Prupe.4G167800_v2.0.a1

Protein DJ-1 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
9747594 .. 9751406
3813 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G167800.1

Sequence Viewer

Length: 1329 bp
ATGGCACTGTGTCACTTGACCCCTCCACGCTCATTTCTCTTGGGCTCGTCTCCTTCTTATTATATATCCAAACTCAAATTGAAACCCACTATCCCTTCTCTCAAAAAGCGCTTCTTCTCATTCTCAATCTCAGCAGCAATGGCTTCTGCTTCTCCTGCTAAGAAGGTTTTGGTTCCGATTGCGAATGGCACGGAGCCGATGGAGGCGGTGATCACCATCGACGTTCTGCGTCGAGCTGGAGCCGATGTTACTGTGGCTTCTGTGGAGAAGCAGCTTCGCGTTGAAGCCTGCCATGGCGTTAAGATCATCGCTGATGTTTTGATTTCCAATTGTAGCAAAAGCGTCTTCGATCTAATCACTCTACCCGGAGGCATGCTAGGTGCTGCCAATCTTAAGAATAGTGAGGTTCTGGAAAGCCTGGTGAAGAAGCAGGCTGCAGATGGGAAGCTCTATGCCGCGATCTGTGCTTCACCTGCAGTGGCATTTGGGTCATGGGGTGTGTTGAAGGGACTGAAAGCAACTTGCTATCCATCATTTATGGATCAGTTAGCATCTAGCGCAACTACTGTTGAATCAAGAGTGCAGGTGGATGGCAAAGCTGTGACTAGTCGTGGACCTGGTACTACCATGGAGTTTGCTGTTGTGCTGGTTGAACAATTGTATGGGAAAGAAAAAGCTGATGAAGTGTCTGGGCCACTGGTCATGCGTTCCAACCATGGTGATGAATATATCATAACTGAGCTAAACCCAGTTGGGTGGACTCCCAATGATTCCCCAAAGATTCTCGTACCTATTGCAAATGGCACAGAGGAAATGGAAGCTACTATGATCATTGATGTTCTACGACGAGCCAAAGCAAATGTTGTGGTGGCCTCTGTAGAGGATCAACTAGAAATTGTTGCTTCTCGCAAAGTTAAACTGGAGGCAGATGTGCTCCTTGACGAAGCTGCCAAACTTTCATATGACCTAATTGTTTTGCCTGGTGGACTTGGTGGTGCCCAAGCATTTGCAAAATCAGAAAAGCTCGTGAATTTGTTAAAAAAGCAGAGGGAGTCACAGAGACCTTATGGAGCGATATGTGCCTCCCCAGCTCTAGTTTTGGAACCCCATGGCTTACTCAAGGGCAAAAAGGCCACTGCGTTCCCTGCAATGTGCGACAAGCTGTCAGATAAAAGTGAAATCGAGAACAGGGTAGTGGTTGATGGCAACCTCATCACCAGCAGAGGACCAGGAACTTCCATGGAGTTTGCTCTAGGAATTGTTGAGAAGTTTTTCGGGCGCAAGAAAGCAATAGAGCTTGCTAAGGTAATGCTTTTTGTTCACCCTTAA

Protein Analysis

443

Amino Acids

47.21

Weight (kDa)

8.86

Isoelectric Point (pI)

35.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 481, 574
Acc36I ACCTGC 2 cut(s) 481, 574
AccB1I GGYRCC 1 cut(s) 995
AccII CGCG 2 cut(s) 279, 458
AciI CCGC 2 cut(s) 206, 456
AclWI GGATC 2 cut(s) 549, 891
AcsI RAATTY 1 cut(s) 1030
AfaI GTAC 2 cut(s) 622, 789
AfeI AGCGCT 1 cut(s) 110
AflII CTTAAG 1 cut(s) 392
AgsI TTSAA 5 cut(s) 82, 284, 505, 572, 653
AhdI GACNNNNNGTC 1 cut(s) 1162
AhlI ACTAGT 1 cut(s) 605
AjnI CCWGG 4 cut(s) 417, 616, 979, 1228
Alw21I GWGCWC 1 cut(s) 936
Alw26I GTCTC 2 cut(s) 54, 1054
AlwI GGATC 2 cut(s) 549, 891
Aor51HI AGCGCT 1 cut(s) 110
AoxI GGCC 3 cut(s) 692, 870, 1131
ApeKI GCWGC 5 cut(s) 134, 271, 383, 434, 947
ApoI RAATTY 1 cut(s) 1030
Asp700I GAANNNNTTC 1 cut(s) 1271
AspLEI GCGC 3 cut(s) 111, 560, 1281
AspS9I GGNCC 3 cut(s) 614, 692, 1226
AsuC2I CCSGG 1 cut(s) 366
AsuHPI GGTGA 7 cut(s) 205, 220, 433, 462, 731, 1207, 1313
AvaII GGWCC 2 cut(s) 614, 1226
BaeGI GKGCMC 1 cut(s) 1000
BanI GGYRCC 1 cut(s) 995
BanII GRGCYC 1 cut(s) 47
BauI CACGAG 1 cut(s) 1025
BbsI GAAGAC 1 cut(s) 337
Bbv12I GWGCWC 1 cut(s) 936
BbvI GCAGC 5 cut(s) 146, 283, 370, 421, 934
BccI CCATC 6 cut(s) 193, 224, 434, 538, 584, 1196
BciT130I CCWGG 4 cut(s) 419, 618, 981, 1230
BclI TGATCA 2 cut(s) 210, 828
BcnI CCSGG 1 cut(s) 366
BcoDI GTCTC 2 cut(s) 54, 1054
BcuI ACTAGT 1 cut(s) 605
BfaI CTAG 6 cut(s) 377, 555, 606, 890, 1094, 1253
BfmI CTRYAG 3 cut(s) 435, 474, 876
BfoI RGCGCY 1 cut(s) 112
BfrI CTTAAG 1 cut(s) 392
BfuAI ACCTGC 2 cut(s) 481, 574
BisI GCNGC 6 cut(s) 135, 272, 384, 435, 456, 948
BlsI GCNGC 6 cut(s) 136, 273, 385, 436, 457, 949
Bme1390I CCNGG 5 cut(s) 366, 419, 618, 981, 1230
Bme18I GGWCC 2 cut(s) 614, 1226
BmeRI GACNNNNNGTC 1 cut(s) 1162
BmgT120I GGNCC 3 cut(s) 614, 692, 1226
BmiI GGNNCC 5 cut(s) 174, 195, 241, 997, 1104
BmrFI CCNGG 5 cut(s) 366, 419, 618, 981, 1230
BmrI ACTGGG 1 cut(s) 743
BmsI GCATC 1 cut(s) 560
BmuI ACTGGG 1 cut(s) 743
BpiI GAAGAC 1 cut(s) 337
BpmI CTGGAG 2 cut(s) 258, 941
Bpu10I CCTNAGC 1 cut(s) 1302
BpuEI CTTGAG 1 cut(s) 1103
BpuMI CCSGG 1 cut(s) 366
BsaBI GATNNNNATC 1 cut(s) 215
BsaI GGTCTC 1 cut(s) 1054
BsaJI CCNNGG 5 cut(s) 292, 627, 715, 1108, 1239
BsaXI ACNNNNNCTCC 2 cut(s) 231, 261
Bse1I ACTGG 3 cut(s) 702, 749, 924
Bse3DI GCAATG 2 cut(s) 144, 1155
Bse8I GATNNNNATC 1 cut(s) 215
BseBI CCWGG 4 cut(s) 419, 618, 981, 1230
BseDI CCNNGG 5 cut(s) 292, 627, 715, 1108, 1239
BseGI GGATG 1 cut(s) 595
BseJI GATNNNNATC 1 cut(s) 215
BseMI GCAATG 2 cut(s) 144, 1155
BseMII CTCAG 2 cut(s) 144, 729
BseNI ACTGG 3 cut(s) 702, 749, 924
BseSI GKGCMC 1 cut(s) 1000
BseXI GCAGC 5 cut(s) 146, 283, 370, 421, 934
BseYI CCCAGC 1 cut(s) 1087
BsgI GTGCAG 1 cut(s) 602
Bsh1236I CGCG 2 cut(s) 279, 458
BshFI GGCC 3 cut(s) 694, 872, 1133
BshNI GGYRCC 1 cut(s) 995
BsiHKAI GWGCWC 1 cut(s) 936
BsiSI CCGG 1 cut(s) 366
BslFI GGGAC 1 cut(s) 522
BsmAI GTCTC 2 cut(s) 54, 1054
BsmBI CGTCTC 1 cut(s) 54
BsmFI GGGAC 1 cut(s) 522
BsnI GGCC 3 cut(s) 694, 872, 1133
Bso31I GGTCTC 1 cut(s) 1054
Bsp1286I GDGCHC 3 cut(s) 47, 936, 1000
Bsp143I GATC 7 cut(s) 210, 303, 349, 459, 541, 828, 883
Bsp19I CCATGG 5 cut(s) 292, 627, 715, 1108, 1239
BspACI CCGC 2 cut(s) 206, 456
BspANI GGCC 3 cut(s) 694, 872, 1133
BspCNI CTCAG 2 cut(s) 143, 730
BspFNI CGCG 2 cut(s) 279, 458
BspLI GGNNCC 5 cut(s) 174, 195, 241, 997, 1104
BspMAI CTGCAG 2 cut(s) 439, 478
BspMI ACCTGC 2 cut(s) 481, 574
BspPI GGATC 2 cut(s) 549, 891
BspT107I GGYRCC 1 cut(s) 995
BspTI CTTAAG 1 cut(s) 392
BspTNI GGTCTC 1 cut(s) 1054
BsrDI GCAATG 2 cut(s) 144, 1155
BsrI ACTGG 3 cut(s) 702, 749, 924
BssECI CCNNGG 5 cut(s) 292, 627, 715, 1108, 1239
BssMI GATC 7 cut(s) 210, 303, 349, 459, 541, 828, 883
BssSI CACGAG 1 cut(s) 1025
BssT1I CCWWGG 5 cut(s) 292, 627, 715, 1108, 1239
Bst2BI CACGAG 1 cut(s) 1025
Bst2UI CCWGG 4 cut(s) 419, 618, 981, 1230
Bst4CI ACNGT 3 cut(s) 9, 253, 568
BstAFI CTTAAG 1 cut(s) 392
BstC8I GCNNGC 4 cut(s) 289, 374, 432, 1299
BstDEI CTNAG 4 cut(s) 130, 159, 738, 1302
BstDSI CCRYGG 5 cut(s) 292, 627, 715, 1108, 1239
BstF5I GGATG 1 cut(s) 595
BstFNI CGCG 2 cut(s) 279, 458
BstH2I RGCGCY 1 cut(s) 112
BstHHI GCGC 3 cut(s) 111, 560, 1281
BstKTI GATC 7 cut(s) 213, 306, 352, 462, 544, 831, 886
BstMAI GTCTC 2 cut(s) 54, 1054
BstMBI GATC 7 cut(s) 210, 303, 349, 459, 541, 828, 883
BstMWI GCNNNNNNNGC 8 cut(s) 140, 155, 464, 473, 557, 1079, 1088, 1145
BstNI CCWGG 4 cut(s) 419, 618, 981, 1230
BstNSI RCATGY 1 cut(s) 376
BstSCI CCNGG 5 cut(s) 364, 417, 616, 979, 1228
BstSFI CTRYAG 3 cut(s) 435, 474, 876
BstSLI GKGCMC 1 cut(s) 1000
BstUI CGCG 2 cut(s) 279, 458
BstV1I GCAGC 5 cut(s) 146, 283, 370, 421, 934
BstV2I GAAGAC 1 cut(s) 337
BstXI CCANNNNNNTGG 1 cut(s) 756
BsuRI GGCC 3 cut(s) 694, 872, 1133
BtgI CCRYGG 5 cut(s) 292, 627, 715, 1108, 1239
BtgZI GCGATG 1 cut(s) 292
BtsCI GGATG 1 cut(s) 595
BtsI GCAGTG 2 cut(s) 483, 1134
BtsIMutI CAGTG 4 cut(s) 5, 483, 695, 1134
BveI ACCTGC 2 cut(s) 481, 574
Cac8I GCNNGC 4 cut(s) 289, 374, 432, 1299
CfoI GCGC 3 cut(s) 111, 560, 1281
Cfr13I GGNCC 3 cut(s) 614, 692, 1226
CseI GACGC 2 cut(s) 218, 331
CsiI ACCWGGT 1 cut(s) 616
Csp6I GTAC 2 cut(s) 621, 788
CspCI CAANNNNNGTGG 2 cut(s) 846, 881
CviAII CATG 8 cut(s) 293, 373, 492, 628, 703, 716, 1109, 1240
CviQI GTAC 2 cut(s) 621, 788
DdeI CTNAG 4 cut(s) 130, 159, 738, 1302
DpnI GATC 7 cut(s) 212, 305, 351, 461, 543, 830, 885
DpnII GATC 7 cut(s) 210, 303, 349, 459, 541, 828, 883
DriI GACNNNNNGTC 1 cut(s) 1162
Eam1105I GACNNNNNGTC 1 cut(s) 1162
Eco130I CCWWGG 5 cut(s) 292, 627, 715, 1108, 1239
Eco24I GRGCYC 1 cut(s) 47
Eco31I GGTCTC 1 cut(s) 1054
Eco47I GGWCC 2 cut(s) 614, 1226
Eco47III AGCGCT 1 cut(s) 110
EcoRII CCWGG 4 cut(s) 417, 616, 979, 1228
EcoT14I CCWWGG 5 cut(s) 292, 627, 715, 1108, 1239
EcoT38I GRGCYC 1 cut(s) 47
ErhI CCWWGG 5 cut(s) 292, 627, 715, 1108, 1239
Esp3I CGTCTC 1 cut(s) 54
FaeI CATG 8 cut(s) 296, 376, 495, 631, 706, 719, 1112, 1243
FalI AAGNNNNNCTT 2 cut(s) 98, 130
FaqI GGGAC 1 cut(s) 522
FatI CATG 8 cut(s) 292, 372, 491, 627, 702, 715, 1108, 1239
FauNDI CATATG 1 cut(s) 961
FbaI TGATCA 2 cut(s) 210, 828
Fnu4HI GCNGC 6 cut(s) 135, 272, 384, 435, 456, 948
FokI GGATG 1 cut(s) 602
FriOI GRGCYC 1 cut(s) 47
Fsp4HI GCNGC 6 cut(s) 135, 272, 384, 435, 456, 948
FspBI CTAG 6 cut(s) 377, 555, 606, 890, 1094, 1253
GlaI GCGC 3 cut(s) 110, 559, 1280
GluI GCNGC 6 cut(s) 135, 272, 384, 435, 456, 948
GsaI CCCAGC 1 cut(s) 1091
GsuI CTGGAG 2 cut(s) 258, 941
HaeII RGCGCY 1 cut(s) 112
HaeIII GGCC 3 cut(s) 694, 872, 1133
HapII CCGG 1 cut(s) 366
HgaI GACGC 2 cut(s) 218, 331
HhaI GCGC 3 cut(s) 111, 560, 1281
Hin1II CATG 8 cut(s) 296, 376, 495, 631, 706, 719, 1112, 1243
Hin6I GCGC 3 cut(s) 109, 558, 1279
HinP1I GCGC 3 cut(s) 109, 558, 1279
HinfI GANTC 5 cut(s) 572, 760, 770, 781, 1052
HpaII CCGG 1 cut(s) 366
HphI GGTGA 7 cut(s) 205, 220, 433, 462, 731, 1207, 1313
Hpy166II GTNNAC 4 cut(s) 614, 759, 986, 1321
Hpy188I TCNGA 3 cut(s) 177, 1018, 1168
Hpy188III TCNNGA 4 cut(s) 410, 576, 1027, 1183
Hpy8I GTNNAC 4 cut(s) 614, 759, 986, 1321
Hpy99I CGWCG 3 cut(s) 224, 234, 849
HpyAV CCTTC 4 cut(s) 63, 105, 157, 499
HpyCH4III ACNGT 3 cut(s) 9, 253, 568
HpyCH4IV ACGT 1 cut(s) 222
HpyCH4V TGCA 6 cut(s) 437, 476, 583, 797, 1010, 1148
HpyF10VI GCNNNNNNNGC 8 cut(s) 140, 155, 464, 473, 557, 1079, 1088, 1145
HpyF3I CTNAG 4 cut(s) 130, 159, 738, 1302
HpySE526I ACGT 1 cut(s) 222
Hsp92II CATG 8 cut(s) 296, 376, 495, 631, 706, 719, 1112, 1243
HspAI GCGC 3 cut(s) 109, 558, 1279
Ksp22I TGATCA 2 cut(s) 210, 828
Kzo9I GATC 7 cut(s) 210, 303, 349, 459, 541, 828, 883
LmnI GCTCC 4 cut(s) 193, 239, 939, 1070
Lsp1109I GCAGC 5 cut(s) 146, 283, 370, 421, 934
LweI GCATC 1 cut(s) 560
MabI ACCWGGT 1 cut(s) 616
MaeI CTAG 6 cut(s) 377, 555, 606, 890, 1094, 1253
MaeII ACGT 1 cut(s) 222
MaeIII GTNAC 4 cut(s) 11, 247, 601, 1053
MalI GATC 7 cut(s) 212, 305, 351, 461, 543, 830, 885
MboI GATC 7 cut(s) 210, 303, 349, 459, 541, 828, 883
MboII GAAGA 3 cut(s) 106, 337, 436
MfeI CAATTG 2 cut(s) 328, 656
MhlI GDGCHC 3 cut(s) 47, 936, 1000
MluCI AATT 7 cut(s) 77, 328, 656, 894, 969, 1030, 1257
MlyI GAGTC 2 cut(s) 754, 1061
MmeI TCCRAC 1 cut(s) 735
MroXI GAANNNNTTC 1 cut(s) 1271
MseI TTAA 5 cut(s) 300, 393, 915, 1037, 1327
MslI CAYNNNNRTG 1 cut(s) 720
MspCI CTTAAG 1 cut(s) 392
MspI CCGG 1 cut(s) 366
MspR9I CCNGG 5 cut(s) 366, 419, 618, 981, 1230
MunI CAATTG 2 cut(s) 328, 656
MvaI CCWGG 4 cut(s) 419, 618, 981, 1230
MvnI CGCG 2 cut(s) 279, 458
MwoI GCNNNNNNNGC 8 cut(s) 140, 155, 464, 473, 557, 1079, 1088, 1145
NciI CCSGG 1 cut(s) 366
NcoI CCATGG 5 cut(s) 292, 627, 715, 1108, 1239
NdeI CATATG 1 cut(s) 961
NdeII GATC 7 cut(s) 210, 303, 349, 459, 541, 828, 883
NlaIII CATG 8 cut(s) 296, 376, 495, 631, 706, 719, 1112, 1243
NlaIV GGNNCC 5 cut(s) 174, 195, 241, 997, 1104
NmuCI GTSAC 3 cut(s) 11, 601, 1053
NspI RCATGY 1 cut(s) 376
PaeI GCATGC 1 cut(s) 376
PaqCI CACCTGC 2 cut(s) 481, 574
PdmI GAANNNNTTC 1 cut(s) 1271
PfeI GAWTC 3 cut(s) 572, 770, 781
PkrI GCNGC 6 cut(s) 136, 273, 385, 436, 457, 949
PleI GAGTC 2 cut(s) 754, 1060
PpsI GAGTC 2 cut(s) 754, 1060
Psp6I CCWGG 4 cut(s) 417, 616, 979, 1228
PspFI CCCAGC 1 cut(s) 1087
PspGI CCWGG 4 cut(s) 417, 616, 979, 1228
PspN4I GGNNCC 5 cut(s) 174, 195, 241, 997, 1104
PspPI GGNCC 3 cut(s) 614, 692, 1226
PstI CTGCAG 2 cut(s) 439, 478
RsaI GTAC 2 cut(s) 622, 789
RsaNI GTAC 2 cut(s) 621, 788
RseI CAYNNNNRTG 1 cut(s) 720
SaqAI TTAA 5 cut(s) 300, 393, 915, 1037, 1327
SatI GCNGC 6 cut(s) 135, 272, 384, 435, 456, 948
Sau3AI GATC 7 cut(s) 210, 303, 349, 459, 541, 828, 883
Sau96I GGNCC 3 cut(s) 614, 692, 1226
SchI GAGTC 2 cut(s) 754, 1061
ScrFI CCNGG 5 cut(s) 366, 419, 618, 981, 1230
SduI GDGCHC 3 cut(s) 47, 936, 1000
SexAI ACCWGGT 1 cut(s) 616
SfaNI GCATC 1 cut(s) 560
SfcI CTRYAG 3 cut(s) 435, 474, 876
SinI GGWCC 2 cut(s) 614, 1226
SmiMI CAYNNNNRTG 1 cut(s) 720
SmlI CTYRAG 2 cut(s) 392, 1118
SmoI CTYRAG 2 cut(s) 392, 1118
SpeI ACTAGT 1 cut(s) 605
SphI GCATGC 1 cut(s) 376
Sse9I AATT 7 cut(s) 77, 328, 656, 894, 969, 1030, 1257
SsiI CCGC 2 cut(s) 206, 456
SspMI CTAG 6 cut(s) 377, 555, 606, 890, 1094, 1253
StyD4I CCNGG 5 cut(s) 364, 417, 616, 979, 1228
StyI CCWWGG 5 cut(s) 292, 627, 715, 1108, 1239
TaaI ACNGT 3 cut(s) 9, 253, 568
TaiI ACGT 1 cut(s) 225
TaqI TCGA 4 cut(s) 219, 232, 348, 1182
TasI AATT 7 cut(s) 77, 328, 656, 894, 969, 1030, 1257
TauI GCSGC 1 cut(s) 458
TfiI GAWTC 3 cut(s) 572, 770, 781
Tru1I TTAA 5 cut(s) 300, 393, 915, 1037, 1327
Tru9I TTAA 5 cut(s) 300, 393, 915, 1037, 1327
TscAI CASTG 4 cut(s) 12, 483, 702, 1141
TseFI GTSAC 3 cut(s) 11, 601, 1053
TseI GCWGC 5 cut(s) 134, 271, 383, 434, 947
Tsp45I GTSAC 3 cut(s) 11, 601, 1053
TspDTI ATGAA 3 cut(s) 696, 738, 948
TspGWI ACGGA 1 cut(s) 206
TspRI CASTG 4 cut(s) 12, 483, 702, 1141
Vha464I CTTAAG 1 cut(s) 392
VpaK11BI GGWCC 2 cut(s) 614, 1226
XapI RAATTY 1 cut(s) 1030
XceI RCATGY 1 cut(s) 376
XmnI GAANNNNTTC 1 cut(s) 1271
XspI CTAG 6 cut(s) 377, 555, 606, 890, 1094, 1253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.