Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004780

Physical Location & Seq

Genomic Coordinates Forward (+)

56475820 .. 56477844

Gene Structure 2025 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0440400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGCAGATTTTCCCAGAAAACCTGAGCATATTATGGAACTTGTGGGAAATCCGTGTTATGGTGCTATCAAGCCTCATGTTACAGGCCATTCTCATGCTGTTCGGCAACTGGAGAAAGTTCTGCACCAGCAAATGGCTCAAGTTACTGTGGCTTGCCTACTTGTCTGCAGATTGGGTTGCAACAGTCTCGCTCAGCATACTCTCCAGTTCCAGCAATTCTAAGGAGAATGGAATCAAATCTGTAGACCCTAACCAGGTTCTCTCGGCATTCTGGGCTCCTTTTCTGCTGCTTCACCTTGGTGGCCAAGACACCATTACCGCATACTCATTGGAAGACAATGAGTTGTGGTGGAGGCACCTATTAGTACTAGTGGTTCAGGTGACTATAGCTTTTTATGTCATTTTAAGAGCTTGGTCTGATCATGCGCTTAACTATCTAGCTATTCCAATCTTTGCCTCCGGGATTATCAAATTTGCGGAACGAACTTGGGTTTTCAGGTCTGCAAGCAGTAAGCACTTCAGAGAGTCTATGTTTGCTGATCCTGACCCTGGGCCGAACTACTCCAAATTCATGGATGAATACCTATCCAAAAAGAATCAAGGATTGGAGGTTAACTTAGGGAGAGTGATTGAAGTTCCCACCGGAGCTGATTATTCCTTCACCCCTACAGCTCACAACATCATTTCAAATGCAGCCAATTTGCGACATGCCCATCATTTCTTCGAGGCTCAGTTTTTCAAGCGACTATTTGCTGATCTCGTACTCGGCATCTCTGAAATTTTTTACAGCCAATCCTTCTTCAAGAACAGATCCTCTGATGAAGCTTTCAGAGTTATTGAGATTGAGCTCGGTTTTATGTATGATTTGTTTTATACCAAGGCAGTTCTTTATAATGCCAAGGGTGCCTTCCTGCGGTTTATCAGTTCAGTCACAGTCATTTCTGTTTCTGTGGCCTTCTTGATCATCATCGACACGCATGATTACAAAAGGGAAAACATGATCATCACGTACATATTGCTGGCCGGAGCTGTCATTTTAGAAGTCTCTGCTGGAATTAAATTACTTTGCTCAGATTGGGCAATGCTATGGCTGAGCAAGTTCTGGGAGGTGGGTTTCTTGTATCCAGTTATTTCACCTCTCTTGTCTTCCTCTGCTCAGAGAAAAAGGTGGTCTAATATGTTTACACGTTACAATTTACTGAGACCTTTTCTTGAGGAGAAGCCTGTGAAGATCCCTTGGAGATCCAAAATGTCCAAGAATTCAGAGGAGGTTCCTGGAGAGTTGAAAGAACTAATATTTCAGCAGCTTTTGAAGAAATCAAAGAGTGCGACGGAATTTGGTGCTTGCAAGGAACTATGTGCTCGTAGGGGTGATTGGGTTCTTATTAATGAGGATCTTCATGAGAAACTTGGCTGGAGCATTGAAGAAGAATTCGATAAGAGCATTCTTCTTTGGCATATTGCGACAGACGTCTGCTATTATGATGATATGAAGAAGTACTCAAACAAGTTCCATGACTCGAATTGTGAAGACAGCAAGATGTTATCAGAGTATATGTTCTATCTCCTAGTCAAGCGTCCCTTTATGCTTCCCAATGGGATTGCAAAAATCAGGTTGAAAGACACATGTGCTGAAGCCAATAAGTTCTTTGAACAAAGAAATTGCACAAGAAACTACGAGCTGGCTTGCGAGAATTTACTTGAGGTGAGCACTGTAATTCGTCCGGCTGAAATAAAAGGAGACAAAAGCAAGTCGGTGCTATTTGATGCATGCAGACTTGCTAAAGCTTTGCAATCGCTGGAAAAGAAGGAAAAATGGGAGAATACAAAGAAGTGGGAGTTAATGAGTCATGTATGGGTGGAAATGCTATGTTATGCAGCCAGTCAATGTCGATGGAATCATCATGGTCAGCAACTCAGGCGAGGTGGAGAGCTGCTCACTCATGTCTGGTTTCTTATGGCACATCTTGGAATAACTGAACAGCGTGAAAAGGGTCATTCTAGAGCTTTGTTTAATGTTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0007623 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048511 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

674

Amino Acids

78.31

Weight (kDa)

8.51

Isoelectric Point (pI)

48.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF4220	PF13968	50 - 401	7.1e-95	Domain of unknown function (DUF4220)
DUF594	PF04578	605 - 658	1.3e-24	Protein of unknown function, DUF594

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004780)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22170 AT3G22170
fragaria_vesca	FvH4_6g39513 FvH4_6g39513 FvH4_6g39513 FvH4_6g39513
malus_domestica	MD09G1139500.v1.1 MD17G1129000.v1.1
prunus_persica	Prupe.3G186200_v2.0.a1 Prupe.3G186200_v2.0.a1 Prupe.3G186200_v2.0.a1 Prupe.3G186200_v2.0.a1
pyrus_communis	pycom07g28200 pycom09g06010 pycom09g06020 pycom09g06050 pycom17g12100 pycom17g12110
rosa_chinensis	RchiOBHm_Chr2g0153571
rosa_laevigata	RLG00000020710
rosa_multiflora	Rmu_ssc0000024.1_g000021
rosa_roxburghii	Rroxscaffold_2G00094910
rosa_rugosa	Rorug02G0440200 Rorug02G0440300 Rorug02G0440400 Rorug02G0440500 Rorug02G0440600
rosa_samantha	Rh2BG514100 Rh2CG489200 Rh2DG525800
rosa_wichuraiana	Rw2G041340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	891
AatII	GACGTC	1 cut(s)	1473
AccB1I	GGYRCC	2 cut(s)	354, 902
AccB7I	CCANNNNNTGG	1 cut(s)	132
AccI	GTMKAC	1 cut(s)	243
AciI	CCGC	3 cut(s)	318, 476, 913
AclWI	GGATC	5 cut(s)	533, 804, 1225, 1236, 1401
AcoI	YGGCCR	2 cut(s)	301, 1020
AcsI	RAATTY	7 cut(s)	470, 566, 777, 1258, 1334, 1430, 1693
AcuI	CTGAAG	2 cut(s)	502, 1653
AcyI	GRCGYC	1 cut(s)	1470
AfaI	GTAC	4 cut(s)	366, 762, 1010, 1499
AfiI	CCNNNNNNNGG	5 cut(s)	58, 132, 253, 548, 912
AflIII	ACRYGT	2 cut(s)	1184, 1625
AgsI	TTSAA	9 cut(s)	632, 687, 739, 802, 1285, 1312, 1424, 1618, 1652
AhlI	ACTAGT	1 cut(s)	367
AjnI	CCWGG	3 cut(s)	252, 547, 1273
AjuI	GAANNNNNNNTTGG	4 cut(s)	587, 619, 890, 922
AleI	CACNNNNGTG	1 cut(s)	297
Alw21I	GWGCWC	3 cut(s)	849, 1363, 1712
Alw26I	GTCTC	4 cut(s)	190, 1048, 1195, 1734
AlwI	GGATC	5 cut(s)	533, 804, 1225, 1236, 1401
AoxI	GGCC	5 cut(s)	84, 301, 551, 951, 1020
ApeKI	GCWGC	5 cut(s)	286, 692, 1303, 1877, 1933
ApoI	RAATTY	7 cut(s)	470, 566, 777, 1258, 1334, 1430, 1693
AseI	ATTAAT	1 cut(s)	1386
AspLEI	GCGC	1 cut(s)	427
AspS9I	GGNCC	1 cut(s)	551
AsuC2I	CCSGG	1 cut(s)	460
AsuHPI	GGTGA	6 cut(s)	284, 391, 652, 1125, 1382, 1717
BalI	TGGCCA	1 cut(s)	303
BanI	GGYRCC	2 cut(s)	354, 902
BanII	GRGCYC	2 cut(s)	277, 849
BbsI	GAAGAC	3 cut(s)	339, 1137, 1536
Bbv12I	GWGCWC	3 cut(s)	849, 1363, 1712
BbvI	GCAGC	5 cut(s)	273, 704, 1315, 1889, 1920
BccI	CCATC	2 cut(s)	720, 1887
BcgI	CGANNNNNNTGC	2 cut(s)	168, 202
BciT130I	CCWGG	3 cut(s)	254, 549, 1275
BciVI	GTATCC	1 cut(s)	1131
BclI	TGATCA	3 cut(s)	418, 960, 999
BcnI	CCSGG	1 cut(s)	460
BcoDI	GTCTC	4 cut(s)	190, 1048, 1195, 1734
BcuI	ACTAGT	1 cut(s)	367
BfaI	CTAG	4 cut(s)	368, 437, 1568, 2001
BfmI	CTRYAG	4 cut(s)	165, 240, 384, 666
BfuI	GTATCC	1 cut(s)	1131
BisI	GCNGC	5 cut(s)	287, 693, 1304, 1878, 1934
BlpI	GCTNAGC	2 cut(s)	191, 1091
BlsI	GCNGC	5 cut(s)	288, 694, 1305, 1879, 1935
BmcAI	AGTACT	2 cut(s)	366, 1499
Bme1390I	CCNGG	4 cut(s)	254, 460, 549, 1275
BmgT120I	GGNCC	1 cut(s)	551
BmiI	GGNNCC	4 cut(s)	276, 356, 904, 1272
BmrFI	CCNGG	4 cut(s)	254, 460, 549, 1275
BmsI	GCATC	2 cut(s)	777, 1756
BoxI	GACNNNNGTC	1 cut(s)	1469
BpiI	GAAGAC	3 cut(s)	339, 1137, 1536
BplI	GAGNNNNNCTC	2 cut(s)	1920, 1952
BpmI	CTGGAG	4 cut(s)	130, 187, 1296, 1435
Bpu10I	CCTNAGC	1 cut(s)	23
Bpu1102I	GCTNAGC	2 cut(s)	191, 1091
BpuEI	CTTGAG	3 cut(s)	122, 1232, 1721
BpuMI	CCSGG	1 cut(s)	460
BsaAI	YACGTR	1 cut(s)	1008
BsaBI	GATNNNNATC	1 cut(s)	965
BsaHI	GRCGYC	1 cut(s)	1470
BsaI	GGTCTC	1 cut(s)	1195
BsaJI	CCNNGG	6 cut(s)	295, 547, 548, 876, 897, 1235
BsaWI	WCCGGW	1 cut(s)	641
Bsc4I	CCNNNNNNNGG	5 cut(s)	58, 132, 253, 548, 912
Bse1I	ACTGG	4 cut(s)	113, 204, 1124, 1881
Bse3DI	GCAATG	1 cut(s)	1086
Bse8I	GATNNNNATC	1 cut(s)	965
BseBI	CCWGG	3 cut(s)	254, 549, 1275
BseDI	CCNNGG	6 cut(s)	295, 547, 548, 876, 897, 1235
BseGI	GGATG	1 cut(s)	580
BseJI	GATNNNNATC	1 cut(s)	965
BseLI	CCNNNNNNNGG	5 cut(s)	58, 132, 253, 548, 912
BseMI	GCAATG	1 cut(s)	1086
BseMII	CTCAG	8 cut(s)	14, 205, 743, 1082, 1083, 1169, 1190, 1930
BseNI	ACTGG	4 cut(s)	113, 204, 1124, 1881
BseRI	GAGGAG	2 cut(s)	1229, 1280
BseXI	GCAGC	5 cut(s)	273, 704, 1315, 1889, 1920
BsgI	GTGCAG	1 cut(s)	106
BshFI	GGCC	5 cut(s)	86, 303, 553, 953, 1022
BshNI	GGYRCC	2 cut(s)	354, 902
BsiHKAI	GWGCWC	3 cut(s)	849, 1363, 1712
BsiSI	CCGG	4 cut(s)	459, 642, 1023, 1724
BslFI	GGGAC	1 cut(s)	1563
BslI	CCNNNNNNNGG	5 cut(s)	58, 132, 253, 548, 912
BsmAI	GTCTC	4 cut(s)	190, 1048, 1195, 1734
BsmFI	GGGAC	1 cut(s)	1563
BsmI	GAATGC	2 cut(s)	266, 1443
BsnI	GGCC	5 cut(s)	86, 303, 553, 953, 1022
Bso31I	GGTCTC	1 cut(s)	1195
Bsp1286I	GDGCHC	4 cut(s)	277, 849, 1363, 1712
Bsp143I	GATC	9 cut(s)	418, 538, 754, 809, 960, 999, 1230, 1241, 1393
Bsp1720I	GCTNAGC	2 cut(s)	191, 1091
BspACI	CCGC	3 cut(s)	318, 476, 913
BspANI	GGCC	5 cut(s)	86, 303, 553, 953, 1022
BspCNI	CTCAG	8 cut(s)	15, 204, 742, 1082, 1083, 1168, 1191, 1929
BspHI	TCATGA	1 cut(s)	1399
BspLI	GGNNCC	4 cut(s)	276, 356, 904, 1272
BspMAI	CTGCAG	1 cut(s)	169
BspPI	GGATC	5 cut(s)	533, 804, 1225, 1236, 1401
BspT107I	GGYRCC	2 cut(s)	354, 902
BspTNI	GGTCTC	1 cut(s)	1195
BsrDI	GCAATG	1 cut(s)	1086
BsrI	ACTGG	4 cut(s)	113, 204, 1124, 1881
BssECI	CCNNGG	6 cut(s)	295, 547, 548, 876, 897, 1235
BssMI	GATC	9 cut(s)	418, 538, 754, 809, 960, 999, 1230, 1241, 1393
BssNI	GRCGYC	1 cut(s)	1470
BssT1I	CCWWGG	4 cut(s)	295, 876, 897, 1235
Bst2UI	CCWGG	3 cut(s)	254, 549, 1275
Bst4CI	ACNGT	4 cut(s)	147, 184, 934, 1714
BstACI	GRCGYC	1 cut(s)	1470
BstBAI	YACGTR	1 cut(s)	1008
BstC8I	GCNNGC	7 cut(s)	153, 505, 1020, 1345, 1683, 1687, 1771
BstF5I	GGATG	1 cut(s)	580
BstHHI	GCGC	1 cut(s)	427
BstKTI	GATC	9 cut(s)	421, 541, 757, 812, 963, 1002, 1233, 1244, 1396
BstMAI	GTCTC	4 cut(s)	190, 1048, 1195, 1734
BstMBI	GATC	9 cut(s)	418, 538, 754, 809, 960, 999, 1230, 1241, 1393
BstMWI	GCNNNNNNNGC	3 cut(s)	272, 902, 1918
BstNI	CCWGG	3 cut(s)	254, 549, 1275
BstNSI	RCATGY	3 cut(s)	710, 1629, 1773
BstPAI	GACNNNNGTC	1 cut(s)	1469
BstSCI	CCNGG	4 cut(s)	252, 458, 547, 1273
BstSFI	CTRYAG	4 cut(s)	165, 240, 384, 666
BstV1I	GCAGC	5 cut(s)	273, 704, 1315, 1889, 1920
BstV2I	GAAGAC	3 cut(s)	339, 1137, 1536
BstX2I	RGATCY	4 cut(s)	809, 1230, 1241, 1393
BstXI	CCANNNNNNTGG	1 cut(s)	571
BstYI	RGATCY	4 cut(s)	809, 1230, 1241, 1393
BsuI	GTATCC	1 cut(s)	1131
BsuRI	GGCC	5 cut(s)	86, 303, 553, 953, 1022
BtsCI	GGATG	1 cut(s)	580
BtsIMutI	CAGTG	1 cut(s)	1710
Cac8I	GCNNGC	7 cut(s)	153, 505, 1020, 1345, 1683, 1687, 1771
CciI	TCATGA	1 cut(s)	1399
CfoI	GCGC	1 cut(s)	427
Cfr13I	GGNCC	1 cut(s)	551
CseI	GACGC	1 cut(s)	1565
CsiI	ACCWGGT	1 cut(s)	252
Csp6I	GTAC	4 cut(s)	365, 761, 1009, 1498
CviQI	GTAC	4 cut(s)	365, 761, 1009, 1498
DpnI	GATC	9 cut(s)	420, 540, 756, 811, 962, 1001, 1232, 1243, 1395
DpnII	GATC	9 cut(s)	418, 538, 754, 809, 960, 999, 1230, 1241, 1393
EaeI	YGGCCR	2 cut(s)	301, 1020
Ecl136II	GAGCTC	1 cut(s)	847
Eco130I	CCWWGG	4 cut(s)	295, 876, 897, 1235
Eco24I	GRGCYC	2 cut(s)	277, 849
Eco31I	GGTCTC	1 cut(s)	1195
Eco53kI	GAGCTC	1 cut(s)	847
Eco57I	CTGAAG	2 cut(s)	502, 1653
EcoICRI	GAGCTC	1 cut(s)	847
EcoRI	GAATTC	2 cut(s)	1258, 1430
EcoRII	CCWGG	3 cut(s)	252, 547, 1273
EcoT14I	CCWWGG	4 cut(s)	295, 876, 897, 1235
EcoT22I	ATGCAT	1 cut(s)	1771
EcoT38I	GRGCYC	2 cut(s)	277, 849
ErhI	CCWWGG	4 cut(s)	295, 876, 897, 1235
FalI	AAGNNNNNCTT	4 cut(s)	890, 922, 1565, 1597
FaqI	GGGAC	1 cut(s)	1563
FbaI	TGATCA	3 cut(s)	418, 960, 999
FblI	GTMKAC	1 cut(s)	243
Fnu4HI	GCNGC	5 cut(s)	287, 693, 1304, 1878, 1934
FokI	GGATG	1 cut(s)	587
FriOI	GRGCYC	2 cut(s)	277, 849
Fsp4HI	GCNGC	5 cut(s)	287, 693, 1304, 1878, 1934
FspBI	CTAG	4 cut(s)	368, 437, 1568, 2001
GlaI	GCGC	1 cut(s)	426
GluI	GCNGC	5 cut(s)	287, 693, 1304, 1878, 1934
GsuI	CTGGAG	4 cut(s)	130, 187, 1296, 1435
HaeIII	GGCC	5 cut(s)	86, 303, 553, 953, 1022
HapII	CCGG	4 cut(s)	459, 642, 1023, 1724
HgaI	GACGC	1 cut(s)	1565
HhaI	GCGC	1 cut(s)	427
Hin1I	GRCGYC	1 cut(s)	1470
Hin6I	GCGC	1 cut(s)	425
HinP1I	GCGC	1 cut(s)	425
HincII	GTYRAC	1 cut(s)	613
HindII	GTYRAC	1 cut(s)	613
HindIII	AAGCTT	2 cut(s)	822, 1785
HinfI	GANTC	6 cut(s)	231, 524, 595, 1517, 1846, 1897
HpaI	GTTAAC	1 cut(s)	613
HpaII	CCGG	4 cut(s)	459, 642, 1023, 1724
HphI	GGTGA	6 cut(s)	284, 391, 652, 1125, 1382, 1717
Hpy166II	GTNNAC	3 cut(s)	244, 613, 1182
Hpy188I	TCNGA	9 cut(s)	418, 521, 775, 817, 830, 1072, 1158, 1264, 1549
Hpy188III	TCNNGA	6 cut(s)	542, 802, 958, 1211, 1400, 2001
Hpy8I	GTNNAC	3 cut(s)	244, 613, 1182
Hpy99I	CGWCG	1 cut(s)	1333
HpyAV	CCTTC	5 cut(s)	667, 805, 916, 964, 1801
HpyCH4III	ACNGT	4 cut(s)	147, 184, 934, 1714
HpyCH4IV	ACGT	3 cut(s)	1007, 1186, 1470
HpyF10VI	GCNNNNNNNGC	3 cut(s)	272, 902, 1918
HpySE526I	ACGT	3 cut(s)	1007, 1186, 1470
Hsp92I	GRCGYC	1 cut(s)	1470
HspAI	GCGC	1 cut(s)	425
Ksp22I	TGATCA	3 cut(s)	418, 960, 999
KspAI	GTTAAC	1 cut(s)	613
Kzo9I	GATC	9 cut(s)	418, 538, 754, 809, 960, 999, 1230, 1241, 1393
LmnI	GCTCC	4 cut(s)	280, 644, 1025, 1416
Lsp1109I	GCAGC	5 cut(s)	273, 704, 1315, 1889, 1920
LweI	GCATC	2 cut(s)	777, 1756
MabI	ACCWGGT	1 cut(s)	252
MaeI	CTAG	4 cut(s)	368, 437, 1568, 2001
MaeII	ACGT	3 cut(s)	1007, 1186, 1470
MaeIII	GTNAC	5 cut(s)	78, 141, 379, 928, 1187
MalI	GATC	9 cut(s)	420, 540, 756, 811, 962, 1001, 1232, 1243, 1395
MboI	GATC	9 cut(s)	418, 538, 754, 809, 960, 999, 1230, 1241, 1393
MflI	RGATCY	4 cut(s)	809, 1230, 1241, 1393
MhlI	GDGCHC	4 cut(s)	277, 849, 1363, 1712
MlsI	TGGCCA	1 cut(s)	303
MluNI	TGGCCA	1 cut(s)	303
MlyI	GAGTC	3 cut(s)	533, 1511, 1855
Mox20I	TGGCCA	1 cut(s)	303
Mph1103I	ATGCAT	1 cut(s)	1771
MscI	TGGCCA	1 cut(s)	303
MseI	TTAA	7 cut(s)	404, 429, 612, 1056, 1386, 1841, 2013
MslI	CAYNNNNRTG	2 cut(s)	92, 297
Msp20I	TGGCCA	1 cut(s)	303
MspI	CCGG	4 cut(s)	459, 642, 1023, 1724
MspR9I	CCNGG	4 cut(s)	254, 460, 549, 1275
Mva1269I	GAATGC	2 cut(s)	266, 1443
MvaI	CCWGG	3 cut(s)	254, 549, 1275
MwoI	GCNNNNNNNGC	3 cut(s)	272, 902, 1918
NciI	CCSGG	1 cut(s)	460
NdeII	GATC	9 cut(s)	418, 538, 754, 809, 960, 999, 1230, 1241, 1393
NlaIV	GGNNCC	4 cut(s)	276, 356, 904, 1272
NmeAIII	GCCGAG	2 cut(s)	242, 744
NmuCI	GTSAC	2 cut(s)	379, 928
NsiI	ATGCAT	1 cut(s)	1771
NspI	RCATGY	3 cut(s)	710, 1629, 1773
OliI	CACNNNNGTG	1 cut(s)	297
PaeI	GCATGC	1 cut(s)	1773
PagI	TCATGA	1 cut(s)	1399
PasI	CCCWGGG	1 cut(s)	548
PciI	ACATGT	1 cut(s)	1625
PctI	GAATGC	2 cut(s)	266, 1443
PfeI	GAWTC	3 cut(s)	231, 595, 1897
PflMI	CCANNNNNTGG	1 cut(s)	132
PfoI	TCCNGGA	2 cut(s)	458, 1273
PkrI	GCNGC	5 cut(s)	288, 694, 1305, 1879, 1935
PleI	GAGTC	3 cut(s)	532, 1511, 1854
PpsI	GAGTC	3 cut(s)	532, 1511, 1854
Ppu21I	YACGTR	1 cut(s)	1008
PscI	ACATGT	1 cut(s)	1625
PshAI	GACNNNNGTC	1 cut(s)	1469
PshBI	ATTAAT	1 cut(s)	1386
PsiI	TTATAA	1 cut(s)	891
Psp124BI	GAGCTC	1 cut(s)	849
Psp6I	CCWGG	3 cut(s)	252, 547, 1273
PspGI	CCWGG	3 cut(s)	252, 547, 1273
PspN4I	GGNNCC	4 cut(s)	276, 356, 904, 1272
PspPI	GGNCC	1 cut(s)	551
PsrI	GAACNNNNNNTAC	2 cut(s)	357, 389
PstI	CTGCAG	1 cut(s)	169
PsuI	RGATCY	4 cut(s)	809, 1230, 1241, 1393
RsaI	GTAC	4 cut(s)	366, 762, 1010, 1499
RsaNI	GTAC	4 cut(s)	365, 761, 1009, 1498
RseI	CAYNNNNRTG	2 cut(s)	92, 297
SacI	GAGCTC	1 cut(s)	849
SaqAI	TTAA	7 cut(s)	404, 429, 612, 1056, 1386, 1841, 2013
SatI	GCNGC	5 cut(s)	287, 693, 1304, 1878, 1934
Sau3AI	GATC	9 cut(s)	418, 538, 754, 809, 960, 999, 1230, 1241, 1393
Sau96I	GGNCC	1 cut(s)	551
ScaI	AGTACT	2 cut(s)	366, 1499
SchI	GAGTC	3 cut(s)	533, 1511, 1855
ScrFI	CCNGG	4 cut(s)	254, 460, 549, 1275
SduI	GDGCHC	4 cut(s)	277, 849, 1363, 1712
SexAI	ACCWGGT	1 cut(s)	252
SfaNI	GCATC	2 cut(s)	777, 1756
SfcI	CTRYAG	4 cut(s)	165, 240, 384, 666
SmiMI	CAYNNNNRTG	2 cut(s)	92, 297
SmlI	CTYRAG	3 cut(s)	137, 1211, 1700
SmoI	CTYRAG	3 cut(s)	137, 1211, 1700
SpeI	ACTAGT	1 cut(s)	367
SphI	GCATGC	1 cut(s)	1773
SsiI	CCGC	3 cut(s)	318, 476, 913
SspI	AATATT	1 cut(s)	1296
SspMI	CTAG	4 cut(s)	368, 437, 1568, 2001
SstI	GAGCTC	1 cut(s)	849
StyD4I	CCNGG	4 cut(s)	252, 458, 547, 1273
StyI	CCWWGG	4 cut(s)	295, 876, 897, 1235
TaaI	ACNGT	4 cut(s)	147, 184, 934, 1714
TaiI	ACGT	3 cut(s)	1010, 1189, 1473
TaqI	TCGA	5 cut(s)	723, 969, 1434, 1520, 1891
TatI	WGTACW	2 cut(s)	364, 1497
TfiI	GAWTC	3 cut(s)	231, 595, 1897
Tru1I	TTAA	7 cut(s)	404, 429, 612, 1056, 1386, 1841, 2013
Tru9I	TTAA	7 cut(s)	404, 429, 612, 1056, 1386, 1841, 2013
TscAI	CASTG	1 cut(s)	1717
TseFI	GTSAC	2 cut(s)	379, 928
TseI	GCWGC	5 cut(s)	286, 692, 1303, 1877, 1933
Tsp45I	GTSAC	2 cut(s)	379, 928
TspDTI	ATGAA	5 cut(s)	559, 591, 834, 1388, 1505
TspGWI	ACGGA	2 cut(s)	41, 1346
TspRI	CASTG	1 cut(s)	1717
Van91I	CCANNNNNTGG	1 cut(s)	132
VspI	ATTAAT	1 cut(s)	1386
XapI	RAATTY	7 cut(s)	470, 566, 777, 1258, 1334, 1430, 1693
XbaI	TCTAGA	1 cut(s)	2000
XceI	RCATGY	3 cut(s)	710, 1629, 1773
XmiI	GTMKAC	1 cut(s)	243
XspI	CTAG	4 cut(s)	368, 437, 1568, 2001
ZraI	GACGTC	1 cut(s)	1471
ZrmI	AGTACT	2 cut(s)	366, 1499
Zsp2I	ATGCAT	1 cut(s)	1771

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.