Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004780

Physical Location & Seq

Genomic Coordinates Reverse (-)

7821997 .. 7826196

Gene Structure 4200 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G22170.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGGATATAGATCTTCGACTACATTCAGGTGACCTTTGCAAAGGAGATGATGAGGATAGAGGACTTGATAATGTGTTACACAATGAAGAAGATATGGATATTGGCAAAATTGAGGATGTTTCTGTTGAGGTTAATACTGATGACAGTGTAGGCATGGGTGTTCCAACTGGGGAGTTGGTTGAGTACACTGAGGGTATGAATCTTGAACCTCTTAATGGTATGGAGTTTGAGTCACACGGTGAAGCGTATTCGTTTTACCAGGAGTATTCTCGAGCTATGGGGTTTAACACTGCGATACAGAACAGTCGTAGATCGAAAACTACAAGAGAGTTTATTGATGCGAAGTTTGCTTGCTCTAGGTATGGTACTAAAAGAGAATATGACAAATCTTTTAATCGGCCACGAGCTAGACAAAGTAAGCAAGATCCAGAGAATATGGCTGGTAGGAGAACATGTGCGAAAACCGATTGCAAAGCTAGTATGCATGTTAAGAGAAGGCCGGATGGGAAATGGGTAATTCACAGCTTTGTGAGGGAGCATAATCATGAGCTTTTACCTGCACAAGCTGTGAGTGAACAGACCAGAAAGATATATGCTGCAATGGCTAAGCAGTTTGCTGAGTACAAAACTGTTATAAGTCTAAAAAGCGATTCGAAAAGTTCTTTTGAAAAAGGTCGGACTTTATCAGTGGAAACAGGGGATTTCAAAATCCTGCTTGACTTCTTGTCACGGATGCAATCCTTGAATTCCAACTTCTTTTATGCAGTAGATCTGGGCGATGATCAGCGAGTGAAGAATGTATTTTGGGTAGATGCAAAGAGCAGGCATAACTATGGCAGTTTTTGTGATGTTGTTTCTCTAGACACCACCTACGTAAGAAACAAGTACAAGATGCCACTTGCTATTTTTGTTGGAGTGAACCAGCACTACCAGTATATGGTCCTTGGGTGCGCCTTAATATCCGATGAGAGTGCAGCAACATATTCTTGGTTAATGGAGACCTGGCTGAGAGCAATCGGTGGACAAGCTCCAAAGGTTTTGATCACTGAGCTAGACGTTGTAATGAACTCCATTGTTCCCGAAATCTTCCCCAATACACGGCATTGCCTTTTTCTTTGGCATGTATTGATGAAGGTTTCTGAGAATCTTGGTCAAGTTGTTAAGCAACATGATAATTTTATGCCTAAGTTTGAGAAGTGCATCTATAAATCAGGGAAAGATGAAGACTTTGCGAGAAAATGGTATAAGAATCTTGCTAGATTCGGCCTCAAAGATGATCAATGGATGATTTCTTTATATGAAGACCGCAAGAAATGGGCACCAACCTACATGACTGATGTTCTTTTGGCTGGGATGTCTACATCTCAACGAGCTGATAGTATTAATGCTTTCTTCGACAAGTATATGCATAAGAAGACTAGTGTACAAGAATTTGTAAAGGTATATGATACAGTTTTGCAAGATAGATGTGAAGAAGAAGCCAAAGCTGATTCTGAAATGTGGAACAAGCAGCCAGCAATGAAGTCTCCATCGCCATTTGAGAAGAGTGTTTCTGAAGTCTATACTCCTGCAGTTTTCAAAAAGTTCCAGATTGAAGTTTTGGGTGCGATTGCGTGTAGTCCTAGGGAGGAGAACCGAGATGCCACATGTTCTACTTTTAGAGTGCAGGATTTTGAAAACAACCAAGACTTCATGGTAACATGGAACCAAACAAAGGCTGAAGTCTCTTGCATCTGTCGGTTATTTGAGTATAAAGGGTATCTCTGCAGACACACTCTTAATGTTCTTCAGTGTTGTCATCTTTCTTCCATCCCCTCGCAGTACATATTGAAGCGGTGGACAAAAGATGCAAAAAGCCGGCATTTTTCAGGAGAACCTCAGCAGTTGCAGACTAGGCTGCTGCGGTATAACGATTTGTGCGAACGAGCATTAAAGCTGAATGAAGAGGCATCCCTCTCTCAAGAGAGTTACAATATTGCATTCCTTGCTATTGAAGGAGCTATAGGAAACTGTGCTGGTATTAATACTTCCGGCAGAAGTCTTCCAGATGTTGTAACGTCACCAACTCAAGGTCTGATTTCTGTGGAGGAGGACAACCATAGCAGAAGTGCAGGCAAAACCAGCAAGAAAAAGAATCCAACTAAGAAAAGAAAAGTGAACCCAGAGCAGGATGTTATGCCAGTTGCAGCGCCAGAAAGCTTGCAACAGATGGATAAGCTGAGCCCAAGGACGGTTGGCATTGAAAGCTATTATGGAACACAGCAGAGCGTACAAGGAATGGTCCAGCTGAACTTAATGGGGCCAACTCGCGATAATTTCTATGGGAATCAACAAACAATGCAAGGATTGCGACAGTTGAACTCGATAGCACCAAGCTACGACAGTTACTACGGTCCTCAGCAAGGCATCCATGGACAGGGAGTAGATTTCTTCAGGCCTGCCAATTTTTCTTACGACATCCGGGATGATCCTAATGTGAGGACTACGCAGTTGCATGAGGACGCGTCTAGACACTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

839

Amino Acids

96.0

Weight (kDa)

6.6

Isoelectric Point (pI)

52.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	84 - 186	1.1e-25	FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like	PF21056	255 - 367	2.1e-07	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE	PF10551	284 - 377	2.3e-21	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0004780)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22170 AT3G22170
fragaria_vesca	FvH4_6g39513 FvH4_6g39513 FvH4_6g39513 FvH4_6g39513
malus_domestica	MD09G1139500.v1.1 MD17G1129000.v1.1
prunus_persica	Prupe.3G186200_v2.0.a1 Prupe.3G186200_v2.0.a1 Prupe.3G186200_v2.0.a1 Prupe.3G186200_v2.0.a1
pyrus_communis	pycom07g28200 pycom09g06010 pycom09g06020 pycom09g06050 pycom17g12100 pycom17g12110
rosa_chinensis	RchiOBHm_Chr2g0153571
rosa_laevigata	RLG00000020710
rosa_multiflora	Rmu_ssc0000024.1_g000021
rosa_roxburghii	Rroxscaffold_2G00094910
rosa_rugosa	Rorug02G0440200 Rorug02G0440300 Rorug02G0440400 Rorug02G0440500 Rorug02G0440600
rosa_samantha	Rh2BG514100 Rh2CG489200 Rh2DG525800
rosa_wichuraiana	Rw2G041340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	635
Acc36I	ACCTGC	1 cut(s)	565
AccB1I	GGYRCC	1 cut(s)	1318
AccB7I	CCANNNNNTGG	1 cut(s)	937
AccI	GTMKAC	1 cut(s)	1358
AccII	CGCG	2 cut(s)	2310, 2504
AciI	CCGC	3 cut(s)	1306, 1834, 1903
AclWI	GGATC	2 cut(s)	419, 2462
AcoI	YGGCCR	1 cut(s)	398
AcsI	RAATTY	2 cut(s)	745, 1430
AcuI	CTGAAG	4 cut(s)	1575, 1740, 1772, 2416
AdeI	CACNNNGTG	1 cut(s)	239
AfaI	GTAC	7 cut(s)	185, 367, 623, 887, 1425, 1823, 2271
AfiI	CCNNNNNNNGG	9 cut(s)	215, 937, 1098, 1714, 2069, 2167, 2230, 2402, 2416
AflIII	ACRYGT	3 cut(s)	452, 1646, 2502
AhdI	GACNNNNNGTC	1 cut(s)	724
AhlI	ACTAGT	1 cut(s)	1418
AjnI	CCWGG	2 cut(s)	258, 1001
Alw26I	GTCTC	3 cut(s)	992, 1530, 1729
AlwI	GGATC	2 cut(s)	419, 2462
Ama87I	CYCGRG	1 cut(s)	270
AoxI	GGCC	5 cut(s)	398, 497, 1264, 2300, 2435
ApeKI	GCWGC	6 cut(s)	596, 974, 1510, 1897, 1900, 2186
ApoI	RAATTY	2 cut(s)	745, 1430
AseI	ATTAAT	2 cut(s)	1383, 2022
AspA2I	CCTAGG	1 cut(s)	1622
AspLEI	GCGC	2 cut(s)	953, 2191
AspS9I	GGNCC	4 cut(s)	940, 2281, 2300, 2393
AsuC2I	CCSGG	1 cut(s)	2462
AsuHPI	GGTGA	3 cut(s)	41, 251, 2052
AsuII	TTCGAA	1 cut(s)	653
AvaI	CYCGRG	1 cut(s)	270
AvaII	GGWCC	3 cut(s)	940, 2281, 2393
AvrII	CCTAGG	1 cut(s)	1622
BaeGI	GKGCMC	1 cut(s)	1321
BanI	GGYRCC	1 cut(s)	1318
BanII	GRGCYC	1 cut(s)	2225
BarI	GAAGNNNNNNTAC	2 cut(s)	2011, 2043
BauI	CACGAG	1 cut(s)	402
BbsI	GAAGAC	4 cut(s)	1230, 1308, 1421, 2033
BbvCI	CCTCAGC	2 cut(s)	1878, 2397
BbvI	GCAGC	6 cut(s)	583, 986, 1522, 1884, 1887, 2198
BccI	CCATC	4 cut(s)	497, 1537, 1817, 2203
BceAI	ACGGC	1 cut(s)	1115
BcgI	CGANNNNNNTGC	2 cut(s)	953, 987
BciT130I	CCWGG	2 cut(s)	260, 1003
BclI	TGATCA	3 cut(s)	781, 1041, 1276
BcnI	CCSGG	1 cut(s)	2462
BcoDI	GTCTC	3 cut(s)	992, 1530, 1729
BcuI	ACTAGT	1 cut(s)	1418
BfmI	CTRYAG	3 cut(s)	1569, 1765, 2001
BfoI	RGCGCY	1 cut(s)	2192
BfuAI	ACCTGC	1 cut(s)	565
BglII	AGATCT	2 cut(s)	10, 769
BisI	GCNGC	6 cut(s)	597, 975, 1511, 1898, 1901, 2187
BlnI	CCTAGG	1 cut(s)	1622
BlpI	GCTNAGC	2 cut(s)	606, 2219
BlsI	GCNGC	6 cut(s)	598, 976, 1512, 1899, 1902, 2188
Bme1390I	CCNGG	3 cut(s)	260, 1003, 2462
Bme18I	GGWCC	3 cut(s)	940, 2281, 2393
BmeRI	GACNNNNNGTC	1 cut(s)	724
BmeT110I	CYCGRG	1 cut(s)	270
BmgT120I	GGNCC	4 cut(s)	940, 2281, 2300, 2393
BmiI	GGNNCC	3 cut(s)	1320, 1706, 2301
BmrFI	CCNGG	3 cut(s)	260, 1003, 2462
BmrI	ACTGGG	1 cut(s)	177
BmuI	ACTGGG	1 cut(s)	177
BpiI	GAAGAC	4 cut(s)	1230, 1308, 1421, 2033
Bpu10I	CCTNAGC	2 cut(s)	1878, 2397
Bpu1102I	GCTNAGC	2 cut(s)	606, 2219
Bpu14I	TTCGAA	1 cut(s)	653
BpuEI	CTTGAG	2 cut(s)	1944, 2052
BpuMI	CCSGG	1 cut(s)	2462
BsaAI	YACGTR	1 cut(s)	874
BsaBI	GATNNNNATC	1 cut(s)	9
BsaI	GGTCTC	1 cut(s)	992
BsaJI	CCNNGG	4 cut(s)	943, 1622, 2225, 2410
BsaXI	ACNNNNNCTCC	4 cut(s)	215, 245, 439, 469
Bsc4I	CCNNNNNNNGG	9 cut(s)	215, 937, 1098, 1714, 2069, 2167, 2230, 2402, 2416
Bse118I	RCCGGY	1 cut(s)	1857
Bse1I	ACTGG	3 cut(s)	172, 931, 2180
Bse3DI	GCAATG	3 cut(s)	606, 1102, 1524
Bse8I	GATNNNNATC	1 cut(s)	9
BseBI	CCWGG	2 cut(s)	260, 1003
BseDI	CCNNGG	4 cut(s)	943, 1622, 2225, 2410
BseJI	GATNNNNATC	1 cut(s)	9
BseLI	CCNNNNNNNGG	9 cut(s)	215, 937, 1098, 1714, 2069, 2167, 2230, 2402, 2416
BseMI	GCAATG	3 cut(s)	606, 1102, 1524
BseMII	CTCAG	8 cut(s)	180, 609, 998, 1038, 1131, 1892, 2210, 2411
BseNI	ACTGG	3 cut(s)	172, 931, 2180
BseRI	GAGGAG	2 cut(s)	1643, 2102
BseSI	GKGCMC	1 cut(s)	1321
BseXI	GCAGC	6 cut(s)	583, 986, 1522, 1884, 1887, 2198
BseYI	CCCAGC	1 cut(s)	1349
BsgI	GTGCAG	4 cut(s)	543, 993, 1685, 2130
Bsh1236I	CGCG	2 cut(s)	2310, 2504
BshFI	GGCC	5 cut(s)	400, 499, 1266, 2302, 2437
BshNI	GGYRCC	1 cut(s)	1318
BsiHKCI	CYCGRG	1 cut(s)	270
BsiSI	CCGG	4 cut(s)	500, 1858, 2031, 2461
BslI	CCNNNNNNNGG	9 cut(s)	215, 937, 1098, 1714, 2069, 2167, 2230, 2402, 2416
BsmAI	GTCTC	3 cut(s)	992, 1530, 1729
BsmI	GAATGC	1 cut(s)	1979
BsnI	GGCC	5 cut(s)	400, 499, 1266, 2302, 2437
Bso31I	GGTCTC	1 cut(s)	992
BsoBI	CYCGRG	1 cut(s)	270
Bsp119I	TTCGAA	1 cut(s)	653
Bsp1286I	GDGCHC	2 cut(s)	1321, 2225
Bsp1407I	TGTACA	1 cut(s)	1423
Bsp143I	GATC	8 cut(s)	10, 311, 424, 769, 781, 1041, 1276, 2467
Bsp1720I	GCTNAGC	2 cut(s)	606, 2219
Bsp19I	CCATGG	1 cut(s)	2410
Bsp68I	TCGCGA	1 cut(s)	2310
BspACI	CCGC	3 cut(s)	1306, 1834, 1903
BspANI	GGCC	5 cut(s)	400, 499, 1266, 2302, 2437
BspCNI	CTCAG	8 cut(s)	181, 610, 999, 1039, 1132, 1891, 2211, 2410
BspFNI	CGCG	2 cut(s)	2310, 2504
BspHI	TCATGA	1 cut(s)	544
BspLI	GGNNCC	3 cut(s)	1320, 1706, 2301
BspMAI	CTGCAG	2 cut(s)	1573, 1769
BspMI	ACCTGC	1 cut(s)	565
BspPI	GGATC	2 cut(s)	419, 2462
BspT104I	TTCGAA	1 cut(s)	653
BspT107I	GGYRCC	1 cut(s)	1318
BspTNI	GGTCTC	1 cut(s)	992
BsrDI	GCAATG	3 cut(s)	606, 1102, 1524
BsrFI	RCCGGY	1 cut(s)	1857
BsrGI	TGTACA	1 cut(s)	1423
BsrI	ACTGG	3 cut(s)	172, 931, 2180
BssAI	RCCGGY	1 cut(s)	1857
BssECI	CCNNGG	4 cut(s)	943, 1622, 2225, 2410
BssMI	GATC	8 cut(s)	10, 311, 424, 769, 781, 1041, 1276, 2467
BssSI	CACGAG	1 cut(s)	402
BssT1I	CCWWGG	4 cut(s)	943, 1622, 2225, 2410
Bst2BI	CACGAG	1 cut(s)	402
Bst2UI	CCWGG	2 cut(s)	260, 1003
Bst6I	CTCTTC	2 cut(s)	1538, 1938
BstAPI	GCANNNNNTGC	2 cut(s)	1985, 2347
BstAUI	TGTACA	1 cut(s)	1423
BstBAI	YACGTR	1 cut(s)	874
BstBI	TTCGAA	1 cut(s)	653
BstC8I	GCNNGC	7 cut(s)	352, 824, 1515, 1859, 2113, 2201, 2439
BstDSI	CCRYGG	1 cut(s)	2410
BstEII	GGTNACC	1 cut(s)	29
BstENI	CCTNNNNNAGG	1 cut(s)	2400
BstFNI	CGCG	2 cut(s)	2310, 2504
BstH2I	RGCGCY	1 cut(s)	2192
BstHHI	GCGC	2 cut(s)	953, 2191
BstKTI	GATC	8 cut(s)	13, 314, 427, 772, 784, 1044, 1279, 2470
BstMAI	GTCTC	3 cut(s)	992, 1530, 1729
BstMBI	GATC	8 cut(s)	10, 311, 424, 769, 781, 1041, 1276, 2467
BstMWI	GCNNNNNNNGC	7 cut(s)	347, 602, 1894, 1985, 2121, 2244, 2347
BstNI	CCWGG	2 cut(s)	260, 1003
BstNSI	RCATGY	4 cut(s)	456, 488, 1124, 1650
BstPI	GGTNACC	1 cut(s)	29
BstSCI	CCNGG	3 cut(s)	258, 1001, 2460
BstSFI	CTRYAG	3 cut(s)	1569, 1765, 2001
BstSLI	GKGCMC	1 cut(s)	1321
BstSNI	TACGTA	1 cut(s)	874
BstUI	CGCG	2 cut(s)	2310, 2504
BstV1I	GCAGC	6 cut(s)	583, 986, 1522, 1884, 1887, 2198
BstV2I	GAAGAC	4 cut(s)	1230, 1308, 1421, 2033
BstX2I	RGATCY	3 cut(s)	10, 424, 769
BstYI	RGATCY	3 cut(s)	10, 424, 769
BsuRI	GGCC	5 cut(s)	400, 499, 1266, 2302, 2437
BtgI	CCRYGG	1 cut(s)	2410
BtgZI	GCGATG	2 cut(s)	792, 1515
BtsI	GCAGTG	1 cut(s)	288
BtsIMutI	CAGTG	6 cut(s)	151, 186, 288, 693, 1044, 1796
BtuMI	TCGCGA	1 cut(s)	2310
BveI	ACCTGC	1 cut(s)	565
Cac8I	GCNNGC	7 cut(s)	352, 824, 1515, 1859, 2113, 2201, 2439
CciI	TCATGA	1 cut(s)	544
CfoI	GCGC	2 cut(s)	953, 2191
Cfr10I	RCCGGY	1 cut(s)	1857
Cfr13I	GGNCC	4 cut(s)	940, 2281, 2300, 2393
CseI	GACGC	2 cut(s)	2493, 2510
Csp6I	GTAC	7 cut(s)	184, 366, 622, 886, 1424, 1822, 2270
CviQI	GTAC	7 cut(s)	184, 366, 622, 886, 1424, 1822, 2270
DpnI	GATC	8 cut(s)	12, 313, 426, 771, 783, 1043, 1278, 2469
DpnII	GATC	8 cut(s)	10, 311, 424, 769, 781, 1041, 1276, 2467
DraIII	CACNNNGTG	1 cut(s)	239
DriI	GACNNNNNGTC	1 cut(s)	724
EaeI	YGGCCR	1 cut(s)	398
Eam1104I	CTCTTC	2 cut(s)	1538, 1938
Eam1105I	GACNNNNNGTC	1 cut(s)	724
EarI	CTCTTC	2 cut(s)	1538, 1938
Eco105I	TACGTA	1 cut(s)	874
Eco130I	CCWWGG	4 cut(s)	943, 1622, 2225, 2410
Eco147I	AGGCCT	1 cut(s)	2437
Eco24I	GRGCYC	1 cut(s)	2225
Eco31I	GGTCTC	1 cut(s)	992
Eco47I	GGWCC	3 cut(s)	940, 2281, 2393
Eco57I	CTGAAG	4 cut(s)	1575, 1740, 1772, 2416
Eco88I	CYCGRG	1 cut(s)	270
Eco91I	GGTNACC	1 cut(s)	29
EcoNI	CCTNNNNNAGG	1 cut(s)	2400
EcoO65I	GGTNACC	1 cut(s)	29
EcoRI	GAATTC	1 cut(s)	745
EcoRII	CCWGG	2 cut(s)	258, 1001
EcoT14I	CCWWGG	4 cut(s)	943, 1622, 2225, 2410
EcoT22I	ATGCAT	2 cut(s)	486, 1410
EcoT38I	GRGCYC	1 cut(s)	2225
ErhI	CCWWGG	4 cut(s)	943, 1622, 2225, 2410
FbaI	TGATCA	3 cut(s)	781, 1041, 1276
FblI	GTMKAC	1 cut(s)	1358
Fnu4HI	GCNGC	6 cut(s)	597, 975, 1511, 1898, 1901, 2187
FriOI	GRGCYC	1 cut(s)	2225
Fsp4HI	GCNGC	6 cut(s)	597, 975, 1511, 1898, 1901, 2187
GlaI	GCGC	2 cut(s)	952, 2190
GluI	GCNGC	6 cut(s)	597, 975, 1511, 1898, 1901, 2187
GsaI	CCCAGC	1 cut(s)	1353
HaeII	RGCGCY	1 cut(s)	2192
HaeIII	GGCC	5 cut(s)	400, 499, 1266, 2302, 2437
HapII	CCGG	4 cut(s)	500, 1858, 2031, 2461
HgaI	GACGC	2 cut(s)	2493, 2510
HhaI	GCGC	2 cut(s)	953, 2191
Hin6I	GCGC	2 cut(s)	951, 2189
HinP1I	GCGC	2 cut(s)	951, 2189
HindIII	AAGCTT	1 cut(s)	2197
HinfI	GANTC	9 cut(s)	199, 230, 650, 1144, 1249, 1260, 1490, 2134, 2326
HpaII	CCGG	4 cut(s)	500, 1858, 2031, 2461
HphI	GGTGA	3 cut(s)	41, 251, 2052
Hpy166II	GTNNAC	8 cut(s)	186, 575, 919, 1022, 1359, 1424, 1839, 2158
Hpy188I	TCNGA	6 cut(s)	678, 964, 1141, 1495, 1555, 2076
Hpy8I	GTNNAC	8 cut(s)	186, 575, 919, 1022, 1359, 1424, 1839, 2158
HpyAV	CCTTC	3 cut(s)	489, 1126, 1988
HpyCH4IV	ACGT	3 cut(s)	873, 1056, 2057
HpyF10VI	GCNNNNNNNGC	7 cut(s)	347, 602, 1894, 1985, 2121, 2244, 2347
HpySE526I	ACGT	3 cut(s)	873, 1056, 2057
HspAI	GCGC	2 cut(s)	951, 2189
KroI	GCCGGC	1 cut(s)	1857
KroNI	GCCGGC	1 cut(s)	1859
Ksp22I	TGATCA	3 cut(s)	781, 1041, 1276
Kzo9I	GATC	8 cut(s)	10, 311, 424, 769, 781, 1041, 1276, 2467
LmnI	GCTCC	3 cut(s)	535, 1033, 1997
Lsp1109I	GCAGC	6 cut(s)	583, 986, 1522, 1884, 1887, 2198
MaeII	ACGT	3 cut(s)	873, 1056, 2057
MaeIII	GTNAC	9 cut(s)	29, 75, 231, 726, 1696, 1967, 2053, 2058, 2384
MalI	GATC	8 cut(s)	12, 313, 426, 771, 783, 1043, 1278, 2469
MboI	GATC	8 cut(s)	10, 311, 424, 769, 781, 1041, 1276, 2467
MflI	RGATCY	3 cut(s)	10, 424, 769
MhlI	GDGCHC	2 cut(s)	1321, 2225
MluCI	AATT	7 cut(s)	108, 516, 745, 1174, 1430, 2314, 2443
MluI	ACGCGT	1 cut(s)	2502
MlyI	GAGTC	1 cut(s)	239
MmeI	TCCRAC	5 cut(s)	188, 656, 774, 892, 2162
Mph1103I	ATGCAT	2 cut(s)	486, 1410
MroNI	GCCGGC	1 cut(s)	1857
MslI	CAYNNNNRTG	3 cut(s)	27, 543, 831
MspA1I	CMGCKG	1 cut(s)	2287
MspI	CCGG	4 cut(s)	500, 1858, 2031, 2461
MspR9I	CCNGG	3 cut(s)	260, 1003, 2462
Mva1269I	GAATGC	1 cut(s)	1979
MvaI	CCWGG	2 cut(s)	260, 1003
MvnI	CGCG	2 cut(s)	2310, 2504
MwoI	GCNNNNNNNGC	7 cut(s)	347, 602, 1894, 1985, 2121, 2244, 2347
NaeI	GCCGGC	1 cut(s)	1859
NciI	CCSGG	1 cut(s)	2462
NcoI	CCATGG	1 cut(s)	2410
NdeII	GATC	8 cut(s)	10, 311, 424, 769, 781, 1041, 1276, 2467
NgoMIV	GCCGGC	1 cut(s)	1857
NlaIV	GGNNCC	3 cut(s)	1320, 1706, 2301
NmuCI	GTSAC	4 cut(s)	29, 231, 726, 2058
NruI	TCGCGA	1 cut(s)	2310
NsiI	ATGCAT	2 cut(s)	486, 1410
NspI	RCATGY	4 cut(s)	456, 488, 1124, 1650
NspV	TTCGAA	1 cut(s)	653
PaeR7I	CTCGAG	1 cut(s)	270
PagI	TCATGA	1 cut(s)	544
PceI	AGGCCT	1 cut(s)	2437
PciI	ACATGT	2 cut(s)	452, 1646
PcsI	WCGNNNNNNNCGW	1 cut(s)	1917
PctI	GAATGC	1 cut(s)	1979
PdiI	GCCGGC	1 cut(s)	1859
PfeI	GAWTC	8 cut(s)	199, 650, 1144, 1249, 1260, 1490, 2134, 2326
PflMI	CCANNNNNTGG	1 cut(s)	937
PfoI	TCCNGGA	1 cut(s)	2460
PkrI	GCNGC	6 cut(s)	598, 976, 1512, 1899, 1902, 2188
PleI	GAGTC	1 cut(s)	238
PpsI	GAGTC	1 cut(s)	238
Ppu21I	YACGTR	1 cut(s)	874
PscI	ACATGT	2 cut(s)	452, 1646
PshBI	ATTAAT	2 cut(s)	1383, 2022
PsiI	TTATAA	1 cut(s)	635
Psp6I	CCWGG	2 cut(s)	258, 1001
PspEI	GGTNACC	1 cut(s)	29
PspFI	CCCAGC	1 cut(s)	1349
PspGI	CCWGG	2 cut(s)	258, 1001
PspN4I	GGNNCC	3 cut(s)	1320, 1706, 2301
PspPI	GGNCC	4 cut(s)	940, 2281, 2300, 2393
PsrI	GAACNNNNNNTAC	2 cut(s)	911, 943
PstI	CTGCAG	2 cut(s)	1573, 1769
PsuI	RGATCY	3 cut(s)	10, 424, 769
PvuII	CAGCTG	1 cut(s)	2287
RruI	TCGCGA	1 cut(s)	2310
RsaI	GTAC	7 cut(s)	185, 367, 623, 887, 1425, 1823, 2271
RsaNI	GTAC	7 cut(s)	184, 366, 622, 886, 1424, 1822, 2270
RseI	CAYNNNNRTG	3 cut(s)	27, 543, 831
SatI	GCNGC	6 cut(s)	597, 975, 1511, 1898, 1901, 2187
Sau3AI	GATC	8 cut(s)	10, 311, 424, 769, 781, 1041, 1276, 2467
Sau96I	GGNCC	4 cut(s)	940, 2281, 2300, 2393
SchI	GAGTC	1 cut(s)	239
ScrFI	CCNGG	3 cut(s)	260, 1003, 2462
SduI	GDGCHC	2 cut(s)	1321, 2225
SfcI	CTRYAG	3 cut(s)	1569, 1765, 2001
Sfr274I	CTCGAG	1 cut(s)	270
SfuI	TTCGAA	1 cut(s)	653
SinI	GGWCC	3 cut(s)	940, 2281, 2393
SlaI	CTCGAG	1 cut(s)	270
SmiMI	CAYNNNNRTG	3 cut(s)	27, 543, 831
SmlI	CTYRAG	3 cut(s)	270, 1959, 2067
SmoI	CTYRAG	3 cut(s)	270, 1959, 2067
SnaBI	TACGTA	1 cut(s)	874
SpeI	ACTAGT	1 cut(s)	1418
Sse9I	AATT	7 cut(s)	108, 516, 745, 1174, 1430, 2314, 2443
SseBI	AGGCCT	1 cut(s)	2437
SsiI	CCGC	3 cut(s)	1306, 1834, 1903
SspI	AATATT	1 cut(s)	1975
StuI	AGGCCT	1 cut(s)	2437
StyD4I	CCNGG	3 cut(s)	258, 1001, 2460
StyI	CCWWGG	4 cut(s)	943, 1622, 2225, 2410
TaiI	ACGT	3 cut(s)	876, 1059, 2060
TaqI	TCGA	6 cut(s)	16, 271, 314, 653, 1395, 2363
TasI	AATT	7 cut(s)	108, 516, 745, 1174, 1430, 2314, 2443
TatI	WGTACW	5 cut(s)	183, 621, 885, 1423, 1821
TfiI	GAWTC	8 cut(s)	199, 650, 1144, 1249, 1260, 1490, 2134, 2326
TscAI	CASTG	6 cut(s)	151, 193, 295, 693, 1051, 1796
TseFI	GTSAC	4 cut(s)	29, 231, 726, 2058
TseI	GCWGC	6 cut(s)	596, 974, 1510, 1897, 1900, 2186
Tsp45I	GTSAC	4 cut(s)	29, 231, 726, 2058
TspDTI	ATGAA	9 cut(s)	99, 212, 1079, 1145, 1236, 1314, 1535, 1681, 1956
TspGWI	ACGGA	1 cut(s)	745
TspRI	CASTG	6 cut(s)	151, 193, 295, 693, 1051, 1796
Van91I	CCANNNNNTGG	1 cut(s)	937
VpaK11BI	GGWCC	3 cut(s)	940, 2281, 2393
VspI	ATTAAT	2 cut(s)	1383, 2022
XagI	CCTNNNNNAGG	1 cut(s)	2400
XapI	RAATTY	2 cut(s)	745, 1430
XbaI	TCTAGA	2 cut(s)	859, 2507
XceI	RCATGY	4 cut(s)	456, 488, 1124, 1650
XhoI	CTCGAG	1 cut(s)	270
XmaJI	CCTAGG	1 cut(s)	1622
XmiI	GTMKAC	1 cut(s)	1358
Zsp2I	ATGCAT	2 cut(s)	486, 1410

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.