Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003148

Physical Location & Seq

Genomic Coordinates Forward (+)

29093465 .. 29100494

Gene Structure 7030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g28450.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3558 bp

ATGAGGAGGAGTGGTGGGAGAAAGAGAAGGCTGCATTTCAGCAAGATCTATTCTTTCAGCTGTGGAAGAGCTTCTTTGAAGGAGGAGCATTCACAGATTGGAGGGCCAGGATTTTCCAGAGTGGTTTTCTGCAACGAACCGGATTCGTTTGAGGCCGGGATTCGAAATTATGCAGATAATTATGTCAGCACTACAAAGTATACAGTTGCTACATTCTTGCCCAAGTCTTTGTTTGAGCAATTCAGGAGGGTAGCTAACTTCTACTTCTTGGTCACTGGAATCTTGGCCTTTACTCCTCTGGCTCCATATTCAGCTGTCAGTGCTATTATTCCTCTGATCATCGTTATTGGCGCGACGATGACCAAGGAGGGGATCGAAGATTGGCGTCGAAAACAGCAGGATATTGAAGTGAACAATAGAAAGGTTAAAGTGCACAAGGGTAGTGGCGAGTTTGATTATACTGAATGGAAGAATCTGAGAGTGGGAGATATAGTGAGAGTGGAAAAGGATGAATTCTTTCCAACAGATCTCCTGTTACTTTCGTCTAGTTATGAAGATGCAATCTGCTATGTTGAGACAATGAACCTGGATGGGGAGACAAACTTAAAGTTGAAACAAGCATTGGATGTAACTTCATCGTTACAGGAGGACACCAGCATCAGCGATTTTCATGCCATGGTGAAATGTGAGGACCCAAATGCAAATTTGTACTCCTTTGTCGGAACTATGGATTTTGAAAAGCAGCAGTATCCCCTCTCTCCTCAACAGCTTCTTCTCAGAGACTCTAAACTCCGAAATACAGACTACATATACGGAGTGGTTATCTTCACCGGTGTTGATACAAAGGTTATTCAAAACTCTACTCCCCCTCCTTCAAAAAGAAGCAGAGTTGAGAAGAAGATGGATAAAATCATCTACCTCTTGTTTGGTGTTTTATTTACTTTGTCATCGGTTGGATCCATTTTCTTTGGCATTAAAACCAAAGATGACTTAAACAATGGGATCATGAAAAGGTGGTATCTGAAGCCAGATGATTCTACAGTTTTCTATGATCCCAAAAAAGCTCCTATTGCAGCACTTTATCACTTCCTGACTGCTCTGATGTTATATAGCTACCTCATCCCTATCTCCTTGTATGTGTCAATAGAGATTGTTAAAGTTCTTCAGAGCGTGTTCATCAATCAAGATATTCACATGTACTATGAAGAAACTGATAAACCAGCACATGCTCGTACCTCAAACTTGAATGAAGAACTTGGCCAAGTAGACACAATTCTTTCGGACAAAACCGGAACTTTGACATGCAACTCAATGGAGTTTATCAAATGTTCAGTGGCTGGAACAGCTTATGGCCGTGGTTTTACAGAGGTCGAGAGGTCTATGGGCAGGAGAAATGGTTCACCAGTTCATGAAGCTCTAATAGGGAAGGATGACACGGCACCCATTAAAGGCTTTAATTTTAAAGATGAAAGGATCATGTTTGGAAATTGGGTTAATGAGCCTCATGGAGATCTCATCCAGAAATTTTTCCGCTTATTAGCAGTCTGCCATACTGCCATTCCAGAAGTTGATGAAGTAACTGGGAAGGTTATGTACGAGGCTGAGTCTCCTGATGAAGCAGCATTTGTGATTGCAGCAAGAGAAGTTGGTTTCGAATTCTATAAAAGGACGCAAACAAGCATATCAGTGAGAGAGTTGGACAGAGCCTCAGGACAGCAAGTTGATAGGTTGTACACTCTTCTGAATGTGTTAGAGTTCAACAGCACAAGGAAGCGGATGTCTGTGATTGTAAGAAATGAGGAAGGAAAAGTATTATTGCTCTGTAAAGGTGCAGACAATGTCATGTTTGAAAGGCTTGCCAAAAATGGTAGGGAGTTCGAAGAAGAGACCAAGGAGCATTTAAATGGGTATGCTGACGCAGGGCTGAGGACTTTGATTCTTGCCTATCGTGAACTTCAGGAAGATGAATACACAGAGTTTAATGCAAAATTGATCAAGGCCAAGAACTCAATTAGTGCAGACCGTGAAGCATTGATTGATGAAGTAACAGATAATGTTGAGAAAGATCTAATTCTTCTTGGTGCAACAGCTGTTGAGGACAAACTTCAAAATGGGGTTCCCGATTGCATTGACAAGCTTGCCCAAGCAGGAATCAAGATTTGGGTTTTGACTGGAGACAAGATGGAAACTGCCATCAACATTGGGTTTGCCTGTAGCTTACTTAGACAAGGAATGACGCAGATTATGATAAATTTGGAGTCTCCAGAAATTAAGGTGCTGGAAAAGGAAGGAGATAAGGATGCCATCACCAAGGCATCAAGAGCAAGAGTCCTCCATCACATAGATAAGGGAAAGGCTCAACTTACAGCATCAAGTGGGGGCTCCGAGGCATTTGCGCTGATCATTGATGGAAAGTCTCTTGCGTATGCTCTCGAGGATGATATAAAGTCGTTGTTTCTAGAGCTTGCAATGGGCTGTGCATCTGTTATTTGTTGCCGTTCATCACCAAAACAGAAAGCACTGGTCACTAGACTGGTCAAATCTGGAACTGGTAAAACAACTCTTGCAATTGGTGATGGTGCCAATGATGTGGGAATGCTCCAAGAAGCAGATATTGGGATTGGAATTAGTGGTGTCGAAGGAATGCAGGCGGTCATGTCAAGTGATATTGCAATAGCACAATTTCGTTATTTGGAGCGCCTGCTGCTTGTTCATGGACATTGGTGTTACAGAAGGATCTCATCAATGATATGCTACTTCTTCTACAAGAACATCACATTTGGTTTAGCTGTGTTCCTATATGAGGCATCCACAACCTTCTCTGGACAACCTGTATACAATGACTGGTTTTTGTCACTGTATAATGTATTCTTCTCATCACTTCCGGTGGTTGCCATGGGAGTTTTCGACCAGGATGTTTCTGCACGATTTTGTCTCAAGTTTCCTCTACTATACCAAGAAGGAGTGCAAAATGTTCTATTCAGCTGGCGTAGAATAATTGGTTGGATGTTGAATGGACTAATAAGCGCTGTGATCATCTTCTTTTTCTGCATGAAAGCGCTACAACCATGTGCCTTCAATCCAGATGGAAAAACTGCTGGGAAGGACATTCTAGGAGCAATAATGTACACATGCACCGTTTGGGTTGTGAACTTGCAGATGGCACTTGCAATAAGTTACTTCACCTTGATACAACATCTTTTCATCTGGGGTTCCATTACTCTCTGGTATCTGTTTATGTTAGCATATGGAGCCATGTCACCCACACTCTCTACCAATGCTTACAAAGTCTTCGTGGAAACCCTTGCCCCCACCCCTTCTTTCTGGCTTATCACATTGCTTGTGCCAATCTCAGCTCTACTTCCATATTTTACATACTCATCACTTCGGATGCGGTTCTTTCCTTTGTACCATAAAATGATACAATGGATTAGGTACGAGGGACAGTCAAATGATCCCGAGTTTTGTGATATGGTTCGGCAGAGATCTTTGAGGCCAACAACCGTCGGTTTCACAGCACGGTTAGCAGCTAGGACGACCAACAAACTAAGAAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1186

Amino Acids

133.72

Weight (kDa)

6.81

Isoelectric Point (pI)

36.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	42 - 109	3.2e-23	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	507 - 703	3.1e-19	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	885 - 1135	3.8e-88	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13210 AT1G26130 AT1G26130 AT1G26130 AT1G26130 AT1G68710 AT1G68710 AT1G68710 AT3G25610
fragaria_vesca	FvH4_4g28450 FvH4_5g12920 FvH4_5g12920
malus_domestica	MD06G1209100.v1.1 MD13G1050400.v1.1 MD14G1219500.v1.1 MD16G1051100.v1.1
prunus_persica	Prupe.1G301500_v2.0.a1 Prupe.5G214200_v2.0.a1
pyrus_communis	pycom06g18670 pycom14g18190 pycom16g04490
rosa_chinensis	RchiOBHm_Chr4g0436411 RchiOBHm_Chr7g0184301
rosa_laevigata	RLG00000004988 RLG00000006521
rosa_multiflora	Rmu_sc0000579.1_g000001 Rmu_sc0013812.1_g000007
rosa_roxburghii	Rroxscaffold_3G00269750 Rroxscaffold_5G00377570
rosa_rugosa	Rorug04G0293600
rosa_samantha	Rh4AG348000 Rh4CG371300 Rh7AG081300 Rh7CG066300 Rh7DG065900
rosa_wichuraiana	Rw4G030420 Rw7G005410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1438, 2579
AccI	GTMKAC	3 cut(s)	200, 1266, 2835
AccII	CGCG	1 cut(s)	353
AciI	CCGC	4 cut(s)	1531, 1774, 2651, 3394
AclWI	GGATC	8 cut(s)	380, 951, 964, 1010, 1046, 1481, 2744, 3449
AcoI	YGGCCR	2 cut(s)	1258, 1351
AcsI	RAATTY	5 cut(s)	512, 703, 1523, 1655, 2251
AcuI	CTGAAG	3 cut(s)	1043, 1148, 1940
AcyI	GRCGYC	1 cut(s)	385
AfaI	GTAC	8 cut(s)	710, 1199, 1234, 1595, 1733, 3128, 3410, 3437
AfeI	AGCGCT	2 cut(s)	3028, 3060
AfiI	CCNNNNNNNGG	4 cut(s)	369, 592, 1448, 2803
AflIII	ACRYGT	1 cut(s)	1194
AgeI	ACCGGT	1 cut(s)	830
AjnI	CCWGG	3 cut(s)	106, 585, 2910
AjuI	GAANNNNNNNTTGG	8 cut(s)	605, 637, 2143, 2175, 2598, 2630, 2986, 3018
AloI	GAACNNNNNNTCC	2 cut(s)	1381, 1413
Alw21I	GWGCWC	1 cut(s)	435
Alw26I	GTCTC	9 cut(s)	569, 590, 774, 1611, 1880, 2169, 2265, 2421, 2939
Alw44I	GTGCAC	1 cut(s)	431
AlwI	GGATC	8 cut(s)	380, 951, 964, 1010, 1046, 1481, 2744, 3449
AlwNI	CAGNNNCTG	1 cut(s)	1337
Ama87I	CYCGRG	2 cut(s)	2432, 3458
Aor51HI	AGCGCT	2 cut(s)	3028, 3060
AoxI	GGCC	7 cut(s)	104, 153, 285, 1258, 1351, 1998, 3494
ApaLI	GTGCAC	1 cut(s)	431
ApeKI	GCWGC	7 cut(s)	31, 742, 1073, 1619, 1634, 2704, 3527
ApoI	RAATTY	5 cut(s)	512, 703, 1523, 1655, 2251
AsiGI	ACCGGT	1 cut(s)	830
Asp700I	GAANNNNTTC	4 cut(s)	70, 516, 1396, 1526
AspLEI	GCGC	5 cut(s)	353, 2398, 2700, 3029, 3061
AspS9I	GGNCC	2 cut(s)	104, 691
AsuC2I	CCSGG	1 cut(s)	157
AsuHPI	GGTGA	8 cut(s)	691, 820, 1392, 2299, 2496, 2585, 3175, 3252
AsuII	TTCGAA	3 cut(s)	163, 1653, 1878
AvaI	CYCGRG	2 cut(s)	2432, 3458
AvaII	GGWCC	1 cut(s)	691
AxyI	CCTNAGG	1 cut(s)	1708
BaeGI	GKGCMC	1 cut(s)	435
BaeI	ACNNNNGTAYC	2 cut(s)	831, 864
BalI	TGGCCA	1 cut(s)	1260
BamHI	GGATCC	1 cut(s)	956
BanI	GGYRCC	2 cut(s)	1438, 2579
BanII	GRGCYC	1 cut(s)	2384
BarI	GAAGNNNNNNTAC	2 cut(s)	1577, 1609
BbsI	GAAGAC	1 cut(s)	3283
Bbv12I	GWGCWC	1 cut(s)	435
BbvCI	CCTCAGC	1 cut(s)	1925
BbvI	GCAGC	7 cut(s)	18, 754, 1085, 1631, 1646, 2691, 3539
BceAI	ACGGC	3 cut(s)	1338, 1452, 2481
BcgI	CGANNNNNNTGC	4 cut(s)	653, 687, 2375, 2409
BciT130I	CCWGG	3 cut(s)	108, 587, 2912
BciVI	GTATCC	1 cut(s)	759
BclI	TGATCA	4 cut(s)	336, 1992, 2400, 3033
BcnI	CCSGG	1 cut(s)	157
BcoDI	GTCTC	9 cut(s)	569, 590, 774, 1611, 1880, 2169, 2265, 2421, 2939
BfaI	CTAG	5 cut(s)	546, 2459, 2529, 3113, 3531
BfmI	CTRYAG	2 cut(s)	1038, 2212
BfoI	RGCGCY	3 cut(s)	2701, 3030, 3062
BfuI	GTATCC	1 cut(s)	759
BglII	AGATCT	5 cut(s)	45, 526, 1510, 2065, 3485
BisI	GCNGC	7 cut(s)	32, 743, 1074, 1620, 1635, 2705, 3528
BlsI	GCNGC	7 cut(s)	33, 744, 1075, 1621, 1636, 2706, 3529
Bme1390I	CCNGG	4 cut(s)	108, 157, 587, 2912
Bme18I	GGWCC	1 cut(s)	691
BmeT110I	CYCGRG	2 cut(s)	2432, 3458
BmgT120I	GGNCC	2 cut(s)	104, 691
BmiI	GGNNCC	9 cut(s)	303, 693, 958, 1440, 2118, 2383, 2581, 3214, 3253
BmrFI	CCNGG	4 cut(s)	108, 157, 587, 2912
BmrI	ACTGGG	1 cut(s)	1590
BmsI	GCATC	8 cut(s)	547, 666, 2290, 2324, 2378, 2489, 2816, 3381
BmuI	ACTGGG	1 cut(s)	1590
BpiI	GAAGAC	1 cut(s)	3283
BpmI	CTGGAG	2 cut(s)	2193, 2247
Bpu10I	CCTNAGC	1 cut(s)	1925
Bpu14I	TTCGAA	3 cut(s)	163, 1653, 1878
BpuEI	CTTGAG	1 cut(s)	2921
BpuMI	CCSGG	1 cut(s)	157
BsaHI	GRCGYC	1 cut(s)	385
BsaI	GGTCTC	1 cut(s)	1880
BsaJI	CCNNGG	7 cut(s)	363, 675, 1354, 1890, 2310, 2385, 2895
BsaWI	WCCGGW	4 cut(s)	139, 830, 1289, 2884
BsaXI	ACNNNNNCTCC	7 cut(s)	28, 477, 507, 853, 883, 1381, 1411
Bsc4I	CCNNNNNNNGG	4 cut(s)	369, 592, 1448, 2803
Bse118I	RCCGGY	1 cut(s)	830
Bse1I	ACTGG	8 cut(s)	280, 1403, 1585, 2176, 2526, 2538, 2554, 2849
Bse21I	CCTNAGG	1 cut(s)	1708
Bse3DI	GCAATG	2 cut(s)	2475, 3335
BseBI	CCWGG	3 cut(s)	108, 587, 2912
BseDI	CCNNGG	7 cut(s)	363, 675, 1354, 1890, 2310, 2385, 2895
BseLI	CCNNNNNNNGG	4 cut(s)	369, 592, 1448, 2803
BseMI	GCAATG	2 cut(s)	2475, 3335
BseMII	CTCAG	6 cut(s)	467, 790, 1593, 1722, 1916, 3366
BseNI	ACTGG	8 cut(s)	280, 1403, 1585, 2176, 2526, 2538, 2554, 2849
BseRI	GAGGAG	5 cut(s)	19, 22, 98, 285, 750
BseSI	GKGCMC	1 cut(s)	435
BseXI	GCAGC	7 cut(s)	18, 754, 1085, 1631, 1646, 2691, 3539
BseYI	CCCAGC	1 cut(s)	3098
BsgI	GTGCAG	3 cut(s)	1851, 2037, 2907
Bsh1236I	CGCG	1 cut(s)	353
BshFI	GGCC	7 cut(s)	106, 155, 287, 1260, 1353, 2000, 3496
BshNI	GGYRCC	2 cut(s)	1438, 2579
BshTI	ACCGGT	1 cut(s)	830
BsiHKAI	GWGCWC	1 cut(s)	435
BsiHKCI	CYCGRG	2 cut(s)	2432, 3458
BsiSI	CCGG	5 cut(s)	140, 156, 831, 1290, 2885
BslFI	GGGAC	1 cut(s)	3456
BslI	CCNNNNNNNGG	4 cut(s)	369, 592, 1448, 2803
BsmAI	GTCTC	9 cut(s)	569, 590, 774, 1611, 1880, 2169, 2265, 2421, 2939
BsmFI	GGGAC	1 cut(s)	3456
BsmI	GAATGC	3 cut(s)	88, 2601, 2649
BsnI	GGCC	7 cut(s)	106, 155, 287, 1260, 1353, 2000, 3496
Bso31I	GGTCTC	1 cut(s)	1880
BsoBI	CYCGRG	2 cut(s)	2432, 3458
Bsp119I	TTCGAA	3 cut(s)	163, 1653, 1878
Bsp1286I	GDGCHC	2 cut(s)	435, 2384
Bsp1407I	TGTACA	2 cut(s)	1731, 3126
Bsp19I	CCATGG	2 cut(s)	675, 2895
BspACI	CCGC	4 cut(s)	1531, 1774, 2651, 3394
BspANI	GGCC	7 cut(s)	106, 155, 287, 1260, 1353, 2000, 3496
BspCNI	CTCAG	6 cut(s)	468, 789, 1594, 1721, 1917, 3365
BspFNI	CGCG	1 cut(s)	353
BspHI	TCATGA	2 cut(s)	1005, 1408
BspLI	GGNNCC	9 cut(s)	303, 693, 958, 1440, 2118, 2383, 2581, 3214, 3253
BspPI	GGATC	8 cut(s)	380, 951, 964, 1010, 1046, 1481, 2744, 3449
BspQI	GCTCTTC	1 cut(s)	61
BspT104I	TTCGAA	3 cut(s)	163, 1653, 1878
BspT107I	GGYRCC	2 cut(s)	1438, 2579
BspTNI	GGTCTC	1 cut(s)	1880
BsrDI	GCAATG	2 cut(s)	2475, 3335
BsrFI	RCCGGY	1 cut(s)	830
BsrGI	TGTACA	2 cut(s)	1731, 3126
BsrI	ACTGG	8 cut(s)	280, 1403, 1585, 2176, 2526, 2538, 2554, 2849
BssAI	RCCGGY	1 cut(s)	830
BssECI	CCNNGG	7 cut(s)	363, 675, 1354, 1890, 2310, 2385, 2895
BssNAI	GTATAC	2 cut(s)	201, 2836
BssNI	GRCGYC	1 cut(s)	385
BssT1I	CCWWGG	5 cut(s)	363, 675, 1890, 2310, 2895
Bst1107I	GTATAC	2 cut(s)	201, 2836
Bst2UI	CCWGG	3 cut(s)	108, 587, 2912
Bst4CI	ACNGT	8 cut(s)	205, 1042, 2024, 2859, 3139, 3447, 3505, 3522
Bst6I	CTCTTC	3 cut(s)	61, 1743, 1878
BstACI	GRCGYC	1 cut(s)	385
BstAUI	TGTACA	2 cut(s)	1731, 3126
BstBI	TTCGAA	3 cut(s)	163, 1653, 1878
BstC8I	GCNNGC	6 cut(s)	1857, 2139, 2466, 2649, 2702, 2987
BstDEI	CTNAG	8 cut(s)	476, 776, 1602, 1708, 1925, 2222, 3352, 3548
BstDSI	CCRYGG	3 cut(s)	675, 1354, 2895
BstENI	CCTNNNNNAGG	1 cut(s)	2801
BstFNI	CGCG	1 cut(s)	353
BstH2I	RGCGCY	3 cut(s)	2701, 3030, 3062
BstHHI	GCGC	5 cut(s)	353, 2398, 2700, 3029, 3061
BstMAI	GTCTC	9 cut(s)	569, 590, 774, 1611, 1880, 2169, 2265, 2421, 2939
BstMWI	GCNNNNNNNGC	7 cut(s)	320, 1070, 1343, 2321, 2704, 3251, 3524
BstNI	CCWGG	3 cut(s)	108, 587, 2912
BstNSI	RCATGY	4 cut(s)	1198, 1229, 1305, 3135
BstSCI	CCNGG	4 cut(s)	106, 155, 585, 2910
BstSFI	CTRYAG	2 cut(s)	1038, 2212
BstSLI	GKGCMC	1 cut(s)	435
BstUI	CGCG	1 cut(s)	353
BstV1I	GCAGC	7 cut(s)	18, 754, 1085, 1631, 1646, 2691, 3539
BstV2I	GAAGAC	1 cut(s)	3283
BstX2I	RGATCY	7 cut(s)	45, 526, 956, 1510, 2065, 2736, 3485
BstXI	CCANNNNNNTGG	1 cut(s)	2590
BstYI	RGATCY	7 cut(s)	45, 526, 956, 1510, 2065, 2736, 3485
BstZ17I	GTATAC	2 cut(s)	201, 2836
Bsu36I	CCTNAGG	1 cut(s)	1708
BsuI	GTATCC	1 cut(s)	759
BsuRI	GGCC	7 cut(s)	106, 155, 287, 1260, 1353, 2000, 3496
BtgI	CCRYGG	3 cut(s)	675, 1354, 2895
BtsIMutI	CAGTG	6 cut(s)	273, 325, 1338, 1692, 2519, 2855
Cac8I	GCNNGC	6 cut(s)	1857, 2139, 2466, 2649, 2702, 2987
CaiI	CAGNNNCTG	1 cut(s)	1337
CciI	TCATGA	2 cut(s)	1005, 1408
CfoI	GCGC	5 cut(s)	353, 2398, 2700, 3029, 3061
Cfr10I	RCCGGY	1 cut(s)	830
Cfr13I	GGNCC	2 cut(s)	104, 691
CseI	GACGC	4 cut(s)	374, 1678, 1925, 2245
Csp6I	GTAC	8 cut(s)	709, 1198, 1233, 1594, 1732, 3127, 3409, 3436
CspAI	ACCGGT	1 cut(s)	830
CspCI	CAANNNNNGTGG	2 cut(s)	424, 459
CviQI	GTAC	8 cut(s)	709, 1198, 1233, 1594, 1732, 3127, 3409, 3436
DdeI	CTNAG	8 cut(s)	476, 776, 1602, 1708, 1925, 2222, 3352, 3548
DraI	TTTAAA	2 cut(s)	1462, 1902
EaeI	YGGCCR	2 cut(s)	1258, 1351
Eam1104I	CTCTTC	3 cut(s)	61, 1743, 1878
EarI	CTCTTC	3 cut(s)	61, 1743, 1878
Eco130I	CCWWGG	5 cut(s)	363, 675, 1890, 2310, 2895
Eco24I	GRGCYC	1 cut(s)	2384
Eco31I	GGTCTC	1 cut(s)	1880
Eco47I	GGWCC	1 cut(s)	691
Eco47III	AGCGCT	2 cut(s)	3028, 3060
Eco57I	CTGAAG	3 cut(s)	1043, 1148, 1940
Eco81I	CCTNAGG	1 cut(s)	1708
Eco88I	CYCGRG	2 cut(s)	2432, 3458
EcoNI	CCTNNNNNAGG	1 cut(s)	2801
EcoO109I	RGGNCCY	1 cut(s)	691
EcoRI	GAATTC	2 cut(s)	512, 1655
EcoRII	CCWGG	3 cut(s)	106, 585, 2910
EcoT14I	CCWWGG	5 cut(s)	363, 675, 1890, 2310, 2895
EcoT38I	GRGCYC	1 cut(s)	2384
ErhI	CCWWGG	5 cut(s)	363, 675, 1890, 2310, 2895
FalI	AAGNNNNNCTT	2 cut(s)	58, 90
FaqI	GGGAC	1 cut(s)	3456
FauNDI	CATATG	1 cut(s)	3247
FbaI	TGATCA	4 cut(s)	336, 1992, 2400, 3033
FblI	GTMKAC	3 cut(s)	200, 1266, 2835
Fnu4HI	GCNGC	7 cut(s)	32, 743, 1074, 1620, 1635, 2705, 3528
FriOI	GRGCYC	1 cut(s)	2384
Fsp4HI	GCNGC	7 cut(s)	32, 743, 1074, 1620, 1635, 2705, 3528
FspBI	CTAG	5 cut(s)	546, 2459, 2529, 3113, 3531
GlaI	GCGC	5 cut(s)	352, 2397, 2699, 3028, 3060
GluI	GCNGC	7 cut(s)	32, 743, 1074, 1620, 1635, 2705, 3528
GsaI	CCCAGC	1 cut(s)	3102
GsuI	CTGGAG	2 cut(s)	2193, 2247
HaeII	RGCGCY	3 cut(s)	2701, 3030, 3062
HaeIII	GGCC	7 cut(s)	106, 155, 287, 1260, 1353, 2000, 3496
HapII	CCGG	5 cut(s)	140, 156, 831, 1290, 2885
HgaI	GACGC	4 cut(s)	374, 1678, 1925, 2245
HhaI	GCGC	5 cut(s)	353, 2398, 2700, 3029, 3061
Hin1I	GRCGYC	1 cut(s)	385
Hin6I	GCGC	5 cut(s)	351, 2396, 2698, 3027, 3059
HinP1I	GCGC	5 cut(s)	351, 2396, 2698, 3027, 3059
HindIII	AAGCTT	1 cut(s)	2135
HpaII	CCGG	5 cut(s)	140, 156, 831, 1290, 2885
HphI	GGTGA	8 cut(s)	691, 820, 1392, 2299, 2496, 2585, 3175, 3252
Hpy99I	CGWCG	3 cut(s)	358, 390, 3509
HpyCH4III	ACNGT	8 cut(s)	205, 1042, 2024, 2859, 3139, 3447, 3505, 3522
HpyF10VI	GCNNNNNNNGC	7 cut(s)	320, 1070, 1343, 2321, 2704, 3251, 3524
HpyF3I	CTNAG	8 cut(s)	476, 776, 1602, 1708, 1925, 2222, 3352, 3548
Hsp92I	GRCGYC	1 cut(s)	385
HspAI	GCGC	5 cut(s)	351, 2396, 2698, 3027, 3059
Ksp22I	TGATCA	4 cut(s)	336, 1992, 2400, 3033
LguI	GCTCTTC	1 cut(s)	61
LmnI	GCTCC	9 cut(s)	85, 307, 1069, 1894, 2387, 2604, 2695, 3116, 3251
Lsp1109I	GCAGC	7 cut(s)	18, 754, 1085, 1631, 1646, 2691, 3539
LweI	GCATC	8 cut(s)	547, 666, 2290, 2324, 2378, 2489, 2816, 3381
MaeI	CTAG	5 cut(s)	546, 2459, 2529, 3113, 3531
MfeI	CAATTG	1 cut(s)	2568
MflI	RGATCY	7 cut(s)	45, 526, 956, 1510, 2065, 2736, 3485
MhlI	GDGCHC	2 cut(s)	435, 2384
MlsI	TGGCCA	1 cut(s)	1260
MluNI	TGGCCA	1 cut(s)	1260
MlyI	GAGTC	4 cut(s)	776, 1613, 2267, 2337
MmeI	TCCRAC	5 cut(s)	545, 700, 934, 1677, 2984
Mox20I	TGGCCA	1 cut(s)	1260
MroXI	GAANNNNTTC	4 cut(s)	70, 516, 1396, 1526
MscI	TGGCCA	1 cut(s)	1260
MslI	CAYNNNNRTG	2 cut(s)	1685, 1902
Msp20I	TGGCCA	1 cut(s)	1260
MspA1I	CMGCKG	4 cut(s)	60, 314, 2090, 2985
MspI	CCGG	5 cut(s)	140, 156, 831, 1290, 2885
MspR9I	CCNGG	4 cut(s)	108, 157, 587, 2912
MunI	CAATTG	1 cut(s)	2568
Mva1269I	GAATGC	3 cut(s)	88, 2601, 2649
MvaI	CCWGG	3 cut(s)	108, 587, 2912
MvnI	CGCG	1 cut(s)	353
MwoI	GCNNNNNNNGC	7 cut(s)	320, 1070, 1343, 2321, 2704, 3251, 3524
NciI	CCSGG	1 cut(s)	157
NcoI	CCATGG	2 cut(s)	675, 2895
NdeI	CATATG	1 cut(s)	3247
NlaIV	GGNNCC	9 cut(s)	303, 693, 958, 1440, 2118, 2383, 2581, 3214, 3253
NmuCI	GTSAC	4 cut(s)	271, 2524, 2853, 3258
NspI	RCATGY	4 cut(s)	1198, 1229, 1305, 3135
NspV	TTCGAA	3 cut(s)	163, 1653, 1878
PaeR7I	CTCGAG	1 cut(s)	2432
PagI	TCATGA	2 cut(s)	1005, 1408
PciI	ACATGT	1 cut(s)	1194
PciSI	GCTCTTC	1 cut(s)	61
PctI	GAATGC	3 cut(s)	88, 2601, 2649
PdmI	GAANNNNTTC	4 cut(s)	70, 516, 1396, 1526
PfeI	GAWTC	7 cut(s)	143, 160, 279, 472, 1034, 1936, 2151
PflFI	GACNNNGTC	1 cut(s)	1838
PinAI	ACCGGT	1 cut(s)	830
PkrI	GCNGC	7 cut(s)	33, 744, 1075, 1621, 1636, 2706, 3529
PleI	GAGTC	4 cut(s)	776, 1612, 2266, 2336
PpsI	GAGTC	4 cut(s)	776, 1612, 2266, 2336
PpuMI	RGGWCCY	1 cut(s)	691
PscI	ACATGT	1 cut(s)	1194
Psp5II	RGGWCCY	1 cut(s)	691
Psp6I	CCWGG	3 cut(s)	106, 585, 2910
PspFI	CCCAGC	1 cut(s)	3098
PspGI	CCWGG	3 cut(s)	106, 585, 2910
PspN4I	GGNNCC	9 cut(s)	303, 693, 958, 1440, 2118, 2383, 2581, 3214, 3253
PspPI	GGNCC	2 cut(s)	104, 691
PspPPI	RGGWCCY	1 cut(s)	691
PstNI	CAGNNNCTG	1 cut(s)	1337
PsuI	RGATCY	7 cut(s)	45, 526, 956, 1510, 2065, 2736, 3485
PsyI	GACNNNGTC	1 cut(s)	1838
PvuII	CAGCTG	4 cut(s)	60, 314, 2090, 2985
RsaI	GTAC	8 cut(s)	710, 1199, 1234, 1595, 1733, 3128, 3410, 3437
RsaNI	GTAC	8 cut(s)	709, 1198, 1233, 1594, 1732, 3127, 3409, 3436
RseI	CAYNNNNRTG	2 cut(s)	1685, 1902
SapI	GCTCTTC	1 cut(s)	61
SatI	GCNGC	7 cut(s)	32, 743, 1074, 1620, 1635, 2705, 3528
Sau96I	GGNCC	2 cut(s)	104, 691
SchI	GAGTC	4 cut(s)	776, 1613, 2267, 2337
ScrFI	CCNGG	4 cut(s)	108, 157, 587, 2912
SduI	GDGCHC	2 cut(s)	435, 2384
SfaNI	GCATC	8 cut(s)	547, 666, 2290, 2324, 2378, 2489, 2816, 3381
SfcI	CTRYAG	2 cut(s)	1038, 2212
Sfr274I	CTCGAG	1 cut(s)	2432
SfuI	TTCGAA	3 cut(s)	163, 1653, 1878
SgrAI	CRCCGGYG	1 cut(s)	830
SinI	GGWCC	1 cut(s)	691
SlaI	CTCGAG	1 cut(s)	2432
SmiI	ATTTAAAT	1 cut(s)	1902
SmiMI	CAYNNNNRTG	2 cut(s)	1685, 1902
SmlI	CTYRAG	2 cut(s)	2432, 2936
SmoI	CTYRAG	2 cut(s)	2432, 2936
SsiI	CCGC	4 cut(s)	1531, 1774, 2651, 3394
SspMI	CTAG	5 cut(s)	546, 2459, 2529, 3113, 3531
StyD4I	CCNGG	4 cut(s)	106, 155, 585, 2910
StyI	CCWWGG	5 cut(s)	363, 675, 1890, 2310, 2895
SwaI	ATTTAAAT	1 cut(s)	1902
TaaI	ACNGT	8 cut(s)	205, 1042, 2024, 2859, 3139, 3447, 3505, 3522
TaqI	TCGA	9 cut(s)	163, 375, 388, 1371, 1653, 1878, 2433, 2637, 2907
TatI	WGTACW	4 cut(s)	708, 1197, 1731, 3126
TfiI	GAWTC	7 cut(s)	143, 160, 279, 472, 1034, 1936, 2151
TscAI	CASTG	6 cut(s)	280, 325, 1338, 1692, 2526, 2862
TseFI	GTSAC	4 cut(s)	271, 2524, 2853, 3258
TseI	GCWGC	7 cut(s)	31, 742, 1073, 1619, 1634, 2704, 3527
Tsp45I	GTSAC	4 cut(s)	271, 2524, 2853, 3258
TspGWI	ACGGA	1 cut(s)	828
TspRI	CASTG	6 cut(s)	280, 325, 1338, 1692, 2526, 2862
Tth111I	GACNNNGTC	1 cut(s)	1838
VneI	GTGCAC	1 cut(s)	431
VpaK11BI	GGWCC	1 cut(s)	691
XagI	CCTNNNNNAGG	1 cut(s)	2801
XapI	RAATTY	5 cut(s)	512, 703, 1523, 1655, 2251
XbaI	TCTAGA	1 cut(s)	2458
XceI	RCATGY	4 cut(s)	1198, 1229, 1305, 3135
XhoI	CTCGAG	1 cut(s)	2432
XmiI	GTMKAC	3 cut(s)	200, 1266, 2835
XmnI	GAANNNNTTC	4 cut(s)	70, 516, 1396, 1526
XspI	CTAG	5 cut(s)	546, 2459, 2529, 3113, 3531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.