Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000814

Physical Location & Seq

Genomic Coordinates Forward (+)

17624340 .. 17629285

Gene Structure 4946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G47780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

ATGGCGGATCCTGGTCCTGCCAGTTTCTCAACGAGAGCCAATGCCTTGCTTAGGAAAAACTTAACCTATCAGAAACGGAATCTATGGAGCAATATACGGCTAATCATGATCCCATTCTACCTCTGTATACTTCTAGTGATTATACAAATCCTGTTCGATACACAAGTTAACAACTCTGCTGATAATCGTTGTGGTTGTGAATGCATCGAAAGAAATAGAGCTGGAAAATGCCAAAGAGAGCTTTGCGGTTTAGAACATTCTAAACCGGATCAAGCCTTCTTTTGTTCTATCCCTCGTCCTCCACTATGGCCTCCTTTGTTACAAATCCCGCGTCCTGAGAGTCGCGATGTTAGAGGTCTTCGTGATGATTCTTGCAGAAGAACAGGATCTTGTCCTGTTACTATACTCTTTACTGGAAATAACCGTTCCCTTGGAACAACTGTATCTGAGAATCTGTTCACTAGTTCTGTGTCGGCGAACGCCTCTGAGATTTTGCGTACTTTAGCCAACAATGTTTTGGGTACAACAGTTGAGGCAGATTTCACCAATTATCTTGATCCAGGGATTGCCTCAAATCTTTCCATCTACAATATCCAACCTCGGTGCATTCTAAATGCTACGTTTCCGTTCTCATTCGAACAACCACCTCTCAAGTTTGAGAAAGAGTTGAGATGTGTTCAAGGATCAAATCTTTGGACAAATACCTCCAAAGAGGTCAATGATAAGATTTTCAAGGGTTATAAGAAAGGAAACCCCGAGGGAAAGATAAATGAGATCGCTGCAGCATATGATCTCTTGAACACTGATAGGAACAATTTTAATGTGCACATCTGGTATAATTCAACGTACAAGGACGATGCAGGAAATAGACTTATAAAGTTGATCCGTGTTCCCCGCTCAGTCAATTTGGTGTCAAATGCTTACCTTCAATTTCTACAAGGACCGGGGACAAGGATGTTGTTTGAATATGTCAAAGAAATGCCTAAACCAGAAACAAGTCTTCGTCTGGACATTGCGTCTCTAATTGGCCCCCTTTTCTTCACCTGGGTTATTCTTCTTCTGTTCCCTGTGATCTTGTCGTCATTAGTGTATGAGAAACAGCAACATCTAAGAATTATAATGAAAATGCATGGCCTAGGAGATGGTCCTTATTGGATGATTTCCTACGCCTATTTCCTTACCATATCCGTGTTATACGTTATATGCCTGATGATATTCGGGTCAGCAATAGGACTGAAGTTCTTTCGGCTTAATTCCTACAGCATCCAGTTCGTATTCTATTTTCTCTATTTAAATCTGCAAATCGCCCTTGCCTTTCTAGTTTCTTCAGTATTTTCAAAAGTCAAGACATCAACAGTTGCTTCTTACATATACGTGTTTGGATCTGGACTTTTGGGTTTGTTTCTACTCAACTTTCTGATTGAAGATTCATCATTCCCTAGAGGCTGGATTATTGTCATGGAGTTATATCCTGGCTTCTCCTTATACCGTGGCCTGTATGAGTTGGCGCAATTTGCTTTCCGGGGAAACTTGAGAGGGGAAGATGGGATGAAGTGGAAAGATTTTGGTGATAGTGCAATGGATGATGTTTTTTACATCATTGTCGTTGAATGGTTTCTTGCACTCATTGCAGCATACTATATCGATAAGATATCTTCATCCGGAAGAAACCCGTTGTTCTTCTTGCAAAACCCTTTCAAGAAATCTCCTTCTTTGAGAAGACCTAGTTTGCAGAGGCAAGGCTCCAAAGTCTCAGTTGATATGGAAAAACCAGATGTTACTCACGAGAGTAAAAAAGTCGAGCGGTTGATGCTTGAGTCGAGCACAAGCCATGCGATTGTATGTGACAACCTGAAGAAGGTGTATCCTGGTAGAGATGGGAACCCGCCTAAATTGGCAGTTCGTGGGTTATCTCTTGCAGTGCCTTCAGGAGAATGCTTCGGCATGTTAGGTCCCAATGGTGCTGGAAAGACTTCCTTCATCAATATGATGACTGGGCTCCTGAAACCGACATCTGGGACAGCACTTGTTCAAGGTTTGGATATATGCAATGATATGGACAGAGTGTACACCAGCATGGGCGTATGCCCGCAGCATGATTTGCTATGGGAAACACTGACAGGAAGGGAACATCTGCTGTTTTATGGGAGACTTAAGAATCTCAAAGGCGCTGATCTCAACCAAGCTGTGGAAGAGTCTCTTAAGAGTGTCAACCTTTTCCATGGAGGAGTTGCGGACAAGCCTGCTGGGAAATATAGCGGAGGTATGAAAAGACGGCTGAGCGTAGCCATTTCACTTATCGGGAATCCTAAGGTGGTTTATATGGATGAGCCAAGTACAGGACTTGATCCAGCTTCGAGAAAGAACCTATGGACTGTCATCAAGCGTGCAAAACAAAACACCGCGATAATCCTCACAACCCACTCAATGGAAGAAGCAGAATTTCTATGTGACCGATTGGGTATTTTTGTGGACGGAGGCTTGCAATGCATTGGCAACCCAAAAGAGCTGAAGGGAAGGTACGGTGGATCTTATGTGTTTACGATGACAACATCTTCAGAACACGAGCAAAACGTGGAGAAGCTAATTAAAGATGTCTCCCCAAACGCCAAGAAGATATATCACATCGCAGGGACTCAGAAGTTTGAGCTTCCAAAAGAAGAGGTTCGGATCTCAGAGGTGTTCCAGGCTGTGGAGAAGGCGAAGAGCAACTTTACCGTTTTCGCTTGGGGACTCGCCGACACAACTCTTGAAGATGTCTTCATCAAGGTTGTGAGAAACGGTCAGGCCTTTAATGTCTTCTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006869 GO:0008150 GO:0009506 GO:0010876 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

935

Amino Acids

105.05

Weight (kDa)

9.03

Isoelectric Point (pI)

33.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane_3	PF12698	257 - 508	1.2e-12	ABC-2 family transporter protein
ABC_tran	PF00005	635 - 779	9.2e-26	ABC transporter
AAA_21	PF13304	743 - 811	7.2e-09	AAA domain, putative AbiEii toxin, Type IV TA system
ABCA12_C	PF24526	845 - 895	1.6e-28	ABCA12-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47740 AT3G47750 AT3G47760 AT3G47760 AT3G47760 AT3G47770 AT3G47770 AT3G47770 AT3G47780 AT3G47790 AT3G47790 AT3G47790 AT5G61700 AT5G61700 AT5G61700 AT5G61700 AT5G61740 AT5G61740 AT5G61740
fragaria_vesca	FvH4_5g15270 FvH4_5g15270 FvH4_5g15270 FvH4_5g15270 FvH4_5g17020
malus_domestica	MD00G1160300.v1.1 MD06G1189700.v1.1 MD14G1196600.v1.1
prunus_persica	Prupe.5G188500_v2.0.a1 Prupe.5G188500_v2.0.a1 Prupe.5G188700_v2.0.a1 Prupe.5G229600_v2.0.a1 Prupe.5G229600_v2.0.a1
pyrus_communis	pycom06g16850 pycom14g16330
rosa_chinensis	RchiOBHm_Chr7g0178831 RchiOBHm_Chr7g0180791 RchiOBHm_Chr7g0180811
rosa_laevigata	RLG00000005228 RLG00000005229 RLG00000005411
rosa_multiflora	Rmu_sc0007457.1_g000007 Rmu_sc0007457.1_g000009 Rmu_sc0025325.1_g000002 Rmu_sc0025325.1_g000004
rosa_roxburghii	Rroxscaffold_3G00272510 Rroxscaffold_3G00272520 Rroxscaffold_3G00274540
rosa_rugosa	Rorug01G0115100 Rorug06G0420100 Rorug06G0420100 Rorug06G0436000 Rorug06G0436100 Rorug06G0436200 Rorug06G0436300
rosa_samantha	Rh1BG107000 Rh7AG019400 Rh7AG037800 Rh7AG038000 Rh7BG018900 Rh7BG037600 Rh7BG037800 Rh7CG019500 Rh7CG039200 Rh7CG039300 Rh7DG019300
rosa_wichuraiana	Rw7G001580 Rw7G003120 Rw7G003130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	741, 875, 1118
AccB7I	CCANNNNNTGG	3 cut(s)	2188, 2428, 2692
AccBSI	CCGCTC	2 cut(s)	897, 1804
AccI	GTMKAC	1 cut(s)	127
AccII	CGCG	3 cut(s)	331, 345, 2405
AccIII	TCCGGA	1 cut(s)	1661
AcsI	RAATTY	1 cut(s)	2441
AcuI	CTGAAG	6 cut(s)	1256, 1311, 1874, 1911, 2531, 2541
AfaI	GTAC	6 cut(s)	499, 523, 848, 2069, 2338, 2522
AfiI	CCNNNNNNNGG	7 cut(s)	51, 1858, 2015, 2188, 2339, 2428, 2692
AflII	CTTAAG	2 cut(s)	2153, 2201
AflIII	ACRYGT	1 cut(s)	1374
AhdI	GACNNNNNGTC	1 cut(s)	1015
AhlI	ACTAGT	1 cut(s)	461
AjnI	CCWGG	6 cut(s)	10, 559, 1043, 1471, 1867, 2685
AluBI	AGCT	7 cut(s)	221, 241, 2186, 2354, 2509, 2584, 2650
AluI	AGCT	7 cut(s)	221, 241, 2186, 2354, 2509, 2584, 2650
Alw21I	GWGCWC	2 cut(s)	828, 1826
Alw26I	GTCTC	5 cut(s)	1023, 1756, 2143, 2202, 2602
Alw44I	GTGCAC	1 cut(s)	824
Ama87I	CYCGRG	1 cut(s)	755
Aor13HI	TCCGGA	1 cut(s)	1661
AoxI	GGCC	5 cut(s)	308, 1027, 1132, 1492, 2787
ApaLI	GTGCAC	1 cut(s)	824
ApeKI	GCWGC	4 cut(s)	779, 782, 1631, 2092
ApoI	RAATTY	1 cut(s)	2441
ArsI	GACNNNNNNTTYG	2 cut(s)	316, 348
Asp700I	GAANNNNTTC	4 cut(s)	455, 1614, 1972, 2664
AspA2I	CCTAGG	1 cut(s)	1135
AspLEI	GCGC	2 cut(s)	1510, 2171
AspS9I	GGNCC	5 cut(s)	14, 941, 1028, 1145, 1952
AsuC2I	CCSGG	2 cut(s)	945, 1523
AsuHPI	GGTGA	3 cut(s)	535, 1033, 1580
AsuII	TTCGAA	1 cut(s)	636
AvaI	CYCGRG	1 cut(s)	755
AvaII	GGWCC	4 cut(s)	14, 941, 1145, 1952
AvrII	CCTAGG	1 cut(s)	1135
AxyI	CCTNAGG	1 cut(s)	2310
BaeGI	GKGCMC	1 cut(s)	828
BaeI	ACNNNNGTAYC	6 cut(s)	150, 183, 426, 459, 513, 546
BamHI	GGATCC	1 cut(s)	7
BanII	GRGCYC	1 cut(s)	2001
BarI	GAAGNNNNNNTAC	2 cut(s)	2504, 2536
BauI	CACGAG	2 cut(s)	1784, 2564
BbsI	GAAGAC	5 cut(s)	350, 992, 1726, 2752, 2791
Bbv12I	GWGCWC	2 cut(s)	828, 1826
BbvI	GCAGC	4 cut(s)	766, 794, 1643, 2104
BccI	CCATC	4 cut(s)	590, 1136, 1538, 1871
BceAI	ACGGC	2 cut(s)	113, 2291
BcgI	CGANNNNNNTGC	2 cut(s)	1252, 1286
BciT130I	CCWGG	6 cut(s)	12, 561, 1045, 1473, 1869, 2687
BciVI	GTATCC	1 cut(s)	1875
BcnI	CCSGG	2 cut(s)	945, 1523
BcoDI	GTCTC	5 cut(s)	1023, 1756, 2143, 2202, 2602
BcuI	ACTAGT	1 cut(s)	461
BfaI	CTAG	6 cut(s)	134, 462, 1136, 1319, 1440, 1725
BfmI	CTRYAG	2 cut(s)	780, 1258
BfoI	RGCGCY	1 cut(s)	2172
BfrI	CTTAAG	2 cut(s)	2153, 2201
BfuI	GTATCC	1 cut(s)	1875
BisI	GCNGC	4 cut(s)	780, 783, 1632, 2093
BlnI	CCTAGG	1 cut(s)	1135
BlpI	GCTNAGC	1 cut(s)	2279
BlsI	GCNGC	4 cut(s)	781, 784, 1633, 2094
Bme1390I	CCNGG	8 cut(s)	12, 561, 945, 1045, 1473, 1523, 1869, 2687
Bme18I	GGWCC	4 cut(s)	14, 941, 1145, 1952
BmeRI	GACNNNNNGTC	1 cut(s)	1015
BmeT110I	CYCGRG	1 cut(s)	755
BmgT120I	GGNCC	5 cut(s)	14, 941, 1028, 1145, 1952
BmiI	GGNNCC	6 cut(s)	9, 1030, 1744, 1883, 1954, 2000
BmrFI	CCNGG	8 cut(s)	12, 561, 945, 1045, 1473, 1523, 1869, 2687
BmrI	ACTGGG	1 cut(s)	2004
BmsI	GCATC	4 cut(s)	213, 847, 1272, 1800
BmuI	ACTGGG	1 cut(s)	2004
BpiI	GAAGAC	5 cut(s)	350, 992, 1726, 2752, 2791
Bpu10I	CCTNAGC	1 cut(s)	50
Bpu1102I	GCTNAGC	1 cut(s)	2279
Bpu14I	TTCGAA	1 cut(s)	636
BpuEI	CTTGAG	3 cut(s)	635, 1552, 1835
BpuMI	CCSGG	2 cut(s)	945, 1523
Bsa29I	ATCGAT	1 cut(s)	1644
BsaAI	YACGTR	1 cut(s)	1375
BsaWI	WCCGGW	2 cut(s)	265, 1661
Bsc4I	CCNNNNNNNGG	7 cut(s)	51, 1858, 2015, 2188, 2339, 2428, 2692
Bse1I	ACTGG	4 cut(s)	21, 418, 1267, 1999
Bse21I	CCTNAGG	1 cut(s)	2310
Bse3DI	GCAATG	5 cut(s)	1011, 1584, 1626, 2056, 2492
BseAI	TCCGGA	1 cut(s)	1661
BseBI	CCWGG	6 cut(s)	12, 561, 1045, 1473, 1869, 2687
BseCI	ATCGAT	1 cut(s)	1644
BseGI	GGATG	7 cut(s)	960, 1161, 1263, 1554, 1588, 1658, 2332
BseLI	CCNNNNNNNGG	7 cut(s)	51, 1858, 2015, 2188, 2339, 2428, 2692
BseMI	GCAATG	5 cut(s)	1011, 1584, 1626, 2056, 2492
BseMII	CTCAG	8 cut(s)	327, 438, 477, 912, 1767, 2270, 2651, 2688
BseNI	ACTGG	4 cut(s)	21, 418, 1267, 1999
BseRI	GAGGAG	1 cut(s)	2241
BseSI	GKGCMC	1 cut(s)	828
BseXI	GCAGC	4 cut(s)	766, 794, 1643, 2104
BseYI	CCCAGC	1 cut(s)	2246
Bsh1236I	CGCG	3 cut(s)	331, 345, 2405
BshFI	GGCC	5 cut(s)	310, 1029, 1134, 1494, 2789
BshVI	ATCGAT	1 cut(s)	1644
BsiHKAI	GWGCWC	2 cut(s)	828, 1826
BsiHKCI	CYCGRG	1 cut(s)	755
BsiSI	CCGG	4 cut(s)	266, 944, 1522, 1662
BslFI	GGGAC	5 cut(s)	961, 1938, 2032, 2647, 2745
BslI	CCNNNNNNNGG	7 cut(s)	51, 1858, 2015, 2188, 2339, 2428, 2692
BsmAI	GTCTC	5 cut(s)	1023, 1756, 2143, 2202, 2602
BsmBI	CGTCTC	1 cut(s)	1023
BsmFI	GGGAC	5 cut(s)	961, 1938, 2032, 2647, 2745
BsmI	GAATGC	3 cut(s)	206, 606, 1940
BsnI	GGCC	5 cut(s)	310, 1029, 1134, 1494, 2789
BsoBI	CYCGRG	1 cut(s)	755
Bsp119I	TTCGAA	1 cut(s)	636
Bsp1286I	GDGCHC	3 cut(s)	828, 1826, 2001
Bsp13I	TCCGGA	1 cut(s)	1661
Bsp1407I	TGTACA	1 cut(s)	2067
Bsp1720I	GCTNAGC	1 cut(s)	2279
Bsp19I	CCATGG	1 cut(s)	2221
Bsp68I	TCGCGA	1 cut(s)	345
BspANI	GGCC	5 cut(s)	310, 1029, 1134, 1494, 2789
BspCNI	CTCAG	8 cut(s)	328, 439, 478, 911, 1766, 2271, 2650, 2687
BspDI	ATCGAT	1 cut(s)	1644
BspEI	TCCGGA	1 cut(s)	1661
BspFNI	CGCG	3 cut(s)	331, 345, 2405
BspHI	TCATGA	1 cut(s)	105
BspLI	GGNNCC	6 cut(s)	9, 1030, 1744, 1883, 1954, 2000
BspMAI	CTGCAG	1 cut(s)	784
BspQI	GCTCTTC	1 cut(s)	2699
BspT104I	TTCGAA	1 cut(s)	636
BspTI	CTTAAG	2 cut(s)	2153, 2201
BsrBI	CCGCTC	2 cut(s)	897, 1804
BsrDI	GCAATG	5 cut(s)	1011, 1584, 1626, 2056, 2492
BsrGI	TGTACA	1 cut(s)	2067
BsrI	ACTGG	4 cut(s)	21, 418, 1267, 1999
BssNAI	GTATAC	1 cut(s)	128
BssSI	CACGAG	2 cut(s)	1784, 2564
BssT1I	CCWWGG	3 cut(s)	430, 1135, 2221
Bst1107I	GTATAC	1 cut(s)	128
Bst2BI	CACGAG	2 cut(s)	1784, 2564
Bst2UI	CCWGG	6 cut(s)	12, 561, 1045, 1473, 1869, 2687
Bst4CI	ACNGT	9 cut(s)	425, 442, 529, 1357, 1490, 2377, 2525, 2719, 2783
Bst6I	CTCTTC	3 cut(s)	2187, 2655, 2699
BstAFI	CTTAAG	2 cut(s)	2153, 2201
BstAPI	GCANNNNNTGC	2 cut(s)	1628, 2101
BstAUI	TGTACA	1 cut(s)	2067
BstBAI	YACGTR	1 cut(s)	1375
BstBI	TTCGAA	1 cut(s)	636
BstC8I	GCNNGC	4 cut(s)	2090, 2244, 2388, 2483
BstDSI	CCRYGG	2 cut(s)	1489, 2221
BstENI	CCTNNNNNAGG	2 cut(s)	49, 1856
BstF5I	GGATG	7 cut(s)	960, 1161, 1263, 1554, 1588, 1658, 2332
BstFNI	CGCG	3 cut(s)	331, 345, 2405
BstH2I	RGCGCY	1 cut(s)	2172
BstHHI	GCGC	2 cut(s)	1510, 2171
BstMAI	GTCTC	5 cut(s)	1023, 1756, 2143, 2202, 2602
BstMWI	GCNNNNNNNGC	5 cut(s)	1514, 1628, 1810, 2101, 2487
BstNI	CCWGG	6 cut(s)	12, 561, 1045, 1473, 1869, 2687
BstNSI	RCATGY	1 cut(s)	1948
BstSCI	CCNGG	8 cut(s)	10, 559, 943, 1043, 1471, 1521, 1867, 2685
BstSFI	CTRYAG	2 cut(s)	780, 1258
BstSLI	GKGCMC	1 cut(s)	828
BstUI	CGCG	3 cut(s)	331, 345, 2405
BstV1I	GCAGC	4 cut(s)	766, 794, 1643, 2104
BstV2I	GAAGAC	5 cut(s)	350, 992, 1726, 2752, 2791
BstX2I	RGATCY	5 cut(s)	7, 386, 1382, 2528, 2670
BstYI	RGATCY	5 cut(s)	7, 386, 1382, 2528, 2670
BstZ17I	GTATAC	1 cut(s)	128
Bsu15I	ATCGAT	1 cut(s)	1644
Bsu36I	CCTNAGG	1 cut(s)	2310
BsuI	GTATCC	1 cut(s)	1875
BsuRI	GGCC	5 cut(s)	310, 1029, 1134, 1494, 2789
BsuTUI	ATCGAT	1 cut(s)	1644
BtgI	CCRYGG	2 cut(s)	1489, 2221
BtgZI	GCGATG	2 cut(s)	360, 2611
BtsCI	GGATG	7 cut(s)	960, 1161, 1263, 1554, 1588, 1658, 2332
BtsI	GCAGTG	1 cut(s)	1926
BtsIMutI	CAGTG	3 cut(s)	801, 1926, 2114
BtuMI	TCGCGA	1 cut(s)	345
Cac8I	GCNNGC	4 cut(s)	2090, 2244, 2388, 2483
CciI	TCATGA	1 cut(s)	105
CfoI	GCGC	2 cut(s)	1510, 2171
Cfr13I	GGNCC	5 cut(s)	14, 941, 1028, 1145, 1952
ClaI	ATCGAT	1 cut(s)	1644
CseI	GACGC	2 cut(s)	320, 1005
Csp6I	GTAC	6 cut(s)	498, 522, 847, 2068, 2337, 2521
CviAII	CATG	8 cut(s)	106, 1130, 1459, 1832, 1945, 2077, 2096, 2222
CviQI	GTAC	6 cut(s)	498, 522, 847, 2068, 2337, 2521
DraI	TTTAAA	1 cut(s)	1293
DriI	GACNNNNNGTC	1 cut(s)	1015
Eam1104I	CTCTTC	3 cut(s)	2187, 2655, 2699
Eam1105I	GACNNNNNGTC	1 cut(s)	1015
EarI	CTCTTC	3 cut(s)	2187, 2655, 2699
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	3 cut(s)	430, 1135, 2221
Eco147I	AGGCCT	1 cut(s)	2789
Eco24I	GRGCYC	1 cut(s)	2001
Eco32I	GATATC	1 cut(s)	1653
Eco47I	GGWCC	4 cut(s)	14, 941, 1145, 1952
Eco57I	CTGAAG	6 cut(s)	1256, 1311, 1874, 1911, 2531, 2541
Eco81I	CCTNAGG	1 cut(s)	2310
Eco88I	CYCGRG	1 cut(s)	755
EcoNI	CCTNNNNNAGG	2 cut(s)	49, 1856
EcoO109I	RGGNCCY	1 cut(s)	1952
EcoRII	CCWGG	6 cut(s)	10, 559, 1043, 1471, 1867, 2685
EcoRV	GATATC	1 cut(s)	1653
EcoT14I	CCWWGG	3 cut(s)	430, 1135, 2221
EcoT22I	ATGCAT	3 cut(s)	206, 1131, 2492
EcoT38I	GRGCYC	1 cut(s)	2001
ErhI	CCWWGG	3 cut(s)	430, 1135, 2221
Esp3I	CGTCTC	1 cut(s)	1023
FaeI	CATG	8 cut(s)	109, 1133, 1462, 1835, 1948, 2080, 2099, 2225
FalI	AAGNNNNNCTT	6 cut(s)	1961, 1993, 2184, 2216, 2696, 2728
FaqI	GGGAC	5 cut(s)	961, 1938, 2032, 2647, 2745
FatI	CATG	8 cut(s)	105, 1129, 1458, 1831, 1944, 2076, 2095, 2221
FauI	CCCGC	4 cut(s)	336, 902, 1893, 2097
FauNDI	CATATG	1 cut(s)	787
FblI	GTMKAC	1 cut(s)	127
Fnu4HI	GCNGC	4 cut(s)	780, 783, 1632, 2093
FokI	GGATG	7 cut(s)	967, 1168, 1250, 1561, 1595, 1645, 2339
FriOI	GRGCYC	1 cut(s)	2001
Fsp4HI	GCNGC	4 cut(s)	780, 783, 1632, 2093
FspBI	CTAG	6 cut(s)	134, 462, 1136, 1319, 1440, 1725
GlaI	GCGC	2 cut(s)	1509, 2170
GluI	GCNGC	4 cut(s)	780, 783, 1632, 2093
GsaI	CCCAGC	1 cut(s)	2250
HaeII	RGCGCY	1 cut(s)	2172
HaeIII	GGCC	5 cut(s)	310, 1029, 1134, 1494, 2789
HapII	CCGG	4 cut(s)	266, 944, 1522, 1662
HgaI	GACGC	2 cut(s)	320, 1005
HhaI	GCGC	2 cut(s)	1510, 2171
Hin1II	CATG	8 cut(s)	109, 1133, 1462, 1835, 1948, 2080, 2099, 2225
Hin6I	GCGC	2 cut(s)	1508, 2169
HinP1I	GCGC	2 cut(s)	1508, 2169
HincII	GTYRAC	2 cut(s)	169, 2212
HindII	GTYRAC	2 cut(s)	169, 2212
HpaI	GTTAAC	1 cut(s)	169
HpaII	CCGG	4 cut(s)	266, 944, 1522, 1662
HphI	GGTGA	3 cut(s)	535, 1033, 1580
Hpy166II	GTNNAC	9 cut(s)	128, 169, 459, 826, 2068, 2070, 2212, 2473, 2541
Hpy188I	TCNGA	8 cut(s)	72, 448, 487, 1419, 2560, 2640, 2670, 2677
Hpy8I	GTNNAC	9 cut(s)	128, 169, 459, 826, 2068, 2070, 2212, 2473, 2541
HpyCH4III	ACNGT	9 cut(s)	425, 442, 529, 1357, 1490, 2377, 2525, 2719, 2783
HpyCH4IV	ACGT	5 cut(s)	620, 845, 1197, 1374, 2574
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1514, 1628, 1810, 2101, 2487
HpySE526I	ACGT	5 cut(s)	620, 845, 1197, 1374, 2574
Hsp92II	CATG	8 cut(s)	109, 1133, 1462, 1835, 1948, 2080, 2099, 2225
HspAI	GCGC	2 cut(s)	1508, 2169
Kpn2I	TCCGGA	1 cut(s)	1661
KspAI	GTTAAC	1 cut(s)	169
LguI	GCTCTTC	1 cut(s)	2699
LmnI	GCTCC	3 cut(s)	87, 1748, 2004
Lsp1109I	GCAGC	4 cut(s)	766, 794, 1643, 2104
LweI	GCATC	4 cut(s)	213, 847, 1272, 1800
MaeI	CTAG	6 cut(s)	134, 462, 1136, 1319, 1440, 1725
MaeII	ACGT	5 cut(s)	620, 845, 1197, 1374, 2574
MaeIII	GTNAC	5 cut(s)	318, 397, 1777, 1844, 2450
MbiI	CCGCTC	2 cut(s)	897, 1804
MflI	RGATCY	5 cut(s)	7, 386, 1382, 2528, 2670
MhlI	GDGCHC	3 cut(s)	828, 1826, 2001
MlyI	GAGTC	5 cut(s)	349, 1826, 2204, 2629, 2727
MmeI	TCCRAC	1 cut(s)	619
Mph1103I	ATGCAT	3 cut(s)	206, 1131, 2492
MroI	TCCGGA	1 cut(s)	1661
MroXI	GAANNNNTTC	4 cut(s)	455, 1614, 1972, 2664
MseI	TTAA	9 cut(s)	62, 168, 819, 1251, 1292, 2154, 2202, 2589, 2793
MslI	CAYNNNNRTG	4 cut(s)	1187, 1373, 1985, 2075
MspCI	CTTAAG	2 cut(s)	2153, 2201
MspI	CCGG	4 cut(s)	266, 944, 1522, 1662
MspR9I	CCNGG	8 cut(s)	12, 561, 945, 1045, 1473, 1523, 1869, 2687
Mva1269I	GAATGC	3 cut(s)	206, 606, 1940
MvaI	CCWGG	6 cut(s)	12, 561, 1045, 1473, 1869, 2687
MvnI	CGCG	3 cut(s)	331, 345, 2405
MwoI	GCNNNNNNNGC	5 cut(s)	1514, 1628, 1810, 2101, 2487
NciI	CCSGG	2 cut(s)	945, 1523
NcoI	CCATGG	1 cut(s)	2221
NdeI	CATATG	1 cut(s)	787
NlaIII	CATG	8 cut(s)	109, 1133, 1462, 1835, 1948, 2080, 2099, 2225
NlaIV	GGNNCC	6 cut(s)	9, 1030, 1744, 1883, 1954, 2000
NmuCI	GTSAC	2 cut(s)	1844, 2450
NruI	TCGCGA	1 cut(s)	345
NsiI	ATGCAT	3 cut(s)	206, 1131, 2492
NspI	RCATGY	1 cut(s)	1948
NspV	TTCGAA	1 cut(s)	636
PagI	TCATGA	1 cut(s)	105
PceI	AGGCCT	1 cut(s)	2789
PciSI	GCTCTTC	1 cut(s)	2699
PcsI	WCGNNNNNNNCGW	1 cut(s)	2571
PctI	GAATGC	3 cut(s)	206, 606, 1940
PdmI	GAANNNNTTC	4 cut(s)	455, 1614, 1972, 2664
PfeI	GAWTC	6 cut(s)	79, 368, 451, 1427, 2158, 2305
PflMI	CCANNNNNTGG	3 cut(s)	2188, 2428, 2692
PkrI	GCNGC	4 cut(s)	781, 784, 1633, 2094
PleI	GAGTC	5 cut(s)	348, 1825, 2203, 2629, 2727
PpsI	GAGTC	5 cut(s)	348, 1825, 2203, 2629, 2727
Ppu21I	YACGTR	1 cut(s)	1375
PpuMI	RGGWCCY	1 cut(s)	1952
PsiI	TTATAA	3 cut(s)	741, 875, 1118
Psp5II	RGGWCCY	1 cut(s)	1952
Psp6I	CCWGG	6 cut(s)	10, 559, 1043, 1471, 1867, 2685
PspFI	CCCAGC	1 cut(s)	2246
PspGI	CCWGG	6 cut(s)	10, 559, 1043, 1471, 1867, 2685
PspN4I	GGNNCC	6 cut(s)	9, 1030, 1744, 1883, 1954, 2000
PspPI	GGNCC	5 cut(s)	14, 941, 1028, 1145, 1952
PspPPI	RGGWCCY	1 cut(s)	1952
PstI	CTGCAG	1 cut(s)	784
PsuI	RGATCY	5 cut(s)	7, 386, 1382, 2528, 2670
RruI	TCGCGA	1 cut(s)	345
RsaI	GTAC	6 cut(s)	499, 523, 848, 2069, 2338, 2522
RsaNI	GTAC	6 cut(s)	498, 522, 847, 2068, 2337, 2521
RseI	CAYNNNNRTG	4 cut(s)	1187, 1373, 1985, 2075
SapI	GCTCTTC	1 cut(s)	2699
SaqAI	TTAA	9 cut(s)	62, 168, 819, 1251, 1292, 2154, 2202, 2589, 2793
SatI	GCNGC	4 cut(s)	780, 783, 1632, 2093
Sau96I	GGNCC	5 cut(s)	14, 941, 1028, 1145, 1952
SchI	GAGTC	5 cut(s)	349, 1826, 2204, 2629, 2727
ScrFI	CCNGG	8 cut(s)	12, 561, 945, 1045, 1473, 1523, 1869, 2687
SduI	GDGCHC	3 cut(s)	828, 1826, 2001
SfaNI	GCATC	4 cut(s)	213, 847, 1272, 1800
SfcI	CTRYAG	2 cut(s)	780, 1258
SfuI	TTCGAA	1 cut(s)	636
SinI	GGWCC	4 cut(s)	14, 941, 1145, 1952
SmiI	ATTTAAAT	1 cut(s)	1293
SmiMI	CAYNNNNRTG	4 cut(s)	1187, 1373, 1985, 2075
SmlI	CTYRAG	5 cut(s)	650, 1531, 1814, 2153, 2201
SmoI	CTYRAG	5 cut(s)	650, 1531, 1814, 2153, 2201
SpeI	ACTAGT	1 cut(s)	461
SseBI	AGGCCT	1 cut(s)	2789
SspMI	CTAG	6 cut(s)	134, 462, 1136, 1319, 1440, 1725
StuI	AGGCCT	1 cut(s)	2789
StyD4I	CCNGG	8 cut(s)	10, 559, 943, 1043, 1471, 1521, 1867, 2685
StyI	CCWWGG	3 cut(s)	430, 1135, 2221
SwaI	ATTTAAAT	1 cut(s)	1293
TaaI	ACNGT	9 cut(s)	425, 442, 529, 1357, 1490, 2377, 2525, 2719, 2783
TaiI	ACGT	5 cut(s)	623, 848, 1200, 1377, 2577
TaqI	TCGA	7 cut(s)	156, 207, 636, 1644, 1800, 1820, 2357
TaqII	GACCGA	1 cut(s)	2469
TatI	WGTACW	2 cut(s)	2067, 2336
TfiI	GAWTC	6 cut(s)	79, 368, 451, 1427, 2158, 2305
Tru1I	TTAA	9 cut(s)	62, 168, 819, 1251, 1292, 2154, 2202, 2589, 2793
Tru9I	TTAA	9 cut(s)	62, 168, 819, 1251, 1292, 2154, 2202, 2589, 2793
TscAI	CASTG	3 cut(s)	808, 1926, 2121
TseFI	GTSAC	2 cut(s)	1844, 2450
TseI	GCWGC	4 cut(s)	779, 782, 1631, 2092
Tsp45I	GTSAC	2 cut(s)	1844, 2450
TspDTI	ATGAA	7 cut(s)	1136, 1419, 1565, 1647, 1969, 2282, 2752
TspGWI	ACGGA	5 cut(s)	91, 615, 875, 1177, 2490
TspRI	CASTG	3 cut(s)	808, 1926, 2121
Van91I	CCANNNNNTGG	3 cut(s)	2188, 2428, 2692
Vha464I	CTTAAG	2 cut(s)	2153, 2201
VneI	GTGCAC	1 cut(s)	824
VpaK11BI	GGWCC	4 cut(s)	14, 941, 1145, 1952
XagI	CCTNNNNNAGG	2 cut(s)	49, 1856
XapI	RAATTY	1 cut(s)	2441
XceI	RCATGY	1 cut(s)	1948
XcmI	CCANNNNNNNNNTGG	1 cut(s)	514
XmaJI	CCTAGG	1 cut(s)	1135
XmiI	GTMKAC	1 cut(s)	127
XmnI	GAANNNNTTC	4 cut(s)	455, 1614, 1972, 2664
XspI	CTAG	6 cut(s)	134, 462, 1136, 1319, 1440, 1725
Zsp2I	ATGCAT	3 cut(s)	206, 1131, 2492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.