Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0005243

Physical Location & Seq

Genomic Coordinates Forward (+)

41299449 .. 41301535

Gene Structure 2087 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0343000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGCTGGCTCAACCTCCAGTTCTACACTCAAGAAACTCGCTCTATTCCTCAACATATCCTTTCTCTTTCTCTTCTTATGTCTCTGTCTTACAACTACTAATTATCTCCATCCCAATAATCACAGCTCAACCTTACCAAACCAGTCCACTATTCTTCATGCCACCATAGTTGATGATGGCTGCAGTAAACTCCATGAACACCCAGATTTTGAAACCAAGTGTTTGTATGTCAAAACCCAAATAGGTTGCAGACCTGATGGTTACTTAAACTATCTCCAAATATTTTATTGCAACTTTGGCCAGTTCCCAATAATAGCCCATGTTGCAATTCTACTTTGGCTTCTTGTTTTGTTCTACCTCTTGGGGAACACAGCTGCCAATTACTTCTGCTCCTCCTTAGAGAGCTTGTCCAAAATCTTGAAGCTCTCTCCCACCATTGCCGGAGTGACCCTCCTTTCGCTCGGAAATGGCGCCCCGGATGTCTTTTCGAGCATCGTTTCTTTCACGGGATCAGGTGATGGTGATGTCGGCCTAAACAGTGTGTTGGGGGGAGCCTTCTTTGTGTCTACTATTGTGGTAGGTCTTATTAGCATACTAATTAGCCATCAACAAGTGTCAGTTGACGAGTCCAGCTTCATAAGAGATGACATCTTTTTCTTATTCTCCCTCTCCTCTCTTCTTGTGATCATAGCGATCGGAAGAATCAATTTGTGGGGTTCCATTGCTTTTGTTGCTATTTACTTTATCTATGTCGGTTCAGTCTCAGCCACACACATATACAACGTAAGGAAATTAGAGAGAGAAAGAGACCAATTATTGGTTCTCGGAGACACTAGCACTAGTCCCTTATTGGGGCATGTCGACGAAGAAAAAGTAGTTGTTTCTGTTCAAGATTATGATGATAAAGATGGTGTCGACGATCAAGAACAGAAACAATATTCGTCTTTTGGTTATTTGGGGTATCTGTTGGAGCTGCCTCTGTCGTTGCCTAGAAGATTGACCATACCGGTTGTGAGCGAGGAAAATTGGTCCAAGCCATTTGCAGTTATTTCTGTGACCTTGGCACCGATGTCACTCGCTGCCCTTTTCAACACACATGCTGAAAATGTGGGTTCCAGAACTAAATTAGTGGCTTACATAACAGCAGCTATTACTGGTTTGGTTTTTGGTAATCTTGCTTATTTGAGCACGAAAAAGTCAGGCCCACCAAACAATAACAAGTACTTGTTCCCATGGCTTGTGGGAGGGTTTGTGATGAGTGTGGCCTGGACTTACCTCACTGCCGAAGAACTGGTGTGTTTGTTAGAGTCGTATGGGAATATATTGGGGATTAGTCCTTCCATTCTGGGACTTACTATTCTGGCTTGGGGTAACTCTCTCGGAGATTTGATAGCTAATGTGGCCATGGCGGTTAACGGTGGGGCAGACGGAGCCCAGATTGCCATTACGGGCTGCTACGCGGGGCCGATGTTCAACACACTGGTGGGATTGGGGTTCTCACTGGTTTTGTCAGCTTGGAAGGAGTATCCATCCTCATACGTCATTGTTATCGACCATTCTCTGTACGAGACGGTGGCGTTTCTGATGGCGGGGTTGCTCTGGGCGCTTGTCATGTTGCCAAACAAGAATATGAAGCTGGATCGTTATATGGGGAGTGGCCTAATCGCAATCTACTTGTGTTTTCTGTCTCTGAAGCTAGCCATGCTGCTGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000250 GO:0003674 GO:0003824 GO:0016853 GO:0016866 GO:0031559

KEGG Pathways

Metabolic & Signaling

ko00100 ko01100 ko01110 ko01130 map00100 map01100 map01110 map01130

Pfam Domains

Protein Families

SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

571

Amino Acids

62.12

Weight (kDa)

5.45

Isoelectric Point (pI)

28.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_Ca_ex	PF01699	111 - 251	1.2e-26	Sodium/calcium exchanger protein
Na_Ca_ex	PF01699	413 - 565	7.4e-30	Sodium/calcium exchanger protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45130 AT3G45130 AT3G45130 AT3G45130 AT3G45130
fragaria_vesca	FvH4_4g06000
malus_domestica	MD16G1237700.v1.1
prunus_persica	Prupe.1G063500_v2.0.a1 Prupe.1G063500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr0c45g0503831 RchiOBHm_Chr1g0332701 RchiOBHm_Chr4g0397241 RchiOBHm_Chr4g0397271 RchiOBHm_Chr4g0397301 RchiOBHm_Chr4g0397321
rosa_laevigata	RLG00000009434 RLG00000009437
rosa_multiflora	Rmu_sc0003239.1_g000001 Rmu_sc0003929.1_g000015 Rmu_sc0008546.1_g000001
rosa_roxburghii	Rroxscaffold_5G00342180 Rroxscaffold_5G00342240 Rroxscaffold_5G00342320
rosa_rugosa	Rorug03G0343000 Rorug03G0343900 Rorug03G0343900
rosa_wichuraiana	Rw4G006330 Rw4G006340 Rw4G006360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	470, 1063
AccB7I	CCANNNNNTGG	1 cut(s)	817
AccI	GTMKAC	3 cut(s)	566, 861, 915
AccII	CGCG	1 cut(s)	1460
AciI	CCGC	3 cut(s)	1409, 1460, 1589
AclWI	GGATC	2 cut(s)	517, 1647
AcoI	YGGCCR	2 cut(s)	298, 1401
AcuI	CTGAAG	1 cut(s)	1712
AcyI	GRCGYC	1 cut(s)	471
AfaI	GTAC	2 cut(s)	1223, 1565
AfiI	CCNNNNNNNGG	3 cut(s)	817, 851, 852
AgeI	ACCGGT	1 cut(s)	1006
AgsI	TTSAA	5 cut(s)	212, 421, 890, 1090, 1474
AhlI	ACTAGT	1 cut(s)	839
AjnI	CCWGG	1 cut(s)	1265
AjuI	GAANNNNNNNTTGG	2 cut(s)	804, 836
AleI	CACNNNNGTG	1 cut(s)	1481
Alw21I	GWGCWC	1 cut(s)	1190
Alw26I	GTCTC	6 cut(s)	86, 766, 801, 822, 1562, 1692
AlwI	GGATC	2 cut(s)	517, 1647
AoxI	GGCC	7 cut(s)	298, 529, 1201, 1263, 1401, 1463, 1657
ApeKI	GCWGC	8 cut(s)	180, 374, 973, 1079, 1145, 1452, 1705, 1708
ArsI	GACNNNNNNTTYG	2 cut(s)	439, 471
AsiGI	ACCGGT	1 cut(s)	1006
AspLEI	GCGC	2 cut(s)	473, 1606
AspS9I	GGNCC	3 cut(s)	1029, 1202, 1463
AsuC2I	CCSGG	1 cut(s)	476
AsuHPI	GGTGA	2 cut(s)	527, 533
AsuNHI	GCTAGC	1 cut(s)	1696
AvaII	GGWCC	1 cut(s)	1029
BalI	TGGCCA	2 cut(s)	300, 1403
BanI	GGYRCC	2 cut(s)	470, 1063
BanII	GRGCYC	1 cut(s)	1435
Bbv12I	GWGCWC	1 cut(s)	1190
BbvI	GCAGC	8 cut(s)	167, 361, 960, 1066, 1157, 1439, 1692, 1695
BccI	CCATC	8 cut(s)	117, 170, 251, 512, 612, 902, 1537, 1579
BciT130I	CCWGG	1 cut(s)	1267
BciVI	GTATCC	1 cut(s)	1536
BclI	TGATCA	1 cut(s)	684
BcnI	CCSGG	1 cut(s)	476
BcoDI	GTCTC	6 cut(s)	86, 766, 801, 822, 1562, 1692
BcuI	ACTAGT	1 cut(s)	839
BfaI	CTAG	4 cut(s)	834, 840, 990, 1697
BfmI	CTRYAG	1 cut(s)	181
BfoI	RGCGCY	2 cut(s)	474, 1607
BfuI	GTATCC	1 cut(s)	1536
BisI	GCNGC	8 cut(s)	181, 375, 974, 1080, 1146, 1453, 1706, 1709
BlsI	GCNGC	8 cut(s)	182, 376, 975, 1081, 1147, 1454, 1707, 1710
BmcAI	AGTACT	1 cut(s)	1223
Bme1390I	CCNGG	2 cut(s)	476, 1267
Bme18I	GGWCC	1 cut(s)	1029
BmgT120I	GGNCC	3 cut(s)	1029, 1202, 1463
BmiI	GGNNCC	7 cut(s)	472, 553, 718, 1065, 1114, 1432, 1464
BmrFI	CCNGG	2 cut(s)	476, 1267
BmsI	GCATC	1 cut(s)	501
BmtI	GCTAGC	1 cut(s)	1700
BplI	GAGNNNNNCTC	2 cut(s)	435, 467
BpuEI	CTTGAG	1 cut(s)	14
BpuMI	CCSGG	1 cut(s)	476
BsaHI	GRCGYC	1 cut(s)	471
BsaI	GGTCTC	1 cut(s)	801
BsaJI	CCNNGG	4 cut(s)	474, 1059, 1232, 1404
BsaWI	WCCGGW	1 cut(s)	1006
BsaXI	ACNNNNNCTCC	4 cut(s)	374, 404, 1236, 1266
Bsc4I	CCNNNNNNNGG	3 cut(s)	817, 851, 852
Bse118I	RCCGGY	1 cut(s)	1006
Bse1I	ACTGG	7 cut(s)	18, 142, 301, 1159, 1296, 1485, 1506
Bse3DI	GCAATG	2 cut(s)	435, 720
BseBI	CCWGG	1 cut(s)	1267
BseDI	CCNNGG	4 cut(s)	474, 1059, 1232, 1404
BseGI	GGATG	3 cut(s)	109, 484, 1529
BseLI	CCNNNNNNNGG	3 cut(s)	817, 851, 852
BseMI	GCAATG	2 cut(s)	435, 720
BseMII	CTCAG	1 cut(s)	777
BseNI	ACTGG	7 cut(s)	18, 142, 301, 1159, 1296, 1485, 1506
BseRI	GAGGAG	2 cut(s)	382, 661
BseXI	GCAGC	8 cut(s)	167, 361, 960, 1066, 1157, 1439, 1692, 1695
Bsh1236I	CGCG	1 cut(s)	1460
Bsh1285I	CGRYCG	1 cut(s)	696
BshFI	GGCC	7 cut(s)	300, 531, 1203, 1265, 1403, 1465, 1659
BshNI	GGYRCC	2 cut(s)	470, 1063
BshTI	ACCGGT	1 cut(s)	1006
BsiEI	CGRYCG	1 cut(s)	696
BsiHKAI	GWGCWC	1 cut(s)	1190
BsiSI	CCGG	3 cut(s)	441, 476, 1007
BslFI	GGGAC	2 cut(s)	828, 1362
BslI	CCNNNNNNNGG	3 cut(s)	817, 851, 852
BsmAI	GTCTC	6 cut(s)	86, 766, 801, 822, 1562, 1692
BsmBI	CGTCTC	1 cut(s)	1562
BsmFI	GGGAC	2 cut(s)	828, 1362
BsnI	GGCC	7 cut(s)	300, 531, 1203, 1265, 1403, 1465, 1659
Bso31I	GGTCTC	1 cut(s)	801
Bsp1286I	GDGCHC	2 cut(s)	1190, 1435
Bsp143I	GATC	5 cut(s)	509, 684, 693, 919, 1639
Bsp19I	CCATGG	2 cut(s)	1232, 1404
BspACI	CCGC	3 cut(s)	1409, 1460, 1589
BspANI	GGCC	7 cut(s)	300, 531, 1203, 1265, 1403, 1465, 1659
BspCNI	CTCAG	1 cut(s)	776
BspFNI	CGCG	1 cut(s)	1460
BspLI	GGNNCC	7 cut(s)	472, 553, 718, 1065, 1114, 1432, 1464
BspMAI	CTGCAG	1 cut(s)	185
BspOI	GCTAGC	1 cut(s)	1700
BspPI	GGATC	2 cut(s)	517, 1647
BspT107I	GGYRCC	2 cut(s)	470, 1063
BspTNI	GGTCTC	1 cut(s)	801
BsrDI	GCAATG	2 cut(s)	435, 720
BsrFI	RCCGGY	1 cut(s)	1006
BsrI	ACTGG	7 cut(s)	18, 142, 301, 1159, 1296, 1485, 1506
BssAI	RCCGGY	1 cut(s)	1006
BssECI	CCNNGG	4 cut(s)	474, 1059, 1232, 1404
BssMI	GATC	5 cut(s)	509, 684, 693, 919, 1639
BssNI	GRCGYC	1 cut(s)	471
BssT1I	CCWWGG	3 cut(s)	1059, 1232, 1404
Bst2UI	CCWGG	1 cut(s)	1267
Bst4CI	ACNGT	3 cut(s)	539, 1418, 1573
Bst6I	CTCTTC	2 cut(s)	77, 681
BstACI	GRCGYC	1 cut(s)	471
BstC8I	GCNNGC	2 cut(s)	7, 1698
BstDEI	CTNAG	2 cut(s)	397, 763
BstDSI	CCRYGG	2 cut(s)	1232, 1404
BstF5I	GGATG	3 cut(s)	109, 484, 1529
BstFNI	CGCG	1 cut(s)	1460
BstH2I	RGCGCY	2 cut(s)	474, 1607
BstHHI	GCGC	2 cut(s)	473, 1606
BstKTI	GATC	5 cut(s)	512, 687, 696, 922, 1642
BstMAI	GTCTC	6 cut(s)	86, 766, 801, 822, 1562, 1692
BstMBI	GATC	5 cut(s)	509, 684, 693, 919, 1639
BstMCI	CGRYCG	1 cut(s)	696
BstMWI	GCNNNNNNNGC	8 cut(s)	297, 323, 731, 1400, 1430, 1439, 1603, 1702
BstNI	CCWGG	1 cut(s)	1267
BstNSI	RCATGY	2 cut(s)	860, 1100
BstSCI	CCNGG	2 cut(s)	474, 1265
BstSFI	CTRYAG	1 cut(s)	181
BstUI	CGCG	1 cut(s)	1460
BstV1I	GCAGC	8 cut(s)	167, 361, 960, 1066, 1157, 1439, 1692, 1695
BsuI	GTATCC	1 cut(s)	1536
BsuRI	GGCC	7 cut(s)	300, 531, 1203, 1265, 1403, 1465, 1659
BtgI	CCRYGG	2 cut(s)	1232, 1404
BtsCI	GGATG	3 cut(s)	109, 484, 1529
BtsI	GCAGTG	1 cut(s)	1278
BtsIMutI	CAGTG	4 cut(s)	544, 1278, 1478, 1499
Cac8I	GCNNGC	2 cut(s)	7, 1698
CfoI	GCGC	2 cut(s)	473, 1606
Cfr10I	RCCGGY	1 cut(s)	1006
Cfr13I	GGNCC	3 cut(s)	1029, 1202, 1463
Csp6I	GTAC	2 cut(s)	1222, 1564
CspAI	ACCGGT	1 cut(s)	1006
CspCI	CAANNNNNGTGG	2 cut(s)	151, 186
CviAII	CATG	9 cut(s)	158, 194, 320, 857, 1097, 1233, 1405, 1612, 1702
CviQI	GTAC	2 cut(s)	1222, 1564
DdeI	CTNAG	2 cut(s)	397, 763
DinI	GGCGCC	1 cut(s)	472
DpnI	GATC	5 cut(s)	511, 686, 695, 921, 1641
DpnII	GATC	5 cut(s)	509, 684, 693, 919, 1639
EaeI	YGGCCR	2 cut(s)	298, 1401
Eam1104I	CTCTTC	2 cut(s)	77, 681
EarI	CTCTTC	2 cut(s)	77, 681
Eco130I	CCWWGG	3 cut(s)	1059, 1232, 1404
Eco24I	GRGCYC	1 cut(s)	1435
Eco31I	GGTCTC	1 cut(s)	801
Eco47I	GGWCC	1 cut(s)	1029
Eco57I	CTGAAG	1 cut(s)	1712
EcoRII	CCWGG	1 cut(s)	1265
EcoT14I	CCWWGG	3 cut(s)	1059, 1232, 1404
EcoT38I	GRGCYC	1 cut(s)	1435
EgeI	GGCGCC	1 cut(s)	472
EheI	GGCGCC	1 cut(s)	472
ErhI	CCWWGG	3 cut(s)	1059, 1232, 1404
Esp3I	CGTCTC	1 cut(s)	1562
FaeI	CATG	9 cut(s)	161, 197, 323, 860, 1100, 1236, 1408, 1615, 1705
FaqI	GGGAC	2 cut(s)	828, 1362
FatI	CATG	9 cut(s)	157, 193, 319, 856, 1096, 1232, 1404, 1611, 1701
FauI	CCCGC	2 cut(s)	1453, 1582
FbaI	TGATCA	1 cut(s)	684
FblI	GTMKAC	3 cut(s)	566, 861, 915
Fnu4HI	GCNGC	8 cut(s)	181, 375, 974, 1080, 1146, 1453, 1706, 1709
FokI	GGATG	3 cut(s)	96, 491, 1516
FriOI	GRGCYC	1 cut(s)	1435
Fsp4HI	GCNGC	8 cut(s)	181, 375, 974, 1080, 1146, 1453, 1706, 1709
FspBI	CTAG	4 cut(s)	834, 840, 990, 1697
GlaI	GCGC	2 cut(s)	472, 1605
GluI	GCNGC	8 cut(s)	181, 375, 974, 1080, 1146, 1453, 1706, 1709
HaeII	RGCGCY	2 cut(s)	474, 1607
HaeIII	GGCC	7 cut(s)	300, 531, 1203, 1265, 1403, 1465, 1659
HapII	CCGG	3 cut(s)	441, 476, 1007
HhaI	GCGC	2 cut(s)	473, 1606
Hin1I	GRCGYC	1 cut(s)	471
Hin1II	CATG	9 cut(s)	161, 197, 323, 860, 1100, 1236, 1408, 1615, 1705
Hin6I	GCGC	2 cut(s)	471, 1604
HinP1I	GCGC	2 cut(s)	471, 1604
HincII	GTYRAC	4 cut(s)	622, 862, 916, 1414
HindII	GTYRAC	4 cut(s)	622, 862, 916, 1414
HinfI	GANTC	3 cut(s)	626, 702, 1307
HpaI	GTTAAC	1 cut(s)	1414
HpaII	CCGG	3 cut(s)	441, 476, 1007
HphI	GGTGA	2 cut(s)	527, 533
Hpy166II	GTNNAC	7 cut(s)	147, 188, 567, 622, 862, 916, 1414
Hpy188I	TCNGA	7 cut(s)	464, 698, 827, 1382, 1584, 1692, 1715
Hpy188III	TCNNGA	5 cut(s)	31, 418, 890, 923, 1116
Hpy8I	GTNNAC	7 cut(s)	147, 188, 567, 622, 862, 916, 1414
Hpy99I	CGWCG	2 cut(s)	866, 920
HpyAV	CCTTC	3 cut(s)	565, 1347, 1513
HpyCH4III	ACNGT	3 cut(s)	539, 1418, 1573
HpyCH4IV	ACGT	2 cut(s)	783, 1539
HpyCH4V	TGCA	5 cut(s)	183, 249, 291, 326, 1043
HpyF10VI	GCNNNNNNNGC	8 cut(s)	297, 323, 731, 1400, 1430, 1439, 1603, 1702
HpyF3I	CTNAG	2 cut(s)	397, 763
HpySE526I	ACGT	2 cut(s)	783, 1539
Hsp92I	GRCGYC	1 cut(s)	471
Hsp92II	CATG	9 cut(s)	161, 197, 323, 860, 1100, 1236, 1408, 1615, 1705
HspAI	GCGC	2 cut(s)	471, 1604
KasI	GGCGCC	1 cut(s)	470
Ksp22I	TGATCA	1 cut(s)	684
KspAI	GTTAAC	1 cut(s)	1414
Kzo9I	GATC	5 cut(s)	509, 684, 693, 919, 1639
LmnI	GCTCC	4 cut(s)	395, 551, 970, 1430
Lsp1109I	GCAGC	8 cut(s)	167, 361, 960, 1066, 1157, 1439, 1692, 1695
LweI	GCATC	1 cut(s)	501
MaeI	CTAG	4 cut(s)	834, 840, 990, 1697
MaeII	ACGT	2 cut(s)	783, 1539
MaeIII	GTNAC	5 cut(s)	260, 445, 1054, 1071, 1370
MalI	GATC	5 cut(s)	511, 686, 695, 921, 1641
MboI	GATC	5 cut(s)	509, 684, 693, 919, 1639
MboII	GAAGA	7 cut(s)	64, 146, 668, 711, 878, 1005, 1298
MhlI	GDGCHC	2 cut(s)	1190, 1435
MlsI	TGGCCA	2 cut(s)	300, 1403
MluCI	AATT	9 cut(s)	100, 327, 379, 597, 706, 791, 812, 1024, 1124
MluNI	TGGCCA	2 cut(s)	300, 1403
Mly113I	GGCGCC	1 cut(s)	471
MlyI	GAGTC	2 cut(s)	635, 1316
MmeI	TCCRAC	1 cut(s)	948
Mox20I	TGGCCA	2 cut(s)	300, 1403
MscI	TGGCCA	2 cut(s)	300, 1403
MseI	TTAA	2 cut(s)	266, 1413
MslI	CAYNNNNRTG	1 cut(s)	1481
Msp20I	TGGCCA	2 cut(s)	300, 1403
MspA1I	CMGCKG	1 cut(s)	374
MspI	CCGG	3 cut(s)	441, 476, 1007
MspR9I	CCNGG	2 cut(s)	476, 1267
MvaI	CCWGG	1 cut(s)	1267
MvnI	CGCG	1 cut(s)	1460
MwoI	GCNNNNNNNGC	8 cut(s)	297, 323, 731, 1400, 1430, 1439, 1603, 1702
NarI	GGCGCC	1 cut(s)	471
NciI	CCSGG	1 cut(s)	476
NcoI	CCATGG	2 cut(s)	1232, 1404
NdeII	GATC	5 cut(s)	509, 684, 693, 919, 1639
NheI	GCTAGC	1 cut(s)	1696
NlaIII	CATG	9 cut(s)	161, 197, 323, 860, 1100, 1236, 1408, 1615, 1705
NlaIV	GGNNCC	7 cut(s)	472, 553, 718, 1065, 1114, 1432, 1464
NmuCI	GTSAC	3 cut(s)	445, 1054, 1071
NspI	RCATGY	2 cut(s)	860, 1100
OliI	CACNNNNGTG	1 cut(s)	1481
PfeI	GAWTC	1 cut(s)	702
PflMI	CCANNNNNTGG	1 cut(s)	817
PinAI	ACCGGT	1 cut(s)	1006
PkrI	GCNGC	8 cut(s)	182, 376, 975, 1081, 1147, 1454, 1707, 1710
Ple19I	CGATCG	1 cut(s)	696
PleI	GAGTC	2 cut(s)	634, 1315
PluTI	GGCGCC	1 cut(s)	474
PpsI	GAGTC	2 cut(s)	634, 1315
Psp6I	CCWGG	1 cut(s)	1265
PspGI	CCWGG	1 cut(s)	1265
PspN4I	GGNNCC	7 cut(s)	472, 553, 718, 1065, 1114, 1432, 1464
PspPI	GGNCC	3 cut(s)	1029, 1202, 1463
PstI	CTGCAG	1 cut(s)	185
PvuI	CGATCG	1 cut(s)	696
PvuII	CAGCTG	1 cut(s)	374
RsaI	GTAC	2 cut(s)	1223, 1565
RsaNI	GTAC	2 cut(s)	1222, 1564
RseI	CAYNNNNRTG	1 cut(s)	1481
SalI	GTCGAC	2 cut(s)	860, 914
SaqAI	TTAA	2 cut(s)	266, 1413
SatI	GCNGC	8 cut(s)	181, 375, 974, 1080, 1146, 1453, 1706, 1709
Sau3AI	GATC	5 cut(s)	509, 684, 693, 919, 1639
Sau96I	GGNCC	3 cut(s)	1029, 1202, 1463
ScaI	AGTACT	1 cut(s)	1223
SchI	GAGTC	2 cut(s)	635, 1316
ScrFI	CCNGG	2 cut(s)	476, 1267
SduI	GDGCHC	2 cut(s)	1190, 1435
SfaNI	GCATC	1 cut(s)	501
SfcI	CTRYAG	1 cut(s)	181
SfoI	GGCGCC	1 cut(s)	472
SinI	GGWCC	1 cut(s)	1029
SmiMI	CAYNNNNRTG	1 cut(s)	1481
SmlI	CTYRAG	1 cut(s)	29
SmoI	CTYRAG	1 cut(s)	29
SpeI	ACTAGT	1 cut(s)	839
Sse9I	AATT	9 cut(s)	100, 327, 379, 597, 706, 791, 812, 1024, 1124
SsiI	CCGC	3 cut(s)	1409, 1460, 1589
SspDI	GGCGCC	1 cut(s)	470
SspI	AATATT	2 cut(s)	282, 938
SspMI	CTAG	4 cut(s)	834, 840, 990, 1697
StyD4I	CCNGG	2 cut(s)	474, 1265
StyI	CCWWGG	3 cut(s)	1059, 1232, 1404
TaaI	ACNGT	3 cut(s)	539, 1418, 1573
TaiI	ACGT	2 cut(s)	786, 1542
TaqI	TCGA	4 cut(s)	488, 861, 915, 1551
TasI	AATT	9 cut(s)	100, 327, 379, 597, 706, 791, 812, 1024, 1124
TatI	WGTACW	1 cut(s)	1221
TfiI	GAWTC	1 cut(s)	702
Tru1I	TTAA	2 cut(s)	266, 1413
Tru9I	TTAA	2 cut(s)	266, 1413
TscAI	CASTG	4 cut(s)	544, 1285, 1485, 1506
TseFI	GTSAC	3 cut(s)	445, 1054, 1071
TseI	GCWGC	8 cut(s)	180, 374, 973, 1079, 1145, 1452, 1705, 1708
Tsp45I	GTSAC	3 cut(s)	445, 1054, 1071
TspDTI	ATGAA	4 cut(s)	146, 210, 625, 1646
TspGWI	ACGGA	1 cut(s)	1443
TspRI	CASTG	4 cut(s)	544, 1285, 1485, 1506
Van91I	CCANNNNNTGG	1 cut(s)	817
VpaK11BI	GGWCC	1 cut(s)	1029
XceI	RCATGY	2 cut(s)	860, 1100
XmiI	GTMKAC	3 cut(s)	566, 861, 915
XspI	CTAG	4 cut(s)	834, 840, 990, 1697
ZrmI	AGTACT	1 cut(s)	1223

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.