Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0000814

Physical Location & Seq

Genomic Coordinates Forward (+)

2524796 .. 2531629

Gene Structure 6834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G003120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2889 bp

ATGTCTGCTGCTGTTTCTCAAGTTCAGGCAAGCATTTCAATGCCGGAGGAGTCATCTGATCATGGCCGTGCCAGCTTCTGGACTCGAGCAAATGCTCTGCTCAGAAAGAACTTAACTTTCCAAAAACGGAATATGAAACAGAATGTTCGGCTTGTTTCAGTCCCAATTTTGCTATGTATATTGCTCCTTCTCATCCAAATTTTGGTCAACCATGAACTGGACAAGCCTGAGAATAGGTGTGGCTGTGCTTGTGTTGATACTAACGGAGACGGCGAATGTGAGAAAGTTTGTGGATTGGAATACTCAACTGTGGATCAAGGGTTCACTTGTCCCATTCTTCATCCCCCGGAATGGCCGCCATTGCTTCAAGTGCCGAATCCTGAATTTCGTGCGGTGATATCTGACGTTGTTCCGTATAAAGACTTGCCGAGTGAGTCGTGCAAGAGGACAGGGTCTTGTCCTGTAACCGTATTGTTCACCGGGAGTAATCATTCGATGGGGGAAGTGTTGGCTCGGCATATGTTCACGAGTTCTTTTACATTGAATTCCTCTGATAATCTGGATAGTTTAGCCAGTAATGTCTTAGGCTCAGAATCAATGCCTGAATTTTCCAATTTCCTTGATCCTGCCTTCTATTCGGGTCTTCCGATGTATAATGTGCAAAGCAGATGCTCAAACAACTCTGTCTTTTCTGTTCCCATTAATATATCATCCTTTGAAATACAACAAGAGGTGAGATGTGTTCAAGGTTTGCATGTGTGGCGCAATAGTTCTTCTGAGATAAACAATGAGCTATATAAAGGTTACAGATATGGGAATTCAGAGAGGAAGATTAATGAACTACTTTCAGCTTATGACTTCTCTAACTCAAATATGAACAACTTTAATGTAAGCATATGGTACAATTCAACCTTTAAGAATGACACAGGCAATAGTCCTATTGCTTTGCTGCGGCTTCCACGCTCAGTAAATTTGGTATCCAATGCGTACCTTCAGTTTTTGCTAGGATCTGGTACAAACATGTTGCTTGAGTTTGTCAAAGAAATGCCCAAGCCCGAAACCAGTCTCAGGCTGGACTTTTCTTCTCTTATTGGTACAATCTTCTACACGTGGGTCATTTTACAGCTATTCCCGGTGGTGTTGACGTCACTGGTTTATGAGAAAGAACAAAAATTGAGAATCATGATGAAAATGCATGGACTTGGTGACGGACCTTATTGGATGATTTCATATATATATTTTCTTACAGTATCTTCAATCTACATGCTATGTTTTGTTATATTTGGCTCACTTATAGGATTAAAATTCTTCGCACTGAATGACTACAGCATCCAATTTGTCTTTTACTTCATCTATATCAACCTGCAAATATCAACGGCTTTTCTAGTATCTACTATTTTTTCAAATGTGAAGACTTCTGCAGTCATAGGTTATATATGCGTCTTTGGAACTGGGCTTTTGGGAGCCTCTCTTTTTGAGTTCTTTCTCCAAACTCCGTCATTCCCTAGAGGTTGGATCACTGTTCTAGAGCTATATCCTGGCTTCTCTCTGTATCGCGGGTTATATGAGTTTGCTCAATACTCCTTCAATGGGGATTATATGGGGACTGATGGGATGCGGTGGCGAGATTTGAGTGACAGAGAGAATGGGATGAAAGAGGTCTGGATTATCATGGCTGTTGAGTGGTTTGTGGTGCTTTTTCTTGCATATTACCTAGATCAAGCTGCATCATCATCAGGAAGTGTGAAATATCCTTTATTTTTCTTTCAAAGCGGAAGGAAGAAACTGTCATCTCGTAGGATGCATTCTTTGCAAAGGCAGGAATCTGGACTGCTTATTCAGACGGACAAACCTGATGTTGGGCAAGAGATGGAGAAGGTCAACAAGTTGCTACTGGAACCGGATACAAGTCATGCAATTATTTGCAACAATCTCAAAAAGGTTTATCCCGGAAGAGATGGAAACCCTGACAAATTTGCTGTGAGAGGGATGTCTCTTGCTTTGTCTCGAGGGGAGTGCTTTGGTATGCTTGGCCCTAATGGTGCTGGGAAGACCTCTTTTATTAATATGATGATTGGTCTGACAAAGTCAACCTCTGGCACGGCTTTTGTTCAAGGTCTGGACATCAACACTCAGATGGATGAAATATATACCAGCATGGGAGTTTGTCCACAGCATGACCTACTATGGGAAACCCTGACTGGAAGGGAGCATCTACTTTTTTATGGAAGACTTAAGAACCTCAAAGGTTCTGGATTAAGACAAGCAGTGGAAGAATCTTTGAAAAGTGTCAGTCTATTTCATGGTGGGGTTGCAGACAAAAGAGCTGGAAAGTATAGTGGAGGTATGAAGAGAAGGCTTAGCGTCGCAATTTCACTGATAGGTGATCCTAAAGTTGTTTACATGGATGAGCCCAGCACTGGACTTGATCCAGCTTCAAGACATAATCTATGGAATGTTGTGAAGCGGGCAAAACAAGATCGTGCAATCATCCTAACAACACATTCCATGGAAGAGGCAGAGGTTCTATGTGATCGTTTAGGAGTTTTTGTAGATGGCAGCTTGCAGTGCATAGGAAACCCAAAAGAGCTGAAAGCCAGATATGGAGGATCTTATGTGTTTACAATGACGACATCTTCAAATCACGAGGAAGAGGTGGAGAACTTAGTGCGGAGTCTCTCCCCAAATGCTAATAAGATATACCATCTCTCTGGAACCCAGAAGTTTGAGTTGCCGAAACATGAAGTCAAAATTGCAGATGTATTCCAAGCCGTGGAGAATGCAAAGAGCAAGTTCACAGTTTTTGCATGGGGTCTAGCTGACACTACCTTGGAGGATGTTTTCATCAAGGTCGCACTTGGGGCTCAAGCCTCCAATATCTTGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005911 GO:0006810 GO:0006869 GO:0008150 GO:0009506 GO:0010876 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0030054 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055044 GO:0055085 GO:0071702 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

962

Amino Acids

107.77

Weight (kDa)

6.8

Isoelectric Point (pI)

38.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane_3	PF12698	285 - 571	6.3e-14	ABC-2 family transporter protein
ABC_tran	PF00005	662 - 806	2.2e-24	ABC transporter
AAA_21	PF13304	777 - 838	2.4e-08	AAA domain, putative AbiEii toxin, Type IV TA system
ABCA12_C	PF24526	872 - 922	1.1e-31	ABCA12-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47740 AT3G47750 AT3G47760 AT3G47760 AT3G47760 AT3G47770 AT3G47770 AT3G47770 AT3G47780 AT3G47790 AT3G47790 AT3G47790 AT5G61700 AT5G61700 AT5G61700 AT5G61700 AT5G61740 AT5G61740 AT5G61740
fragaria_vesca	FvH4_5g15270 FvH4_5g15270 FvH4_5g15270 FvH4_5g15270 FvH4_5g17020
malus_domestica	MD00G1160300.v1.1 MD06G1189700.v1.1 MD14G1196600.v1.1
prunus_persica	Prupe.5G188500_v2.0.a1 Prupe.5G188500_v2.0.a1 Prupe.5G188700_v2.0.a1 Prupe.5G229600_v2.0.a1 Prupe.5G229600_v2.0.a1
pyrus_communis	pycom06g16850 pycom14g16330
rosa_chinensis	RchiOBHm_Chr7g0178831 RchiOBHm_Chr7g0180791 RchiOBHm_Chr7g0180811
rosa_laevigata	RLG00000005228 RLG00000005229 RLG00000005411
rosa_multiflora	Rmu_sc0007457.1_g000007 Rmu_sc0007457.1_g000009 Rmu_sc0025325.1_g000002 Rmu_sc0025325.1_g000004
rosa_roxburghii	Rroxscaffold_3G00272510 Rroxscaffold_3G00272520 Rroxscaffold_3G00274540
rosa_rugosa	Rorug01G0115100 Rorug06G0420100 Rorug06G0420100 Rorug06G0436000 Rorug06G0436100 Rorug06G0436200 Rorug06G0436300
rosa_samantha	Rh1BG107000 Rh7AG019400 Rh7AG037800 Rh7AG038000 Rh7BG018900 Rh7BG037600 Rh7BG037800 Rh7CG019500 Rh7CG039200 Rh7CG039300 Rh7DG019300
rosa_wichuraiana	Rw7G001580 Rw7G003120 Rw7G003130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1148
Acc36I	ACCTGC	1 cut(s)	1371
AccB7I	CCANNNNNTGG	4 cut(s)	78, 202, 217, 2773
AccII	CGCG	1 cut(s)	1557
AciI	CCGC	8 cut(s)	356, 392, 952, 1557, 1618, 1773, 2467, 2671
AclWI	GGATC	7 cut(s)	321, 617, 1015, 1523, 2381, 2423, 2617
AcoI	YGGCCR	2 cut(s)	64, 353
AcsI	RAATTY	8 cut(s)	198, 383, 544, 605, 817, 970, 1304, 1973
AcuI	CTGAAG	1 cut(s)	977
AcvI	CACGTG	1 cut(s)	1110
AcyI	GRCGYC	1 cut(s)	1145
AfaI	GTAC	4 cut(s)	902, 989, 1015, 1096
AflII	CTTAAG	1 cut(s)	2234
AflIII	ACRYGT	2 cut(s)	1020, 1107
AjnI	CCWGG	1 cut(s)	1537
AloI	GAACNNNNNNTCC	2 cut(s)	305, 337
Alw26I	GTCTC	5 cut(s)	261, 1070, 1998, 2010, 2681
AlwI	GGATC	7 cut(s)	321, 617, 1015, 1523, 2381, 2423, 2617
AlwNI	CAGNNNCTG	1 cut(s)	78
Ama87I	CYCGRG	2 cut(s)	84, 2007
AoxI	GGCC	3 cut(s)	64, 353, 2032
ApeKI	GCWGC	4 cut(s)	8, 949, 1724, 2559
ApoI	RAATTY	8 cut(s)	198, 383, 544, 605, 817, 970, 1304, 1973
AseI	ATTAAT	3 cut(s)	702, 834, 2064
AspLEI	GCGC	1 cut(s)	765
AspS9I	GGNCC	2 cut(s)	1211, 2033
AsuC2I	CCSGG	4 cut(s)	347, 481, 1133, 1950
AsuHPI	GGTGA	5 cut(s)	406, 469, 745, 1217, 2396
AvaI	CYCGRG	2 cut(s)	84, 2007
AvaII	GGWCC	1 cut(s)	1211
BanII	GRGCYC	2 cut(s)	2415, 2866
BauI	CACGAG	2 cut(s)	526, 2645
BbrPI	CACGTG	1 cut(s)	1110
BbsI	GAAGAC	4 cut(s)	635, 1418, 2057, 2236
BbvI	GCAGC	3 cut(s)	936, 1711, 2571
BccI	CCATC	7 cut(s)	490, 1604, 1864, 1952, 2131, 2549, 2712
BceAI	ACGGC	5 cut(s)	51, 286, 1392, 2118, 2756
BcgI	CGANNNNNNTGC	2 cut(s)	1998, 2032
BciT130I	CCWGG	1 cut(s)	1539
BciVI	GTATCC	2 cut(s)	988, 1897
BclI	TGATCA	1 cut(s)	58
BcnI	CCSGG	4 cut(s)	347, 481, 1133, 1950
BcoDI	GTCTC	5 cut(s)	261, 1070, 1998, 2010, 2681
BfaI	CTAG	6 cut(s)	1004, 1385, 1506, 1526, 1715, 2816
BfmI	CTRYAG	2 cut(s)	1324, 1419
BfrI	CTTAAG	1 cut(s)	2234
BfuAI	ACCTGC	1 cut(s)	1371
BfuI	GTATCC	2 cut(s)	988, 1897
BisI	GCNGC	6 cut(s)	9, 356, 950, 953, 1725, 2560
BlpI	GCTNAGC	1 cut(s)	2360
BlsI	GCNGC	6 cut(s)	10, 357, 951, 954, 1726, 2561
Bme1390I	CCNGG	5 cut(s)	347, 481, 1133, 1539, 1950
Bme18I	GGWCC	1 cut(s)	1211
BmeT110I	CYCGRG	2 cut(s)	84, 2007
BmgT120I	GGNCC	2 cut(s)	1211, 2033
BmiI	GGNNCC	3 cut(s)	1465, 1899, 2716
BmrFI	CCNGG	5 cut(s)	347, 481, 1133, 1539, 1950
BmrI	ACTGGG	1 cut(s)	1461
BmsI	GCATC	6 cut(s)	659, 1338, 1605, 1736, 1791, 2221
BmuI	ACTGGG	1 cut(s)	1461
BpiI	GAAGAC	4 cut(s)	635, 1418, 2057, 2236
Bpu1102I	GCTNAGC	1 cut(s)	2360
BpuEI	CTTGAG	2 cut(s)	1049, 2850
BpuMI	CCSGG	4 cut(s)	347, 481, 1133, 1950
BsaAI	YACGTR	1 cut(s)	1110
BsaHI	GRCGYC	1 cut(s)	1145
BsaJI	CCNNGG	4 cut(s)	345, 2508, 2772, 2829
BsaWI	WCCGGW	1 cut(s)	1900
BsaXI	ACNNNNNCTCC	2 cut(s)	2535, 2565
Bse1I	ACTGG	8 cut(s)	222, 573, 1062, 1155, 1456, 1899, 2206, 2425
Bse3DI	GCAATG	1 cut(s)	359
BseBI	CCWGG	1 cut(s)	1539
BseDI	CCNNGG	4 cut(s)	345, 2508, 2772, 2829
BseMI	GCAATG	1 cut(s)	359
BseMII	CTCAG	7 cut(s)	115, 219, 603, 768, 978, 1081, 2147
BseNI	ACTGG	8 cut(s)	222, 573, 1062, 1155, 1456, 1899, 2206, 2425
BseRI	GAGGAG	1 cut(s)	62
BseXI	GCAGC	3 cut(s)	936, 1711, 2571
BseYI	CCCAGC	2 cut(s)	2045, 2414
Bsh1236I	CGCG	1 cut(s)	1557
BshFI	GGCC	3 cut(s)	66, 355, 2034
BsiHKCI	CYCGRG	2 cut(s)	84, 2007
BsiSI	CCGG	6 cut(s)	44, 347, 480, 1133, 1901, 1950
BslFI	GGGAC	3 cut(s)	146, 315, 1618
BsmAI	GTCTC	5 cut(s)	261, 1070, 1998, 2010, 2681
BsmBI	CGTCTC	1 cut(s)	261
BsmFI	GGGAC	3 cut(s)	146, 315, 1618
BsmI	GAATGC	2 cut(s)	1804, 2785
BsnI	GGCC	3 cut(s)	66, 355, 2034
BsoBI	CYCGRG	2 cut(s)	84, 2007
Bsp1286I	GDGCHC	2 cut(s)	2415, 2866
Bsp1720I	GCTNAGC	1 cut(s)	2360
Bsp19I	CCATGG	1 cut(s)	2508
BspACI	CCGC	8 cut(s)	356, 392, 952, 1557, 1618, 1773, 2467, 2671
BspANI	GGCC	3 cut(s)	66, 355, 2034
BspCNI	CTCAG	7 cut(s)	114, 220, 602, 769, 977, 1080, 2146
BspFNI	CGCG	1 cut(s)	1557
BspHI	TCATGA	1 cut(s)	1182
BspLI	GGNNCC	3 cut(s)	1465, 1899, 2716
BspMAI	CTGCAG	1 cut(s)	1423
BspMI	ACCTGC	1 cut(s)	1371
BspPI	GGATC	7 cut(s)	321, 617, 1015, 1523, 2381, 2423, 2617
BspTI	CTTAAG	1 cut(s)	2234
BsrDI	GCAATG	1 cut(s)	359
BsrI	ACTGG	8 cut(s)	222, 573, 1062, 1155, 1456, 1899, 2206, 2425
BssECI	CCNNGG	4 cut(s)	345, 2508, 2772, 2829
BssNI	GRCGYC	1 cut(s)	1145
BssSI	CACGAG	2 cut(s)	526, 2645
BssT1I	CCWWGG	2 cut(s)	2508, 2829
Bst2BI	CACGAG	2 cut(s)	526, 2645
Bst2UI	CCWGG	1 cut(s)	1539
Bst4CI	ACNGT	6 cut(s)	310, 469, 1249, 1522, 1788, 2800
Bst6I	CTCTTC	4 cut(s)	1948, 2345, 2508, 2646
BstACI	GRCGYC	1 cut(s)	1145
BstAFI	CTTAAG	1 cut(s)	2234
BstAPI	GCANNNNNTGC	1 cut(s)	1810
BstBAI	YACGTR	1 cut(s)	1110
BstC8I	GCNNGC	4 cut(s)	31, 73, 2469, 2564
BstDSI	CCRYGG	2 cut(s)	2508, 2772
BstFNI	CGCG	1 cut(s)	1557
BstHHI	GCGC	1 cut(s)	765
BstMAI	GTCTC	5 cut(s)	261, 1070, 1998, 2010, 2681
BstMWI	GCNNNNNNNGC	7 cut(s)	72, 361, 370, 760, 1810, 2568, 2861
BstNI	CCWGG	1 cut(s)	1539
BstNSI	RCATGY	3 cut(s)	758, 1024, 1267
BstSCI	CCNGG	5 cut(s)	345, 479, 1131, 1537, 1948
BstSFI	CTRYAG	2 cut(s)	1324, 1419
BstUI	CGCG	1 cut(s)	1557
BstV1I	GCAGC	3 cut(s)	936, 1711, 2571
BstV2I	GAAGAC	4 cut(s)	635, 1418, 2057, 2236
BstX2I	RGATCY	2 cut(s)	1007, 2609
BstXI	CCANNNNNNTGG	2 cut(s)	2711, 2881
BstYI	RGATCY	2 cut(s)	1007, 2609
BsuI	GTATCC	2 cut(s)	988, 1897
BsuRI	GGCC	3 cut(s)	66, 355, 2034
BtgI	CCRYGG	2 cut(s)	2508, 2772
BtsI	GCAGTG	2 cut(s)	2274, 2573
BtsIMutI	CAGTG	7 cut(s)	1148, 1313, 1518, 2274, 2375, 2418, 2573
BveI	ACCTGC	1 cut(s)	1371
Cac8I	GCNNGC	4 cut(s)	31, 73, 2469, 2564
CaiI	CAGNNNCTG	1 cut(s)	78
CciI	TCATGA	1 cut(s)	1182
CfoI	GCGC	1 cut(s)	765
Cfr13I	GGNCC	2 cut(s)	1211, 2033
CseI	GACGC	2 cut(s)	1429, 2353
Csp6I	GTAC	4 cut(s)	901, 988, 1014, 1095
CviQI	GTAC	4 cut(s)	901, 988, 1014, 1095
EaeI	YGGCCR	2 cut(s)	64, 353
Eam1104I	CTCTTC	4 cut(s)	1948, 2345, 2508, 2646
EarI	CTCTTC	4 cut(s)	1948, 2345, 2508, 2646
Eco130I	CCWWGG	2 cut(s)	2508, 2829
Eco24I	GRGCYC	2 cut(s)	2415, 2866
Eco32I	GATATC	1 cut(s)	399
Eco47I	GGWCC	1 cut(s)	1211
Eco57I	CTGAAG	1 cut(s)	977
Eco72I	CACGTG	1 cut(s)	1110
Eco88I	CYCGRG	2 cut(s)	84, 2007
EcoRI	GAATTC	2 cut(s)	544, 817
EcoRII	CCWGG	1 cut(s)	1537
EcoRV	GATATC	1 cut(s)	399
EcoT14I	CCWWGG	2 cut(s)	2508, 2829
EcoT22I	ATGCAT	2 cut(s)	1197, 1806
EcoT38I	GRGCYC	2 cut(s)	2415, 2866
ErhI	CCWWGG	2 cut(s)	2508, 2829
Esp3I	CGTCTC	1 cut(s)	261
FaqI	GGGAC	3 cut(s)	146, 315, 1618
FauI	CCCGC	2 cut(s)	1550, 2460
FauNDI	CATATG	2 cut(s)	519, 896
FbaI	TGATCA	1 cut(s)	58
Fnu4HI	GCNGC	6 cut(s)	9, 356, 950, 953, 1725, 2560
FriOI	GRGCYC	2 cut(s)	2415, 2866
Fsp4HI	GCNGC	6 cut(s)	9, 356, 950, 953, 1725, 2560
FspBI	CTAG	6 cut(s)	1004, 1385, 1506, 1526, 1715, 2816
GlaI	GCGC	1 cut(s)	764
GluI	GCNGC	6 cut(s)	9, 356, 950, 953, 1725, 2560
GsaI	CCCAGC	2 cut(s)	2049, 2418
HaeIII	GGCC	3 cut(s)	66, 355, 2034
HapII	CCGG	6 cut(s)	44, 347, 480, 1133, 1901, 1950
HgaI	GACGC	2 cut(s)	1429, 2353
HhaI	GCGC	1 cut(s)	765
Hin1I	GRCGYC	1 cut(s)	1145
Hin6I	GCGC	1 cut(s)	763
HinP1I	GCGC	1 cut(s)	763
HincII	GTYRAC	4 cut(s)	208, 1143, 1882, 2091
HindII	GTYRAC	4 cut(s)	208, 1143, 1882, 2091
HinfI	GANTC	9 cut(s)	50, 82, 376, 434, 593, 1179, 1823, 2276, 2674
HpaII	CCGG	6 cut(s)	44, 347, 480, 1133, 1901, 1950
HphI	GGTGA	5 cut(s)	406, 469, 745, 1217, 2396
Hpy99I	CGWCG	1 cut(s)	2369
HpyAV	CCTTC	8 cut(s)	197, 640, 1001, 1594, 1770, 1870, 2199, 2349
HpyCH4III	ACNGT	6 cut(s)	310, 469, 1249, 1522, 1788, 2800
HpyCH4IV	ACGT	3 cut(s)	405, 1109, 1145
HpyF10VI	GCNNNNNNNGC	7 cut(s)	72, 361, 370, 760, 1810, 2568, 2861
HpySE526I	ACGT	3 cut(s)	405, 1109, 1145
Hsp92I	GRCGYC	1 cut(s)	1145
HspAI	GCGC	1 cut(s)	763
Ksp22I	TGATCA	1 cut(s)	58
LmnI	GCTCC	3 cut(s)	189, 1463, 2209
Lsp1109I	GCAGC	3 cut(s)	936, 1711, 2571
LweI	GCATC	6 cut(s)	659, 1338, 1605, 1736, 1791, 2221
MaeI	CTAG	6 cut(s)	1004, 1385, 1506, 1526, 1715, 2816
MaeII	ACGT	3 cut(s)	405, 1109, 1145
MaeIII	GTNAC	5 cut(s)	463, 803, 1146, 1205, 1634
MflI	RGATCY	2 cut(s)	1007, 2609
MhlI	GDGCHC	2 cut(s)	2415, 2866
MlyI	GAGTC	4 cut(s)	59, 76, 443, 2683
MmeI	TCCRAC	1 cut(s)	1493
Mph1103I	ATGCAT	2 cut(s)	1197, 1806
MseI	TTAA	9 cut(s)	113, 702, 834, 885, 915, 1301, 2064, 2235, 2258
MslI	CAYNNNNRTG	3 cut(s)	38, 66, 2135
MspCI	CTTAAG	1 cut(s)	2234
MspI	CCGG	6 cut(s)	44, 347, 480, 1133, 1901, 1950
MspR9I	CCNGG	5 cut(s)	347, 481, 1133, 1539, 1950
Mva1269I	GAATGC	2 cut(s)	1804, 2785
MvaI	CCWGG	1 cut(s)	1539
MvnI	CGCG	1 cut(s)	1557
MwoI	GCNNNNNNNGC	7 cut(s)	72, 361, 370, 760, 1810, 2568, 2861
NciI	CCSGG	4 cut(s)	347, 481, 1133, 1950
NcoI	CCATGG	1 cut(s)	2508
NdeI	CATATG	2 cut(s)	519, 896
NlaIV	GGNNCC	3 cut(s)	1465, 1899, 2716
NmeAIII	GCCGAG	2 cut(s)	453, 493
NmuCI	GTSAC	3 cut(s)	1146, 1205, 1634
NsiI	ATGCAT	2 cut(s)	1197, 1806
NspI	RCATGY	3 cut(s)	758, 1024, 1267
PaeR7I	CTCGAG	2 cut(s)	84, 2007
PagI	TCATGA	1 cut(s)	1182
PciI	ACATGT	1 cut(s)	1020
PcsI	WCGNNNNNNNCGW	2 cut(s)	270, 644
PctI	GAATGC	2 cut(s)	1804, 2785
PfeI	GAWTC	5 cut(s)	376, 593, 1179, 1823, 2276
PflFI	GACNNNGTC	2 cut(s)	451, 2086
PflMI	CCANNNNNTGG	4 cut(s)	78, 202, 217, 2773
PfoI	TCCNGGA	1 cut(s)	1948
PkrI	GCNGC	6 cut(s)	10, 357, 951, 954, 1726, 2561
PleI	GAGTC	4 cut(s)	58, 76, 442, 2682
PmaCI	CACGTG	1 cut(s)	1110
PmlI	CACGTG	1 cut(s)	1110
PpsI	GAGTC	4 cut(s)	58, 76, 442, 2682
Ppu21I	YACGTR	1 cut(s)	1110
PscI	ACATGT	1 cut(s)	1020
PshBI	ATTAAT	3 cut(s)	702, 834, 2064
Psp6I	CCWGG	1 cut(s)	1537
PspCI	CACGTG	1 cut(s)	1110
PspFI	CCCAGC	2 cut(s)	2045, 2414
PspGI	CCWGG	1 cut(s)	1537
PspN4I	GGNNCC	3 cut(s)	1465, 1899, 2716
PspPI	GGNCC	2 cut(s)	1211, 2033
PspXI	VCTCGAGB	1 cut(s)	84
PstI	CTGCAG	1 cut(s)	1423
PstNI	CAGNNNCTG	1 cut(s)	78
PsuI	RGATCY	2 cut(s)	1007, 2609
PsyI	GACNNNGTC	2 cut(s)	451, 2086
RsaI	GTAC	4 cut(s)	902, 989, 1015, 1096
RsaNI	GTAC	4 cut(s)	901, 988, 1014, 1095
RseI	CAYNNNNRTG	3 cut(s)	38, 66, 2135
SaqAI	TTAA	9 cut(s)	113, 702, 834, 885, 915, 1301, 2064, 2235, 2258
SatI	GCNGC	6 cut(s)	9, 356, 950, 953, 1725, 2560
Sau96I	GGNCC	2 cut(s)	1211, 2033
SchI	GAGTC	4 cut(s)	59, 76, 443, 2683
ScrFI	CCNGG	5 cut(s)	347, 481, 1133, 1539, 1950
SduI	GDGCHC	2 cut(s)	2415, 2866
SfaNI	GCATC	6 cut(s)	659, 1338, 1605, 1736, 1791, 2221
SfcI	CTRYAG	2 cut(s)	1324, 1419
Sfr274I	CTCGAG	2 cut(s)	84, 2007
SinI	GGWCC	1 cut(s)	1211
SlaI	CTCGAG	2 cut(s)	84, 2007
SmiMI	CAYNNNNRTG	3 cut(s)	38, 66, 2135
SmlI	CTYRAG	6 cut(s)	18, 84, 1028, 2007, 2234, 2865
SmoI	CTYRAG	6 cut(s)	18, 84, 1028, 2007, 2234, 2865
SsiI	CCGC	8 cut(s)	356, 392, 952, 1557, 1618, 1773, 2467, 2671
SspMI	CTAG	6 cut(s)	1004, 1385, 1506, 1526, 1715, 2816
StyD4I	CCNGG	5 cut(s)	345, 479, 1131, 1537, 1948
StyI	CCWWGG	2 cut(s)	2508, 2829
TaaI	ACNGT	6 cut(s)	310, 469, 1249, 1522, 1788, 2800
TaiI	ACGT	3 cut(s)	408, 1112, 1148
TaqI	TCGA	3 cut(s)	85, 494, 2008
TauI	GCSGC	2 cut(s)	358, 955
TfiI	GAWTC	5 cut(s)	376, 593, 1179, 1823, 2276
Tru1I	TTAA	9 cut(s)	113, 702, 834, 885, 915, 1301, 2064, 2235, 2258
Tru9I	TTAA	9 cut(s)	113, 702, 834, 885, 915, 1301, 2064, 2235, 2258
TscAI	CASTG	7 cut(s)	1155, 1320, 1525, 2274, 2382, 2425, 2573
TseFI	GTSAC	3 cut(s)	1146, 1205, 1634
TseI	GCWGC	4 cut(s)	8, 949, 1724, 2559
Tsp45I	GTSAC	3 cut(s)	1146, 1205, 1634
TspGWI	ACGGA	6 cut(s)	142, 279, 402, 1224, 1485, 1859
TspRI	CASTG	7 cut(s)	1155, 1320, 1525, 2274, 2382, 2425, 2573
Tth111I	GACNNNGTC	2 cut(s)	451, 2086
Van91I	CCANNNNNTGG	4 cut(s)	78, 202, 217, 2773
Vha464I	CTTAAG	1 cut(s)	2234
VpaK11BI	GGWCC	1 cut(s)	1211
VspI	ATTAAT	3 cut(s)	702, 834, 2064
XapI	RAATTY	8 cut(s)	198, 383, 544, 605, 817, 970, 1304, 1973
XbaI	TCTAGA	1 cut(s)	1525
XceI	RCATGY	3 cut(s)	758, 1024, 1267
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1069
XhoI	CTCGAG	2 cut(s)	84, 2007
XspI	CTAG	6 cut(s)	1004, 1385, 1506, 1526, 1715, 2816
ZraI	GACGTC	1 cut(s)	1146
Zsp2I	ATGCAT	2 cut(s)	1197, 1806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.