNNCC 3 cut(s) 186, 709, 1242
PspPI GGNCC 4 cut(s) 418, 629, 707, 1241
PspPPI RGGWCCY 1 cut(s) 418
PvuII CAGCTG 1 cut(s) 286
RsaI GTAC 3 cut(s) 637, 804, 820
RsaNI GTAC 3 cut(s) 636, 803, 819
RseI CAYNNNNRTG 2 cut(s) 149, 735
SacI GAGCTC 1 cut(s) 356
SaqAI TTAA 4 cut(s) 312, 405, 548, 930
SatI GCNGC 8 cut(s) 284, 447, 468, 480, 564, 599, 963, 1294
Sau3AI GATC 4 cut(s) 222, 315, 361, 843
Sau96I GGNCC 4 cut(s) 418, 629, 707, 1241
SchI GAGTC 2 cut(s) 51, 509
ScrFI CCNGG 9 cut(s) 378, 390, 422, 627, 633, 713, 953, 996, 1245
SduI GDGCHC 4 cut(s) 32, 356, 951, 1015
SexAI ACCWGGT 2 cut(s) 631, 994
SfaNI GCATC 4 cut(s) 316, 375, 575, 708
SfcI CTRYAG 2 cut(s) 486, 891
SinI GGWCC 3 cut(s) 418, 629, 707
SmiMI CAYNNNNRTG 2 cut(s) 149, 735
SmlI CTYRAG 3 cut(s) 497, 1014, 1133
SmoI CTYRAG 3 cut(s) 497, 1014, 1133
Sse9I AATT 5 cut(s) 557, 671, 1045, 1194, 1272
SsiI CCGC 8 cut(s) 147, 159, 168, 218, 941, 962, 1008, 1294
SspMI CTAG 4 cut(s) 570, 602, 905, 1268
SstI GAGCTC 1 cut(s) 356
StyD4I CCNGG 9 cut(s) 376, 388, 420, 625, 631, 711, 951, 994, 1243
StyI CCWWGG 4 cut(s) 150, 730, 1123, 1254
TaaI ACNGT 3 cut(s) 344, 413, 877
TaqI TCGA 1 cut(s) 231
TasI AATT 5 cut(s) 557, 671, 1045, 1194, 1272
TauI GCSGC 2 cut(s) 965, 1296
TfiI GAWTC 4 cut(s) 587, 785, 796, 1067
Tru1I TTAA 4 cut(s) 312, 405, 548, 930
Tru9I TTAA 4 cut(s) 312, 405, 548, 930
TscAI CASTG 2 cut(s) 418, 787
TseFI GTSAC 2 cut(s) 259, 616
TseI GCWGC 6 cut(s) 283, 446, 467, 479, 563, 598
Tsp45I GTSAC 2 cut(s) 259, 616
TspDTI ATGAA 4 cut(s) 711, 753, 972, 1325
TspRI CASTG 2 cut(s) 418, 787
VpaK11BI GGWCC 3 cut(s) 418, 629, 707
VspI ATTAAT 1 cut(s) 548
XapI RAATTY 1 cut(s) 1045
XcmI CCANNNNNNNNNTGG 2 cut(s) 148, 178
XspI CTAG 4 cut(s) 570, 602, 905, 1268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.