Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G13210 AT1G26130 AT1G26130 AT1G26130 AT1G26130 AT1G68710 AT1G68710 AT1G68710 AT3G25610 |
| fragaria_vesca | FvH4_4g28450 FvH4_5g12920 FvH4_5g12920 |
| malus_domestica | MD06G1209100.v1.1 MD13G1050400.v1.1 MD14G1219500.v1.1 MD16G1051100.v1.1 |
| prunus_persica | Prupe.1G301500_v2.0.a1 Prupe.5G214200_v2.0.a1 |
| pyrus_communis | pycom06g18670 pycom14g18190 pycom16g04490 |
| rosa_chinensis | RchiOBHm_Chr4g0436411 RchiOBHm_Chr7g0184301 |
| rosa_laevigata | RLG00000004988 RLG00000006521 |
| rosa_multiflora | Rmu_sc0000579.1_g000001 Rmu_sc0013812.1_g000007 |
| rosa_roxburghii | Rroxscaffold_3G00269750 Rroxscaffold_5G00377570 |
| rosa_rugosa | Rorug04G0293600 |
| rosa_samantha | Rh4AG348000 Rh4CG371300 Rh7AG081300 Rh7CG066300 Rh7DG065900 |
| rosa_wichuraiana | Rw4G030420 Rw7G005410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1175, 1749 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2933 |
| Acc16I | TGCGCA | 3 cut(s) | 2497, 2985, 3325 |
| Acc65I | GGTACC | 1 cut(s) | 1014 |
| AccB1I | GGYRCC | 3 cut(s) | 1014, 1060, 3134 |
| AccI | GTMKAC | 2 cut(s) | 197, 1454 |
| AccII | CGCG | 4 cut(s) | 1228, 1353, 1521, 1965 |
| AccIII | TCCGGA | 1 cut(s) | 3009 |
| AclWI | GGATC | 7 cut(s) | 857, 1043, 1111, 1411, 1709, 1722, 3498 |
| AcoI | YGGCCR | 4 cut(s) | 1255, 2583, 2734, 2940 |
| AcsI | RAATTY | 7 cut(s) | 661, 700, 853, 1313, 1670, 2003, 2428 |
| AcuI | CTGAAG | 3 cut(s) | 1145, 1446, 1599 |
| AcvI | CACGTG | 1 cut(s) | 59 |
| AfaI | GTAC | 9 cut(s) | 707, 746, 1016, 1231, 1953, 2730, 2855, 2972, 3146 |
| AfeI | AGCGCT | 1 cut(s) | 558 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 465, 1383, 1724, 2710 |
| AflIII | ACRYGT | 1 cut(s) | 1191 |
| AhlI | ACTAGT | 1 cut(s) | 977 |
| AjnI | CCWGG | 5 cut(s) | 103, 168, 987, 1179, 1382 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 245, 277 |
| Alw21I | GWGCWC | 1 cut(s) | 1191 |
| Alw26I | GTCTC | 9 cut(s) | 566, 620, 771, 2195, 2267, 2526, 2941, 2957, 3373 |
| Alw44I | GTGCAC | 1 cut(s) | 1187 |
| AlwI | GGATC | 7 cut(s) | 857, 1043, 1111, 1411, 1709, 1722, 3498 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 769, 2407 |
| Ama87I | CYCGRG | 4 cut(s) | 112, 1221, 2839, 3476 |
| Aor13HI | TCCGGA | 1 cut(s) | 3009 |
| Aor51HI | AGCGCT | 1 cut(s) | 558 |
| AoxI | GGCC | 9 cut(s) | 100, 150, 366, 1255, 2013, 2583, 2734, 2842, 2940 |
| ApaLI | GTGCAC | 1 cut(s) | 1187 |
| ApeKI | GCWGC | 9 cut(s) | 28, 763, 787, 1070, 1634, 1649, 2381, 2493, 3398 |
| ApoI | RAATTY | 7 cut(s) | 661, 700, 853, 1313, 1670, 2003, 2428 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 638, 670 |
| AseI | ATTAAT | 1 cut(s) | 2211 |
| Asp718I | GGTACC | 1 cut(s) | 1014 |
| AspLEI | GCGC | 9 cut(s) | 559, 1228, 1353, 1523, 1847, 2498, 2718, 2986, 3326 |
| AspS9I | GGNCC | 2 cut(s) | 101, 2842 |
| AsuHPI | GGTGA | 7 cut(s) | 449, 1406, 1614, 2038, 2603, 2917, 3052 |
| AsuII | TTCGAA | 1 cut(s) | 1863 |
| AvaI | CYCGRG | 4 cut(s) | 112, 1221, 2839, 3476 |
| BaeGI | GKGCMC | 2 cut(s) | 1063, 1191 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 828, 861, 1023, 1056 |
| BalI | TGGCCA | 2 cut(s) | 1257, 2736 |
| BamHI | GGATCC | 1 cut(s) | 1714 |
| BanI | GGYRCC | 3 cut(s) | 1014, 1060, 3134 |
| BbrPI | CACGTG | 1 cut(s) | 59 |
| BbsI | GAAGAC | 7 cut(s) | 651, 693, 955, 1907, 2118, 2878, 3049 |
| Bbv12I | GWGCWC | 1 cut(s) | 1191 |
| BbvI | GCAGC | 9 cut(s) | 40, 774, 775, 1082, 1646, 1661, 2368, 2480, 3410 |
| BceAI | ACGGC | 4 cut(s) | 296, 353, 2331, 2570 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 20, 54, 1853, 1887 |
| BciT130I | CCWGG | 5 cut(s) | 105, 170, 989, 1181, 1384 |
| BciVI | GTATCC | 1 cut(s) | 3006 |
| BclI | TGATCA | 3 cut(s) | 1005, 1800, 2415 |
| BcoDI | GTCTC | 9 cut(s) | 566, 620, 771, 2195, 2267, 2526, 2941, 2957, 3373 |
| BcuI | ACTAGT | 1 cut(s) | 977 |
| BfaI | CTAG | 5 cut(s) | 978, 1553, 1905, 2477, 3053 |
| BfmI | CTRYAG | 3 cut(s) | 1544, 2103, 2277 |
| BfoI | RGCGCY | 3 cut(s) | 560, 1848, 2719 |
| BfuI | GTATCC | 1 cut(s) | 3006 |
| Bme1390I | CCNGG | 5 cut(s) | 105, 170, 989, 1181, 1384 |
| BmeT110I | CYCGRG | 4 cut(s) | 112, 1221, 2839, 3476 |
| BmgT120I | GGNCC | 2 cut(s) | 101, 2842 |
| BmiI | GGNNCC | 8 cut(s) | 1016, 1062, 1447, 1716, 2133, 3008, 3136, 3271 |
| BmrFI | CCNGG | 5 cut(s) | 105, 170, 989, 1181, 1384 |
| BmsI | GCATC | 4 cut(s) | 439, 1704, 2507, 3243 |
| BpiI | GAAGAC | 7 cut(s) | 651, 693, 955, 1907, 2118, 2878, 3049 |
| BpmI | CTGGAG | 1 cut(s) | 2208 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1378, 2157 |
| Bpu14I | TTCGAA | 1 cut(s) | 1863 |
| BpuEI | CTTGAG | 4 cut(s) | 634, 1671, 1765, 2939 |
| Bsa29I | ATCGAT | 1 cut(s) | 2466 |
| BsaAI | YACGTR | 1 cut(s) | 59 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2865 |
| BsaI | GGTCTC | 2 cut(s) | 566, 3373 |
| BsaJI | CCNNGG | 6 cut(s) | 103, 169, 219, 2022, 2325, 2913 |
| BsaWI | WCCGGW | 3 cut(s) | 1286, 2902, 3009 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 850, 880, 1378, 1408 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 465, 1383, 1724, 2710 |
| Bse1I | ACTGG | 7 cut(s) | 624, 1600, 2191, 2412, 2556, 2572, 3256 |
| Bse3DI | GCAATG | 4 cut(s) | 2685, 2790, 3033, 3084 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2865 |
| BseAI | TCCGGA | 1 cut(s) | 3009 |
| BseBI | CCWGG | 5 cut(s) | 105, 170, 989, 1181, 1384 |
| BseCI | ATCGAT | 1 cut(s) | 2466 |
| BseDI | CCNNGG | 6 cut(s) | 103, 169, 219, 2022, 2325, 2913 |
| BseGI | GGATG | 6 cut(s) | 903, 997, 1189, 1486, 3026, 3402 |
| BseJI | GATNNNNATC | 1 cut(s) | 2865 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 465, 1383, 1724, 2710 |
| BseMI | GCAATG | 4 cut(s) | 2685, 2790, 3033, 3084 |
| BseMII | CTCAG | 5 cut(s) | 129, 1033, 2001, 2171, 2414 |
| BseNI | ACTGG | 7 cut(s) | 624, 1600, 2191, 2412, 2556, 2572, 3256 |
| BseRI | GAGGAG | 1 cut(s) | 397 |
| BseSI | GKGCMC | 2 cut(s) | 1063, 1191 |
| BseXI | GCAGC | 9 cut(s) | 40, 774, 775, 1082, 1646, 1661, 2368, 2480, 3410 |
| BsgI | GTGCAG | 3 cut(s) | 623, 2248, 2367 |
| Bsh1236I | CGCG | 4 cut(s) | 1228, 1353, 1521, 1965 |
| BshFI | GGCC | 9 cut(s) | 102, 152, 368, 1257, 2015, 2585, 2736, 2844, 2942 |
| BshNI | GGYRCC | 3 cut(s) | 1014, 1060, 3134 |
| BshVI | ATCGAT | 1 cut(s) | 2466 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1191 |
| BsiHKCI | CYCGRG | 4 cut(s) | 112, 1221, 2839, 3476 |
| BsiSI | CCGG | 3 cut(s) | 1287, 2903, 3010 |
| BslFI | GGGAC | 1 cut(s) | 311 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 465, 1383, 1724, 2710 |
| BsmAI | GTCTC | 9 cut(s) | 566, 620, 771, 2195, 2267, 2526, 2941, 2957, 3373 |
| BsmBI | CGTCTC | 1 cut(s) | 2526 |
| BsmFI | GGGAC | 1 cut(s) | 311 |
| BsmI | GAATGC | 4 cut(s) | 85, 2144, 2619, 2667 |
| BsnI | GGCC | 9 cut(s) | 102, 152, 368, 1257, 2015, 2585, 2736, 2844, 2942 |
| Bso31I | GGTCTC | 2 cut(s) | 566, 3373 |
| BsoBI | CYCGRG | 4 cut(s) | 112, 1221, 2839, 3476 |
| Bsp119I | TTCGAA | 1 cut(s) | 1863 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1063, 1191 |
| Bsp13I | TCCGGA | 1 cut(s) | 3009 |
| Bsp1407I | TGTACA | 1 cut(s) | 2728 |
| Bsp68I | TCGCGA | 1 cut(s) | 1965 |
| BspANI | GGCC | 9 cut(s) | 102, 152, 368, 1257, 2015, 2585, 2736, 2844, 2942 |
| BspCNI | CTCAG | 5 cut(s) | 130, 1032, 2002, 2170, 2413 |
| BspDI | ATCGAT | 1 cut(s) | 2466 |
| BspEI | TCCGGA | 1 cut(s) | 3009 |
| BspFNI | CGCG | 4 cut(s) | 1228, 1353, 1521, 1965 |
| BspLI | GGNNCC | 8 cut(s) | 1016, 1062, 1447, 1716, 2133, 3008, 3136, 3271 |
| BspMAI | CTGCAG | 2 cut(s) | 2107, 2281 |
| BspPI | GGATC | 7 cut(s) | 857, 1043, 1111, 1411, 1709, 1722, 3498 |
| BspT104I | TTCGAA | 1 cut(s) | 1863 |
| BspT107I | GGYRCC | 3 cut(s) | 1014, 1060, 3134 |
| BspTNI | GGTCTC | 2 cut(s) | 566, 3373 |
| BsrDI | GCAATG | 4 cut(s) | 2685, 2790, 3033, 3084 |
| BsrGI | TGTACA | 1 cut(s) | 2728 |
| BsrI | ACTGG | 7 cut(s) | 624, 1600, 2191, 2412, 2556, 2572, 3256 |
| BssECI | CCNNGG | 6 cut(s) | 103, 169, 219, 2022, 2325, 2913 |
| BssNAI | GTATAC | 1 cut(s) | 198 |
| BssT1I | CCWWGG | 4 cut(s) | 219, 2022, 2325, 2913 |
| Bst1107I | GTATAC | 1 cut(s) | 198 |
| Bst2UI | CCWGG | 5 cut(s) | 105, 170, 989, 1181, 1384 |
| Bst6I | CTCTTC | 8 cut(s) | 618, 1407, 1594, 1809, 1890, 2385, 3224, 3376 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 769, 1067, 2543 |
| BstAUI | TGTACA | 1 cut(s) | 2728 |
| BstBAI | YACGTR | 1 cut(s) | 59 |
| BstBI | TTCGAA | 1 cut(s) | 1863 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1381 |
| BstF5I | GGATG | 6 cut(s) | 903, 997, 1189, 1486, 3026, 3402 |
| BstFNI | CGCG | 4 cut(s) | 1228, 1353, 1521, 1965 |
| BstH2I | RGCGCY | 3 cut(s) | 560, 1848, 2719 |
| BstHHI | GCGC | 9 cut(s) | 559, 1228, 1353, 1523, 1847, 2498, 2718, 2986, 3326 |
| BstMAI | GTCTC | 9 cut(s) | 566, 620, 771, 2195, 2267, 2526, 2941, 2957, 3373 |
| BstNI | CCWGG | 5 cut(s) | 105, 170, 989, 1181, 1384 |
| BstNSI | RCATGY | 1 cut(s) | 1195 |
| BstSCI | CCNGG | 5 cut(s) | 103, 168, 987, 1179, 1382 |
| BstSFI | CTRYAG | 3 cut(s) | 1544, 2103, 2277 |
| BstSLI | GKGCMC | 2 cut(s) | 1063, 1191 |
| BstUI | CGCG | 4 cut(s) | 1228, 1353, 1521, 1965 |
| BstV1I | GCAGC | 9 cut(s) | 40, 774, 775, 1082, 1646, 1661, 2368, 2480, 3410 |
| BstV2I | GAAGAC | 7 cut(s) | 651, 693, 955, 1907, 2118, 2878, 3049 |
| BstX2I | RGATCY | 4 cut(s) | 862, 1416, 1714, 3503 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2023 |
| BstYI | RGATCY | 4 cut(s) | 862, 1416, 1714, 3503 |
| BstZ17I | GTATAC | 1 cut(s) | 198 |
| Bsu15I | ATCGAT | 1 cut(s) | 2466 |
| BsuI | GTATCC | 1 cut(s) | 3006 |
| BsuRI | GGCC | 9 cut(s) | 102, 152, 368, 1257, 2015, 2585, 2736, 2844, 2942 |
| BsuTUI | ATCGAT | 1 cut(s) | 2466 |
| BtsCI | GGATG | 6 cut(s) | 903, 997, 1189, 1486, 3026, 3402 |
| BtsI | GCAGTG | 4 cut(s) | 231, 1338, 1700, 3294 |
| BtuMI | TCGCGA | 1 cut(s) | 1965 |
| CaiI | CAGNNNCTG | 2 cut(s) | 769, 2407 |
| CfoI | GCGC | 9 cut(s) | 559, 1228, 1353, 1523, 1847, 2498, 2718, 2986, 3326 |
| Cfr13I | GGNCC | 2 cut(s) | 101, 2842 |
| ClaI | ATCGAT | 1 cut(s) | 2466 |
| CseI | GACGC | 1 cut(s) | 1940 |
| Csp6I | GTAC | 9 cut(s) | 706, 745, 1015, 1230, 1952, 2729, 2854, 2971, 3145 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 565, 600 |
| CviQI | GTAC | 9 cut(s) | 706, 745, 1015, 1230, 1952, 2729, 2854, 2971, 3145 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2933 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2933 |
| EaeI | YGGCCR | 4 cut(s) | 1255, 2583, 2734, 2940 |
| Eam1104I | CTCTTC | 8 cut(s) | 618, 1407, 1594, 1809, 1890, 2385, 3224, 3376 |
| EarI | CTCTTC | 8 cut(s) | 618, 1407, 1594, 1809, 1890, 2385, 3224, 3376 |
| EciI | GGCGGA | 1 cut(s) | 298 |
| Eco130I | CCWWGG | 4 cut(s) | 219, 2022, 2325, 2913 |
| Eco31I | GGTCTC | 2 cut(s) | 566, 3373 |
| Eco32I | GATATC | 1 cut(s) | 2632 |
| Eco47III | AGCGCT | 1 cut(s) | 558 |
| Eco57I | CTGAAG | 3 cut(s) | 1145, 1446, 1599 |
| Eco72I | CACGTG | 1 cut(s) | 59 |
| Eco88I | CYCGRG | 4 cut(s) | 112, 1221, 2839, 3476 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1381 |
| EcoRI | GAATTC | 3 cut(s) | 853, 2003, 2428 |
| EcoRII | CCWGG | 5 cut(s) | 103, 168, 987, 1179, 1382 |
| EcoRV | GATATC | 1 cut(s) | 2632 |
| EcoT14I | CCWWGG | 4 cut(s) | 219, 2022, 2325, 2913 |
| EcoT22I | ATGCAT | 1 cut(s) | 2144 |
| ErhI | CCWWGG | 4 cut(s) | 219, 2022, 2325, 2913 |
| Esp3I | CGTCTC | 1 cut(s) | 2526 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2103, 2135 |
| FaqI | GGGAC | 1 cut(s) | 311 |
| FauI | CCCGC | 3 cut(s) | 2970, 3098, 3545 |
| FauNDI | CATATG | 2 cut(s) | 1609, 3265 |
| FbaI | TGATCA | 3 cut(s) | 1005, 1800, 2415 |
| FblI | GTMKAC | 2 cut(s) | 197, 1454 |
| FokI | GGATG | 6 cut(s) | 910, 1004, 1196, 1493, 3033, 3389 |
| FspBI | CTAG | 5 cut(s) | 978, 1553, 1905, 2477, 3053 |
| FspI | TGCGCA | 3 cut(s) | 2497, 2985, 3325 |
| GlaI | GCGC | 9 cut(s) | 558, 1227, 1352, 1522, 1846, 2497, 2717, 2985, 3325 |
| GsuI | CTGGAG | 1 cut(s) | 2208 |
| HaeII | RGCGCY | 3 cut(s) | 560, 1848, 2719 |
| HaeIII | GGCC | 9 cut(s) | 102, 152, 368, 1257, 2015, 2585, 2736, 2844, 2942 |
| HapII | CCGG | 3 cut(s) | 1287, 2903, 3010 |
| HgaI | GACGC | 1 cut(s) | 1940 |
| HhaI | GCGC | 9 cut(s) | 559, 1228, 1353, 1523, 1847, 2498, 2718, 2986, 3326 |
| Hin6I | GCGC | 9 cut(s) | 557, 1226, 1351, 1521, 1845, 2496, 2716, 2984, 3324 |
| HinP1I | GCGC | 9 cut(s) | 557, 1226, 1351, 1521, 1845, 2496, 2716, 2984, 3324 |
| HincII | GTYRAC | 2 cut(s) | 1455, 3169 |
| HindII | GTYRAC | 2 cut(s) | 1455, 3169 |
| HindIII | AAGCTT | 3 cut(s) | 66, 652, 2150 |
| HinfI | GANTC | 7 cut(s) | 42, 647, 779, 1619, 1684, 2086, 2754 |
| HpaII | CCGG | 3 cut(s) | 1287, 2903, 3010 |
| HphI | GGTGA | 7 cut(s) | 449, 1406, 1614, 2038, 2603, 2917, 3052 |
| Hpy166II | GTNNAC | 7 cut(s) | 124, 198, 1042, 1167, 1189, 1455, 3169 |
| Hpy8I | GTNNAC | 7 cut(s) | 124, 198, 1042, 1167, 1189, 1455, 3169 |
| Hpy99I | CGWCG | 5 cut(s) | 326, 338, 341, 1057, 1459 |
| HpyCH4IV | ACGT | 3 cut(s) | 58, 321, 2991 |
| HpySE526I | ACGT | 3 cut(s) | 58, 321, 2991 |
| HspAI | GCGC | 9 cut(s) | 557, 1226, 1351, 1521, 1845, 2496, 2716, 2984, 3324 |
| Kpn2I | TCCGGA | 1 cut(s) | 3009 |
| KpnI | GGTACC | 1 cut(s) | 1018 |
| Ksp22I | TGATCA | 3 cut(s) | 1005, 1800, 2415 |
| LmnI | GCTCC | 6 cut(s) | 1445, 2273, 2713, 3012, 3269, 3337 |
| Lsp1109I | GCAGC | 9 cut(s) | 40, 774, 775, 1082, 1646, 1661, 2368, 2480, 3410 |
| LweI | GCATC | 4 cut(s) | 439, 1704, 2507, 3243 |
| MaeI | CTAG | 5 cut(s) | 978, 1553, 1905, 2477, 3053 |
| MaeII | ACGT | 3 cut(s) | 58, 321, 2991 |
| MaeIII | GTNAC | 8 cut(s) | 349, 830, 1357, 1548, 2744, 2871, 3040, 3527 |
| MfeI | CAATTG | 1 cut(s) | 2691 |
| MflI | RGATCY | 4 cut(s) | 862, 1416, 1714, 3503 |
| MhlI | GDGCHC | 2 cut(s) | 1063, 1191 |
| MlsI | TGGCCA | 2 cut(s) | 1257, 2736 |
| MluNI | TGGCCA | 2 cut(s) | 1257, 2736 |
| MlyI | GAGTC | 3 cut(s) | 641, 773, 1678 |
| MmeI | TCCRAC | 3 cut(s) | 1076, 1692, 2590 |
| Mox20I | TGGCCA | 2 cut(s) | 1257, 2736 |
| Mph1103I | ATGCAT | 1 cut(s) | 2144 |
| MroI | TCCGGA | 1 cut(s) | 3009 |
| MscI | TGGCCA | 2 cut(s) | 1257, 2736 |
| MslI | CAYNNNNRTG | 3 cut(s) | 404, 435, 3407 |
| Msp20I | TGGCCA | 2 cut(s) | 1257, 2736 |
| MspA1I | CMGCKG | 1 cut(s) | 2649 |
| MspI | CCGG | 3 cut(s) | 1287, 2903, 3010 |
| MspR9I | CCNGG | 5 cut(s) | 105, 170, 989, 1181, 1384 |
| MunI | CAATTG | 1 cut(s) | 2691 |
| Mva1269I | GAATGC | 4 cut(s) | 85, 2144, 2619, 2667 |
| MvaI | CCWGG | 5 cut(s) | 105, 170, 989, 1181, 1384 |
| MvnI | CGCG | 4 cut(s) | 1228, 1353, 1521, 1965 |
| NdeI | CATATG | 2 cut(s) | 1609, 3265 |
| NlaIV | GGNNCC | 8 cut(s) | 1016, 1062, 1447, 1716, 2133, 3008, 3136, 3271 |
| NmeAIII | GCCGAG | 1 cut(s) | 2918 |
| NmuCI | GTSAC | 3 cut(s) | 830, 2871, 3040 |
| NruI | TCGCGA | 1 cut(s) | 1965 |
| NsbI | TGCGCA | 3 cut(s) | 2497, 2985, 3325 |
| NsiI | ATGCAT | 1 cut(s) | 2144 |
| NspI | RCATGY | 1 cut(s) | 1195 |
| NspV | TTCGAA | 1 cut(s) | 1863 |
| PaeR7I | CTCGAG | 1 cut(s) | 112 |
| PciI | ACATGT | 1 cut(s) | 1191 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 330 |
| PctI | GAATGC | 4 cut(s) | 85, 2144, 2619, 2667 |
| PfeI | GAWTC | 4 cut(s) | 42, 1619, 2086, 2754 |
| PflFI | GACNNNGTC | 1 cut(s) | 1853 |
| PleI | GAGTC | 3 cut(s) | 641, 773, 1678 |
| PmaCI | CACGTG | 1 cut(s) | 59 |
| PmlI | CACGTG | 1 cut(s) | 59 |
| PpsI | GAGTC | 3 cut(s) | 641, 773, 1678 |
| Ppu21I | YACGTR | 1 cut(s) | 59 |
| PscI | ACATGT | 1 cut(s) | 1191 |
| PshBI | ATTAAT | 1 cut(s) | 2211 |
| PsiI | TTATAA | 2 cut(s) | 1175, 1749 |
| Psp6I | CCWGG | 5 cut(s) | 103, 168, 987, 1179, 1382 |
| PspCI | CACGTG | 1 cut(s) | 59 |
| PspGI | CCWGG | 5 cut(s) | 103, 168, 987, 1179, 1382 |
| PspN4I | GGNNCC | 8 cut(s) | 1016, 1062, 1447, 1716, 2133, 3008, 3136, 3271 |
| PspPI | GGNCC | 2 cut(s) | 101, 2842 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3293, 3325 |
| PstI | CTGCAG | 2 cut(s) | 2107, 2281 |
| PstNI | CAGNNNCTG | 2 cut(s) | 769, 2407 |
| PsuI | RGATCY | 4 cut(s) | 862, 1416, 1714, 3503 |
| PsyI | GACNNNGTC | 1 cut(s) | 1853 |
| RruI | TCGCGA | 1 cut(s) | 1965 |
| RsaI | GTAC | 9 cut(s) | 707, 746, 1016, 1231, 1953, 2730, 2855, 2972, 3146 |
| RsaNI | GTAC | 9 cut(s) | 706, 745, 1015, 1230, 1952, 2729, 2854, 2971, 3145 |
| RseI | CAYNNNNRTG | 3 cut(s) | 404, 435, 3407 |
| SalI | GTCGAC | 1 cut(s) | 1453 |
| Sau96I | GGNCC | 2 cut(s) | 101, 2842 |
| SchI | GAGTC | 3 cut(s) | 641, 773, 1678 |
| ScrFI | CCNGG | 5 cut(s) | 105, 170, 989, 1181, 1384 |
| SduI | GDGCHC | 2 cut(s) | 1063, 1191 |
| SfaNI | GCATC | 4 cut(s) | 439, 1704, 2507, 3243 |
| SfcI | CTRYAG | 3 cut(s) | 1544, 2103, 2277 |
| Sfr274I | CTCGAG | 1 cut(s) | 112 |
| SfuI | TTCGAA | 1 cut(s) | 1863 |
| SlaI | CTCGAG | 1 cut(s) | 112 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 404, 435, 3407 |
| SmlI | CTYRAG | 5 cut(s) | 112, 649, 1686, 1780, 2954 |
| SmoI | CTYRAG | 5 cut(s) | 112, 649, 1686, 1780, 2954 |
| SpeI | ACTAGT | 1 cut(s) | 977 |
| SspI | AATATT | 1 cut(s) | 2215 |
| SspMI | CTAG | 5 cut(s) | 978, 1553, 1905, 2477, 3053 |
| StyD4I | CCNGG | 5 cut(s) | 103, 168, 987, 1179, 1382 |
| StyI | CCWWGG | 4 cut(s) | 219, 2022, 2325, 2913 |
| TaiI | ACGT | 3 cut(s) | 61, 324, 2994 |
| TaqI | TCGA | 9 cut(s) | 40, 113, 498, 775, 1307, 1454, 1863, 2052, 2466 |
| TatI | WGTACW | 3 cut(s) | 705, 2728, 3144 |
| TauI | GCSGC | 3 cut(s) | 102, 295, 3499 |
| TfiI | GAWTC | 4 cut(s) | 42, 1619, 2086, 2754 |
| TseFI | GTSAC | 3 cut(s) | 830, 2871, 3040 |
| TseI | GCWGC | 9 cut(s) | 28, 763, 787, 1070, 1634, 1649, 2381, 2493, 3398 |
| Tsp45I | GTSAC | 3 cut(s) | 830, 2871, 3040 |
| TspGWI | ACGGA | 5 cut(s) | 106, 1512, 1786, 1896, 3324 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1853 |
| VneI | GTGCAC | 1 cut(s) | 1187 |
| VspI | ATTAAT | 1 cut(s) | 2211 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1381 |
| XapI | RAATTY | 7 cut(s) | 661, 700, 853, 1313, 1670, 2003, 2428 |
| XbaI | TCTAGA | 1 cut(s) | 2476 |
| XceI | RCATGY | 1 cut(s) | 1195 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3263 |
| XhoI | CTCGAG | 1 cut(s) | 112 |
| XmiI | GTMKAC | 2 cut(s) | 197, 1454 |
| XspI | CTAG | 5 cut(s) | 978, 1553, 1905, 2477, 3053 |
| Zsp2I | ATGCAT | 1 cut(s) | 2144 |