Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005243

Physical Location & Seq

Genomic Coordinates Reverse (-)

16512170 .. 16517781

Gene Structure 5612 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G45130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGTGGAGGTTAAAGTTATCGGAAGGAGACGAAGAGAGCGTGAATCAACATGTTGGAAGACAGTTTTGGGAATATGATAACCAATTTGGAACCTCTGAAGAGAGACATCACATTAACCATCTTCGTAGCAACTTTACTCTCAATCGGTTTTCTTCTAAGCATAGTTCTGATCTTCTCTACCGTTTTCAGTGTTGGAAAGAGAAAGGAAAAGGAATGGAGAGACTTCCACAAGTGAAAGTAAAAGAGGGGGAAGAAAGATTGATAAATGAAGAAGTGGTGAATGTTACATTAAGAAGAAGTTTGAGATTCTACTCAATACTTCAATCACAAGATGGTTTTTGGCCTGGTGATTATGGTGGCCCTTTGTTTCTCTTGCCTGCTCTGGTGATCGGCTTATATGTGACGGAAGTTTTGGATGGAACTTTAACTGCGCAACATCAAATCGAGATTCGTCGTTATCTCTATAACCATCAGAACAAGGATGGAGGATGGGGACTACACGTAGAAGGGAATAGCACCATGTTTTGTACAGTGCTCTCATACGTAGCACTGAGACTAATGGGGGAAGAATTAGACGGTGGAGATGGAGCCATGGAATCAGCTAGAAGTTGGATTCACCACCACGGTGGTGCCACTTTTATTCCCTCCTGGGGCAAGTTCTGGCTCTCCGTTCTTGGAGCTTATGAGTGGAGTGGGAACAATCCTTTACCTCCAGAGCTATGGCTCCTTCCATATAGTCTTCCTTTTCATCCGGGCCGAATGTGGTGCCATTGTAGGATGGTTTATCTTCCAATGTCATATCTATATGGAAGAAGATTTGTTTGTCGTACTAATGGAACTATTTTATCGCTTCGACGAGAGCTCTACACTATTCCTTATCACCATATCGATTGGGACACCGCCCGTAATCAATGTGCCAAGGAGGACTTGTACTATCCACATCCAAAGATTCAAGACGTCCTTTGGAGTTGTCTGAATAAATTTGGAGAGCCTCTTCTTGAAAGATGGCCATTGAATAACCTCAGAAACCATGCTCTTCAGACAGTAATGCAACACATTCACTATGAAGACCAAAACAGCCACTATATTTGTATCGGTCCTGTCAACAAAGTCTTGAATATGCTTTGTTGTTGGGTCGAGTCCTCGAATTCCGAGGCATTTAAATCTCACCTCTCGCGGATTAAAGACTATTTGTGGGTGGCTGAGGATGGAATGAAAATGCAGGGATACAACGGATCTCAGCTGTGGGACGTGACTTTAGCGGTCCAAGCAATCTTGGCGACGAATTTGGTTGATGACTATGGTTTGATGCTTAAGAAAGCCCATAACTACATCAAGAACACTCAAATAAGGAAAGACACAAGTGGAGATCCGGGGTTGTGGTACCGACACCCGTGCAAGGGAGGATGGGGTTTCTCCACTGGAGACAATCCATGGCCTGTCTCTGATTGTACTGCTGAAGCCTTGAAGGCGGCGTTGCTATTGTCACAAATGCCGGTTAATTTAGTTGGAGAACCCATGCCTGAAGAGCATTTAGTTGATGCTGTAAACTTTATCTTATCATTACAGAACAAGAATGGGGGATTTGCGTCATATGAGCTAACTAGATCATATCCCGAGCTAGAGGTTATCAACCCATCAGAGACTTTTGGGGATATCATCATAGATTATCAATACGTAGAATGCACGTCAGCTGCCATCCAAGGTCTCGTGTTATTCACAACGTTAAATTCGAGCTACAAGAGGAAGGAGATAGTAGGAAGCATCAACAAAGCAGTTGAGTTTATTGAAAAAACACAACTTCCTGATGGTTCATGGTATGGCTCGTGGGGAGTGTGTTTCACCTATGCAACATGGTTTGGTATTAAAGGCATGTTGGCTTCAGGCAAAACATATGAGAGCAGTCTTTGTATTAGAAAAGCTTGTGGTTTCTTGCTCTCCAAACAACTTTGTTGTGGTGGATGGGGAGAGAGCTACCTTTCTTGCCAAAACAAAGTATACACCAATCTTCCTGGGAATAAATCGCATATTGTGAACACATCATGGGCACTCTTGGCTCTCATTGAAGCGGGACAAGCTAGTAGAGATCCGATGCCATTGCATCGCGGGGCAAAATCGCTGATCAACTCGCAGATGGAAGATGGAGATTACCCACAACAAGAGATACTAGGAGTCTTTAATCGGAATTGTATGATCAGTTACTCAGCTTATAGAAACATATTCCCCATTTGGGCTCTTGGAGAATACCGCAAACTCATGTTGTCTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000250 GO:0003674 GO:0003824 GO:0016853 GO:0016866 GO:0031559

KEGG Pathways

Metabolic & Signaling

ko00100 ko01100 ko01110 ko01130 map00100 map01100 map01110 map01130

Pfam Domains

Protein Families

Prenyltrans SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

756

Amino Acids

86.52

Weight (kDa)

6.52

Isoelectric Point (pI)

47.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SQHop_cyclase_N	PF13249	107 - 401	2e-41	Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C	PF13243	413 - 751	1.3e-50	Squalene-hopene cyclase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45130 AT3G45130 AT3G45130 AT3G45130 AT3G45130
fragaria_vesca	FvH4_4g06000
malus_domestica	MD16G1237700.v1.1
prunus_persica	Prupe.1G063500_v2.0.a1 Prupe.1G063500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr0c45g0503831 RchiOBHm_Chr1g0332701 RchiOBHm_Chr4g0397241 RchiOBHm_Chr4g0397271 RchiOBHm_Chr4g0397301 RchiOBHm_Chr4g0397321
rosa_laevigata	RLG00000009434 RLG00000009437
rosa_multiflora	Rmu_sc0003239.1_g000001 Rmu_sc0003929.1_g000015 Rmu_sc0008546.1_g000001
rosa_roxburghii	Rroxscaffold_5G00342180 Rroxscaffold_5G00342240 Rroxscaffold_5G00342320
rosa_rugosa	Rorug03G0343000 Rorug03G0343900 Rorug03G0343900
rosa_wichuraiana	Rw4G006330 Rw4G006340 Rw4G006360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	960
Acc16I	TGCGCA	1 cut(s)	432
Acc65I	GGTACC	1 cut(s)	1383
AccB1I	GGYRCC	3 cut(s)	629, 765, 1383
AccI	GTMKAC	1 cut(s)	1998
AccII	CGCG	2 cut(s)	1177, 2106
AciI	CCGC	7 cut(s)	900, 1177, 1262, 1472, 2069, 2106, 2248
AclI	AACGTT	1 cut(s)	1724
AclWI	GGATC	3 cut(s)	1243, 1364, 2081
AcoI	YGGCCR	1 cut(s)	1007
AcsI	RAATTY	4 cut(s)	980, 1147, 1285, 1729
AcuI	CTGAAG	5 cut(s)	117, 1022, 1479, 1545, 1866
AcyI	GRCGYC	1 cut(s)	957
AfaI	GTAC	5 cut(s)	529, 829, 932, 1385, 1453
AfiI	CCNNNNNNNGG	4 cut(s)	650, 1399, 1400, 2230
AflII	CTTAAG	1 cut(s)	1313
AflIII	ACRYGT	2 cut(s)	49, 499
AgsI	TTSAA	8 cut(s)	323, 953, 1001, 1015, 1117, 1468, 1790, 2066
AjiI	CACGTC	2 cut(s)	1252, 1689
AjnI	CCWGG	3 cut(s)	343, 647, 2011
AjuI	GAANNNNNNNTTGG	2 cut(s)	49, 81
AleI	CACNNNNGTG	2 cut(s)	624, 627
Alw21I	GWGCWC	2 cut(s)	537, 864
Alw26I	GTCTC	8 cut(s)	21, 97, 214, 547, 1419, 1447, 1637, 1712
AlwI	GGATC	3 cut(s)	1243, 1364, 2081
Ama87I	CYCGRG	1 cut(s)	1616
AoxI	GGCC	5 cut(s)	341, 358, 754, 1007, 1436
ApeKI	GCWGC	1 cut(s)	1694
ApoI	RAATTY	4 cut(s)	980, 1147, 1285, 1729
ArsI	GACNNNNNNTTYG	2 cut(s)	394, 426
Asp718I	GGTACC	1 cut(s)	1383
AspLEI	GCGC	1 cut(s)	433
AspS9I	GGNCC	4 cut(s)	359, 754, 1097, 1264
AsuC2I	CCSGG	2 cut(s)	753, 1374
AsuHPI	GGTGA	7 cut(s)	289, 359, 397, 608, 872, 1160, 1834
AvaI	CYCGRG	1 cut(s)	1616
AvaII	GGWCC	2 cut(s)	1097, 1264
BaeGI	GKGCMC	1 cut(s)	2050
BalI	TGGCCA	1 cut(s)	1009
BanI	GGYRCC	3 cut(s)	629, 765, 1383
BanII	GRGCYC	2 cut(s)	864, 2236
BauI	CACGAG	2 cut(s)	1709, 1825
BbsI	GAAGAC	3 cut(s)	64, 731, 1074
Bbv12I	GWGCWC	2 cut(s)	537, 864
BbvCI	CCTCAGC	1 cut(s)	1203
BbvI	GCAGC	1 cut(s)	1681
BcgI	CGANNNNNNTGC	6 cut(s)	747, 781, 1377, 1411, 2080, 2114
BciT130I	CCWGG	3 cut(s)	345, 649, 2013
BciVI	GTATCC	1 cut(s)	1220
BclI	TGATCA	2 cut(s)	2121, 2193
BcnI	CCSGG	2 cut(s)	753, 1374
BcoDI	GTCTC	8 cut(s)	21, 97, 214, 547, 1419, 1447, 1637, 1712
BfaI	CTAG	5 cut(s)	603, 1605, 1622, 2079, 2168
BfrI	CTTAAG	1 cut(s)	1313
BfuI	GTATCC	1 cut(s)	1220
BglI	GCCNNNNNGGC	1 cut(s)	1469
BisI	GCNGC	2 cut(s)	1473, 1695
BlsI	GCNGC	2 cut(s)	1474, 1696
Bme1390I	CCNGG	5 cut(s)	345, 649, 753, 1374, 2013
Bme18I	GGWCC	2 cut(s)	1097, 1264
BmeT110I	CYCGRG	1 cut(s)	1616
BmgBI	CACGTC	2 cut(s)	1252, 1689
BmgT120I	GGNCC	4 cut(s)	359, 754, 1097, 1264
BmiI	GGNNCC	6 cut(s)	91, 589, 631, 725, 767, 1385
BmrFI	CCNGG	5 cut(s)	345, 649, 753, 1374, 2013
BmsI	GCATC	5 cut(s)	1299, 1531, 1773, 2082, 2110
BpiI	GAAGAC	3 cut(s)	64, 731, 1074
BpmI	CTGGAG	2 cut(s)	696, 1443
Bpu10I	CCTNAGC	1 cut(s)	1203
BpuMI	CCSGG	2 cut(s)	753, 1374
Bsa29I	ATCGAT	1 cut(s)	888
BsaAI	YACGTR	3 cut(s)	502, 544, 1678
BsaHI	GRCGYC	1 cut(s)	957
BsaI	GGTCTC	1 cut(s)	1712
BsaJI	CCNNGG	9 cut(s)	591, 622, 648, 918, 1152, 1373, 1433, 1702, 2012
BsaXI	ACNNNNNCTCC	2 cut(s)	914, 944
Bsc4I	CCNNNNNNNGG	4 cut(s)	650, 1399, 1400, 2230
Bse118I	RCCGGY	1 cut(s)	1495
Bse1I	ACTGG	1 cut(s)	1426
Bse3DI	GCAATG	1 cut(s)	2096
BseBI	CCWGG	3 cut(s)	345, 649, 2013
BseCI	ATCGAT	1 cut(s)	888
BseDI	CCNNGG	9 cut(s)	591, 622, 648, 918, 1152, 1373, 1433, 1702, 2012
BseLI	CCNNNNNNNGG	4 cut(s)	650, 1399, 1400, 2230
BseMI	GCAATG	1 cut(s)	2096
BseMII	CTCAG	5 cut(s)	542, 1036, 1194, 1253, 2217
BseNI	ACTGG	1 cut(s)	1426
BseSI	GKGCMC	1 cut(s)	2050
BseXI	GCAGC	1 cut(s)	1681
Bsh1236I	CGCG	2 cut(s)	1177, 2106
BshFI	GGCC	5 cut(s)	343, 360, 756, 1009, 1438
BshNI	GGYRCC	3 cut(s)	629, 765, 1383
BshVI	ATCGAT	1 cut(s)	888
BsiHKAI	GWGCWC	2 cut(s)	537, 864
BsiHKCI	CYCGRG	1 cut(s)	1616
BsiSI	CCGG	3 cut(s)	752, 1373, 1496
BslFI	GGGAC	4 cut(s)	507, 908, 1262, 2085
BslI	CCNNNNNNNGG	4 cut(s)	650, 1399, 1400, 2230
BsmAI	GTCTC	8 cut(s)	21, 97, 214, 547, 1419, 1447, 1637, 1712
BsmBI	CGTCTC	1 cut(s)	21
BsmFI	GGGAC	4 cut(s)	507, 908, 1262, 2085
BsmI	GAATGC	1 cut(s)	1688
BsnI	GGCC	5 cut(s)	343, 360, 756, 1009, 1438
Bso31I	GGTCTC	1 cut(s)	1712
BsoBI	CYCGRG	1 cut(s)	1616
Bsp1286I	GDGCHC	4 cut(s)	537, 864, 2050, 2236
Bsp1407I	TGTACA	1 cut(s)	527
Bsp143I	GATC	8 cut(s)	169, 387, 1235, 1369, 1607, 2086, 2121, 2193
Bsp19I	CCATGG	2 cut(s)	591, 1433
BspACI	CCGC	7 cut(s)	900, 1177, 1262, 1472, 2069, 2106, 2248
BspANI	GGCC	5 cut(s)	343, 360, 756, 1009, 1438
BspCNI	CTCAG	5 cut(s)	543, 1035, 1195, 1252, 2216
BspDI	ATCGAT	1 cut(s)	888
BspFNI	CGCG	2 cut(s)	1177, 2106
BspLI	GGNNCC	6 cut(s)	91, 589, 631, 725, 767, 1385
BspPI	GGATC	3 cut(s)	1243, 1364, 2081
BspQI	GCTCTTC	2 cut(s)	1041, 1521
BspT107I	GGYRCC	3 cut(s)	629, 765, 1383
BspTI	CTTAAG	1 cut(s)	1313
BspTNI	GGTCTC	1 cut(s)	1712
BsrDI	GCAATG	1 cut(s)	2096
BsrFI	RCCGGY	1 cut(s)	1495
BsrGI	TGTACA	1 cut(s)	527
BsrI	ACTGG	1 cut(s)	1426
BssAI	RCCGGY	1 cut(s)	1495
BssECI	CCNNGG	9 cut(s)	591, 622, 648, 918, 1152, 1373, 1433, 1702, 2012
BssMI	GATC	8 cut(s)	169, 387, 1235, 1369, 1607, 2086, 2121, 2193
BssNAI	GTATAC	1 cut(s)	1999
BssNI	GRCGYC	1 cut(s)	957
BssSI	CACGAG	2 cut(s)	1709, 1825
BssT1I	CCWWGG	4 cut(s)	591, 918, 1433, 1702
Bst1107I	GTATAC	1 cut(s)	1999
Bst2BI	CACGAG	2 cut(s)	1709, 1825
Bst2UI	CCWGG	3 cut(s)	345, 649, 2013
Bst4CI	ACNGT	6 cut(s)	63, 182, 532, 578, 626, 1045
Bst6I	CTCTTC	5 cut(s)	27, 93, 999, 1041, 1521
BstACI	GRCGYC	1 cut(s)	957
BstAFI	CTTAAG	1 cut(s)	1313
BstAUI	TGTACA	1 cut(s)	527
BstBAI	YACGTR	3 cut(s)	502, 544, 1678
BstC8I	GCNNGC	1 cut(s)	378
BstDEI	CTNAG	6 cut(s)	156, 551, 1022, 1203, 1239, 2203
BstDSI	CCRYGG	3 cut(s)	591, 622, 1433
BstFNI	CGCG	2 cut(s)	1177, 2106
BstHHI	GCGC	1 cut(s)	433
BstKTI	GATC	8 cut(s)	172, 390, 1238, 1372, 1610, 2089, 2124, 2196
BstMAI	GTCTC	8 cut(s)	21, 97, 214, 547, 1419, 1447, 1637, 1712
BstMBI	GATC	8 cut(s)	169, 387, 1235, 1369, 1607, 2086, 2121, 2193
BstMWI	GCNNNNNNNGC	6 cut(s)	1268, 1277, 1469, 1528, 2054, 2075
BstNI	CCWGG	3 cut(s)	345, 649, 2013
BstNSI	RCATGY	2 cut(s)	53, 1876
BstSCI	CCNGG	5 cut(s)	343, 647, 751, 1372, 2011
BstSLI	GKGCMC	1 cut(s)	2050
BstSNI	TACGTA	2 cut(s)	544, 1678
BstUI	CGCG	2 cut(s)	1177, 2106
BstV1I	GCAGC	1 cut(s)	1681
BstV2I	GAAGAC	3 cut(s)	64, 731, 1074
BstX2I	RGATCY	3 cut(s)	1235, 1369, 2086
BstXI	CCANNNNNNTGG	2 cut(s)	626, 720
BstYI	RGATCY	3 cut(s)	1235, 1369, 2086
BstZ17I	GTATAC	1 cut(s)	1999
Bsu15I	ATCGAT	1 cut(s)	888
BsuI	GTATCC	1 cut(s)	1220
BsuRI	GGCC	5 cut(s)	343, 360, 756, 1009, 1438
BsuTUI	ATCGAT	1 cut(s)	888
BtgI	CCRYGG	3 cut(s)	591, 622, 1433
BtgZI	GCGATG	1 cut(s)	2087
BtrI	CACGTC	2 cut(s)	1252, 1689
BtsIMutI	CAGTG	4 cut(s)	194, 537, 548, 1419
Cac8I	GCNNGC	1 cut(s)	378
CfoI	GCGC	1 cut(s)	433
Cfr10I	RCCGGY	1 cut(s)	1495
Cfr13I	GGNCC	4 cut(s)	359, 754, 1097, 1264
ClaI	ATCGAT	1 cut(s)	888
CseI	GACGC	1 cut(s)	1578
Csp6I	GTAC	5 cut(s)	528, 828, 931, 1384, 1452
CspCI	CAANNNNNGTGG	2 cut(s)	1070, 1105
CviQI	GTAC	5 cut(s)	528, 828, 931, 1384, 1452
DdeI	CTNAG	6 cut(s)	156, 551, 1022, 1203, 1239, 2203
DpnI	GATC	8 cut(s)	171, 389, 1237, 1371, 1609, 2088, 2123, 2195
DpnII	GATC	8 cut(s)	169, 387, 1235, 1369, 1607, 2086, 2121, 2193
DraI	TTTAAA	1 cut(s)	1162
EaeI	YGGCCR	1 cut(s)	1007
Eam1104I	CTCTTC	5 cut(s)	27, 93, 999, 1041, 1521
EarI	CTCTTC	5 cut(s)	27, 93, 999, 1041, 1521
Ecl136II	GAGCTC	1 cut(s)	862
Eco105I	TACGTA	2 cut(s)	544, 1678
Eco130I	CCWWGG	4 cut(s)	591, 918, 1433, 1702
Eco24I	GRGCYC	2 cut(s)	864, 2236
Eco31I	GGTCTC	1 cut(s)	1712
Eco32I	GATATC	1 cut(s)	1657
Eco47I	GGWCC	2 cut(s)	1097, 1264
Eco53kI	GAGCTC	1 cut(s)	862
Eco57I	CTGAAG	5 cut(s)	117, 1022, 1479, 1545, 1866
Eco88I	CYCGRG	1 cut(s)	1616
EcoICRI	GAGCTC	1 cut(s)	862
EcoRI	GAATTC	1 cut(s)	1147
EcoRII	CCWGG	3 cut(s)	343, 647, 2011
EcoRV	GATATC	1 cut(s)	1657
EcoT14I	CCWWGG	4 cut(s)	591, 918, 1433, 1702
EcoT38I	GRGCYC	2 cut(s)	864, 2236
ErhI	CCWWGG	4 cut(s)	591, 918, 1433, 1702
Esp3I	CGTCTC	1 cut(s)	21
FalI	AAGNNNNNCTT	4 cut(s)	911, 943, 945, 977
FaqI	GGGAC	4 cut(s)	507, 908, 1262, 2085
FauI	CCCGC	2 cut(s)	2062, 2099
FauNDI	CATATG	2 cut(s)	1594, 1894
FbaI	TGATCA	2 cut(s)	2121, 2193
FblI	GTMKAC	1 cut(s)	1998
Fnu4HI	GCNGC	2 cut(s)	1473, 1695
FriOI	GRGCYC	2 cut(s)	864, 2236
Fsp4HI	GCNGC	2 cut(s)	1473, 1695
FspBI	CTAG	5 cut(s)	603, 1605, 1622, 2079, 2168
FspI	TGCGCA	1 cut(s)	432
GlaI	GCGC	1 cut(s)	432
GluI	GCNGC	2 cut(s)	1473, 1695
GsuI	CTGGAG	2 cut(s)	696, 1443
HaeIII	GGCC	5 cut(s)	343, 360, 756, 1009, 1438
HapII	CCGG	3 cut(s)	752, 1373, 1496
HgaI	GACGC	1 cut(s)	1578
HhaI	GCGC	1 cut(s)	433
Hin1I	GRCGYC	1 cut(s)	957
Hin6I	GCGC	1 cut(s)	431
HinP1I	GCGC	1 cut(s)	431
HincII	GTYRAC	1 cut(s)	1105
HindII	GTYRAC	1 cut(s)	1105
HindIII	AAGCTT	1 cut(s)	1920
HinfI	GANTC	8 cut(s)	43, 306, 448, 596, 613, 949, 1139, 2172
HpaII	CCGG	3 cut(s)	752, 1373, 1496
HphI	GGTGA	7 cut(s)	289, 359, 397, 608, 872, 1160, 1834
Hpy166II	GTNNAC	4 cut(s)	1105, 1549, 1999, 2035
Hpy188III	TCNNGA	8 cut(s)	445, 713, 953, 998, 1114, 1336, 1616, 1805
Hpy8I	GTNNAC	4 cut(s)	1105, 1549, 1999, 2035
Hpy99I	CGWCG	3 cut(s)	456, 858, 1285
HpyAV	CCTTC	5 cut(s)	17, 500, 737, 1462, 1741
HpyCH4III	ACNGT	6 cut(s)	63, 182, 532, 578, 626, 1045
HpyCH4IV	ACGT	7 cut(s)	501, 543, 957, 1251, 1677, 1688, 1724
HpyCH4V	TGCA	6 cut(s)	1051, 1222, 1398, 1686, 1850, 2101
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1268, 1277, 1469, 1528, 2054, 2075
HpyF3I	CTNAG	6 cut(s)	156, 551, 1022, 1203, 1239, 2203
HpySE526I	ACGT	7 cut(s)	501, 543, 957, 1251, 1677, 1688, 1724
Hsp92I	GRCGYC	1 cut(s)	957
HspAI	GCGC	1 cut(s)	431
KpnI	GGTACC	1 cut(s)	1387
Ksp22I	TGATCA	2 cut(s)	2121, 2193
Kzo9I	GATC	8 cut(s)	169, 387, 1235, 1369, 1607, 2086, 2121, 2193
LguI	GCTCTTC	2 cut(s)	1041, 1521
LmnI	GCTCC	3 cut(s)	587, 677, 729
Lsp1109I	GCAGC	1 cut(s)	1681
LweI	GCATC	5 cut(s)	1299, 1531, 1773, 2082, 2110
MaeI	CTAG	5 cut(s)	603, 1605, 1622, 2079, 2168
MaeII	ACGT	7 cut(s)	501, 543, 957, 1251, 1677, 1688, 1724
MaeIII	GTNAC	5 cut(s)	283, 400, 1252, 1485, 2198
MalI	GATC	8 cut(s)	171, 389, 1237, 1371, 1609, 2088, 2123, 2195
MboI	GATC	8 cut(s)	169, 387, 1235, 1369, 1607, 2086, 2121, 2193
MflI	RGATCY	3 cut(s)	1235, 1369, 2086
MhlI	GDGCHC	4 cut(s)	537, 864, 2050, 2236
MlsI	TGGCCA	1 cut(s)	1009
MluCI	AATT	8 cut(s)	83, 569, 980, 1147, 1285, 1501, 1729, 2185
MluNI	TGGCCA	1 cut(s)	1009
MlyI	GAGTC	2 cut(s)	1148, 2181
MmeI	TCCRAC	4 cut(s)	34, 173, 590, 1489
Mox20I	TGGCCA	1 cut(s)	1009
MscI	TGGCCA	1 cut(s)	1009
MslI	CAYNNNNRTG	2 cut(s)	624, 627
Msp20I	TGGCCA	1 cut(s)	1009
MspA1I	CMGCKG	2 cut(s)	1243, 1694
MspCI	CTTAAG	1 cut(s)	1313
MspI	CCGG	3 cut(s)	752, 1373, 1496
MspR9I	CCNGG	5 cut(s)	345, 649, 753, 1374, 2013
Mva1269I	GAATGC	1 cut(s)	1688
MvaI	CCWGG	3 cut(s)	345, 649, 2013
MvnI	CGCG	2 cut(s)	1177, 2106
MwoI	GCNNNNNNNGC	6 cut(s)	1268, 1277, 1469, 1528, 2054, 2075
NciI	CCSGG	2 cut(s)	753, 1374
NcoI	CCATGG	2 cut(s)	591, 1433
NdeI	CATATG	2 cut(s)	1594, 1894
NdeII	GATC	8 cut(s)	169, 387, 1235, 1369, 1607, 2086, 2121, 2193
NlaIV	GGNNCC	6 cut(s)	91, 589, 631, 725, 767, 1385
NmuCI	GTSAC	3 cut(s)	400, 1252, 1485
NsbI	TGCGCA	1 cut(s)	432
NspI	RCATGY	2 cut(s)	53, 1876
OliI	CACNNNNGTG	2 cut(s)	624, 627
PciI	ACATGT	1 cut(s)	49
PciSI	GCTCTTC	2 cut(s)	1041, 1521
PcsI	WCGNNNNNNNCGW	2 cut(s)	36, 1730
PctI	GAATGC	1 cut(s)	1688
PfeI	GAWTC	6 cut(s)	43, 306, 448, 596, 613, 949
PkrI	GCNGC	2 cut(s)	1474, 1696
PleI	GAGTC	2 cut(s)	1147, 2180
PpsI	GAGTC	2 cut(s)	1147, 2180
Ppu21I	YACGTR	3 cut(s)	502, 544, 1678
PscI	ACATGT	1 cut(s)	49
Psp124BI	GAGCTC	1 cut(s)	864
Psp1406I	AACGTT	1 cut(s)	1724
Psp6I	CCWGG	3 cut(s)	343, 647, 2011
PspGI	CCWGG	3 cut(s)	343, 647, 2011
PspN4I	GGNNCC	6 cut(s)	91, 589, 631, 725, 767, 1385
PspPI	GGNCC	4 cut(s)	359, 754, 1097, 1264
PsuI	RGATCY	3 cut(s)	1235, 1369, 2086
PvuII	CAGCTG	2 cut(s)	1243, 1694
RsaI	GTAC	5 cut(s)	529, 829, 932, 1385, 1453
RsaNI	GTAC	5 cut(s)	528, 828, 931, 1384, 1452
RseI	CAYNNNNRTG	2 cut(s)	624, 627
SacI	GAGCTC	1 cut(s)	864
SapI	GCTCTTC	2 cut(s)	1041, 1521
SatI	GCNGC	2 cut(s)	1473, 1695
Sau3AI	GATC	8 cut(s)	169, 387, 1235, 1369, 1607, 2086, 2121, 2193
Sau96I	GGNCC	4 cut(s)	359, 754, 1097, 1264
SchI	GAGTC	2 cut(s)	1148, 2181
ScrFI	CCNGG	5 cut(s)	345, 649, 753, 1374, 2013
SduI	GDGCHC	4 cut(s)	537, 864, 2050, 2236
SfaNI	GCATC	5 cut(s)	1299, 1531, 1773, 2082, 2110
SinI	GGWCC	2 cut(s)	1097, 1264
SmiI	ATTTAAAT	1 cut(s)	1162
SmiMI	CAYNNNNRTG	2 cut(s)	624, 627
SmlI	CTYRAG	1 cut(s)	1313
SmoI	CTYRAG	1 cut(s)	1313
SnaBI	TACGTA	2 cut(s)	544, 1678
Sse9I	AATT	8 cut(s)	83, 569, 980, 1147, 1285, 1501, 1729, 2185
SsiI	CCGC	7 cut(s)	900, 1177, 1262, 1472, 2069, 2106, 2248
SspMI	CTAG	5 cut(s)	603, 1605, 1622, 2079, 2168
SstI	GAGCTC	1 cut(s)	864
StyD4I	CCNGG	5 cut(s)	343, 647, 751, 1372, 2011
StyI	CCWWGG	4 cut(s)	591, 918, 1433, 1702
SwaI	ATTTAAAT	1 cut(s)	1162
TaaI	ACNGT	6 cut(s)	63, 182, 532, 578, 626, 1045
TaiI	ACGT	7 cut(s)	504, 546, 960, 1254, 1680, 1691, 1727
TaqI	TCGA	6 cut(s)	444, 853, 888, 1137, 1145, 1733
TaqII	GACCGA	1 cut(s)	1085
TasI	AATT	8 cut(s)	83, 569, 980, 1147, 1285, 1501, 1729, 2185
TatI	WGTACW	3 cut(s)	527, 930, 1451
TauI	GCSGC	1 cut(s)	1475
TfiI	GAWTC	6 cut(s)	43, 306, 448, 596, 613, 949
TscAI	CASTG	4 cut(s)	194, 537, 555, 1426
TseFI	GTSAC	3 cut(s)	400, 1252, 1485
TseI	GCWGC	1 cut(s)	1694
Tsp45I	GTSAC	3 cut(s)	400, 1252, 1485
TspDTI	ATGAA	5 cut(s)	282, 737, 1080, 1229, 1803
TspGWI	ACGGA	3 cut(s)	419, 658, 1248
TspRI	CASTG	4 cut(s)	194, 537, 555, 1426
Vha464I	CTTAAG	1 cut(s)	1313
VpaK11BI	GGWCC	2 cut(s)	1097, 1264
XapI	RAATTY	4 cut(s)	980, 1147, 1285, 1729
XceI	RCATGY	2 cut(s)	53, 1876
XmiI	GTMKAC	1 cut(s)	1998
XspI	CTAG	5 cut(s)	603, 1605, 1622, 2079, 2168
ZraI	GACGTC	1 cut(s)	958

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.