Rmu_sc0000579.1_g000001

Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000579.1
Physical Location & Seq
Forward (+)
10593 .. 15975
5383 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000579.1_g000001.1.cds

Sequence Viewer

Length: 3555 bp
atgaggagcggtgggagaaagagaaggctgcatttcagcaagatctattctttcacttgcggtagagcttctttgaaggaggagcattcacagattggagggccaggattttccagagtggttttctgcaacgaaccggattcgtttgaggccgggattcgaaactatgcagataattatgtcagcactaccaagtacacacttgctacattcttgcccaagtctttgtttgagcagttcaggagggtagctaacttcttcttcttggtcactggcgttttggccttcactcctctggctccgtattcagctgtcagtgccataattcctctgatcatcatcattggcgccacgatggtgaaggaggcgatcgaagattggcgtcgaaaacagcaggatattgaagtgaacaatagaaaggttaaagtgcataagggtagtggcaattttgattatactgaatggaagaatctgagagtgggagatatagtgagagtcgaaaagaatgaattctttccaacagatctcctgttactttcgtccagttacgaagatgcaatctgctatgttgagacaatgaaccttgatggggagacaaacttaaagttgaagcaagcattggaggtaacttcaccgttacaggaggacaccagcatcagcaattttcatgccatggtgaaatgtgaggacccaaatgcaaatttgtactcatttgtcggaactatggagtttgaaaagcagcagtatcccctctctcctcaacagcttcttctcagagactctaaactccgaaatacagactacatatacggagtggttatcttcaccggtgttgatacaaaggttattcaaaactctactccccctccttcaaaaagaagcagagttgagaagaagatggatcaaattatctacgtcttgtttggtgttttatttacattggcatcagttggatccattttctttggcattacaaccaaagatgacataaacaatgggatcatgaaaaggtggtatctgaagccagatagttctgaaattttctatgatcccaaaagggctcctgttgcagcaatttatcacttcttgactgctctgatgttatataactacttgatccctatctccttgtatgtgtcaatcgaaattgttaaagttcttcagagcgtcttcatcaatcaagatattcaaatgtactatgaagaagctgataaaccagcacatgcccgtacctcaaacttgaatgaagaacttggccaagttgacacaattctttcagacaagactggaactttgacatgcaattcaatggagttcatcaaatgttctgtggctggaacagcttatggccgtggttttactgaggttgagaggtctatgggcaggcgaaatggttcaccaattcatgaagctgtaactggagggaatgatgacacggcacccgttaaaggctttaattttaaagatgaaaggatcatgaatggaaattgggttgatgagcctcatggagatctcatccagaaatttttccgcttattagcagtctgccatacagccattccagaagttgatgaagtaactgggaaggttatgtatgaggctgagtctcctgatgaagcagcatttgtgattgcagcaagagaacttggttttgaattctataaaaggacacaaacaagcatatcagtgagagaattggacagaacctctggaaagaaagttgataggttgtacactctcctgaatgtgttagaattcaacagctcaaggaaacggatgtctgtgattgtaagaaatgaggaaggaaaagtactattgctctgtaaaggtgccgacaatgtcatgtttgaaagacttgccaaaaatggtagggagtttgaagaagagaccaaggagcatttaaatgggtatgctgatgcagggctaaggactttgatacttgcctatcgtgaacttcaggaagatgaatacagagagtttaatgcaaaatttatcaaggccaagaactcaattagtgcagaccgcgaaacattgattgatgaagtaacagataatgttgaaaaagatctaattcttcttggtgcgacagctgttgaggacaaacttcaaaatggggttcccgattgcatcgacaagcttgcccaagcaggaattaagatttgggttttgactggagacaagatggaaactgccatcaacattgggtttgcctgtagcttacttagacaaggaatgaaacaggttatgataaatttggagtctccagaaattaaggtgctggaaaaggaaggagataaggatgccattaccaaggcatcaagagcacgtgtcctccatcagataaccaagggaaaggcccagcttacagcatcaagtgggggatccgaggcatatgcattgatcattgatggaaaatctcttgcttatgctcttgaggatgatataaagtcattgtttctagagcttgcaatgggctgtgcatctgttatttgttgccgttcgtccccaaaacagaaagcactggtcactagactggtcaaatctggaactgggaaaacaactcttgcgattggtgatggcgccaatgatgtgggaatgctccaagaagcagatattgggattggaattagtggtgttgaaggaatgcaggcggtcatgtcaagtgatattgcgattgcacaatttcaatatttggagcgtctgctgcttgtgcatggacattggtgttacagaaggatctcatcaatgatttgctacttcttctacaagaacatcacatttggtttaactatcttcttatatgaggcatccgcatccttctctggacaacctgcatacaatgactggtttttatcactgtataatgtattcttctcatcgcttccagtggttgccatgggagttttcgaccaggatgtttctgcacgattttgtctcaagtttcctctaatataccaagaaggggtgcaaaatgttctcttcagctggcgtagaataattggttggatgttgaatggattaacaagcgcagtgattattttctttttctgcatgaaagcgctacaaccatatgccttcaatcaggatggtaaaactgctgggaaggatattctaggagcaacaatgtacacatgcatcgtttgggttgtgaacttgcagatggcacttgccataagttacttcaccttgatacaacaccttttcatctggggttccattgctttctggtatatttttatgttagcatatggagccatgtcacccacgttctctaccaatgcatacaaagtcttcgtcgaaacccttgcccccaccccttctttctggcttattacattgcttgtgccaatctcagctctactcccatatttcacatactcatcactttggatgcggttctttcctttgtatcatgaaatgatacaatggattaggtacgaggggcggtcaaatgatccagagttttgtgatatggtgcggcagagatctttgcggccaacaaccgtgggtttcacagcacggttagctgctaggaccaacattataagaagatag

Protein Analysis

1184

Amino Acids

133.72

Weight (kDa)

6.62

Isoelectric Point (pI)

36.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3545
Acc36I ACCTGC 1 cut(s) 2839
AccB1I GGYRCC 4 cut(s) 347, 1438, 1829, 2579
AccBSI CCGCTC 1 cut(s) 9
AccII CGCG 1 cut(s) 2025
AcoI YGGCCR 3 cut(s) 1255, 1348, 3494
AcsI RAATTY 8 cut(s) 509, 700, 1038, 1523, 1655, 1754, 1988, 2251
AcuI CTGAAG 4 cut(s) 1040, 1145, 1940, 2965
AcvI CACGTG 1 cut(s) 2327
AcyI GRCGYC 3 cut(s) 348, 382, 2580
AfaI GTAC 8 cut(s) 197, 707, 1196, 1231, 1733, 1812, 3128, 3437
AfeI AGCGCT 1 cut(s) 3060
AfiI CCNNNNNNNGG 3 cut(s) 589, 1448, 2962
AflIII ACRYGT 1 cut(s) 2326
AgeI ACCGGT 1 cut(s) 827
AjnI CCWGG 2 cut(s) 103, 2910
AjuI GAANNNNNNNTTGG 8 cut(s) 602, 634, 2143, 2175, 2598, 2630, 2986, 3018
AleI CACNNNNGTG 1 cut(s) 356
Alw21I GWGCWC 1 cut(s) 2326
Alw26I GTCTC 8 cut(s) 566, 587, 771, 1611, 1880, 2169, 2265, 2939
Aor51HI AGCGCT 1 cut(s) 3060
AoxI GGCC 8 cut(s) 101, 150, 282, 1255, 1348, 1998, 2355, 3494
ApeKI GCWGC 7 cut(s) 28, 739, 1070, 1619, 1634, 2704, 3527
ApoI RAATTY 8 cut(s) 509, 700, 1038, 1523, 1655, 1754, 1988, 2251
ArsI GACNNNNNNTTYG 4 cut(s) 1276, 1308, 3279, 3311
AsiGI ACCGGT 1 cut(s) 827
Asp700I GAANNNNTTC 4 cut(s) 509, 513, 1393, 1526
AspLEI GCGC 4 cut(s) 350, 2582, 3029, 3061
AspS9I GGNCC 4 cut(s) 101, 688, 2356, 3534
AsuC2I CCSGG 1 cut(s) 154
AsuHPI GGTGA 8 cut(s) 370, 624, 688, 817, 1389, 2585, 3175, 3252
AsuII TTCGAA 1 cut(s) 160
AvaII GGWCC 2 cut(s) 688, 3534
BaeI ACNNNNGTAYC 2 cut(s) 828, 861
BalI TGGCCA 1 cut(s) 1257
BamHI GGATCC 2 cut(s) 953, 2381
BanI GGYRCC 4 cut(s) 347, 1438, 1829, 2579
BanII GRGCYC 1 cut(s) 1063
BarI GAAGNNNNNNTAC 2 cut(s) 1794, 1826
BbrPI CACGTG 1 cut(s) 2327
BbsI GAAGAC 2 cut(s) 1162, 3283
Bbv12I GWGCWC 1 cut(s) 2326
BbvI GCAGC 7 cut(s) 15, 751, 1082, 1631, 1646, 2691, 3514
BceAI ACGGC 3 cut(s) 1335, 1452, 2481
BcgI CGANNNNNNTGC 6 cut(s) 2120, 2154, 2375, 2409, 3287, 3321
BciT130I CCWGG 2 cut(s) 105, 2912
BciVI GTATCC 1 cut(s) 756
BclI TGATCA 2 cut(s) 333, 2400
BcnI CCSGG 1 cut(s) 154
BcoDI GTCTC 8 cut(s) 566, 587, 771, 1611, 1880, 2169, 2265, 2939
BfaI CTAG 4 cut(s) 2459, 2529, 3113, 3531
BfmI CTRYAG 1 cut(s) 2212
BfoI RGCGCY 3 cut(s) 351, 2583, 3062
BfuAI ACCTGC 1 cut(s) 2839
BfuI GTATCC 1 cut(s) 756
BglII AGATCT 5 cut(s) 42, 523, 1510, 2065, 3485
BisI GCNGC 9 cut(s) 29, 740, 1071, 1620, 1635, 2705, 3479, 3494, 3528
BlsI GCNGC 9 cut(s) 30, 741, 1072, 1621, 1636, 2706, 3480, 3495, 3529
BmcAI AGTACT 1 cut(s) 1812
Bme1390I CCNGG 3 cut(s) 105, 154, 2912
Bme18I GGWCC 2 cut(s) 688, 3534
BmgT120I GGNCC 4 cut(s) 101, 688, 2356, 3534
BmrFI CCNGG 3 cut(s) 105, 154, 2912
BmrI ACTGGG 2 cut(s) 1590, 2559
BmuI ACTGGG 2 cut(s) 1590, 2559
BpiI GAAGAC 2 cut(s) 1162, 3283
BpmI CTGGAG 3 cut(s) 1440, 2193, 2247
Bpu10I CCTNAGC 1 cut(s) 1925
Bpu14I TTCGAA 1 cut(s) 160
BpuEI CTTGAG 3 cut(s) 1750, 2453, 2921
BpuMI CCSGG 1 cut(s) 154
BsaAI YACGTR 1 cut(s) 2327
BsaBI GATNNNNATC 2 cut(s) 338, 1121
BsaHI GRCGYC 3 cut(s) 348, 382, 2580
BsaI GGTCTC 1 cut(s) 1880
BsaJI CCNNGG 8 cut(s) 672, 1351, 1890, 2310, 2346, 2385, 2895, 3504
BsaWI WCCGGW 2 cut(s) 136, 827
BsaXI ACNNNNNCTCC 6 cut(s) 474, 504, 850, 880, 2316, 2346
Bsc4I CCNNNNNNNGG 3 cut(s) 589, 1448, 2962
Bse118I RCCGGY 1 cut(s) 827
Bse3DI GCAATG 3 cut(s) 2475, 3216, 3335
Bse8I GATNNNNATC 2 cut(s) 338, 1121
BseBI CCWGG 2 cut(s) 105, 2912
BseDI CCNNGG 8 cut(s) 672, 1351, 1890, 2310, 2346, 2385, 2895, 3504
BseJI GATNNNNATC 2 cut(s) 338, 1121
BseLI CCNNNNNNNGG 3 cut(s) 589, 1448, 2962
BseMI GCAATG 3 cut(s) 2475, 3216, 3335
BseMII CTCAG 5 cut(s) 464, 787, 1353, 1593, 3366
BseRI GAGGAG 4 cut(s) 19, 95, 282, 747
BseXI GCAGC 7 cut(s) 15, 751, 1082, 1631, 1646, 2691, 3514
BseYI CCCAGC 2 cut(s) 2358, 3098
BsgI GTGCAG 2 cut(s) 2037, 2907
Bsh1236I CGCG 1 cut(s) 2025
Bsh1285I CGRYCG 1 cut(s) 372
BshFI GGCC 8 cut(s) 103, 152, 284, 1257, 1350, 2000, 2357, 3496
BshNI GGYRCC 4 cut(s) 347, 1438, 1829, 2579
BshTI ACCGGT 1 cut(s) 827
BsiEI CGRYCG 1 cut(s) 372
BsiHKAI GWGCWC 1 cut(s) 2326
BsiSI CCGG 3 cut(s) 137, 153, 828
BslFI GGGAC 1 cut(s) 2488
BslI CCNNNNNNNGG 3 cut(s) 589, 1448, 2962
BsmAI GTCTC 8 cut(s) 566, 587, 771, 1611, 1880, 2169, 2265, 2939
BsmFI GGGAC 1 cut(s) 2488
BsmI GAATGC 3 cut(s) 85, 2601, 2649
BsnI GGCC 8 cut(s) 103, 152, 284, 1257, 1350, 2000, 2357, 3496
Bso31I GGTCTC 1 cut(s) 1880
Bsp119I TTCGAA 1 cut(s) 160
Bsp1286I GDGCHC 2 cut(s) 1063, 2326
Bsp1407I TGTACA 2 cut(s) 1731, 3126
Bsp19I CCATGG 2 cut(s) 672, 2895
BspANI GGCC 8 cut(s) 103, 152, 284, 1257, 1350, 2000, 2357, 3496
BspCNI CTCAG 5 cut(s) 465, 786, 1354, 1594, 3365
BspFNI CGCG 1 cut(s) 2025
BspHI TCATGA 4 cut(s) 1002, 1405, 1476, 3412
BspMI ACCTGC 1 cut(s) 2839
BspT104I TTCGAA 1 cut(s) 160
BspT107I GGYRCC 4 cut(s) 347, 1438, 1829, 2579
BspTNI GGTCTC 1 cut(s) 1880
BsrBI CCGCTC 1 cut(s) 9
BsrDI GCAATG 3 cut(s) 2475, 3216, 3335
BsrFI RCCGGY 1 cut(s) 827
BsrGI TGTACA 2 cut(s) 1731, 3126
BssAI RCCGGY 1 cut(s) 827
BssECI CCNNGG 8 cut(s) 672, 1351, 1890, 2310, 2346, 2385, 2895, 3504
BssNI GRCGYC 3 cut(s) 348, 382, 2580
BssT1I CCWWGG 5 cut(s) 672, 1890, 2310, 2346, 2895
Bst2UI CCWGG 2 cut(s) 105, 2912
Bst4CI ACNGT 4 cut(s) 636, 2859, 3505, 3522
Bst6I CTCTTC 2 cut(s) 1878, 2984
BstACI GRCGYC 3 cut(s) 348, 382, 2580
BstAUI TGTACA 2 cut(s) 1731, 3126
BstBAI YACGTR 1 cut(s) 2327
BstBI TTCGAA 1 cut(s) 160
BstC8I GCNNGC 6 cut(s) 615, 1385, 2139, 2466, 2649, 2987
BstDEI CTNAG 7 cut(s) 473, 773, 1362, 1602, 1925, 2222, 3352
BstDSI CCRYGG 4 cut(s) 672, 1351, 2895, 3504
BstFNI CGCG 1 cut(s) 2025
BstH2I RGCGCY 3 cut(s) 351, 2583, 3062
BstHHI GCGC 4 cut(s) 350, 2582, 3029, 3061
BstMAI GTCTC 8 cut(s) 566, 587, 771, 1611, 1880, 2169, 2265, 2939
BstMCI CGRYCG 1 cut(s) 372
BstMWI GCNNNNNNNGC 8 cut(s) 317, 1067, 1340, 2321, 2704, 2710, 3251, 3524
BstNI CCWGG 2 cut(s) 105, 2912
BstNSI RCATGY 3 cut(s) 1226, 1302, 3135
BstSCI CCNGG 3 cut(s) 103, 152, 2910
BstSFI CTRYAG 1 cut(s) 2212
BstUI CGCG 1 cut(s) 2025
BstV1I GCAGC 7 cut(s) 15, 751, 1082, 1631, 1646, 2691, 3514
BstV2I GAAGAC 2 cut(s) 1162, 3283
BstX2I RGATCY 8 cut(s) 42, 523, 953, 1510, 2065, 2381, 2736, 3485
BstXI CCANNNNNNTGG 1 cut(s) 2590
BstYI RGATCY 8 cut(s) 42, 523, 953, 1510, 2065, 2381, 2736, 3485
BsuI GTATCC 1 cut(s) 756
BsuRI GGCC 8 cut(s) 103, 152, 284, 1257, 1350, 2000, 2357, 3496
BtgI CCRYGG 4 cut(s) 672, 1351, 2895, 3504
BtgZI GCGATG 1 cut(s) 2862
BtsI GCAGTG 1 cut(s) 3036
BtsIMutI CAGTG 7 cut(s) 270, 322, 1692, 2519, 2855, 2892, 3036
BveI ACCTGC 1 cut(s) 2839
Cac8I GCNNGC 6 cut(s) 615, 1385, 2139, 2466, 2649, 2987
CciI TCATGA 4 cut(s) 1002, 1405, 1476, 3412
CfoI GCGC 4 cut(s) 350, 2582, 3029, 3061
Cfr10I RCCGGY 1 cut(s) 827
Cfr13I GGNCC 4 cut(s) 101, 688, 2356, 3534
CseI GACGC 3 cut(s) 371, 1156, 2687
Csp6I GTAC 8 cut(s) 196, 706, 1195, 1230, 1732, 1811, 3127, 3436
CspAI ACCGGT 1 cut(s) 827
CspCI CAANNNNNGTGG 2 cut(s) 3486, 3521
CviQI GTAC 8 cut(s) 196, 706, 1195, 1230, 1732, 1811, 3127, 3436
DdeI CTNAG 7 cut(s) 473, 773, 1362, 1602, 1925, 2222, 3352
DinI GGCGCC 2 cut(s) 349, 2581
DraI TTTAAA 2 cut(s) 1462, 1902
EaeI YGGCCR 3 cut(s) 1255, 1348, 3494
Eam1104I CTCTTC 2 cut(s) 1878, 2984
EarI CTCTTC 2 cut(s) 1878, 2984
Eco130I CCWWGG 5 cut(s) 672, 1890, 2310, 2346, 2895
Eco24I GRGCYC 1 cut(s) 1063
Eco31I GGTCTC 1 cut(s) 1880
Eco47I GGWCC 2 cut(s) 688, 3534
Eco47III AGCGCT 1 cut(s) 3060
Eco57I CTGAAG 4 cut(s) 1040, 1145, 1940, 2965
Eco72I CACGTG 1 cut(s) 2327
EcoO109I RGGNCCY 1 cut(s) 688
EcoRI GAATTC 3 cut(s) 509, 1655, 1754
EcoRII CCWGG 2 cut(s) 103, 2910
EcoT14I CCWWGG 5 cut(s) 672, 1890, 2310, 2346, 2895
EcoT22I ATGCAT 3 cut(s) 2398, 3137, 3283
EcoT38I GRGCYC 1 cut(s) 1063
EgeI GGCGCC 2 cut(s) 349, 2581
EheI GGCGCC 2 cut(s) 349, 2581
ErhI CCWWGG 5 cut(s) 672, 1890, 2310, 2346, 2895
FaqI GGGAC 1 cut(s) 2488
FauNDI CATATG 3 cut(s) 2392, 3070, 3247
FbaI TGATCA 2 cut(s) 333, 2400
Fnu4HI GCNGC 9 cut(s) 29, 740, 1071, 1620, 1635, 2705, 3479, 3494, 3528
FriOI GRGCYC 1 cut(s) 1063
Fsp4HI GCNGC 9 cut(s) 29, 740, 1071, 1620, 1635, 2705, 3479, 3494, 3528
FspBI CTAG 4 cut(s) 2459, 2529, 3113, 3531
GlaI GCGC 4 cut(s) 349, 2581, 3028, 3060
GluI GCNGC 9 cut(s) 29, 740, 1071, 1620, 1635, 2705, 3479, 3494, 3528
GsaI CCCAGC 2 cut(s) 2362, 3102
GsuI CTGGAG 3 cut(s) 1440, 2193, 2247
HaeII RGCGCY 3 cut(s) 351, 2583, 3062
HaeIII GGCC 8 cut(s) 103, 152, 284, 1257, 1350, 2000, 2357, 3496
HapII CCGG 3 cut(s) 137, 153, 828
HgaI GACGC 3 cut(s) 371, 1156, 2687
HhaI GCGC 4 cut(s) 350, 2582, 3029, 3061
Hin1I GRCGYC 3 cut(s) 348, 382, 2580
Hin6I GCGC 4 cut(s) 348, 2580, 3027, 3059
HinP1I GCGC 4 cut(s) 348, 2580, 3027, 3059
HincII GTYRAC 1 cut(s) 1264
HindII GTYRAC 1 cut(s) 1264
HindIII AAGCTT 1 cut(s) 2135
HinfI GANTC 7 cut(s) 140, 157, 469, 495, 779, 1604, 2258
HpaII CCGG 3 cut(s) 137, 153, 828
HphI GGTGA 8 cut(s) 370, 624, 688, 817, 1389, 2585, 3175, 3252
Hpy166II GTNNAC 8 cut(s) 198, 409, 1264, 1397, 1734, 1952, 3129, 3151
Hpy8I GTNNAC 8 cut(s) 198, 409, 1264, 1397, 1734, 1952, 3129, 3151
Hpy99I CGWCG 2 cut(s) 387, 3299
HpyCH4III ACNGT 4 cut(s) 636, 2859, 3505, 3522
HpyCH4IV ACGT 3 cut(s) 915, 2326, 3266
HpyF10VI GCNNNNNNNGC 8 cut(s) 317, 1067, 1340, 2321, 2704, 2710, 3251, 3524
HpyF3I CTNAG 7 cut(s) 473, 773, 1362, 1602, 1925, 2222, 3352
HpySE526I ACGT 3 cut(s) 915, 2326, 3266
Hsp92I GRCGYC 3 cut(s) 348, 382, 2580
HspAI GCGC 4 cut(s) 348, 2580, 3027, 3059
KasI GGCGCC 2 cut(s) 347, 2579
Ksp22I TGATCA 2 cut(s) 333, 2400
LmnI GCTCC 9 cut(s) 6, 82, 304, 1066, 1894, 2604, 2695, 3116, 3251
Lsp1109I GCAGC 7 cut(s) 15, 751, 1082, 1631, 1646, 2691, 3514
MaeI CTAG 4 cut(s) 2459, 2529, 3113, 3531
MaeII ACGT 3 cut(s) 915, 2326, 3266
MbiI CCGCTC 1 cut(s) 9
MflI RGATCY 8 cut(s) 42, 523, 953, 1510, 2065, 2381, 2736, 3485
MhlI GDGCHC 2 cut(s) 1063, 2326
MlsI TGGCCA 1 cut(s) 1257
MluNI TGGCCA 1 cut(s) 1257
Mly113I GGCGCC 2 cut(s) 348, 2580
MlyI GAGTC 4 cut(s) 504, 773, 1613, 2267
MmeI TCCRAC 4 cut(s) 542, 697, 931, 2984
Mox20I TGGCCA 1 cut(s) 1257
Mph1103I ATGCAT 3 cut(s) 2398, 3137, 3283
MroXI GAANNNNTTC 4 cut(s) 509, 513, 1393, 1526
MscI TGGCCA 1 cut(s) 1257
MslI CAYNNNNRTG 3 cut(s) 356, 1685, 1902
Msp20I TGGCCA 1 cut(s) 1257
MspA1I CMGCKG 3 cut(s) 311, 2090, 2985
MspI CCGG 3 cut(s) 137, 153, 828
MspR9I CCNGG 3 cut(s) 105, 154, 2912
Mva1269I GAATGC 3 cut(s) 85, 2601, 2649
MvaI CCWGG 2 cut(s) 105, 2912
MvnI CGCG 1 cut(s) 2025
MwoI GCNNNNNNNGC 8 cut(s) 317, 1067, 1340, 2321, 2704, 2710, 3251, 3524
NarI GGCGCC 2 cut(s) 348, 2580
NciI CCSGG 1 cut(s) 154
NcoI CCATGG 2 cut(s) 672, 2895
NdeI CATATG 3 cut(s) 2392, 3070, 3247
NmuCI GTSAC 3 cut(s) 268, 2524, 3258
NsiI ATGCAT 3 cut(s) 2398, 3137, 3283
NspI RCATGY 3 cut(s) 1226, 1302, 3135
NspV TTCGAA 1 cut(s) 160
OliI CACNNNNGTG 1 cut(s) 356
PagI TCATGA 4 cut(s) 1002, 1405, 1476, 3412
PctI GAATGC 3 cut(s) 85, 2601, 2649
PdmI GAANNNNTTC 4 cut(s) 509, 513, 1393, 1526
PfeI GAWTC 3 cut(s) 140, 157, 469
PflFI GACNNNGTC 1 cut(s) 1838
PinAI ACCGGT 1 cut(s) 827
PkrI GCNGC 9 cut(s) 30, 741, 1072, 1621, 1636, 2706, 3480, 3495, 3529
Ple19I CGATCG 1 cut(s) 372
PleI GAGTC 4 cut(s) 503, 773, 1612, 2266
PluTI GGCGCC 2 cut(s) 351, 2583
PmaCI CACGTG 1 cut(s) 2327
PmlI CACGTG 1 cut(s) 2327
PpsI GAGTC 4 cut(s) 503, 773, 1612, 2266
Ppu21I YACGTR 1 cut(s) 2327
PpuMI RGGWCCY 1 cut(s) 688
PsiI TTATAA 1 cut(s) 3545
Psp5II RGGWCCY 1 cut(s) 688
Psp6I CCWGG 2 cut(s) 103, 2910
PspCI CACGTG 1 cut(s) 2327
PspFI CCCAGC 2 cut(s) 2358, 3098
PspGI CCWGG 2 cut(s) 103, 2910
PspPI GGNCC 4 cut(s) 101, 688, 2356, 3534
PspPPI RGGWCCY 1 cut(s) 688
PsuI RGATCY 8 cut(s) 42, 523, 953, 1510, 2065, 2381, 2736, 3485
PsyI GACNNNGTC 1 cut(s) 1838
PvuI CGATCG 1 cut(s) 372
PvuII CAGCTG 3 cut(s) 311, 2090, 2985
RsaI GTAC 8 cut(s) 197, 707, 1196, 1231, 1733, 1812, 3128, 3437
RsaNI GTAC 8 cut(s) 196, 706, 1195, 1230, 1732, 1811, 3127, 3436
RseI CAYNNNNRTG 3 cut(s) 356, 1685, 1902
SatI GCNGC 9 cut(s) 29, 740, 1071, 1620, 1635, 2705, 3479, 3494, 3528
Sau96I GGNCC 4 cut(s) 101, 688, 2356, 3534
ScaI AGTACT 1 cut(s) 1812
SchI GAGTC 4 cut(s) 504, 773, 1613, 2267
ScrFI CCNGG 3 cut(s) 105, 154, 2912
SduI GDGCHC 2 cut(s) 1063, 2326
SfcI CTRYAG 1 cut(s) 2212
SfoI GGCGCC 2 cut(s) 349, 2581
SfuI TTCGAA 1 cut(s) 160
SgrAI CRCCGGYG 1 cut(s) 827
SinI GGWCC 2 cut(s) 688, 3534
SmiI ATTTAAAT 1 cut(s) 1902
SmiMI CAYNNNNRTG 3 cut(s) 356, 1685, 1902
SmlI CTYRAG 3 cut(s) 1765, 2432, 2936
SmoI CTYRAG 3 cut(s) 1765, 2432, 2936
SspDI GGCGCC 2 cut(s) 347, 2579
SspI AATATT 1 cut(s) 2690
SspMI CTAG 4 cut(s) 2459, 2529, 3113, 3531
StyD4I CCNGG 3 cut(s) 103, 152, 2910
StyI CCWWGG 5 cut(s) 672, 1890, 2310, 2346, 2895
SwaI ATTTAAAT 1 cut(s) 1902
TaaI ACNGT 4 cut(s) 636, 2859, 3505, 3522
TaiI ACGT 3 cut(s) 918, 2329, 3269
TaqI TCGA 8 cut(s) 160, 372, 385, 498, 1143, 2130, 2907, 3297
TatI WGTACW 6 cut(s) 195, 705, 1194, 1731, 1810, 3126
TauI GCSGC 2 cut(s) 3481, 3496
TfiI GAWTC 3 cut(s) 140, 157, 469
TscAI CASTG 7 cut(s) 277, 322, 1692, 2526, 2862, 2892, 3036
TseFI GTSAC 3 cut(s) 268, 2524, 3258
TseI GCWGC 7 cut(s) 28, 739, 1070, 1619, 1634, 2704, 3527
Tsp45I GTSAC 3 cut(s) 268, 2524, 3258
TspGWI ACGGA 3 cut(s) 291, 825, 1789
TspRI CASTG 7 cut(s) 277, 322, 1692, 2526, 2862, 2892, 3036
Tth111I GACNNNGTC 1 cut(s) 1838
VpaK11BI GGWCC 2 cut(s) 688, 3534
XapI RAATTY 8 cut(s) 509, 700, 1038, 1523, 1655, 1754, 1988, 2251
XbaI TCTAGA 1 cut(s) 2458
XceI RCATGY 3 cut(s) 1226, 1302, 3135
XmnI GAANNNNTTC 4 cut(s) 509, 513, 1393, 1526
XspI CTAG 4 cut(s) 2459, 2529, 3113, 3531
ZrmI AGTACT 1 cut(s) 1812
Zsp2I ATGCAT 3 cut(s) 2398, 3137, 3283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.