Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G13210 AT1G26130 AT1G26130 AT1G26130 AT1G26130 AT1G68710 AT1G68710 AT1G68710 AT3G25610 |
| fragaria_vesca | FvH4_4g28450 FvH4_5g12920 FvH4_5g12920 |
| malus_domestica | MD06G1209100.v1.1 MD13G1050400.v1.1 MD14G1219500.v1.1 MD16G1051100.v1.1 |
| prunus_persica | Prupe.1G301500_v2.0.a1 Prupe.5G214200_v2.0.a1 |
| pyrus_communis | pycom06g18670 pycom14g18190 pycom16g04490 |
| rosa_chinensis | RchiOBHm_Chr4g0436411 RchiOBHm_Chr7g0184301 |
| rosa_laevigata | RLG00000004988 RLG00000006521 |
| rosa_multiflora | Rmu_sc0000579.1_g000001 Rmu_sc0013812.1_g000007 |
| rosa_roxburghii | Rroxscaffold_3G00269750 Rroxscaffold_5G00377570 |
| rosa_rugosa | Rorug04G0293600 |
| rosa_samantha | Rh4AG348000 Rh4CG371300 Rh7AG081300 Rh7CG066300 Rh7DG065900 |
| rosa_wichuraiana | Rw4G030420 Rw7G005410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1746 |
| Acc65I | GGTACC | 1 cut(s) | 1020 |
| AccB1I | GGYRCC | 2 cut(s) | 1020, 1066 |
| AccI | GTMKAC | 2 cut(s) | 200, 261 |
| AccII | CGCG | 3 cut(s) | 1234, 1518, 1962 |
| AciI | CCGC | 8 cut(s) | 102, 296, 312, 674, 901, 1070, 1632, 1786 |
| AclI | AACGTT | 1 cut(s) | 2018 |
| AclWI | GGATC | 5 cut(s) | 1049, 1117, 1417, 1493, 1706 |
| AcoI | YGGCCR | 1 cut(s) | 1261 |
| AcsI | RAATTY | 6 cut(s) | 664, 703, 856, 1319, 1667, 2000 |
| AcuI | CTGAAG | 3 cut(s) | 1151, 1452, 1596 |
| AfaI | GTAC | 6 cut(s) | 710, 749, 1022, 1174, 1202, 1950 |
| AfeI | AGCGCT | 1 cut(s) | 561 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 162, 468, 592, 1721 |
| AflIII | ACRYGT | 1 cut(s) | 1197 |
| AhlI | ACTAGT | 1 cut(s) | 983 |
| AjnI | CCWGG | 3 cut(s) | 106, 993, 1185 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 215, 247, 248, 280 |
| Alw21I | GWGCWC | 1 cut(s) | 1197 |
| Alw26I | GTCTC | 4 cut(s) | 569, 590, 2192, 2264 |
| Alw44I | GTGCAC | 1 cut(s) | 1193 |
| AlwI | GGATC | 5 cut(s) | 1049, 1117, 1417, 1493, 1706 |
| Ama87I | CYCGRG | 3 cut(s) | 115, 652, 1227 |
| Aor51HI | AGCGCT | 1 cut(s) | 561 |
| AoxI | GGCC | 6 cut(s) | 103, 153, 1261, 1629, 2010, 2367 |
| ApaLI | GTGCAC | 1 cut(s) | 1193 |
| ApeKI | GCWGC | 5 cut(s) | 766, 790, 1076, 1646, 2378 |
| ApoI | RAATTY | 6 cut(s) | 664, 703, 856, 1319, 1667, 2000 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 641, 673 |
| AseI | ATTAAT | 1 cut(s) | 2208 |
| Asp718I | GGTACC | 1 cut(s) | 1020 |
| AspLEI | GCGC | 5 cut(s) | 562, 1234, 1236, 1520, 1844 |
| AspS9I | GGNCC | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 3 cut(s) | 452, 1611, 2035 |
| AvaI | CYCGRG | 3 cut(s) | 115, 652, 1227 |
| BaeGI | GKGCMC | 2 cut(s) | 1069, 1197 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 831, 864, 1029, 1062 |
| BalI | TGGCCA | 1 cut(s) | 1263 |
| BanI | GGYRCC | 2 cut(s) | 1020, 1066 |
| BbsI | GAAGAC | 5 cut(s) | 654, 696, 961, 1904, 2115 |
| Bbv12I | GWGCWC | 1 cut(s) | 1197 |
| BbvI | GCAGC | 5 cut(s) | 777, 778, 1088, 1658, 2365 |
| BccI | CCATC | 6 cut(s) | 352, 584, 898, 995, 1011, 2355 |
| BceAI | ACGGC | 2 cut(s) | 299, 2328 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1333, 1367 |
| BciT130I | CCWGG | 3 cut(s) | 108, 995, 1187 |
| BclI | TGATCA | 1 cut(s) | 1011 |
| BcoDI | GTCTC | 4 cut(s) | 569, 590, 2192, 2264 |
| BcuI | ACTAGT | 1 cut(s) | 983 |
| BfaI | CTAG | 3 cut(s) | 984, 1389, 1902 |
| BfmI | CTRYAG | 3 cut(s) | 1541, 2100, 2274 |
| BfoI | RGCGCY | 2 cut(s) | 563, 1845 |
| BisI | GCNGC | 8 cut(s) | 103, 296, 767, 791, 1077, 1632, 1647, 2379 |
| BlsI | GCNGC | 8 cut(s) | 104, 297, 768, 792, 1078, 1633, 1648, 2380 |
| Bme1390I | CCNGG | 3 cut(s) | 108, 995, 1187 |
| BmeT110I | CYCGRG | 3 cut(s) | 115, 652, 1227 |
| BmgT120I | GGNCC | 1 cut(s) | 104 |
| BmiI | GGNNCC | 3 cut(s) | 1022, 1068, 2130 |
| BmrFI | CCNGG | 3 cut(s) | 108, 995, 1187 |
| BmsI | GCATC | 4 cut(s) | 40, 442, 1701, 1918 |
| BpiI | GAAGAC | 5 cut(s) | 654, 696, 961, 1904, 2115 |
| BpmI | CTGGAG | 1 cut(s) | 2205 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2154 |
| Bsa29I | ATCGAT | 2 cut(s) | 868, 2415 |
| BsaI | GGTCTC | 1 cut(s) | 569 |
| BsaJI | CCNNGG | 4 cut(s) | 106, 156, 222, 2322 |
| BsaWI | WCCGGW | 1 cut(s) | 1292 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 162, 468, 592, 1721 |
| Bse1I | ACTGG | 2 cut(s) | 627, 2188 |
| Bse3DI | GCAATG | 2 cut(s) | 234, 1697 |
| BseBI | CCWGG | 3 cut(s) | 108, 995, 1187 |
| BseCI | ATCGAT | 2 cut(s) | 868, 2415 |
| BseDI | CCNNGG | 4 cut(s) | 106, 156, 222, 2322 |
| BseGI | GGATG | 5 cut(s) | 909, 1003, 1195, 1483, 1794 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 162, 468, 592, 1721 |
| BseMI | GCAATG | 2 cut(s) | 234, 1697 |
| BseMII | CTCAG | 5 cut(s) | 132, 1039, 1998, 2168, 2388 |
| BseNI | ACTGG | 2 cut(s) | 627, 2188 |
| BsePI | GCGCGC | 1 cut(s) | 1232 |
| BseRI | GAGGAG | 2 cut(s) | 400, 1418 |
| BseSI | GKGCMC | 2 cut(s) | 1069, 1197 |
| BseXI | GCAGC | 5 cut(s) | 777, 778, 1088, 1658, 2365 |
| BsgI | GTGCAG | 3 cut(s) | 626, 2245, 2364 |
| Bsh1236I | CGCG | 3 cut(s) | 1234, 1518, 1962 |
| BshFI | GGCC | 6 cut(s) | 105, 155, 1263, 1631, 2012, 2369 |
| BshNI | GGYRCC | 2 cut(s) | 1020, 1066 |
| BshVI | ATCGAT | 2 cut(s) | 868, 2415 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1197 |
| BsiHKCI | CYCGRG | 3 cut(s) | 115, 652, 1227 |
| BsiSI | CCGG | 1 cut(s) | 1293 |
| BslFI | GGGAC | 2 cut(s) | 314, 794 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 162, 468, 592, 1721 |
| BsmAI | GTCTC | 4 cut(s) | 569, 590, 2192, 2264 |
| BsmFI | GGGAC | 2 cut(s) | 314, 794 |
| BsmI | GAATGC | 1 cut(s) | 2141 |
| BsnI | GGCC | 6 cut(s) | 105, 155, 1263, 1631, 2012, 2369 |
| Bso31I | GGTCTC | 1 cut(s) | 569 |
| BsoBI | CYCGRG | 3 cut(s) | 115, 652, 1227 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1069, 1197 |
| Bsp68I | TCGCGA | 1 cut(s) | 1962 |
| BspACI | CCGC | 8 cut(s) | 102, 296, 312, 674, 901, 1070, 1632, 1786 |
| BspANI | GGCC | 6 cut(s) | 105, 155, 1263, 1631, 2012, 2369 |
| BspCNI | CTCAG | 5 cut(s) | 133, 1038, 1999, 2167, 2389 |
| BspDI | ATCGAT | 2 cut(s) | 868, 2415 |
| BspFNI | CGCG | 3 cut(s) | 1234, 1518, 1962 |
| BspHI | TCATGA | 1 cut(s) | 1488 |
| BspLI | GGNNCC | 3 cut(s) | 1022, 1068, 2130 |
| BspMAI | CTGCAG | 3 cut(s) | 1545, 2104, 2278 |
| BspPI | GGATC | 5 cut(s) | 1049, 1117, 1417, 1493, 1706 |
| BspT107I | GGYRCC | 2 cut(s) | 1020, 1066 |
| BspTNI | GGTCTC | 1 cut(s) | 569 |
| BsrDI | GCAATG | 2 cut(s) | 234, 1697 |
| BsrI | ACTGG | 2 cut(s) | 627, 2188 |
| BssECI | CCNNGG | 4 cut(s) | 106, 156, 222, 2322 |
| BssHII | GCGCGC | 1 cut(s) | 1232 |
| BssNAI | GTATAC | 2 cut(s) | 201, 262 |
| BssT1I | CCWWGG | 2 cut(s) | 222, 2322 |
| Bst1107I | GTATAC | 2 cut(s) | 201, 262 |
| Bst2UI | CCWGG | 3 cut(s) | 108, 995, 1187 |
| Bst4CI | ACNGT | 5 cut(s) | 131, 160, 747, 1045, 1850 |
| Bst6I | CTCTTC | 5 cut(s) | 1413, 1591, 1806, 1887, 2382 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1073 |
| BstC8I | GCNNGC | 7 cut(s) | 1074, 1224, 1234, 1342, 2151, 2224, 2376 |
| BstDEI | CTNAG | 8 cut(s) | 141, 879, 937, 1025, 2007, 2154, 2234, 2397 |
| BstDSI | CCRYGG | 1 cut(s) | 156 |
| BstF5I | GGATG | 5 cut(s) | 909, 1003, 1195, 1483, 1794 |
| BstFNI | CGCG | 3 cut(s) | 1234, 1518, 1962 |
| BstH2I | RGCGCY | 2 cut(s) | 563, 1845 |
| BstHHI | GCGC | 5 cut(s) | 562, 1234, 1236, 1520, 1844 |
| BstMAI | GTCTC | 4 cut(s) | 569, 590, 2192, 2264 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 301, 766, 1073, 1346, 2375 |
| BstNI | CCWGG | 3 cut(s) | 108, 995, 1187 |
| BstNSI | RCATGY | 1 cut(s) | 1201 |
| BstSCI | CCNGG | 3 cut(s) | 106, 993, 1185 |
| BstSFI | CTRYAG | 3 cut(s) | 1541, 2100, 2274 |
| BstSLI | GKGCMC | 2 cut(s) | 1069, 1197 |
| BstUI | CGCG | 3 cut(s) | 1234, 1518, 1962 |
| BstV1I | GCAGC | 5 cut(s) | 777, 778, 1088, 1658, 2365 |
| BstV2I | GAAGAC | 5 cut(s) | 654, 696, 961, 1904, 2115 |
| BstX2I | RGATCY | 2 cut(s) | 1422, 1711 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2020 |
| BstYI | RGATCY | 2 cut(s) | 1422, 1711 |
| BstZ17I | GTATAC | 2 cut(s) | 201, 262 |
| Bsu15I | ATCGAT | 2 cut(s) | 868, 2415 |
| BsuRI | GGCC | 6 cut(s) | 105, 155, 1263, 1631, 2012, 2369 |
| BsuTUI | ATCGAT | 2 cut(s) | 868, 2415 |
| BtgI | CCRYGG | 1 cut(s) | 156 |
| BtsCI | GGATG | 5 cut(s) | 909, 1003, 1195, 1483, 1794 |
| BtsI | GCAGTG | 1 cut(s) | 1344 |
| BtsIMutI | CAGTG | 5 cut(s) | 620, 1175, 1344, 1855, 2004 |
| BtuMI | TCGCGA | 1 cut(s) | 1962 |
| Cac8I | GCNNGC | 7 cut(s) | 1074, 1224, 1234, 1342, 2151, 2224, 2376 |
| CciI | TCATGA | 1 cut(s) | 1488 |
| CfoI | GCGC | 5 cut(s) | 562, 1234, 1236, 1520, 1844 |
| Cfr13I | GGNCC | 1 cut(s) | 104 |
| ClaI | ATCGAT | 2 cut(s) | 868, 2415 |
| Csp6I | GTAC | 6 cut(s) | 709, 748, 1021, 1173, 1201, 1949 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 568, 603 |
| CviAII | CATG | 7 cut(s) | 50, 60, 1198, 1427, 1489, 1703, 1855 |
| CviQI | GTAC | 6 cut(s) | 709, 748, 1021, 1173, 1201, 1949 |
| DdeI | CTNAG | 8 cut(s) | 141, 879, 937, 1025, 2007, 2154, 2234, 2397 |
| EaeI | YGGCCR | 1 cut(s) | 1261 |
| Eam1104I | CTCTTC | 5 cut(s) | 1413, 1591, 1806, 1887, 2382 |
| EarI | CTCTTC | 5 cut(s) | 1413, 1591, 1806, 1887, 2382 |
| EciI | GGCGGA | 1 cut(s) | 301 |
| Eco130I | CCWWGG | 2 cut(s) | 222, 2322 |
| Eco147I | AGGCCT | 1 cut(s) | 2369 |
| Eco31I | GGTCTC | 1 cut(s) | 569 |
| Eco47III | AGCGCT | 1 cut(s) | 561 |
| Eco57I | CTGAAG | 3 cut(s) | 1151, 1452, 1596 |
| Eco88I | CYCGRG | 3 cut(s) | 115, 652, 1227 |
| EcoRI | GAATTC | 2 cut(s) | 856, 2000 |
| EcoRII | CCWGG | 3 cut(s) | 106, 993, 1185 |
| EcoT14I | CCWWGG | 2 cut(s) | 222, 2322 |
| EcoT22I | ATGCAT | 1 cut(s) | 2141 |
| ErhI | CCWWGG | 2 cut(s) | 222, 2322 |
| FaeI | CATG | 7 cut(s) | 53, 63, 1201, 1430, 1492, 1706, 1858 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2100, 2132 |
| FaqI | GGGAC | 2 cut(s) | 314, 794 |
| FatI | CATG | 7 cut(s) | 49, 59, 1197, 1426, 1488, 1702, 1854 |
| FauNDI | CATATG | 1 cut(s) | 1606 |
| FbaI | TGATCA | 1 cut(s) | 1011 |
| FblI | GTMKAC | 2 cut(s) | 200, 261 |
| Fnu4HI | GCNGC | 8 cut(s) | 103, 296, 767, 791, 1077, 1632, 1647, 2379 |
| FokI | GGATG | 5 cut(s) | 916, 1010, 1202, 1490, 1801 |
| Fsp4HI | GCNGC | 8 cut(s) | 103, 296, 767, 791, 1077, 1632, 1647, 2379 |
| FspBI | CTAG | 3 cut(s) | 984, 1389, 1902 |
| GlaI | GCGC | 5 cut(s) | 561, 1233, 1235, 1519, 1843 |
| GluI | GCNGC | 8 cut(s) | 103, 296, 767, 791, 1077, 1632, 1647, 2379 |
| GsuI | CTGGAG | 1 cut(s) | 2205 |
| HaeII | RGCGCY | 2 cut(s) | 563, 1845 |
| HaeIII | GGCC | 6 cut(s) | 105, 155, 1263, 1631, 2012, 2369 |
| HapII | CCGG | 1 cut(s) | 1293 |
| HhaI | GCGC | 5 cut(s) | 562, 1234, 1236, 1520, 1844 |
| Hin1II | CATG | 7 cut(s) | 53, 63, 1201, 1430, 1492, 1706, 1858 |
| Hin6I | GCGC | 5 cut(s) | 560, 1232, 1234, 1518, 1842 |
| HinP1I | GCGC | 5 cut(s) | 560, 1232, 1234, 1518, 1842 |
| HincII | GTYRAC | 1 cut(s) | 1410 |
| HindII | GTYRAC | 1 cut(s) | 1410 |
| HindIII | AAGCTT | 2 cut(s) | 69, 2147 |
| HinfI | GANTC | 6 cut(s) | 45, 650, 782, 1616, 1681, 2083 |
| HpaII | CCGG | 1 cut(s) | 1293 |
| HphI | GGTGA | 3 cut(s) | 452, 1611, 2035 |
| Hpy166II | GTNNAC | 7 cut(s) | 127, 201, 262, 1048, 1173, 1195, 1410 |
| Hpy8I | GTNNAC | 7 cut(s) | 127, 201, 262, 1048, 1173, 1195, 1410 |
| Hpy99I | CGWCG | 3 cut(s) | 329, 341, 344 |
| HpyCH4III | ACNGT | 5 cut(s) | 131, 160, 747, 1045, 1850 |
| HpyCH4IV | ACGT | 2 cut(s) | 324, 2018 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 301, 766, 1073, 1346, 2375 |
| HpyF3I | CTNAG | 8 cut(s) | 141, 879, 937, 1025, 2007, 2154, 2234, 2397 |
| HpySE526I | ACGT | 2 cut(s) | 324, 2018 |
| Hsp92II | CATG | 7 cut(s) | 53, 63, 1201, 1430, 1492, 1706, 1858 |
| HspAI | GCGC | 5 cut(s) | 560, 1232, 1234, 1518, 1842 |
| KpnI | GGTACC | 1 cut(s) | 1024 |
| Ksp22I | TGATCA | 1 cut(s) | 1011 |
| LmnI | GCTCC | 1 cut(s) | 2270 |
| Lsp1109I | GCAGC | 5 cut(s) | 777, 778, 1088, 1658, 2365 |
| LweI | GCATC | 4 cut(s) | 40, 442, 1701, 1918 |
| MaeI | CTAG | 3 cut(s) | 984, 1389, 1902 |
| MaeII | ACGT | 2 cut(s) | 324, 2018 |
| MaeIII | GTNAC | 5 cut(s) | 352, 833, 1363, 1545, 2317 |
| MfeI | CAATTG | 1 cut(s) | 963 |
| MflI | RGATCY | 2 cut(s) | 1422, 1711 |
| MhlI | GDGCHC | 2 cut(s) | 1069, 1197 |
| MlsI | TGGCCA | 1 cut(s) | 1263 |
| MluNI | TGGCCA | 1 cut(s) | 1263 |
| MlyI | GAGTC | 3 cut(s) | 644, 776, 1690 |
| MmeI | TCCRAC | 1 cut(s) | 1082 |
| Mox20I | TGGCCA | 1 cut(s) | 1263 |
| Mph1103I | ATGCAT | 1 cut(s) | 2141 |
| MscI | TGGCCA | 1 cut(s) | 1263 |
| MseI | TTAA | 8 cut(s) | 978, 1094, 1301, 1467, 1506, 1914, 2166, 2208 |
| MslI | CAYNNNNRTG | 2 cut(s) | 407, 438 |
| Msp20I | TGGCCA | 1 cut(s) | 1263 |
| MspI | CCGG | 1 cut(s) | 1293 |
| MspR9I | CCNGG | 3 cut(s) | 108, 995, 1187 |
| MunI | CAATTG | 1 cut(s) | 963 |
| Mva1269I | GAATGC | 1 cut(s) | 2141 |
| MvaI | CCWGG | 3 cut(s) | 108, 995, 1187 |
| MvnI | CGCG | 3 cut(s) | 1234, 1518, 1962 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 301, 766, 1073, 1346, 2375 |
| NdeI | CATATG | 1 cut(s) | 1606 |
| NlaIII | CATG | 7 cut(s) | 53, 63, 1201, 1430, 1492, 1706, 1858 |
| NlaIV | GGNNCC | 3 cut(s) | 1022, 1068, 2130 |
| NmuCI | GTSAC | 1 cut(s) | 833 |
| NruI | TCGCGA | 1 cut(s) | 1962 |
| NsiI | ATGCAT | 1 cut(s) | 2141 |
| NspI | RCATGY | 1 cut(s) | 1201 |
| PaeR7I | CTCGAG | 2 cut(s) | 115, 652 |
| PagI | TCATGA | 1 cut(s) | 1488 |
| PauI | GCGCGC | 1 cut(s) | 1232 |
| PceI | AGGCCT | 1 cut(s) | 2369 |
| PciI | ACATGT | 1 cut(s) | 1197 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 333, 507 |
| PctI | GAATGC | 1 cut(s) | 2141 |
| PfeI | GAWTC | 3 cut(s) | 45, 1616, 2083 |
| PflFI | GACNNNGTC | 1 cut(s) | 1850 |
| PkrI | GCNGC | 8 cut(s) | 104, 297, 768, 792, 1078, 1633, 1648, 2380 |
| PleI | GAGTC | 3 cut(s) | 644, 776, 1689 |
| PpsI | GAGTC | 3 cut(s) | 644, 776, 1689 |
| PscI | ACATGT | 1 cut(s) | 1197 |
| PshBI | ATTAAT | 1 cut(s) | 2208 |
| PsiI | TTATAA | 1 cut(s) | 1746 |
| Psp1406I | AACGTT | 1 cut(s) | 2018 |
| Psp6I | CCWGG | 3 cut(s) | 106, 993, 1185 |
| PspGI | CCWGG | 3 cut(s) | 106, 993, 1185 |
| PspN4I | GGNNCC | 3 cut(s) | 1022, 1068, 2130 |
| PspPI | GGNCC | 1 cut(s) | 104 |
| PspXI | VCTCGAGB | 1 cut(s) | 652 |
| PstI | CTGCAG | 3 cut(s) | 1545, 2104, 2278 |
| PsuI | RGATCY | 2 cut(s) | 1422, 1711 |
| PsyI | GACNNNGTC | 1 cut(s) | 1850 |
| PteI | GCGCGC | 1 cut(s) | 1232 |
| RruI | TCGCGA | 1 cut(s) | 1962 |
| RsaI | GTAC | 6 cut(s) | 710, 749, 1022, 1174, 1202, 1950 |
| RsaNI | GTAC | 6 cut(s) | 709, 748, 1021, 1173, 1201, 1949 |
| RseI | CAYNNNNRTG | 2 cut(s) | 407, 438 |
| SaqAI | TTAA | 8 cut(s) | 978, 1094, 1301, 1467, 1506, 1914, 2166, 2208 |
| SatI | GCNGC | 8 cut(s) | 103, 296, 767, 791, 1077, 1632, 1647, 2379 |
| Sau96I | GGNCC | 1 cut(s) | 104 |
| SchI | GAGTC | 3 cut(s) | 644, 776, 1690 |
| ScrFI | CCNGG | 3 cut(s) | 108, 995, 1187 |
| SduI | GDGCHC | 2 cut(s) | 1069, 1197 |
| SfaNI | GCATC | 4 cut(s) | 40, 442, 1701, 1918 |
| SfcI | CTRYAG | 3 cut(s) | 1541, 2100, 2274 |
| Sfr274I | CTCGAG | 2 cut(s) | 115, 652 |
| SlaI | CTCGAG | 2 cut(s) | 115, 652 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 407, 438 |
| SmlI | CTYRAG | 2 cut(s) | 115, 652 |
| SmoI | CTYRAG | 2 cut(s) | 115, 652 |
| SpeI | ACTAGT | 1 cut(s) | 983 |
| SseBI | AGGCCT | 1 cut(s) | 2369 |
| SsiI | CCGC | 8 cut(s) | 102, 296, 312, 674, 901, 1070, 1632, 1786 |
| SspI | AATATT | 1 cut(s) | 2212 |
| SspMI | CTAG | 3 cut(s) | 984, 1389, 1902 |
| StuI | AGGCCT | 1 cut(s) | 2369 |
| StyD4I | CCNGG | 3 cut(s) | 106, 993, 1185 |
| StyI | CCWWGG | 2 cut(s) | 222, 2322 |
| TaaI | ACNGT | 5 cut(s) | 131, 160, 747, 1045, 1850 |
| TaiI | ACGT | 2 cut(s) | 327, 2021 |
| TaqI | TCGA | 8 cut(s) | 116, 234, 501, 653, 868, 2049, 2070, 2415 |
| TatI | WGTACW | 3 cut(s) | 708, 1172, 1200 |
| TauI | GCSGC | 3 cut(s) | 105, 298, 1634 |
| TfiI | GAWTC | 3 cut(s) | 45, 1616, 2083 |
| Tru1I | TTAA | 8 cut(s) | 978, 1094, 1301, 1467, 1506, 1914, 2166, 2208 |
| Tru9I | TTAA | 8 cut(s) | 978, 1094, 1301, 1467, 1506, 1914, 2166, 2208 |
| TscAI | CASTG | 5 cut(s) | 627, 1175, 1351, 1855, 2011 |
| TseFI | GTSAC | 1 cut(s) | 833 |
| TseI | GCWGC | 5 cut(s) | 766, 790, 1076, 1646, 2378 |
| Tsp45I | GTSAC | 1 cut(s) | 833 |
| TspGWI | ACGGA | 4 cut(s) | 109, 815, 1737, 1893 |
| TspRI | CASTG | 5 cut(s) | 627, 1175, 1351, 1855, 2011 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1850 |
| VneI | GTGCAC | 1 cut(s) | 1193 |
| VspI | ATTAAT | 1 cut(s) | 2208 |
| XapI | RAATTY | 6 cut(s) | 664, 703, 856, 1319, 1667, 2000 |
| XceI | RCATGY | 1 cut(s) | 1201 |
| XhoI | CTCGAG | 2 cut(s) | 115, 652 |
| XmiI | GTMKAC | 2 cut(s) | 200, 261 |
| XspI | CTAG | 3 cut(s) | 984, 1389, 1902 |
| Zsp2I | ATGCAT | 1 cut(s) | 2141 |