Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003148

Physical Location & Seq

Genomic Coordinates Forward (+)

7302852 .. 7308755

Gene Structure 5904 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g12920.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3585 bp

ATGGGTGGTAGTAGTGGTAGAAGAAAGAAGCAGCATTTCGGCAGAATCCATGCCTTTCATCGTGGAAAGCCATCCTTGGATGGCGAGCATTCGCAGATCGGAGGCCCCGGATTCTCTAGAGTAGTCCATTGCAATGACCCTGAATGCCTTGAGGCCACTGCTAAGAACTATAAAAGCAATTATGTTAGAACCACCAAGTATACACTTGCTACATTCTTACCTAAGGCAGTGTTTGAGCAATTCAGAAGGGTTGCAAATTTATATTTCCTCATTTGTGCAATACTGTCATTTACACCGCTGTCTCCTTACTCGGCTGTCAGTAATGTTGTCCCTCTTGTGGTTGTGGTGGGAGTTACGATGGGAAAAGAGGCCCTTGAAGATTGGCGACGCAAAAAGCAGGATATGGATGGGAACAACAGAAAAGTTCTGGTGCATCAATCGGAAGGTGAATTTGATTTTAGTAAGTGGAGGGATTTGAAAGTTGGGGATATAGTGAAAGTGGAAAAGGACCAATTTTTTCCTGCTGATCTTATTTTACTTTCATCAAGCTATGATGAAGCACATTGCTATGTAGAGACCACCAATCTTGACGGGGAAACTAATTTGAAAATCAAACAATCTCTGGAAGCAACTTCTTCTAATATTCATGAAGATTCGAGTTTCAAAGACTTCAAGGCTTTGATCAGGTGTGAAGACCCGAATGCAAGTCTCTACTCATTCGTAGGGAGTCTGGAGTTTGAAGGGGAATCATACCCTCTTACACCTCAGCAGCTTCTGCTTAGGGACTCTAAGCTGAGAAACACTGATTTTATATATGGGGTTGTAATCTTCACAGGTCATGATACAAAAGTTATGCAAAACTCGACTGAACCACCTTCCAAGAGAAGCAAAATTGAGAAAAGGATGGATAAGATAGTCTACTTCTTGTTTTTCCTCTTAGTTGTGATGTCTACTGTTGGTGCTATTGTCTTTGGGGTTACAACTAGCCAAGACATAGAAGATGGGGCATTGATAAGATGGTACCTTAGACCAGATGATACTACAATTTACTATGATCCTACGAGAGCAGCAGTTGCAGCCATTTTGCAGTTCTTGACTGCCGTTATGTTGTACAGTTATCTGATTCCCATTTCCTTGTATGTGTCGATAGAGATTGTTAAAGTGCTCCAGGGCGTTTTCATCAACCAGGATCTGCACATGTACTATGAGGAAACTGACACGCCAGCTCGAGCACGTACCTCAAACTTGAATGAAGAACTTGGCCAAGTTGATACTATTCTATCAGACAAAACAGGAACCTTAACTTGCAACTCAATGGAGTTTATCAAGTGTTCTATTGCCGGGACTGCTTTTGGGCGCGGAGTTACAGAAGTCGAGAGAGCTTTGTCCAGTGGTAAAGGCTCGTCTTTTTTTGGAGGGGTGACAGAAGAAGAAGGCCAAGTTGAAGAATCTGCTGAAGCCAAGACATTAATAAAAGGCTTTAACTTTATGGATGAAAGAATAGTGGATGGAAATTGGGTAAGGGAGCCTCATGCAGATGTAATCCAGAAGTTTCTACAGTTACTTGCCGTCTGTCATACTGCAATACCTGACGTTGATGAAGAATCTGGAAGAGTTTCATATGAGGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCAAGAGAGCTTGGGTTTGAATTTTATGAAAGGGCTCAAACAACCATCTCCCTGCACGAGTTTGATCCTATGTCTGGAAGGAGAGTTGAAAGATCTTATCAGATTTTGAATGTATTGGAGTTTAGTAGCTCAAGGAAGCGAATGTCTGTGATTGTAAGAAATGAGGAGGGAAAGATACTATTGCTCAGTAAAGGTGCTGACAGTGTCATGTTCCAAAGACTTGCAAAGGATGGAAGGGAGTTTGAAGAGAAGACCCGGGAGCACATTAACGAGTATGCTGATGCTGGTTTGAGGACTTTAGTACTTGCATATCGGGAACTTGATGAAGAAGAATACTTTGAGTTTAACAAAGAATATACCGAGGCCAAGAACTTAGTTAGTGCAGATCGAGAGGATGCTGTGGAGGAAGTGGCTGAGAAGATTGAGAGGAATTTGATTCTTCTTGGTGCTACTGCAGTTGAAGACAAACTTCAAAATGGGGTTCCTGACTGCATTGACAAGCTTGCTCAGGCTGGAATTAAACTATGGGTTTTGACTGGAGATAAAATGGAGACAGCAATAAATATTGGATATGCCTGCAGTTTGCTTCGACAAGGAATGAAGCAAATAATAATAAGCTCAGAAACCTCAGAAGCTAAAGCATTAGAGAAGGTGGAGGACAAATCGAAAGTGGCCACGGCATTGAAAGAAAGTGTTATTCATCAAATAAGTGAGGCAAAGGCATTGCTTGCTTCACCAGATGAGAACTCCGAAGCATTGGCTTTGATCATTGATGGGAATTCACTCACTTATGCCTTAGAGGCAGATGTCCAGGACCTATTTCTAGATCTTGCCATTGGCTGTGCCTCTGTTATATGCTGTCGTTCATCTCCCAAACAGAAAGCACTTGTTACAAGACTGGTAAAAATTAAAACTGGTAAAACAACTTTGGCAATTGGTGATGGGGCAAATGATGTAGGAATGCTTCAAGAAGCAGATATTGGTATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTCATGTCAAGTGACATTGCAATTGCACAGTTTCGTTTTCTAGAGCGCCTGCTACTCGTACATGGACATTGGTGTTACAGAAGAATCTCGTCAATGATATGCTATTTCTTCTACAAGAACATTACTTTTGGCTTCACTATCTTTTTCTATGAGATGTATGCTTCATACTCGGGTCAATCTGCATATAATGATTGGTATCTATCACTCTATAACGTCTTCTTCACATCACTTCCTGTAATTGCATTGGGAGTGTTTGACCAAGATGTCTCTGCCAGATTCTGCCTCAAGTTCCCTCTCTTGTACCAAGAAGGTGCACAAAATGTCTTATTTAGCTGGGTCCGGATACTTGGATGGTTGCTGAATGGCATAGTCACTGCCACAATAATCTTCTTCTCCTGCATCCTGGCAATAGGTAGTCAAGCCTTTCGCAAAGGCGGGGAAGTTGTTGGCTTCGAGATCTTTGGTGCCACCATGTACTCAATTGTGGTATGGGTGGTCAACTGTCAGATGGCACTATCCATCAATTACTTCACTTACATACAACATCTCTTCATCTGGGGTGGCATTGTGTTCTGGTACATATTCCAGCTGGCTTATGGTGCCTTGGACCCTTCCATATCAACCACTGCCTATAAGGTCTTTATTGAAGCATGTGCACCTGCCCCATTCTACTGGCTTGTTACACTCTTGGTAGTAGTCACTTCTCTCCTACCTTATTTCACTTATTCCGCCTTCCAAATGCGATTCTTCCCCATGTATCATCAAATGATACAATGGATGAGAACAGATGGGCAATCAGATGACCCTGAGTTCTGTCATATGGTGCGGCAGAGATCGATAAGATCCACAACAGTAGGCTACACAGCTCGTATTGCAAGGTCCAGACGCTTTGAAGAGGGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase Hydrolase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1195

Amino Acids

134.52

Weight (kDa)

5.35

Isoelectric Point (pI)

40.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	42 - 107	4.1e-24	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	516 - 712	7e-21	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	894 - 1144	2.9e-87	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13210 AT1G26130 AT1G26130 AT1G26130 AT1G26130 AT1G68710 AT1G68710 AT1G68710 AT3G25610
fragaria_vesca	FvH4_4g28450 FvH4_5g12920 FvH4_5g12920
malus_domestica	MD06G1209100.v1.1 MD13G1050400.v1.1 MD14G1219500.v1.1 MD16G1051100.v1.1
prunus_persica	Prupe.1G301500_v2.0.a1 Prupe.5G214200_v2.0.a1
pyrus_communis	pycom06g18670 pycom14g18190 pycom16g04490
rosa_chinensis	RchiOBHm_Chr4g0436411 RchiOBHm_Chr7g0184301
rosa_laevigata	RLG00000004988 RLG00000006521
rosa_multiflora	Rmu_sc0000579.1_g000001 Rmu_sc0013812.1_g000007
rosa_roxburghii	Rroxscaffold_3G00269750 Rroxscaffold_5G00377570
rosa_rugosa	Rorug04G0293600
rosa_samantha	Rh4AG348000 Rh4CG371300 Rh7AG081300 Rh7CG066300 Rh7DG065900
rosa_wichuraiana	Rw4G030420 Rw7G005410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3346
AasI	GACNNNNNNGTC	1 cut(s)	2942
Acc36I	ACCTGC	1 cut(s)	3346
Acc65I	GGTACC	1 cut(s)	1020
AccB1I	GGYRCC	3 cut(s)	1020, 3143, 3278
AccI	GTMKAC	3 cut(s)	200, 918, 950
AccII	CGCG	1 cut(s)	1359
AccIII	TCCGGA	1 cut(s)	3018
AciI	CCGC	5 cut(s)	296, 1359, 3114, 3408, 3505
AclWI	GGATC	4 cut(s)	1049, 1197, 1721, 3516
AcoI	YGGCCR	2 cut(s)	1261, 2334
AcsI	RAATTY	5 cut(s)	256, 449, 1682, 2092, 2440
AcuI	CTGAAG	1 cut(s)	1476
AfaI	GTAC	9 cut(s)	1022, 1112, 1202, 1237, 1965, 2739, 2981, 3155, 3257
AfiI	CCNNNNNNNGG	2 cut(s)	337, 1736
AflIII	ACRYGT	1 cut(s)	1197
AjnI	CCWGG	4 cut(s)	1167, 1185, 2472, 3081
AjuI	GAANNNNNNNTTGG	2 cut(s)	2625, 2657
Alw21I	GWGCWC	5 cut(s)	1167, 1234, 1926, 2995, 3337
Alw26I	GTCTC	5 cut(s)	306, 569, 713, 2207, 2950
Alw44I	GTGCAC	2 cut(s)	2991, 3333
AlwI	GGATC	4 cut(s)	1049, 1197, 1721, 3516
AlwNI	CAGNNNCTG	3 cut(s)	775, 1192, 2958
Ama87I	CYCGRG	3 cut(s)	1227, 1917, 2848
Aor13HI	TCCGGA	1 cut(s)	3018
AoxI	GGCC	7 cut(s)	103, 153, 369, 1261, 1435, 2025, 2334
ApaLI	GTGCAC	2 cut(s)	2991, 3333
ApeKI	GCWGC	6 cut(s)	31, 769, 1067, 1076, 1646, 1661
ApoI	RAATTY	5 cut(s)	256, 449, 1682, 2092, 2440
AseI	ATTAAT	1 cut(s)	1469
Asp700I	GAANNNNTTC	1 cut(s)	1615
Asp718I	GGTACC	1 cut(s)	1020
AspLEI	GCGC	2 cut(s)	1359, 2727
AspS9I	GGNCC	7 cut(s)	104, 370, 508, 2476, 3016, 3286, 3558
AsuC2I	CCSGG	4 cut(s)	108, 1342, 1918, 1919
AsuHPI	GGTGA	5 cut(s)	458, 1432, 1626, 2388, 2612
AvaI	CYCGRG	3 cut(s)	1227, 1917, 2848
AvaII	GGWCC	5 cut(s)	508, 2476, 3016, 3286, 3558
AxyI	CCTNAGG	1 cut(s)	222
BaeGI	GKGCMC	2 cut(s)	2995, 3337
BaeI	ACNNNNGTAYC	2 cut(s)	834, 867
BalI	TGGCCA	2 cut(s)	1263, 2336
BanI	GGYRCC	3 cut(s)	1020, 3143, 3278
BanII	GRGCYC	1 cut(s)	1699
BarI	GAAGNNNNNNTAC	2 cut(s)	2610, 2642
BauI	CACGAG	1 cut(s)	1718
BbsI	GAAGAC	4 cut(s)	699, 1919, 2130, 2887
Bbv12I	GWGCWC	5 cut(s)	1167, 1234, 1926, 2995, 3337
BbvCI	CCTCAGC	1 cut(s)	765
BbvI	GCAGC	6 cut(s)	43, 781, 1079, 1088, 1658, 1673
BceAI	ACGGC	3 cut(s)	1085, 1553, 2355
BciT130I	CCWGG	4 cut(s)	1169, 1187, 2474, 3083
BciVI	GTATCC	1 cut(s)	3015
BclI	TGATCA	2 cut(s)	681, 2427
BcnI	CCSGG	4 cut(s)	108, 1342, 1918, 1919
BcoDI	GTCTC	5 cut(s)	306, 569, 713, 2207, 2950
BfaI	CTAG	4 cut(s)	117, 984, 2486, 2720
BfmI	CTRYAG	3 cut(s)	1556, 2115, 2239
BfoI	RGCGCY	1 cut(s)	2728
BfuAI	ACCTGC	1 cut(s)	3346
BfuI	GTATCC	1 cut(s)	3015
BglI	GCCNNNNNGGC	1 cut(s)	2462
BglII	AGATCT	3 cut(s)	1754, 2488, 3135
BisI	GCNGC	7 cut(s)	32, 770, 1068, 1077, 1647, 1662, 3506
BlsI	GCNGC	7 cut(s)	33, 771, 1069, 1078, 1648, 1663, 3507
BmcAI	AGTACT	1 cut(s)	1965
Bme1390I	CCNGG	8 cut(s)	108, 1169, 1187, 1342, 1918, 1919, 2474, 3083
Bme18I	GGWCC	5 cut(s)	508, 2476, 3016, 3286, 3558
BmeT110I	CYCGRG	3 cut(s)	1227, 1917, 2848
BmgT120I	GGNCC	7 cut(s)	104, 370, 508, 2476, 3016, 3286, 3558
BmiI	GGNNCC	9 cut(s)	106, 1022, 1297, 1527, 2145, 3017, 3145, 3280, 3288
BmrFI	CCNGG	8 cut(s)	108, 1169, 1187, 1342, 1918, 1919, 2474, 3083
BmsI	GCATC	4 cut(s)	442, 1933, 2047, 3087
BpiI	GAAGAC	4 cut(s)	699, 1919, 2130, 2887
BpmI	CTGGAG	3 cut(s)	752, 1151, 2220
Bpu10I	CCTNAGC	3 cut(s)	765, 779, 2169
BpuEI	CTTGAG	3 cut(s)	170, 1777, 2948
BpuMI	CCSGG	4 cut(s)	108, 1342, 1918, 1919
Bsa29I	ATCGAT	1 cut(s)	3515
BsaAI	YACGTR	1 cut(s)	1235
BsaBI	GATNNNNATC	1 cut(s)	2874
BsaI	GGTCTC	1 cut(s)	569
BsaJI	CCNNGG	7 cut(s)	75, 106, 1168, 1917, 2022, 2337, 3282
BsaWI	WCCGGW	1 cut(s)	3018
Bsc4I	CCNNNNNNNGG	2 cut(s)	337, 1736
Bse1I	ACTGG	5 cut(s)	1389, 2203, 2565, 2581, 3356
Bse21I	CCTNAGG	1 cut(s)	222
Bse3DI	GCAATG	5 cut(s)	127, 139, 562, 2384, 2694
Bse8I	GATNNNNATC	1 cut(s)	2874
BseAI	TCCGGA	1 cut(s)	3018
BseBI	CCWGG	4 cut(s)	1169, 1187, 2474, 3083
BseCI	ATCGAT	1 cut(s)	3515
BseDI	CCNNGG	7 cut(s)	75, 106, 1168, 1917, 2022, 2337, 3282
BseJI	GATNNNNATC	1 cut(s)	2874
BseLI	CCNNNNNNNGG	2 cut(s)	337, 1736
BseMI	GCAATG	5 cut(s)	127, 139, 562, 2384, 2694
BseMII	CTCAG	8 cut(s)	779, 785, 1861, 2067, 2183, 2295, 2304, 3477
BseNI	ACTGG	5 cut(s)	1389, 2203, 2565, 2581, 3356
BseRI	GAGGAG	1 cut(s)	1841
BseSI	GKGCMC	2 cut(s)	2995, 3337
BseXI	GCAGC	6 cut(s)	43, 781, 1079, 1088, 1658, 1673
BseYI	CCCAGC	1 cut(s)	3012
BsgI	GTGCAG	3 cut(s)	1178, 1700, 2064
Bsh1236I	CGCG	1 cut(s)	1359
BshFI	GGCC	7 cut(s)	105, 155, 371, 1263, 1437, 2027, 2336
BshNI	GGYRCC	3 cut(s)	1020, 3143, 3278
BshVI	ATCGAT	1 cut(s)	3515
BsiHKAI	GWGCWC	5 cut(s)	1167, 1234, 1926, 2995, 3337
BsiHKCI	CYCGRG	3 cut(s)	1227, 1917, 2848
BsiSI	CCGG	4 cut(s)	108, 1341, 1918, 3019
BslFI	GGGAC	3 cut(s)	314, 797, 1357
BslI	CCNNNNNNNGG	2 cut(s)	337, 1736
BsmAI	GTCTC	5 cut(s)	306, 569, 713, 2207, 2950
BsmFI	GGGAC	3 cut(s)	314, 797, 1357
BsmI	GAATGC	5 cut(s)	88, 149, 706, 2628, 2676
BsnI	GGCC	7 cut(s)	105, 155, 371, 1263, 1437, 2027, 2336
Bso31I	GGTCTC	1 cut(s)	569
BsoBI	CYCGRG	3 cut(s)	1227, 1917, 2848
Bsp1286I	GDGCHC	6 cut(s)	1167, 1234, 1699, 1926, 2995, 3337
Bsp13I	TCCGGA	1 cut(s)	3018
Bsp1407I	TGTACA	1 cut(s)	1110
BspACI	CCGC	5 cut(s)	296, 1359, 3114, 3408, 3505
BspANI	GGCC	7 cut(s)	105, 155, 371, 1263, 1437, 2027, 2336
BspCNI	CTCAG	8 cut(s)	778, 786, 1860, 2068, 2182, 2294, 2303, 3478
BspDI	ATCGAT	1 cut(s)	3515
BspEI	TCCGGA	1 cut(s)	3018
BspFNI	CGCG	1 cut(s)	1359
BspHI	TCATGA	2 cut(s)	646, 838
BspLI	GGNNCC	9 cut(s)	106, 1022, 1297, 1527, 2145, 3017, 3145, 3280, 3288
BspMAI	CTGCAG	2 cut(s)	2119, 2243
BspMI	ACCTGC	1 cut(s)	3346
BspPI	GGATC	4 cut(s)	1049, 1197, 1721, 3516
BspT107I	GGYRCC	3 cut(s)	1020, 3143, 3278
BspTNI	GGTCTC	1 cut(s)	569
BsrDI	GCAATG	5 cut(s)	127, 139, 562, 2384, 2694
BsrGI	TGTACA	1 cut(s)	1110
BsrI	ACTGG	5 cut(s)	1389, 2203, 2565, 2581, 3356
BssECI	CCNNGG	7 cut(s)	75, 106, 1168, 1917, 2022, 2337, 3282
BssNAI	GTATAC	1 cut(s)	201
BssSI	CACGAG	1 cut(s)	1718
BssT1I	CCWWGG	2 cut(s)	75, 3282
Bst1107I	GTATAC	1 cut(s)	201
Bst2BI	CACGAG	1 cut(s)	1718
Bst2UI	CCWGG	4 cut(s)	1169, 1187, 2474, 3083
Bst4CI	ACNGT	8 cut(s)	285, 955, 1115, 1560, 1865, 2709, 3182, 3532
Bst6I	CTCTTC	4 cut(s)	1606, 1902, 3233, 3567
BstAPI	GCANNNNNTGC	3 cut(s)	775, 1073, 2390
BstAUI	TGTACA	1 cut(s)	1110
BstBAI	YACGTR	1 cut(s)	1235
BstC8I	GCNNGC	8 cut(s)	86, 1224, 2166, 2239, 2391, 2676, 2729, 3270
BstDSI	CCRYGG	1 cut(s)	2337
BstFNI	CGCG	1 cut(s)	1359
BstH2I	RGCGCY	1 cut(s)	2728
BstHHI	GCGC	2 cut(s)	1359, 2727
BstMAI	GTCTC	5 cut(s)	306, 569, 713, 2207, 2950
BstMWI	GCNNNNNNNGC	8 cut(s)	775, 1073, 1076, 1346, 2390, 2462, 3278, 3551
BstNI	CCWGG	4 cut(s)	1169, 1187, 2474, 3083
BstNSI	RCATGY	2 cut(s)	1201, 3333
BstSCI	CCNGG	8 cut(s)	106, 1167, 1185, 1340, 1916, 1917, 2472, 3081
BstSFI	CTRYAG	3 cut(s)	1556, 2115, 2239
BstSLI	GKGCMC	2 cut(s)	2995, 3337
BstUI	CGCG	1 cut(s)	1359
BstV1I	GCAGC	6 cut(s)	43, 781, 1079, 1088, 1658, 1673
BstV2I	GAAGAC	4 cut(s)	699, 1919, 2130, 2887
BstX2I	RGATCY	5 cut(s)	1189, 1754, 2488, 3135, 3521
BstXI	CCANNNNNNTGG	1 cut(s)	3351
BstYI	RGATCY	5 cut(s)	1189, 1754, 2488, 3135, 3521
BstZ17I	GTATAC	1 cut(s)	201
Bsu15I	ATCGAT	1 cut(s)	3515
Bsu36I	CCTNAGG	1 cut(s)	222
BsuI	GTATCC	1 cut(s)	3015
BsuRI	GGCC	7 cut(s)	105, 155, 371, 1263, 1437, 2027, 2336
BsuTUI	ATCGAT	1 cut(s)	3515
BtgI	CCRYGG	1 cut(s)	2337
BtsI	GCAGTG	4 cut(s)	156, 234, 3051, 3303
BtsIMutI	CAGTG	8 cut(s)	156, 234, 801, 1396, 1870, 2662, 3051, 3303
BveI	ACCTGC	1 cut(s)	3346
Cac8I	GCNNGC	8 cut(s)	86, 1224, 2166, 2239, 2391, 2676, 2729, 3270
CaiI	CAGNNNCTG	3 cut(s)	775, 1192, 2958
CciI	TCATGA	2 cut(s)	646, 838
CfoI	GCGC	2 cut(s)	1359, 2727
Cfr13I	GGNCC	7 cut(s)	104, 370, 508, 2476, 3016, 3286, 3558
Cfr9I	CCCGGG	1 cut(s)	1917
ClaI	ATCGAT	1 cut(s)	3515
CseI	GACGC	2 cut(s)	396, 3573
Csp6I	GTAC	9 cut(s)	1021, 1111, 1201, 1236, 1964, 2738, 2980, 3154, 3256
CspCI	CAANNNNNGTGG	2 cut(s)	568, 603
CviQI	GTAC	9 cut(s)	1021, 1111, 1201, 1236, 1964, 2738, 2980, 3154, 3256
DrdI	GACNNNNNNGTC	1 cut(s)	2942
DseDI	GACNNNNNNGTC	1 cut(s)	2942
EaeI	YGGCCR	2 cut(s)	1261, 2334
Eam1104I	CTCTTC	4 cut(s)	1606, 1902, 3233, 3567
EarI	CTCTTC	4 cut(s)	1606, 1902, 3233, 3567
EciI	GGCGGA	1 cut(s)	3397
Eco130I	CCWWGG	2 cut(s)	75, 3282
Eco24I	GRGCYC	1 cut(s)	1699
Eco31I	GGTCTC	1 cut(s)	569
Eco47I	GGWCC	5 cut(s)	508, 2476, 3016, 3286, 3558
Eco57I	CTGAAG	1 cut(s)	1476
Eco81I	CCTNAGG	1 cut(s)	222
Eco88I	CYCGRG	3 cut(s)	1227, 1917, 2848
EcoO109I	RGGNCCY	3 cut(s)	104, 370, 2476
EcoRI	GAATTC	1 cut(s)	2440
EcoRII	CCWGG	4 cut(s)	1167, 1185, 2472, 3081
EcoT14I	CCWWGG	2 cut(s)	75, 3282
EcoT38I	GRGCYC	1 cut(s)	1699
ErhI	CCWWGG	2 cut(s)	75, 3282
FalI	AAGNNNNNCTT	6 cut(s)	59, 91, 357, 389, 2115, 2147
FaqI	GGGAC	3 cut(s)	314, 797, 1357
FauI	CCCGC	1 cut(s)	3107
FauNDI	CATATG	2 cut(s)	1621, 3498
FbaI	TGATCA	2 cut(s)	681, 2427
FblI	GTMKAC	3 cut(s)	200, 918, 950
Fnu4HI	GCNGC	7 cut(s)	32, 770, 1068, 1077, 1647, 1662, 3506
FriOI	GRGCYC	1 cut(s)	1699
Fsp4HI	GCNGC	7 cut(s)	32, 770, 1068, 1077, 1647, 1662, 3506
FspBI	CTAG	4 cut(s)	117, 984, 2486, 2720
GlaI	GCGC	2 cut(s)	1358, 2726
GluI	GCNGC	7 cut(s)	32, 770, 1068, 1077, 1647, 1662, 3506
GsaI	CCCAGC	1 cut(s)	3016
GsuI	CTGGAG	3 cut(s)	752, 1151, 2220
HaeII	RGCGCY	1 cut(s)	2728
HaeIII	GGCC	7 cut(s)	105, 155, 371, 1263, 1437, 2027, 2336
HapII	CCGG	4 cut(s)	108, 1341, 1918, 3019
HgaI	GACGC	2 cut(s)	396, 3573
HhaI	GCGC	2 cut(s)	1359, 2727
Hin6I	GCGC	2 cut(s)	1357, 2725
HinP1I	GCGC	2 cut(s)	1357, 2725
HincII	GTYRAC	1 cut(s)	3178
HindII	GTYRAC	1 cut(s)	3178
HindIII	AAGCTT	1 cut(s)	2162
HpaII	CCGG	4 cut(s)	108, 1341, 1918, 3019
HphI	GGTGA	5 cut(s)	458, 1432, 1626, 2388, 2612
Hpy166II	GTNNAC	6 cut(s)	201, 919, 951, 2993, 3178, 3335
Hpy8I	GTNNAC	6 cut(s)	201, 919, 951, 2993, 3178, 3335
Hpy99I	CGWCG	1 cut(s)	390
HpyCH4III	ACNGT	8 cut(s)	285, 955, 1115, 1560, 1865, 2709, 3182, 3532
HpyCH4IV	ACGT	3 cut(s)	1234, 1593, 2892
HpyF10VI	GCNNNNNNNGC	8 cut(s)	775, 1073, 1076, 1346, 2390, 2462, 3278, 3551
HpySE526I	ACGT	3 cut(s)	1234, 1593, 2892
HspAI	GCGC	2 cut(s)	1357, 2725
Kpn2I	TCCGGA	1 cut(s)	3018
KpnI	GGTACC	1 cut(s)	1024
Ksp22I	TGATCA	2 cut(s)	681, 2427
LmnI	GCTCC	3 cut(s)	1170, 1525, 1921
Lsp1109I	GCAGC	6 cut(s)	43, 781, 1079, 1088, 1658, 1673
LweI	GCATC	4 cut(s)	442, 1933, 2047, 3087
MaeI	CTAG	4 cut(s)	117, 984, 2486, 2720
MaeII	ACGT	3 cut(s)	1234, 1593, 2892
MfeI	CAATTG	3 cut(s)	2595, 2700, 3159
MflI	RGATCY	5 cut(s)	1189, 1754, 2488, 3135, 3521
MhlI	GDGCHC	6 cut(s)	1167, 1234, 1699, 1926, 2995, 3337
MlsI	TGGCCA	2 cut(s)	1263, 2336
MluNI	TGGCCA	2 cut(s)	1263, 2336
MlyI	GAGTC	2 cut(s)	736, 779
Mox20I	TGGCCA	2 cut(s)	1263, 2336
MroI	TCCGGA	1 cut(s)	3018
MroXI	GAANNNNTTC	1 cut(s)	1615
MscI	TGGCCA	2 cut(s)	1263, 2336
MseI	TTAA	8 cut(s)	1158, 1301, 1469, 1482, 1929, 2007, 2181, 2571
MslI	CAYNNNNRTG	3 cut(s)	132, 567, 1536
Msp20I	TGGCCA	2 cut(s)	1263, 2336
MspA1I	CMGCKG	2 cut(s)	298, 3268
MspI	CCGG	4 cut(s)	108, 1341, 1918, 3019
MspR9I	CCNGG	8 cut(s)	108, 1169, 1187, 1342, 1918, 1919, 2474, 3083
MunI	CAATTG	3 cut(s)	2595, 2700, 3159
Mva1269I	GAATGC	5 cut(s)	88, 149, 706, 2628, 2676
MvaI	CCWGG	4 cut(s)	1169, 1187, 2474, 3083
MvnI	CGCG	1 cut(s)	1359
MwoI	GCNNNNNNNGC	8 cut(s)	775, 1073, 1076, 1346, 2390, 2462, 3278, 3551
NciI	CCSGG	4 cut(s)	108, 1342, 1918, 1919
NdeI	CATATG	2 cut(s)	1621, 3498
NlaIV	GGNNCC	9 cut(s)	106, 1022, 1297, 1527, 2145, 3017, 3145, 3280, 3288
NmeAIII	GCCGAG	1 cut(s)	290
NmuCI	GTSAC	4 cut(s)	1420, 2690, 3049, 3376
NspI	RCATGY	2 cut(s)	1201, 3333
PaeR7I	CTCGAG	1 cut(s)	1227
PagI	TCATGA	2 cut(s)	646, 838
PaqCI	CACCTGC	1 cut(s)	3346
PciI	ACATGT	1 cut(s)	1197
PctI	GAATGC	5 cut(s)	88, 149, 706, 2628, 2676
PdmI	GAANNNNTTC	1 cut(s)	1615
PflFI	GACNNNGTC	1 cut(s)	1865
PfoI	TCCNGGA	1 cut(s)	2472
PkrI	GCNGC	7 cut(s)	33, 771, 1069, 1078, 1648, 1663, 3507
PleI	GAGTC	2 cut(s)	735, 779
PpsI	GAGTC	2 cut(s)	735, 779
Ppu21I	YACGTR	1 cut(s)	1235
PpuMI	RGGWCCY	1 cut(s)	2476
PscI	ACATGT	1 cut(s)	1197
PshBI	ATTAAT	1 cut(s)	1469
Psp5II	RGGWCCY	1 cut(s)	2476
Psp6I	CCWGG	4 cut(s)	1167, 1185, 2472, 3081
PspFI	CCCAGC	1 cut(s)	3012
PspGI	CCWGG	4 cut(s)	1167, 1185, 2472, 3081
PspN4I	GGNNCC	9 cut(s)	106, 1022, 1297, 1527, 2145, 3017, 3145, 3280, 3288
PspPI	GGNCC	7 cut(s)	104, 370, 508, 2476, 3016, 3286, 3558
PspPPI	RGGWCCY	1 cut(s)	2476
PspXI	VCTCGAGB	1 cut(s)	1227
PstI	CTGCAG	2 cut(s)	2119, 2243
PstNI	CAGNNNCTG	3 cut(s)	775, 1192, 2958
PsuI	RGATCY	5 cut(s)	1189, 1754, 2488, 3135, 3521
PsyI	GACNNNGTC	1 cut(s)	1865
PvuII	CAGCTG	1 cut(s)	3268
RsaI	GTAC	9 cut(s)	1022, 1112, 1202, 1237, 1965, 2739, 2981, 3155, 3257
RsaNI	GTAC	9 cut(s)	1021, 1111, 1201, 1236, 1964, 2738, 2980, 3154, 3256
RseI	CAYNNNNRTG	3 cut(s)	132, 567, 1536
SaqAI	TTAA	8 cut(s)	1158, 1301, 1469, 1482, 1929, 2007, 2181, 2571
SatI	GCNGC	7 cut(s)	32, 770, 1068, 1077, 1647, 1662, 3506
Sau96I	GGNCC	7 cut(s)	104, 370, 508, 2476, 3016, 3286, 3558
ScaI	AGTACT	1 cut(s)	1965
SchI	GAGTC	2 cut(s)	736, 779
ScrFI	CCNGG	8 cut(s)	108, 1169, 1187, 1342, 1918, 1919, 2474, 3083
SduI	GDGCHC	6 cut(s)	1167, 1234, 1699, 1926, 2995, 3337
SfaNI	GCATC	4 cut(s)	442, 1933, 2047, 3087
SfcI	CTRYAG	3 cut(s)	1556, 2115, 2239
Sfr274I	CTCGAG	1 cut(s)	1227
SinI	GGWCC	5 cut(s)	508, 2476, 3016, 3286, 3558
SlaI	CTCGAG	1 cut(s)	1227
SmaI	CCCGGG	1 cut(s)	1919
SmiMI	CAYNNNNRTG	3 cut(s)	132, 567, 1536
SmlI	CTYRAG	4 cut(s)	149, 1227, 1792, 2963
SmoI	CTYRAG	4 cut(s)	149, 1227, 1792, 2963
SsiI	CCGC	5 cut(s)	296, 1359, 3114, 3408, 3505
SspI	AATATT	2 cut(s)	643, 2227
SspMI	CTAG	4 cut(s)	117, 984, 2486, 2720
StyD4I	CCNGG	8 cut(s)	106, 1167, 1185, 1340, 1916, 1917, 2472, 3081
StyI	CCWWGG	2 cut(s)	75, 3282
TaaI	ACNGT	8 cut(s)	285, 955, 1115, 1560, 1865, 2709, 3182, 3532
TaiI	ACGT	3 cut(s)	1237, 1596, 2895
TatI	WGTACW	4 cut(s)	1110, 1200, 1963, 3153
TauI	GCSGC	1 cut(s)	3508
Tru1I	TTAA	8 cut(s)	1158, 1301, 1469, 1482, 1929, 2007, 2181, 2571
Tru9I	TTAA	8 cut(s)	1158, 1301, 1469, 1482, 1929, 2007, 2181, 2571
TscAI	CASTG	8 cut(s)	163, 234, 808, 1396, 1870, 2662, 3058, 3310
TseFI	GTSAC	4 cut(s)	1420, 2690, 3049, 3376
TseI	GCWGC	6 cut(s)	31, 769, 1067, 1076, 1646, 1661
Tsp45I	GTSAC	4 cut(s)	1420, 2690, 3049, 3376
TspMI	CCCGGG	1 cut(s)	1917
TspRI	CASTG	8 cut(s)	163, 234, 808, 1396, 1870, 2662, 3058, 3310
Tth111I	GACNNNGTC	1 cut(s)	1865
VneI	GTGCAC	2 cut(s)	2991, 3333
VpaK11BI	GGWCC	5 cut(s)	508, 2476, 3016, 3286, 3558
VspI	ATTAAT	1 cut(s)	1469
XapI	RAATTY	5 cut(s)	256, 449, 1682, 2092, 2440
XbaI	TCTAGA	3 cut(s)	116, 2485, 2719
XceI	RCATGY	2 cut(s)	1201, 3333
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3272
XhoI	CTCGAG	1 cut(s)	1227
XmaI	CCCGGG	1 cut(s)	1917
XmiI	GTMKAC	3 cut(s)	200, 918, 950
XmnI	GAANNNNTTC	1 cut(s)	1615
XspI	CTAG	4 cut(s)	117, 984, 2486, 2720
ZrmI	AGTACT	1 cut(s)	1965

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.