Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003148

Physical Location & Seq

Genomic Coordinates Reverse (-)

9308744 .. 9313599

Gene Structure 4856 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G25610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3609 bp

ATGGCTGGTCCAAGTCGGAGAAGAAGAAGATTACATCTAAGCAAGATCTATTCCTACACTTGTGGTAAATCAAGTTTCCAAGAAGATCACTCTAATATAGGAGGACCCGGTTTCTCTCGTGTCGTTTATTGTAACGAACCGGGTTCTCCGGCAGCTGAACGTCGGAACTACGCCGGAAATTACGTCCGGTCAACAAAATACACCGTTGCTTCTTTCTTCCCTAAATCTCTCTTCGAGCAGTTCCGTCGTGTCGCTAACTTTTACTTTCTTGTCACCGGAATCTTATCGTTGACTGATCTCTCTCCTTATGGAGCCGTTAGTGCTCTCTTGCCTCTTGCTCTCGTCATCTCCGCCACAATGGTTAAAGAAGGTATCGAAGATTGGCGCCGGAAACAACAGGATATTGAGGTGAATAACAGAAAAGTGAAAGTACACGACGGAAATGGAATATTCCGGCAAGAAGAATGGAGGAATCTAAGAGTAGGAGACATAGTAAGAGTTGAAAAGGACGAGTTTTTTCCGGCGGATCTTTTGCTATTGTCATCAAGCTACGAAGATTCGGTTTGTTATGTAGAGACGATGAATCTCGACGGTGAGACGAATCTGAAAGTCAAACAAGGACTTGAAGCAACTTCTTCATTGTTAAATCAAGATTCTGATTTTAAAGATTTTAGAGGCGTTGTTAGATGTGAAGATCCAAATGTGAATCTTTATGTGTTCGTTGGAACTTTGGCTCTTGAAGAAGAGAGATTTCCATTGTCGATTCAACAGATTCTTCTCCGTGATTCTAAGCTTAGAAACACAGAGTATGTGTACGGAGCTGTCGTTTTCACCGGACATGACACAAAGGTGATACAGAATTCAACTGATCCACCATCAAAGAGAAGTAGGATCGAGAGGACAATGGACAAGATCATCTACTTAATGTTTGGTCTTGTCTTTCTAATGTCATTCGTTGGATCAATCATCTTTGGAGTTGAAACAAGAGAGGATAAAGTCAAGAACGGAAGAACAGAGAGATGGTATTTGAAACCAGATGATGCAGATATCTTCTTTGATCCAGAAAGAGCTCCAATGGCTGCAATATACCACTTCTTCACTGCTACAATGCTGTATAGTTACTTCATCCCGATTTCGCTTTACGTTTCGATTGAGATCGTTAAAGTTCTTCAGAGCATTTTCATCAATAGAGACATTCATATGTACTATGAAGAAACGGATAAACCCGCGCAGGCACGGACTTCAAATTTGAATGAAGAACTCGGTATGGTTGATACGATTCTATCCGATAAAACGGGGACTTTAACGTGCAATTCAATGGAGTTTATCAAGTGTTCTATCGCGGGTAAGGCTTATGGACGCGGTATAACTGAAGTTGAAAGAGCTATGGCTGTGAGAAGCGGTGGTTCGCCTTTGGTTAATGAAGATTTGGATGTTGTTGTGGATCAGTCTGGTCCTAAGGTTAAAGGGTTTAACTTTGAGGATGAAAGGGTTATGAATGGGAATTGGGTGAGGCAGCCTGAGGCTGCCGTGTTGCAGAAGTTTTTCAGATTGCTTGCTGTGTGTCACACGGCAATACCTGAGACCGATGAAGAGTCCGGGAATGTCTCTTATGAAGCTGAGTCTCCGGATGAAGCTGCGTTTGTTGTTGCAGCCCGAGAGTTCGGGTTCGAGTTCTTTAACCGGACACAAAATGGGATCTCTTTTCGTGAACTGGATCTTGTATCGGGAGAGAAAGTTGAAAGGGTTTATAGGTTACTAAACGTTCTTGAATTCAATAGCACTAGGAAGAGAATGTCTGTTATTGTAAGAGACGATGACGGGAAGCTCTTGCTGTTGTCTAAGGGAGCTGATAATGTAATGTTCGAAAGACTTGCAAAGAACGGTCGTCAATTCGAGGCAAAAACCCAAGAACATGTAAACCAATATGCAGATGCAGGTCTAAGGACTCTAGTACTTGCATACCGTGAGGTTGATGAGAATGAGTACATAGAGTTCAATAAGAGTTTCAATGAAGCTAAGGCTTCCGTGAGCGAGGATCGTGAAGCTTTAATAGACGAAATCACGGATAAAATGGAACGTGATCTTATTCTCCTTGGTGCTACTGCTGTTGAAGACAAACTTCAGAATGGGGTCCCGGAATGTATTGACAAACTTGCTCAAGCTGGGATTAAGATTTGGGTTCTAACTGGAGACAAAATGGAAACAGCTATCAATATTGGATTTGCATCTAGTTTACTAAGACAAGAGATGAAGCAGATCATCATCAATCTTGAGACACCTCAGATCAAATCTCTAGAGAAATCTGGAGGCAAAGACGAAATCGAATTGGCATCAAGAGAAAGCGTTGTGATGCAACTACAAGAAGGAAAGGCCTTACTCGCTGCATCAGGCGCGAGCTCTGAAGCGTTTGCTTTGATCATCGATGGGAAATCGCTAACCTACGCCCTCGAGGACGAAATCAAGAAAATGTTTCTTGATCTTGCCACTAGTTGTGCCTCTGTGATATGCTGTAGATCATCACCTAAACAGAAAGCATTGGTAACGCGACTGGTTAAGTCCGGAACTGGGAAAACAACTTTAGCAATTGGCGATGGAGCAAACGATGTAGGTATGCTTCAAGAAGCAGACATTGGTGTAGGAATAAGCGGTGTTGAAGGAATGCAAGCAGTAATGTCTAGTGATATTGCCATTGCCCAATTCCGATATCTAGAACGTTTATTGCTTGTCCATGGTCATTGGTGTTACAGCAGAATCGCATCCATGATATGTTACTTCTTCTACAAGAACATCACCTTCGGAGTCACGGTGTTCTTATATGAAGCATATACTTCCTTCTCTGGACAACCAGCATATAACGACTGGTTTCTTTCTCTTTTCAACGTCTTCTTCTCCTCTCTTCCCGTCATTGCCCTAGGAGTCTTTGATCAAGACGTCTCAGCTCGCTTCTGTTACAAGTTTCCATTGCTATACCAAGAAGGTGTGCAGAACATTCTCTTCAGCTGGAAAAGGATTATCGGATGGATGTTCAATGGATTCATAAGCGCTCTCGCCATTTTCTTCCTCTGCAAGGAATCTCTTAAACACCAGCTATTTGACCCAGATGGCAAAACCGCAGGCCGGGAAATCCTCGGTGGAACAATGTACACTTGCGTTGTGTGGGTTGTCAATCTCCAAATGGCTTTATCAATAAGTTACTTCACTTGGGTCCAACACATTGTGATCTGGGGATCAATAGCCTTCTGGTACATCTTCCTCATGATCTATGGCGCTATGACCCCAAGTTTCTCTACCGATGCTTACATGGTCTTCCTCGAAGCCCTAGCTCCTGCTCCTTCATACTGGCTCACGACTCTCTTTGTGATGATCTTCGCTTTGATCCCTTACTTCGTCTACAAGTCAGTGCAAATGAGGTTTTTCCCTAAATACCATCAAATGATTCAATGGATTCGGTACGAGGGTCACTCCAATGATCCTGAGTTCGTTGAGATGGTGAGGCAGAGGTCGATTAGGCCCACCACCGTCGGATACACCGCGAGAAGAGCAGCTAGTGTACGGCGCTCCGCTAGGTTTCACGATCAGATCTATAAGGATCTTGTCGGTGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase Hydrolase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1202

Amino Acids

136.28

Weight (kDa)

5.69

Isoelectric Point (pI)

39.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	42 - 108	6.4e-22	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	513 - 709	4.2e-20	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	891 - 1142	2.4e-88	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13210 AT1G26130 AT1G26130 AT1G26130 AT1G26130 AT1G68710 AT1G68710 AT1G68710 AT3G25610
fragaria_vesca	FvH4_4g28450 FvH4_5g12920 FvH4_5g12920
malus_domestica	MD06G1209100.v1.1 MD13G1050400.v1.1 MD14G1219500.v1.1 MD16G1051100.v1.1
prunus_persica	Prupe.1G301500_v2.0.a1 Prupe.5G214200_v2.0.a1
pyrus_communis	pycom06g18670 pycom14g18190 pycom16g04490
rosa_chinensis	RchiOBHm_Chr4g0436411 RchiOBHm_Chr7g0184301
rosa_laevigata	RLG00000004988 RLG00000006521
rosa_multiflora	Rmu_sc0000579.1_g000001 Rmu_sc0013812.1_g000007
rosa_roxburghii	Rroxscaffold_3G00269750 Rroxscaffold_5G00377570
rosa_rugosa	Rorug04G0293600
rosa_samantha	Rh4AG348000 Rh4CG371300 Rh7AG081300 Rh7CG066300 Rh7DG065900
rosa_wichuraiana	Rw4G030420 Rw7G005410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2937
AbsI	CCTCGAGG	1 cut(s)	2450
Acc36I	ACCTGC	1 cut(s)	1928
AccB1I	GGYRCC	1 cut(s)	384
AccI	GTMKAC	1 cut(s)	3393
AccII	CGCG	6 cut(s)	1229, 1343, 1362, 2396, 2548, 3536
AccIII	TCCGGA	2 cut(s)	1627, 2561
AclI	AACGTT	2 cut(s)	1764, 2716
AcsI	RAATTY	3 cut(s)	859, 1246, 1772
AcuI	CTGAAG	5 cut(s)	1154, 1392, 2108, 2424, 2983
AcyI	GRCGYC	2 cut(s)	385, 2934
AdeI	CACNNNGTG	1 cut(s)	3220
AfaI	GTAC	9 cut(s)	432, 815, 1205, 1956, 1988, 3146, 3248, 3455, 3555
AfeI	AGCGCT	1 cut(s)	3046
AfiI	CCNNNNNNNGG	3 cut(s)	2568, 3070, 3120
AflIII	ACRYGT	1 cut(s)	1915
AhlI	ACTAGT	1 cut(s)	2489
AjuI	GAANNNNNNNTTGG	2 cut(s)	2616, 2648
AleI	CACNNNNGTG	1 cut(s)	848
Alw21I	GWGCWC	3 cut(s)	325, 1072, 2402
Ama87I	CYCGRG	2 cut(s)	1656, 2450
Aor13HI	TCCGGA	2 cut(s)	1627, 2561
Aor51HI	AGCGCT	1 cut(s)	3046
AoxI	GGCC	3 cut(s)	2373, 3118, 3512
ApeKI	GCWGC	8 cut(s)	152, 1079, 1516, 1526, 1637, 1652, 2384, 3545
ApoI	RAATTY	3 cut(s)	859, 1246, 1772
ArsI	GACNNNNNNTTYG	2 cut(s)	1231, 1263
Asp700I	GAANNNNTTC	1 cut(s)	1544
AspA2I	CCTAGG	1 cut(s)	2914
AspLEI	GCGC	6 cut(s)	387, 1231, 2396, 3047, 3272, 3561
AspS9I	GGNCC	6 cut(s)	8, 104, 1454, 2134, 3208, 3513
AsuC2I	CCSGG	5 cut(s)	108, 141, 1600, 2138, 3122
AsuHPI	GGTGA	9 cut(s)	265, 421, 605, 823, 862, 1522, 2514, 2785, 3505
AsuII	TTCGAA	1 cut(s)	1866
AvaI	CYCGRG	2 cut(s)	1656, 2450
AvaII	GGWCC	5 cut(s)	8, 104, 1454, 2134, 3208
AvrII	CCTAGG	1 cut(s)	2914
AxyI	CCTNAGG	2 cut(s)	1458, 1521
BaeI	ACNNNNGTAYC	2 cut(s)	3445, 3478
BanI	GGYRCC	1 cut(s)	384
BanII	GRGCYC	2 cut(s)	1072, 2402
BarI	GAAGNNNNNNTAC	4 cut(s)	1106, 1138, 2601, 2633
BauI	CACGAG	1 cut(s)	117
BbsI	GAAGAC	3 cut(s)	2121, 2878, 3301
Bbv12I	GWGCWC	3 cut(s)	325, 1072, 2402
BbvI	GCAGC	8 cut(s)	164, 1066, 1513, 1528, 1624, 1664, 2371, 3557
BccI	CCATC	8 cut(s)	883, 1014, 2420, 2588, 3015, 3098, 3438, 3484
BceAI	ACGGC	4 cut(s)	299, 1514, 1587, 3572
BcgI	CGANNNNNNTGC	4 cut(s)	227, 261, 1856, 1890
BciVI	GTATCC	1 cut(s)	3521
BclI	TGATCA	2 cut(s)	2418, 2926
BcnI	CCSGG	5 cut(s)	108, 141, 1600, 2138, 3122
BcuI	ACTAGT	1 cut(s)	2489
BfmI	CTRYAG	1 cut(s)	2512
BfoI	RGCGCY	4 cut(s)	388, 3048, 3273, 3562
BfuAI	ACCTGC	1 cut(s)	1928
BfuI	GTATCC	1 cut(s)	3521
BglII	AGATCT	2 cut(s)	45, 3582
BisI	GCNGC	8 cut(s)	153, 1080, 1517, 1527, 1638, 1653, 2385, 3546
BlnI	CCTAGG	1 cut(s)	2914
BlsI	GCNGC	8 cut(s)	154, 1081, 1518, 1528, 1639, 1654, 2386, 3547
BmcAI	AGTACT	1 cut(s)	1956
Bme1390I	CCNGG	5 cut(s)	108, 141, 1600, 2138, 3122
Bme18I	GGWCC	5 cut(s)	8, 104, 1454, 2134, 3208
BmeT110I	CYCGRG	2 cut(s)	1656, 2450
BmgT120I	GGNCC	6 cut(s)	8, 104, 1454, 2134, 3208, 3513
BmiI	GGNNCC	6 cut(s)	106, 313, 386, 2135, 2136, 3209
BmrFI	CCNGG	5 cut(s)	108, 141, 1600, 2138, 3122
BmrI	ACTGGG	1 cut(s)	2577
BmsI	GCATC	8 cut(s)	1030, 1924, 2237, 2342, 2343, 2396, 2768, 3286
BmuI	ACTGGG	1 cut(s)	2577
BpiI	GAAGAC	3 cut(s)	2121, 2878, 3301
BplI	GAGNNNNNCTC	2 cut(s)	3449, 3481
BpmI	CTGGAG	2 cut(s)	2211, 2328
Bpu10I	CCTNAGC	1 cut(s)	2019
Bpu14I	TTCGAA	1 cut(s)	1866
BpuEI	CTTGAG	2 cut(s)	2145, 2294
BpuMI	CCSGG	5 cut(s)	108, 141, 1600, 2138, 3122
Bsa29I	ATCGAT	1 cut(s)	2424
BsaBI	GATNNNNATC	3 cut(s)	1154, 2227, 2264
BsaHI	GRCGYC	2 cut(s)	385, 2934
BsaI	GGTCTC	1 cut(s)	1577
BsaJI	CCNNGG	4 cut(s)	2095, 2731, 2914, 3130
BsaWI	WCCGGW	6 cut(s)	186, 275, 833, 1627, 1683, 2561
BsaXI	ACNNNNNCTCC	8 cut(s)	477, 507, 810, 840, 1722, 1752, 2793, 2823
Bsc4I	CCNNNNNNNGG	3 cut(s)	2568, 3070, 3120
Bse1I	ACTGG	6 cut(s)	1719, 2194, 2556, 2572, 2867, 3347
Bse21I	CCTNAGG	2 cut(s)	1458, 1521
Bse3DI	GCAATG	3 cut(s)	2691, 2907, 2963
Bse8I	GATNNNNATC	3 cut(s)	1154, 2227, 2264
BseAI	TCCGGA	2 cut(s)	1627, 2561
BseCI	ATCGAT	1 cut(s)	2424
BseDI	CCNNGG	4 cut(s)	2095, 2731, 2914, 3130
BseGI	GGATG	7 cut(s)	1125, 1438, 1489, 1636, 2759, 3026, 3030
BseJI	GATNNNNATC	3 cut(s)	1154, 2227, 2264
BseLI	CCNNNNNNNGG	3 cut(s)	2568, 3070, 3120
BseMI	GCAATG	3 cut(s)	2691, 2907, 2963
BseMII	CTCAG	6 cut(s)	1512, 1572, 1611, 2297, 2952, 3468
BseNI	ACTGG	6 cut(s)	1719, 2194, 2556, 2572, 2867, 3347
BseRI	GAGGAG	1 cut(s)	2884
BseXI	GCAGC	8 cut(s)	164, 1066, 1513, 1528, 1624, 1664, 2371, 3557
BseYI	CCCAGC	1 cut(s)	2165
BsgI	GTGCAG	1 cut(s)	3005
Bsh1236I	CGCG	6 cut(s)	1229, 1343, 1362, 2396, 2548, 3536
Bsh1285I	CGRYCG	1 cut(s)	1888
BshFI	GGCC	3 cut(s)	2375, 3120, 3514
BshNI	GGYRCC	1 cut(s)	384
BshVI	ATCGAT	1 cut(s)	2424
BsiEI	CGRYCG	1 cut(s)	1888
BsiHKAI	GWGCWC	3 cut(s)	325, 1072, 2402
BsiHKCI	CYCGRG	2 cut(s)	1656, 2450
BslFI	GGGAC	2 cut(s)	1312, 2120
BslI	CCNNNNNNNGG	3 cut(s)	2568, 3070, 3120
BsmBI	CGTCTC	4 cut(s)	569, 590, 1806, 2941
BsmFI	GGGAC	2 cut(s)	1312, 2120
BsmI	GAATGC	1 cut(s)	2667
BsnI	GGCC	3 cut(s)	2375, 3120, 3514
Bso31I	GGTCTC	1 cut(s)	1577
BsoBI	CYCGRG	2 cut(s)	1656, 2450
Bsp119I	TTCGAA	1 cut(s)	1866
Bsp1286I	GDGCHC	3 cut(s)	325, 1072, 2402
Bsp13I	TCCGGA	2 cut(s)	1627, 2561
Bsp1407I	TGTACA	1 cut(s)	3144
Bsp19I	CCATGG	1 cut(s)	2731
BspANI	GGCC	3 cut(s)	2375, 3120, 3514
BspCNI	CTCAG	6 cut(s)	1513, 1573, 1612, 2296, 2951, 3469
BspDI	ATCGAT	1 cut(s)	2424
BspEI	TCCGGA	2 cut(s)	1627, 2561
BspFNI	CGCG	6 cut(s)	1229, 1343, 1362, 2396, 2548, 3536
BspHI	TCATGA	1 cut(s)	3258
BspLI	GGNNCC	6 cut(s)	106, 313, 386, 2135, 2136, 3209
BspMI	ACCTGC	1 cut(s)	1928
BspQI	GCTCTTC	1 cut(s)	3535
BspT104I	TTCGAA	1 cut(s)	1866
BspT107I	GGYRCC	1 cut(s)	384
BspTNI	GGTCTC	1 cut(s)	1577
BsrDI	GCAATG	3 cut(s)	2691, 2907, 2963
BsrGI	TGTACA	1 cut(s)	3144
BsrI	ACTGG	6 cut(s)	1719, 2194, 2556, 2572, 2867, 3347
BssECI	CCNNGG	4 cut(s)	2095, 2731, 2914, 3130
BssNI	GRCGYC	2 cut(s)	385, 2934
BssSI	CACGAG	1 cut(s)	117
BssT1I	CCWWGG	3 cut(s)	2095, 2731, 2914
Bst2BI	CACGAG	1 cut(s)	117
Bst4CI	ACNGT	6 cut(s)	205, 593, 1886, 1967, 2809, 3523
Bst6I	CTCTTC	7 cut(s)	236, 738, 1587, 1784, 2904, 3002, 3535
BstACI	GRCGYC	2 cut(s)	385, 2934
BstAUI	TGTACA	1 cut(s)	3144
BstBI	TTCGAA	1 cut(s)	1866
BstC8I	GCNNGC	6 cut(s)	1233, 1557, 2398, 2667, 2944, 3118
BstDSI	CCRYGG	1 cut(s)	2731
BstENI	CCTNNNNNAGG	1 cut(s)	3068
BstF5I	GGATG	7 cut(s)	1125, 1438, 1489, 1636, 2759, 3026, 3030
BstFNI	CGCG	6 cut(s)	1229, 1343, 1362, 2396, 2548, 3536
BstH2I	RGCGCY	4 cut(s)	388, 3048, 3273, 3562
BstHHI	GCGC	6 cut(s)	387, 1231, 2396, 3047, 3272, 3561
BstMCI	CGRYCG	1 cut(s)	1888
BstMWI	GCNNNNNNNGC	6 cut(s)	320, 1076, 1349, 2381, 2393, 3542
BstNSI	RCATGY	1 cut(s)	1919
BstSCI	CCNGG	5 cut(s)	106, 139, 1598, 2136, 3120
BstSFI	CTRYAG	1 cut(s)	2512
BstUI	CGCG	6 cut(s)	1229, 1343, 1362, 2396, 2548, 3536
BstV1I	GCAGC	8 cut(s)	164, 1066, 1513, 1528, 1624, 1664, 2371, 3557
BstV2I	GAAGAC	3 cut(s)	2121, 2878, 3301
BstX2I	RGATCY	7 cut(s)	45, 526, 694, 1698, 1717, 3582, 3592
BstYI	RGATCY	7 cut(s)	45, 526, 694, 1698, 1717, 3582, 3592
Bsu15I	ATCGAT	1 cut(s)	2424
Bsu36I	CCTNAGG	2 cut(s)	1458, 1521
BsuI	GTATCC	1 cut(s)	3521
BsuRI	GGCC	3 cut(s)	2375, 3120, 3514
BsuTUI	ATCGAT	1 cut(s)	2424
BtgI	CCRYGG	1 cut(s)	2731
BtgZI	GCGATG	1 cut(s)	2607
BtsCI	GGATG	7 cut(s)	1125, 1438, 1489, 1636, 2759, 3026, 3030
BtsI	GCAGTG	1 cut(s)	1098
BtsIMutI	CAGTG	2 cut(s)	1098, 3408
BveI	ACCTGC	1 cut(s)	1928
Cac8I	GCNNGC	6 cut(s)	1233, 1557, 2398, 2667, 2944, 3118
CciI	TCATGA	1 cut(s)	3258
CfoI	GCGC	6 cut(s)	387, 1231, 2396, 3047, 3272, 3561
Cfr13I	GGNCC	6 cut(s)	8, 104, 1454, 2134, 3208, 3513
ClaI	ATCGAT	1 cut(s)	2424
CseI	GACGC	1 cut(s)	1368
Csp6I	GTAC	9 cut(s)	431, 814, 1204, 1955, 1987, 3145, 3247, 3454, 3554
CviAII	CATG	6 cut(s)	839, 1916, 2732, 2764, 3259, 3304
CviQI	GTAC	9 cut(s)	431, 814, 1204, 1955, 1987, 3145, 3247, 3454, 3554
DinI	GGCGCC	1 cut(s)	386
DraI	TTTAAA	1 cut(s)	664
DraIII	CACNNNGTG	1 cut(s)	3220
Eam1104I	CTCTTC	7 cut(s)	236, 738, 1587, 1784, 2904, 3002, 3535
EarI	CTCTTC	7 cut(s)	236, 738, 1587, 1784, 2904, 3002, 3535
EciI	GGCGGA	2 cut(s)	340, 539
Ecl136II	GAGCTC	2 cut(s)	1070, 2400
Eco130I	CCWWGG	3 cut(s)	2095, 2731, 2914
Eco147I	AGGCCT	1 cut(s)	2375
Eco24I	GRGCYC	2 cut(s)	1072, 2402
Eco31I	GGTCTC	1 cut(s)	1577
Eco32I	GATATC	2 cut(s)	1048, 2708
Eco47I	GGWCC	5 cut(s)	8, 104, 1454, 2134, 3208
Eco47III	AGCGCT	1 cut(s)	3046
Eco53kI	GAGCTC	2 cut(s)	1070, 2400
Eco57I	CTGAAG	5 cut(s)	1154, 1392, 2108, 2424, 2983
Eco81I	CCTNAGG	2 cut(s)	1458, 1521
Eco88I	CYCGRG	2 cut(s)	1656, 2450
EcoICRI	GAGCTC	2 cut(s)	1070, 2400
EcoNI	CCTNNNNNAGG	1 cut(s)	3068
EcoO109I	RGGNCCY	2 cut(s)	104, 2134
EcoRI	GAATTC	2 cut(s)	859, 1772
EcoRV	GATATC	2 cut(s)	1048, 2708
EcoT14I	CCWWGG	3 cut(s)	2095, 2731, 2914
EcoT38I	GRGCYC	2 cut(s)	1072, 2402
EgeI	GGCGCC	1 cut(s)	386
EheI	GGCGCC	1 cut(s)	386
ErhI	CCWWGG	3 cut(s)	2095, 2731, 2914
Esp3I	CGTCTC	4 cut(s)	569, 590, 1806, 2941
FaeI	CATG	6 cut(s)	842, 1919, 2735, 2767, 3262, 3307
FalI	AAGNNNNNCTT	2 cut(s)	2106, 2138
FaqI	GGGAC	2 cut(s)	1312, 2120
FatI	CATG	6 cut(s)	838, 1915, 2731, 2763, 3258, 3303
FauI	CCCGC	2 cut(s)	1234, 1336
FauNDI	CATATG	1 cut(s)	1200
FbaI	TGATCA	2 cut(s)	2418, 2926
FblI	GTMKAC	1 cut(s)	3393
Fnu4HI	GCNGC	8 cut(s)	153, 1080, 1517, 1527, 1638, 1653, 2385, 3546
FokI	GGATG	7 cut(s)	1112, 1445, 1496, 1643, 2746, 3033, 3037
FriOI	GRGCYC	2 cut(s)	1072, 2402
Fsp4HI	GCNGC	8 cut(s)	153, 1080, 1517, 1527, 1638, 1653, 2385, 3546
GlaI	GCGC	6 cut(s)	386, 1230, 2395, 3046, 3271, 3560
GluI	GCNGC	8 cut(s)	153, 1080, 1517, 1527, 1638, 1653, 2385, 3546
GsaI	CCCAGC	1 cut(s)	2169
GsuI	CTGGAG	2 cut(s)	2211, 2328
HaeII	RGCGCY	4 cut(s)	388, 3048, 3273, 3562
HaeIII	GGCC	3 cut(s)	2375, 3120, 3514
HgaI	GACGC	1 cut(s)	1368
HhaI	GCGC	6 cut(s)	387, 1231, 2396, 3047, 3272, 3561
Hin1I	GRCGYC	2 cut(s)	385, 2934
Hin1II	CATG	6 cut(s)	842, 1919, 2735, 2767, 3262, 3307
Hin6I	GCGC	6 cut(s)	385, 1229, 2394, 3045, 3270, 3559
HinP1I	GCGC	6 cut(s)	385, 1229, 2394, 3045, 3270, 3559
HincII	GTYRAC	2 cut(s)	192, 291
HindII	GTYRAC	2 cut(s)	192, 291
HindIII	AAGCTT	2 cut(s)	791, 2046
HphI	GGTGA	9 cut(s)	265, 421, 605, 823, 862, 1522, 2514, 2785, 3505
Hpy99I	CGWCG	5 cut(s)	165, 249, 440, 593, 3527
HpyAV	CCTTC	8 cut(s)	362, 2360, 2651, 2806, 2845, 2972, 3250, 3345
HpyCH4III	ACNGT	6 cut(s)	205, 593, 1886, 1967, 2809, 3523
HpyCH4IV	ACGT	9 cut(s)	160, 183, 1143, 1307, 1764, 2080, 2716, 2883, 2934
HpyF10VI	GCNNNNNNNGC	6 cut(s)	320, 1076, 1349, 2381, 2393, 3542
HpySE526I	ACGT	9 cut(s)	160, 183, 1143, 1307, 1764, 2080, 2716, 2883, 2934
Hsp92I	GRCGYC	2 cut(s)	385, 2934
Hsp92II	CATG	6 cut(s)	842, 1919, 2735, 2767, 3262, 3307
HspAI	GCGC	6 cut(s)	385, 1229, 2394, 3045, 3270, 3559
KasI	GGCGCC	1 cut(s)	384
KflI	GGGWCCC	1 cut(s)	2134
Kpn2I	TCCGGA	2 cut(s)	1627, 2561
Ksp22I	TGATCA	2 cut(s)	2418, 2926
LguI	GCTCTTC	1 cut(s)	3535
LmnI	GCTCC	8 cut(s)	311, 818, 1075, 1847, 2597, 3331, 3337, 3566
Lsp1109I	GCAGC	8 cut(s)	164, 1066, 1513, 1528, 1624, 1664, 2371, 3557
LweI	GCATC	8 cut(s)	1030, 1924, 2237, 2342, 2343, 2396, 2768, 3286
MaeII	ACGT	9 cut(s)	160, 183, 1143, 1307, 1764, 2080, 2716, 2883, 2934
MfeI	CAATTG	1 cut(s)	2586
MflI	RGATCY	7 cut(s)	45, 526, 694, 1698, 1717, 3582, 3592
MhlI	GDGCHC	3 cut(s)	325, 1072, 2402
Mly113I	GGCGCC	1 cut(s)	385
MlyI	GAGTC	6 cut(s)	1604, 1631, 1942, 2811, 2928, 3346
MmeI	TCCRAC	5 cut(s)	143, 703, 937, 3235, 3505
MroI	TCCGGA	2 cut(s)	1627, 2561
MroXI	GAANNNNTTC	1 cut(s)	1544
MslI	CAYNNNNRTG	3 cut(s)	848, 1199, 3468
MspA1I	CMGCKG	2 cut(s)	155, 3003
MspR9I	CCNGG	5 cut(s)	108, 141, 1600, 2138, 3122
MunI	CAATTG	1 cut(s)	2586
Mva1269I	GAATGC	1 cut(s)	2667
MvnI	CGCG	6 cut(s)	1229, 1343, 1362, 2396, 2548, 3536
MwoI	GCNNNNNNNGC	6 cut(s)	320, 1076, 1349, 2381, 2393, 3542
NarI	GGCGCC	1 cut(s)	385
NciI	CCSGG	5 cut(s)	108, 141, 1600, 2138, 3122
NcoI	CCATGG	1 cut(s)	2731
NdeI	CATATG	1 cut(s)	1200
NlaIII	CATG	6 cut(s)	842, 1919, 2735, 2767, 3262, 3307
NlaIV	GGNNCC	6 cut(s)	106, 313, 386, 2135, 2136, 3209
NmuCI	GTSAC	4 cut(s)	271, 1565, 2803, 3461
NspI	RCATGY	1 cut(s)	1919
NspV	TTCGAA	1 cut(s)	1866
OliI	CACNNNNGTG	1 cut(s)	848
PaeR7I	CTCGAG	1 cut(s)	2450
PagI	TCATGA	1 cut(s)	3258
PceI	AGGCCT	1 cut(s)	2375
PciI	ACATGT	1 cut(s)	1915
PciSI	GCTCTTC	1 cut(s)	3535
PcsI	WCGNNNNNNNCGW	1 cut(s)	822
PctI	GAATGC	1 cut(s)	2667
PdmI	GAANNNNTTC	1 cut(s)	1544
PfoI	TCCNGGA	2 cut(s)	1598, 2136
PkrI	GCNGC	8 cut(s)	154, 1081, 1518, 1528, 1639, 1654, 2386, 3547
PleI	GAGTC	6 cut(s)	1603, 1630, 1942, 2810, 2927, 3346
PluTI	GGCGCC	1 cut(s)	388
PpsI	GAGTC	6 cut(s)	1603, 1630, 1942, 2810, 2927, 3346
PpuMI	RGGWCCY	2 cut(s)	104, 2134
PscI	ACATGT	1 cut(s)	1915
Psp124BI	GAGCTC	2 cut(s)	1072, 2402
Psp1406I	AACGTT	2 cut(s)	1764, 2716
Psp5II	RGGWCCY	2 cut(s)	104, 2134
PspFI	CCCAGC	1 cut(s)	2165
PspN4I	GGNNCC	6 cut(s)	106, 313, 386, 2135, 2136, 3209
PspPI	GGNCC	6 cut(s)	8, 104, 1454, 2134, 3208, 3513
PspPPI	RGGWCCY	2 cut(s)	104, 2134
PspXI	VCTCGAGB	1 cut(s)	2450
PsrI	GAACNNNNNNTAC	2 cut(s)	1979, 2011
PsuI	RGATCY	7 cut(s)	45, 526, 694, 1698, 1717, 3582, 3592
PvuII	CAGCTG	2 cut(s)	155, 3003
RsaI	GTAC	9 cut(s)	432, 815, 1205, 1956, 1988, 3146, 3248, 3455, 3555
RsaNI	GTAC	9 cut(s)	431, 814, 1204, 1955, 1987, 3145, 3247, 3454, 3554
RseI	CAYNNNNRTG	3 cut(s)	848, 1199, 3468
SacI	GAGCTC	2 cut(s)	1072, 2402
SapI	GCTCTTC	1 cut(s)	3535
SatI	GCNGC	8 cut(s)	153, 1080, 1517, 1527, 1638, 1653, 2385, 3546
Sau96I	GGNCC	6 cut(s)	8, 104, 1454, 2134, 3208, 3513
ScaI	AGTACT	1 cut(s)	1956
SchI	GAGTC	6 cut(s)	1604, 1631, 1942, 2811, 2928, 3346
ScrFI	CCNGG	5 cut(s)	108, 141, 1600, 2138, 3122
SduI	GDGCHC	3 cut(s)	325, 1072, 2402
SfaNI	GCATC	8 cut(s)	1030, 1924, 2237, 2342, 2343, 2396, 2768, 3286
SfcI	CTRYAG	1 cut(s)	2512
SfoI	GGCGCC	1 cut(s)	386
Sfr274I	CTCGAG	1 cut(s)	2450
SfuI	TTCGAA	1 cut(s)	1866
SinI	GGWCC	5 cut(s)	8, 104, 1454, 2134, 3208
SlaI	CTCGAG	1 cut(s)	2450
SmiMI	CAYNNNNRTG	3 cut(s)	848, 1199, 3468
SmlI	CTYRAG	3 cut(s)	2160, 2273, 2450
SmoI	CTYRAG	3 cut(s)	2160, 2273, 2450
SpeI	ACTAGT	1 cut(s)	2489
SseBI	AGGCCT	1 cut(s)	2375
SspDI	GGCGCC	1 cut(s)	384
SspI	AATATT	2 cut(s)	450, 2218
SstI	GAGCTC	2 cut(s)	1072, 2402
StuI	AGGCCT	1 cut(s)	2375
StyD4I	CCNGG	5 cut(s)	106, 139, 1598, 2136, 3120
StyI	CCWWGG	3 cut(s)	2095, 2731, 2914
TaaI	ACNGT	6 cut(s)	205, 593, 1886, 1967, 2809, 3523
TaiI	ACGT	9 cut(s)	163, 186, 1146, 1310, 1767, 2083, 2719, 2886, 2937
TaqII	GACCGA	1 cut(s)	1601
TatI	WGTACW	5 cut(s)	430, 1203, 1954, 1986, 3144
TscAI	CASTG	2 cut(s)	1105, 3408
TseFI	GTSAC	4 cut(s)	271, 1565, 2803, 3461
TseI	GCWGC	8 cut(s)	152, 1079, 1516, 1526, 1637, 1652, 2384, 3545
Tsp45I	GTSAC	4 cut(s)	271, 1565, 2803, 3461
TspGWI	ACGGA	9 cut(s)	233, 453, 770, 831, 1020, 1232, 1252, 2017, 2081
TspRI	CASTG	2 cut(s)	1105, 3408
VpaK11BI	GGWCC	5 cut(s)	8, 104, 1454, 2134, 3208
XagI	CCTNNNNNAGG	1 cut(s)	3068
XapI	RAATTY	3 cut(s)	859, 1246, 1772
XbaI	TCTAGA	2 cut(s)	2296, 2710
XceI	RCATGY	1 cut(s)	1919
XhoI	CTCGAG	1 cut(s)	2450
XmaJI	CCTAGG	1 cut(s)	2914
XmiI	GTMKAC	1 cut(s)	3393
XmnI	GAANNNNTTC	1 cut(s)	1544
ZraI	GACGTC	1 cut(s)	2935
ZrmI	AGTACT	1 cut(s)	1956

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.