Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0005243

Physical Location & Seq

Genomic Coordinates Forward (+)

10970475 .. 10975142

Gene Structure 4668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00342180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGACGGCGGTGAGGACGCCATGGAGAAGGCAAGAAAATGGATTCTTCACCGTGGTGGAGTTACCACCATCCCATCATGGGGAAAGATGTGGCTCTCAGTACTTGGTGTATATGAATGGGATGGTAACAATCCACTGCCTCCTGAATTGTGGCTTTTACCTTACTTTCTTCCAGTACACCCAGGTCGAATGTGGTGTCACTGCAGGATGGTATACCTGCCCATGTCATATTTATACGGCAAGAGATTTGTTGGTCCCATCAACGGCCTTATTTTATCCCTCAGAACAGAGCTTTATACCTTTCCCTATCACCTGATTGATTGGGACCAAGCAAGAAATCTATGCGCCAAGGACGTGCTGTGGGGGTGTCTTCATAAGGTTGGGGAACCTCTTCTAATGAGATGGCCATTGTCTAAGCTCAGGCAAAAAGCTCTCACCACCGTAATGGACCACATACACTATGAGGATGAAAACACTCGGTATATCTGCATTGGACCTGTCAATAAGGTACTAAACATGATTTGTTGTTGGGTGGAGGATCAGAATTCAGAAGCATATAAGTGTCATCTTTCAAGAATCAAAGATTATCTATGGGTTGCAGAAGATGGAATGAAAATGCAGGGATATAATGGATCTCAATGCTGGGATGTTGCTTTGGCTGTTCAAGCAATCCTTTCTACCAACCTTGTGAATGAATATGGTTCCGTGCTTAAGAAGGCGCACTATTTCATAAAGAATACACAAGTTAGGAGAGACAGCTGTGGCAATCTTAGTTACTGGTACCGTCACATTTCTAAGGGCGGATGGCCCTTCTCCACTCCAGACAATGGTTGGCCTGTCTCAGATTGTACAGCTGAAGGTTTGAAGGCAGCACTCTTATTATCACATATGCCCTGTGAAATTGTGGGAGAAGCAATATCAGCTGATCAACTGCATGATGCTGTTAATGTAATATTATCCCTACAGAACAGCAATGGAGGGTTTGCATCATATGAACTCACAAGATCCTATGCCTGGTTGGAGATGATCAATCCCGCTGAAACATTTGGAGATATCGTTATTGATTATCAGTACGTGGAATGCACATCAGCAGCAGTTGAAGGCCTTAAAGCATTCATGAAATTATATCCAGGGCATCGGAAGAAAGAAATAGAAGCATGTATTGCAAAGGCAGTTCAGTTCATCGAGAGCATCCAACTTCCTGATGGCTCATGGTATGGGTCTTGGGGAGTTTGCTACACCTATGGAACATGGTTTGGAATAAAGGGGTTAATGGCTAGCGGCAAGACCTATCAGACAAGTAATAGCATTAGAAGAGCATGTCATTTCTTGCTGTCTAAGCAACTCGATTCAGGTGGCTGGGGAGAGAGCTTTCTTTCATGCCAAAACAAGGAATACACAAATCTCGAAGGGAACAAACCACATATAGTAAACACTGGATGGGCTATGTTGGCTCTAATTGAAGCAGGGCAGGGTGAAAGGGACCCGATCCCCTTGCATCGAGCAGCAAAGGTATTGATCAATTCACAGATGGAAAATGGAGATTTCCCACAACAGGTATTTGTTGTTGTAAATACTGCACAAGGTTTCAGAGGCATAAGATTACTACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000250 GO:0003674 GO:0003824 GO:0016853 GO:0016866 GO:0031559

KEGG Pathways

Metabolic & Signaling

ko00100 ko01100 ko01110 ko01130 map00100 map01100 map01110 map01130

Pfam Domains

Protein Families

SQHop_cyclase_C SQHop_cyclase_N

Protein Analysis

537

Amino Acids

60.86

Weight (kDa)

6.75

Isoelectric Point (pI)

40.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SQHop_cyclase_N	PF13249	5 - 200	1.9e-23	Squalene-hopene cyclase N-terminal domain
SQHop_cyclase_C	PF13243	212 - 522	1.8e-44	Squalene-hopene cyclase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G45130 AT3G45130 AT3G45130 AT3G45130 AT3G45130
fragaria_vesca	FvH4_4g06000
malus_domestica	MD16G1237700.v1.1
prunus_persica	Prupe.1G063500_v2.0.a1 Prupe.1G063500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr0c45g0503831 RchiOBHm_Chr1g0332701 RchiOBHm_Chr4g0397241 RchiOBHm_Chr4g0397271 RchiOBHm_Chr4g0397301 RchiOBHm_Chr4g0397321
rosa_laevigata	RLG00000009434 RLG00000009437
rosa_multiflora	Rmu_sc0003239.1_g000001 Rmu_sc0003929.1_g000015 Rmu_sc0008546.1_g000001
rosa_roxburghii	Rroxscaffold_5G00342180 Rroxscaffold_5G00342240 Rroxscaffold_5G00342320
rosa_rugosa	Rorug03G0343000 Rorug03G0343900 Rorug03G0343900
rosa_wichuraiana	Rw4G006330 Rw4G006340 Rw4G006360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	225
Acc65I	GGTACC	1 cut(s)	780
AccB1I	GGYRCC	1 cut(s)	780
AccB7I	CCANNNNNTGG	1 cut(s)	827
AccI	GTMKAC	1 cut(s)	213
AciI	CCGC	4 cut(s)	9, 801, 1035, 1281
AclWI	GGATC	4 cut(s)	546, 640, 999, 1483
AcoI	YGGCCR	1 cut(s)	404
AcsI	RAATTY	1 cut(s)	544
AcuI	CTGAAG	1 cut(s)	876
AcyI	GRCGYC	1 cut(s)	18
AfaI	GTAC	6 cut(s)	102, 177, 510, 782, 850, 1073
AfiI	CCNNNNNNNGG	7 cut(s)	79, 80, 263, 827, 1014, 1390, 1555
AflII	CTTAAG	1 cut(s)	710
AgsI	TTSAA	5 cut(s)	573, 665, 865, 1100, 1463
AjiI	CACGTC	1 cut(s)	355
AjnI	CCWGG	3 cut(s)	181, 1013, 1129
AleI	CACNNNNGTG	1 cut(s)	54
AluBI	AGCT	7 cut(s)	292, 418, 431, 759, 854, 923, 1371
AluI	AGCT	7 cut(s)	292, 418, 431, 759, 854, 923, 1371
Alw26I	GTCTC	2 cut(s)	747, 844
AlwI	GGATC	4 cut(s)	546, 640, 999, 1483
AoxI	GGCC	5 cut(s)	265, 404, 806, 833, 1102
ApeKI	GCWGC	3 cut(s)	869, 1091, 1505
ApoI	RAATTY	1 cut(s)	544
ArsI	GACNNNNNNTTYG	2 cut(s)	181, 213
Asp700I	GAANNNNTTC	1 cut(s)	390
Asp718I	GGTACC	1 cut(s)	780
AspLEI	GCGC	2 cut(s)	347, 721
AspS9I	GGNCC	6 cut(s)	254, 325, 448, 494, 807, 1483
AsuHPI	GGTGA	5 cut(s)	23, 41, 302, 427, 1487
AsuNHI	GCTAGC	1 cut(s)	1277
AvaII	GGWCC	5 cut(s)	254, 325, 448, 494, 1483
BalI	TGGCCA	1 cut(s)	406
BanI	GGYRCC	1 cut(s)	780
BbsI	GAAGAC	1 cut(s)	362
BbvI	GCAGC	3 cut(s)	881, 1103, 1517
BceAI	ACGGC	3 cut(s)	22, 253, 280
BcgI	CGANNNNNNTGC	2 cut(s)	1477, 1511
BciT130I	CCWGG	3 cut(s)	183, 1015, 1131
BclI	TGATCA	3 cut(s)	925, 1026, 1518
BcoDI	GTCTC	2 cut(s)	747, 844
BfaI	CTAG	1 cut(s)	1278
BfmI	CTRYAG	2 cut(s)	202, 962
BfrI	CTTAAG	1 cut(s)	710
BfuAI	ACCTGC	1 cut(s)	225
BisI	GCNGC	4 cut(s)	870, 1092, 1282, 1506
BlsI	GCNGC	4 cut(s)	871, 1093, 1283, 1507
BmcAI	AGTACT	1 cut(s)	102
Bme1390I	CCNGG	3 cut(s)	183, 1015, 1131
Bme18I	GGWCC	5 cut(s)	254, 325, 448, 494, 1483
BmgBI	CACGTC	1 cut(s)	355
BmgT120I	GGNCC	6 cut(s)	254, 325, 448, 494, 807, 1483
BmiI	GGNNCC	7 cut(s)	256, 326, 387, 703, 782, 1484, 1485
BmrFI	CCNGG	3 cut(s)	183, 1015, 1131
BmsI	GCATC	5 cut(s)	928, 995, 1144, 1200, 1507
BmtI	GCTAGC	1 cut(s)	1281
BpiI	GAAGAC	1 cut(s)	362
BpmI	CTGGAG	1 cut(s)	804
Bpu10I	CCTNAGC	1 cut(s)	419
BsaAI	YACGTR	1 cut(s)	1075
BsaHI	GRCGYC	1 cut(s)	18
BsaJI	CCNNGG	5 cut(s)	21, 52, 181, 348, 1130
BsaXI	ACNNNNNCTCC	2 cut(s)	1041, 1071
Bsc4I	CCNNNNNNNGG	7 cut(s)	79, 80, 263, 827, 1014, 1390, 1555
Bse1I	ACTGG	3 cut(s)	173, 782, 1441
Bse3DI	GCAATG	1 cut(s)	979
BseBI	CCWGG	3 cut(s)	183, 1015, 1131
BseDI	CCNNGG	5 cut(s)	21, 52, 181, 348, 1130
BseGI	GGATG	8 cut(s)	69, 127, 213, 472, 652, 809, 1191, 1445
BseLI	CCNNNNNNNGG	7 cut(s)	79, 80, 263, 827, 1014, 1390, 1555
BseMI	GCAATG	1 cut(s)	979
BseMII	CTCAG	4 cut(s)	111, 295, 433, 855
BseNI	ACTGG	3 cut(s)	173, 782, 1441
BseXI	GCAGC	3 cut(s)	881, 1103, 1517
BseYI	CCCAGC	2 cut(s)	642, 1359
BsgI	GTGCAG	1 cut(s)	1563
BshFI	GGCC	5 cut(s)	267, 406, 808, 835, 1104
BshNI	GGYRCC	1 cut(s)	780
BslFI	GGGAC	3 cut(s)	240, 338, 1496
BslI	CCNNNNNNNGG	7 cut(s)	79, 80, 263, 827, 1014, 1390, 1555
BsmAI	GTCTC	2 cut(s)	747, 844
BsmFI	GGGAC	3 cut(s)	240, 338, 1496
BsmI	GAATGC	2 cut(s)	1085, 1112
BsnI	GGCC	5 cut(s)	267, 406, 808, 835, 1104
Bsp1407I	TGTACA	1 cut(s)	848
Bsp143I	GATC	7 cut(s)	538, 632, 925, 1004, 1026, 1488, 1518
Bsp19I	CCATGG	1 cut(s)	21
BspACI	CCGC	4 cut(s)	9, 801, 1035, 1281
BspANI	GGCC	5 cut(s)	267, 406, 808, 835, 1104
BspCNI	CTCAG	4 cut(s)	110, 294, 432, 854
BspHI	TCATGA	1 cut(s)	1116
BspLI	GGNNCC	7 cut(s)	256, 326, 387, 703, 782, 1484, 1485
BspMAI	CTGCAG	1 cut(s)	206
BspMI	ACCTGC	1 cut(s)	225
BspOI	GCTAGC	1 cut(s)	1281
BspPI	GGATC	4 cut(s)	546, 640, 999, 1483
BspQI	GCTCTTC	1 cut(s)	1309
BspT107I	GGYRCC	1 cut(s)	780
BspTI	CTTAAG	1 cut(s)	710
BsrDI	GCAATG	1 cut(s)	979
BsrGI	TGTACA	1 cut(s)	848
BsrI	ACTGG	3 cut(s)	173, 782, 1441
BssECI	CCNNGG	5 cut(s)	21, 52, 181, 348, 1130
BssMI	GATC	7 cut(s)	538, 632, 925, 1004, 1026, 1488, 1518
BssNAI	GTATAC	1 cut(s)	214
BssNI	GRCGYC	1 cut(s)	18
BssT1I	CCWWGG	2 cut(s)	21, 348
Bst1107I	GTATAC	1 cut(s)	214
Bst2UI	CCWGG	3 cut(s)	183, 1015, 1131
Bst4CI	ACNGT	3 cut(s)	53, 442, 785
Bst6I	CTCTTC	2 cut(s)	396, 1309
BstACI	GRCGYC	1 cut(s)	18
BstAFI	CTTAAG	1 cut(s)	710
BstAPI	GCANNNNNTGC	1 cut(s)	1163
BstAUI	TGTACA	1 cut(s)	848
BstBAI	YACGTR	1 cut(s)	1075
BstC8I	GCNNGC	1 cut(s)	1279
BstDEI	CTNAG	8 cut(s)	97, 281, 414, 419, 770, 795, 841, 1338
BstDSI	CCRYGG	2 cut(s)	21, 52
BstF5I	GGATG	8 cut(s)	69, 127, 213, 472, 652, 809, 1191, 1445
BstHHI	GCGC	2 cut(s)	347, 721
BstKTI	GATC	7 cut(s)	541, 635, 928, 1007, 1029, 1491, 1521
BstMAI	GTCTC	2 cut(s)	747, 844
BstMBI	GATC	7 cut(s)	538, 632, 925, 1004, 1026, 1488, 1518
BstMWI	GCNNNNNNNGC	5 cut(s)	665, 920, 1163, 1339, 1451
BstNI	CCWGG	3 cut(s)	183, 1015, 1131
BstNSI	RCATGY	2 cut(s)	1161, 1323
BstSCI	CCNGG	3 cut(s)	181, 1013, 1129
BstSFI	CTRYAG	2 cut(s)	202, 962
BstV1I	GCAGC	3 cut(s)	881, 1103, 1517
BstV2I	GAAGAC	1 cut(s)	362
BstX2I	RGATCY	2 cut(s)	632, 1004
BstXI	CCANNNNNNTGG	1 cut(s)	445
BstYI	RGATCY	2 cut(s)	632, 1004
BstZ17I	GTATAC	1 cut(s)	214
BsuRI	GGCC	5 cut(s)	267, 406, 808, 835, 1104
BtgI	CCRYGG	2 cut(s)	21, 52
BtrI	CACGTC	1 cut(s)	355
BtsCI	GGATG	8 cut(s)	69, 127, 213, 472, 652, 809, 1191, 1445
BtsI	GCAGTG	2 cut(s)	134, 199
BtsIMutI	CAGTG	3 cut(s)	134, 199, 1434
BveI	ACCTGC	1 cut(s)	225
Cac8I	GCNNGC	1 cut(s)	1279
CciI	TCATGA	1 cut(s)	1116
CfoI	GCGC	2 cut(s)	347, 721
Cfr13I	GGNCC	6 cut(s)	254, 325, 448, 494, 807, 1483
CseI	GACGC	1 cut(s)	26
Csp6I	GTAC	6 cut(s)	101, 176, 509, 781, 849, 1072
CviQI	GTAC	6 cut(s)	101, 176, 509, 781, 849, 1072
DdeI	CTNAG	8 cut(s)	97, 281, 414, 419, 770, 795, 841, 1338
DpnI	GATC	7 cut(s)	540, 634, 927, 1006, 1028, 1490, 1520
DpnII	GATC	7 cut(s)	538, 632, 925, 1004, 1026, 1488, 1518
EaeI	YGGCCR	1 cut(s)	404
Eam1104I	CTCTTC	2 cut(s)	396, 1309
EarI	CTCTTC	2 cut(s)	396, 1309
EciI	GGCGGA	1 cut(s)	816
Eco130I	CCWWGG	2 cut(s)	21, 348
Eco147I	AGGCCT	1 cut(s)	1104
Eco32I	GATATC	1 cut(s)	1054
Eco47I	GGWCC	5 cut(s)	254, 325, 448, 494, 1483
Eco57I	CTGAAG	1 cut(s)	876
EcoO109I	RGGNCCY	1 cut(s)	1483
EcoRI	GAATTC	1 cut(s)	544
EcoRII	CCWGG	3 cut(s)	181, 1013, 1129
EcoRV	GATATC	1 cut(s)	1054
EcoT14I	CCWWGG	2 cut(s)	21, 348
ErhI	CCWWGG	2 cut(s)	21, 348
FalI	AAGNNNNNCTT	2 cut(s)	657, 689
FaqI	GGGAC	3 cut(s)	240, 338, 1496
FauI	CCCGC	1 cut(s)	1042
FauNDI	CATATG	2 cut(s)	888, 991
FbaI	TGATCA	3 cut(s)	925, 1026, 1518
FblI	GTMKAC	1 cut(s)	213
Fnu4HI	GCNGC	4 cut(s)	870, 1092, 1282, 1506
FokI	GGATG	8 cut(s)	56, 134, 220, 479, 659, 816, 1178, 1452
Fsp4HI	GCNGC	4 cut(s)	870, 1092, 1282, 1506
FspBI	CTAG	1 cut(s)	1278
GlaI	GCGC	2 cut(s)	346, 720
GluI	GCNGC	4 cut(s)	870, 1092, 1282, 1506
GsaI	CCCAGC	2 cut(s)	646, 1363
GsuI	CTGGAG	1 cut(s)	804
HaeIII	GGCC	5 cut(s)	267, 406, 808, 835, 1104
HgaI	GACGC	1 cut(s)	26
HhaI	GCGC	2 cut(s)	347, 721
Hin1I	GRCGYC	1 cut(s)	18
Hin6I	GCGC	2 cut(s)	345, 719
HinP1I	GCGC	2 cut(s)	345, 719
HinfI	GANTC	3 cut(s)	43, 576, 1349
HphI	GGTGA	5 cut(s)	23, 41, 302, 427, 1487
Hpy166II	GTNNAC	3 cut(s)	178, 214, 1432
Hpy188I	TCNGA	7 cut(s)	284, 543, 550, 844, 1140, 1296, 1592
Hpy188III	TCNNGA	7 cut(s)	143, 573, 821, 1117, 1186, 1202, 1406
Hpy8I	GTNNAC	3 cut(s)	178, 214, 1432
HpyAV	CCTTC	7 cut(s)	22, 709, 820, 851, 859, 1094, 1403
HpyCH4III	ACNGT	3 cut(s)	53, 442, 785
HpyCH4IV	ACGT	2 cut(s)	354, 1074
HpyF10VI	GCNNNNNNNGC	5 cut(s)	665, 920, 1163, 1339, 1451
HpyF3I	CTNAG	8 cut(s)	97, 281, 414, 419, 770, 795, 841, 1338
HpySE526I	ACGT	2 cut(s)	354, 1074
Hsp92I	GRCGYC	1 cut(s)	18
HspAI	GCGC	2 cut(s)	345, 719
KflI	GGGWCCC	1 cut(s)	1483
KpnI	GGTACC	1 cut(s)	784
Ksp22I	TGATCA	3 cut(s)	925, 1026, 1518
Kzo9I	GATC	7 cut(s)	538, 632, 925, 1004, 1026, 1488, 1518
LguI	GCTCTTC	1 cut(s)	1309
Lsp1109I	GCAGC	3 cut(s)	881, 1103, 1517
LweI	GCATC	5 cut(s)	928, 995, 1144, 1200, 1507
MaeI	CTAG	1 cut(s)	1278
MaeII	ACGT	2 cut(s)	354, 1074
MaeIII	GTNAC	5 cut(s)	61, 125, 197, 773, 785
MalI	GATC	7 cut(s)	540, 634, 927, 1006, 1028, 1490, 1520
MboI	GATC	7 cut(s)	538, 632, 925, 1004, 1026, 1488, 1518
MboII	GAAGA	7 cut(s)	38, 161, 362, 383, 614, 1153, 1326
MflI	RGATCY	2 cut(s)	632, 1004
MlsI	TGGCCA	1 cut(s)	406
MluCI	AATT	6 cut(s)	146, 544, 900, 1121, 1458, 1522
MluNI	TGGCCA	1 cut(s)	406
MmeI	TCCRAC	2 cut(s)	999, 1219
MnlI	CCTC	8 cut(s)	7, 150, 290, 399, 457, 529, 971, 1586
Mox20I	TGGCCA	1 cut(s)	406
MroXI	GAANNNNTTC	1 cut(s)	390
MscI	TGGCCA	1 cut(s)	406
MseI	TTAA	4 cut(s)	711, 945, 1107, 1271
MslI	CAYNNNNRTG	3 cut(s)	54, 443, 559
Msp20I	TGGCCA	1 cut(s)	406
MspA1I	CMGCKG	4 cut(s)	759, 854, 923, 1037
MspCI	CTTAAG	1 cut(s)	710
MspR9I	CCNGG	3 cut(s)	183, 1015, 1131
Mva1269I	GAATGC	2 cut(s)	1085, 1112
MvaI	CCWGG	3 cut(s)	183, 1015, 1131
MwoI	GCNNNNNNNGC	5 cut(s)	665, 920, 1163, 1339, 1451
NcoI	CCATGG	1 cut(s)	21
NdeI	CATATG	2 cut(s)	888, 991
NdeII	GATC	7 cut(s)	538, 632, 925, 1004, 1026, 1488, 1518
NheI	GCTAGC	1 cut(s)	1277
NlaIV	GGNNCC	7 cut(s)	256, 326, 387, 703, 782, 1484, 1485
NmuCI	GTSAC	2 cut(s)	197, 785
NspI	RCATGY	2 cut(s)	1161, 1323
OliI	CACNNNNGTG	1 cut(s)	54
PagI	TCATGA	1 cut(s)	1116
PceI	AGGCCT	1 cut(s)	1104
PciSI	GCTCTTC	1 cut(s)	1309
PctI	GAATGC	2 cut(s)	1085, 1112
PdmI	GAANNNNTTC	1 cut(s)	390
PfeI	GAWTC	3 cut(s)	43, 576, 1349
PflMI	CCANNNNNTGG	1 cut(s)	827
PkrI	GCNGC	4 cut(s)	871, 1093, 1283, 1507
Ppu21I	YACGTR	1 cut(s)	1075
PpuMI	RGGWCCY	1 cut(s)	1483
Psp5II	RGGWCCY	1 cut(s)	1483
Psp6I	CCWGG	3 cut(s)	181, 1013, 1129
PspFI	CCCAGC	2 cut(s)	642, 1359
PspGI	CCWGG	3 cut(s)	181, 1013, 1129
PspN4I	GGNNCC	7 cut(s)	256, 326, 387, 703, 782, 1484, 1485
PspPI	GGNCC	6 cut(s)	254, 325, 448, 494, 807, 1483
PspPPI	RGGWCCY	1 cut(s)	1483
PstI	CTGCAG	1 cut(s)	206
PsuI	RGATCY	2 cut(s)	632, 1004
PvuII	CAGCTG	3 cut(s)	759, 854, 923
RsaI	GTAC	6 cut(s)	102, 177, 510, 782, 850, 1073
RsaNI	GTAC	6 cut(s)	101, 176, 509, 781, 849, 1072
RseI	CAYNNNNRTG	3 cut(s)	54, 443, 559
SapI	GCTCTTC	1 cut(s)	1309
SaqAI	TTAA	4 cut(s)	711, 945, 1107, 1271
SatI	GCNGC	4 cut(s)	870, 1092, 1282, 1506
Sau3AI	GATC	7 cut(s)	538, 632, 925, 1004, 1026, 1488, 1518
Sau96I	GGNCC	6 cut(s)	254, 325, 448, 494, 807, 1483
ScaI	AGTACT	1 cut(s)	102
ScrFI	CCNGG	3 cut(s)	183, 1015, 1131
SfaNI	GCATC	5 cut(s)	928, 995, 1144, 1200, 1507
SfcI	CTRYAG	2 cut(s)	202, 962
SinI	GGWCC	5 cut(s)	254, 325, 448, 494, 1483
SmiMI	CAYNNNNRTG	3 cut(s)	54, 443, 559
SmlI	CTYRAG	1 cut(s)	710
SmoI	CTYRAG	1 cut(s)	710
Sse9I	AATT	6 cut(s)	146, 544, 900, 1121, 1458, 1522
SseBI	AGGCCT	1 cut(s)	1104
SsiI	CCGC	4 cut(s)	9, 801, 1035, 1281
SspI	AATATT	1 cut(s)	954
SspMI	CTAG	1 cut(s)	1278
StuI	AGGCCT	1 cut(s)	1104
StyD4I	CCNGG	3 cut(s)	181, 1013, 1129
StyI	CCWWGG	2 cut(s)	21, 348
TaaI	ACNGT	3 cut(s)	53, 442, 785
TaiI	ACGT	2 cut(s)	357, 1077
TaqI	TCGA	5 cut(s)	187, 1185, 1347, 1407, 1501
TasI	AATT	6 cut(s)	146, 544, 900, 1121, 1458, 1522
TatI	WGTACW	3 cut(s)	100, 175, 848
TauI	GCSGC	1 cut(s)	1284
TfiI	GAWTC	3 cut(s)	43, 576, 1349
Tru1I	TTAA	4 cut(s)	711, 945, 1107, 1271
Tru9I	TTAA	4 cut(s)	711, 945, 1107, 1271
TscAI	CASTG	3 cut(s)	141, 206, 1441
TseFI	GTSAC	2 cut(s)	197, 785
TseI	GCWGC	3 cut(s)	869, 1091, 1505
Tsp45I	GTSAC	2 cut(s)	197, 785
TspGWI	ACGGA	1 cut(s)	694
TspRI	CASTG	3 cut(s)	141, 206, 1441
Van91I	CCANNNNNTGG	1 cut(s)	827
Vha464I	CTTAAG	1 cut(s)	710
VpaK11BI	GGWCC	5 cut(s)	254, 325, 448, 494, 1483
XapI	RAATTY	1 cut(s)	544
XceI	RCATGY	2 cut(s)	1161, 1323
XcmI	CCANNNNNNNNNTGG	3 cut(s)	189, 828, 1202
XmiI	GTMKAC	1 cut(s)	213
XmnI	GAANNNNTTC	1 cut(s)	390
XspI	CTAG	1 cut(s)	1278
ZrmI	AGTACT	1 cut(s)	102

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.