ABC transporter A family member
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC2_membrane_3 | PF12698 | 265 - 553 | 2.3e-10 | ABC-2 family transporter protein |
| ABC_tran | PF00005 | 652 - 790 | 2.5e-23 | ABC transporter |
| AAA_21 | PF13304 | 760 - 822 | 1.3e-07 | AAA domain, putative AbiEii toxin, Type IV TA system |
| ABCA12_C | PF24526 | 856 - 906 | 1.8e-26 | ABCA12-like, C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 4 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2066, 2725 |
| AccBSI | CCGCTC | 2 cut(s) | 90, 873 |
| AccI | GTMKAC | 1 cut(s) | 2652 |
| AccII | CGCG | 2 cut(s) | 910, 1886 |
| AclI | AACGTT | 1 cut(s) | 1359 |
| AcsI | RAATTY | 8 cut(s) | 445, 601, 739, 1257, 1312, 1529, 1579, 2496 |
| AcuI | CTGAAG | 3 cut(s) | 186, 1560, 2564 |
| AcyI | GRCGYC | 2 cut(s) | 5, 1769 |
| AfaI | GTAC | 7 cut(s) | 765, 824, 1109, 1214, 1549, 1876, 2371 |
| AflIII | ACRYGT | 1 cut(s) | 531 |
| AgsI | TTSAA | 8 cut(s) | 445, 659, 808, 831, 838, 952, 1430, 2236 |
| AjnI | CCWGG | 2 cut(s) | 1489, 1918 |
| Alw21I | GWGCWC | 1 cut(s) | 1780 |
| Alw26I | GTCTC | 3 cut(s) | 1503, 1579, 2771 |
| Alw44I | GTGCAC | 1 cut(s) | 1776 |
| AoxI | GGCC | 1 cut(s) | 924 |
| ApaLI | GTGCAC | 1 cut(s) | 1776 |
| ApeKI | GCWGC | 9 cut(s) | 20, 140, 583, 973, 1340, 1343, 1722, 2683, 2732 |
| ApoI | RAATTY | 8 cut(s) | 445, 601, 739, 1257, 1312, 1529, 1579, 2496 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2682, 2714 |
| AseI | ATTAAT | 1 cut(s) | 756 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 803, 1425, 2249 |
| AspLEI | GCGC | 4 cut(s) | 7, 493, 588, 687 |
| AspS9I | GGNCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| AsuC2I | CCSGG | 2 cut(s) | 377, 1405 |
| AsuHPI | GGTGA | 6 cut(s) | 482, 510, 588, 1169, 1525, 2625 |
| AvaII | GGWCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| BaeGI | GKGCMC | 1 cut(s) | 1780 |
| BamHI | GGATCC | 1 cut(s) | 2338 |
| BanI | GGYRCC | 1 cut(s) | 4 |
| BanII | GRGCYC | 1 cut(s) | 259 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 372, 404, 2336, 2368 |
| BauI | CACGAG | 1 cut(s) | 1977 |
| BbsI | GAAGAC | 3 cut(s) | 2027, 2707, 2785 |
| Bbv12I | GWGCWC | 1 cut(s) | 1780 |
| BbvCI | CCTCAGC | 1 cut(s) | 240 |
| BbvI | GCAGC | 9 cut(s) | 7, 127, 595, 960, 1330, 1352, 1709, 2670, 2719 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1968, 2002 |
| BciT130I | CCWGG | 2 cut(s) | 1491, 1920 |
| BciVI | GTATCC | 1 cut(s) | 1926 |
| BcnI | CCSGG | 2 cut(s) | 377, 1405 |
| BcoDI | GTCTC | 3 cut(s) | 1503, 1579, 2771 |
| BfaI | CTAG | 8 cut(s) | 279, 1337, 1458, 1773, 2367, 2378, 2492, 2550 |
| BfmI | CTRYAG | 3 cut(s) | 155, 1206, 1794 |
| BfoI | RGCGCY | 2 cut(s) | 8, 589 |
| BfuI | GTATCC | 1 cut(s) | 1926 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 682 |
| BlpI | GCTNAGC | 2 cut(s) | 869, 2312 |
| BmcAI | AGTACT | 3 cut(s) | 765, 1549, 2371 |
| Bme1390I | CCNGG | 4 cut(s) | 377, 1405, 1491, 1920 |
| Bme18I | GGWCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| BmgT120I | GGNCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| BmiI | GGNNCC | 7 cut(s) | 6, 258, 772, 1009, 1165, 2005, 2340 |
| BmrFI | CCNGG | 4 cut(s) | 377, 1405, 1491, 1920 |
| BmrI | ACTGGG | 1 cut(s) | 405 |
| BmsI | GCATC | 2 cut(s) | 1011, 1557 |
| BmuI | ACTGGG | 1 cut(s) | 405 |
| BpiI | GAAGAC | 3 cut(s) | 2027, 2707, 2785 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2427, 2459 |
| BpmI | CTGGAG | 2 cut(s) | 864, 913 |
| Bpu10I | CCTNAGC | 1 cut(s) | 240 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 869, 2312 |
| BpuEI | CTTGAG | 4 cut(s) | 231, 507, 1499, 1815 |
| BpuMI | CCSGG | 2 cut(s) | 377, 1405 |
| BsaHI | GRCGYC | 2 cut(s) | 5, 1769 |
| BsaI | GGTCTC | 1 cut(s) | 2771 |
| BsaJI | CCNNGG | 1 cut(s) | 2460 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 74, 104, 334, 364 |
| Bse1I | ACTGG | 8 cut(s) | 400, 554, 620, 930, 1285, 1469, 2176, 2377 |
| BseBI | CCWGG | 2 cut(s) | 1491, 1920 |
| BseDI | CCNNGG | 1 cut(s) | 2460 |
| BseMII | CTCAG | 9 cut(s) | 50, 67, 254, 804, 860, 1141, 1929, 2117, 2676 |
| BseNI | ACTGG | 8 cut(s) | 400, 554, 620, 930, 1285, 1469, 2176, 2377 |
| BseRI | GAGGAG | 1 cut(s) | 358 |
| BseSI | GKGCMC | 1 cut(s) | 1780 |
| BseXI | GCAGC | 9 cut(s) | 7, 127, 595, 960, 1330, 1352, 1709, 2670, 2719 |
| BseYI | CCCAGC | 2 cut(s) | 878, 2279 |
| BsgI | GTGCAG | 4 cut(s) | 312, 602, 933, 2034 |
| Bsh1236I | CGCG | 2 cut(s) | 910, 1886 |
| BshFI | GGCC | 1 cut(s) | 926 |
| BshNI | GGYRCC | 1 cut(s) | 4 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1780 |
| BsiSI | CCGG | 5 cut(s) | 8, 326, 340, 377, 1404 |
| BslFI | GGGAC | 5 cut(s) | 216, 1570, 1780, 1989, 2680 |
| BsmAI | GTCTC | 3 cut(s) | 1503, 1579, 2771 |
| BsmFI | GGGAC | 5 cut(s) | 216, 1570, 1780, 1989, 2680 |
| BsmI | GAATGC | 1 cut(s) | 1991 |
| BsnI | GGCC | 1 cut(s) | 926 |
| Bso31I | GGTCTC | 1 cut(s) | 2771 |
| Bsp1286I | GDGCHC | 2 cut(s) | 259, 1780 |
| Bsp1407I | TGTACA | 1 cut(s) | 1212 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 869, 2312 |
| Bsp19I | CCATGG | 1 cut(s) | 2460 |
| BspANI | GGCC | 1 cut(s) | 926 |
| BspCNI | CTCAG | 9 cut(s) | 49, 66, 253, 803, 861, 1140, 1930, 2116, 2675 |
| BspFNI | CGCG | 2 cut(s) | 910, 1886 |
| BspHI | TCATGA | 3 cut(s) | 538, 1134, 2596 |
| BspLI | GGNNCC | 7 cut(s) | 6, 258, 772, 1009, 1165, 2005, 2340 |
| BspMAI | CTGCAG | 1 cut(s) | 159 |
| BspQI | GCTCTTC | 1 cut(s) | 1085 |
| BspT107I | GGYRCC | 1 cut(s) | 4 |
| BspTNI | GGTCTC | 1 cut(s) | 2771 |
| BsrBI | CCGCTC | 2 cut(s) | 90, 873 |
| BsrGI | TGTACA | 1 cut(s) | 1212 |
| BsrI | ACTGG | 8 cut(s) | 400, 554, 620, 930, 1285, 1469, 2176, 2377 |
| BssECI | CCNNGG | 1 cut(s) | 2460 |
| BssNAI | GTATAC | 1 cut(s) | 2653 |
| BssNI | GRCGYC | 2 cut(s) | 5, 1769 |
| BssSI | CACGAG | 1 cut(s) | 1977 |
| BssT1I | CCWWGG | 1 cut(s) | 2460 |
| Bst1107I | GTATAC | 1 cut(s) | 2653 |
| Bst2BI | CACGAG | 1 cut(s) | 1977 |
| Bst2UI | CCWGG | 2 cut(s) | 1491, 1920 |
| Bst6I | CTCTTC | 7 cut(s) | 1058, 1085, 1918, 2220, 2231, 2297, 2460 |
| BstACI | GRCGYC | 2 cut(s) | 5, 1769 |
| BstAUI | TGTACA | 1 cut(s) | 1212 |
| BstC8I | GCNNGC | 3 cut(s) | 25, 912, 1997 |
| BstDSI | CCRYGG | 1 cut(s) | 2460 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1907 |
| BstFNI | CGCG | 2 cut(s) | 910, 1886 |
| BstH2I | RGCGCY | 2 cut(s) | 8, 589 |
| BstHHI | GCGC | 4 cut(s) | 7, 493, 588, 687 |
| BstMAI | GTCTC | 3 cut(s) | 1503, 1579, 2771 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 682, 907, 932, 1337, 2729, 2813 |
| BstNI | CCWGG | 2 cut(s) | 1491, 1920 |
| BstNSI | RCATGY | 3 cut(s) | 535, 1219, 1999 |
| BstSCI | CCNGG | 4 cut(s) | 375, 1403, 1489, 1918 |
| BstSFI | CTRYAG | 3 cut(s) | 155, 1206, 1794 |
| BstSLI | GKGCMC | 1 cut(s) | 1780 |
| BstUI | CGCG | 2 cut(s) | 910, 1886 |
| BstV1I | GCAGC | 9 cut(s) | 7, 127, 595, 960, 1330, 1352, 1709, 2670, 2719 |
| BstV2I | GAAGAC | 3 cut(s) | 2027, 2707, 2785 |
| BstX2I | RGATCY | 5 cut(s) | 197, 1444, 1790, 2338, 2380 |
| BstYI | RGATCY | 5 cut(s) | 197, 1444, 1790, 2338, 2380 |
| BstZ17I | GTATAC | 1 cut(s) | 2653 |
| BsuI | GTATCC | 1 cut(s) | 1926 |
| BsuRI | GGCC | 1 cut(s) | 926 |
| BtgI | CCRYGG | 1 cut(s) | 2460 |
| BtgZI | GCGATG | 2 cut(s) | 1340, 1585 |
| BtsI | GCAGTG | 4 cut(s) | 589, 921, 1956, 2525 |
| BtsIMutI | CAGTG | 7 cut(s) | 589, 921, 937, 1956, 2525, 2757, 2769 |
| Cac8I | GCNNGC | 3 cut(s) | 25, 912, 1997 |
| CciI | TCATGA | 3 cut(s) | 538, 1134, 2596 |
| CfoI | GCGC | 4 cut(s) | 7, 493, 588, 687 |
| Cfr13I | GGNCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| CseI | GACGC | 2 cut(s) | 1777, 2305 |
| Csp6I | GTAC | 7 cut(s) | 764, 823, 1108, 1213, 1548, 1875, 2370 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1533, 1568, 2202, 2237 |
| CviQI | GTAC | 7 cut(s) | 764, 823, 1108, 1213, 1548, 1875, 2370 |
| DinI | GGCGCC | 1 cut(s) | 6 |
| Eam1104I | CTCTTC | 7 cut(s) | 1058, 1085, 1918, 2220, 2231, 2297, 2460 |
| EarI | CTCTTC | 7 cut(s) | 1058, 1085, 1918, 2220, 2231, 2297, 2460 |
| Eco130I | CCWWGG | 1 cut(s) | 2460 |
| Eco24I | GRGCYC | 1 cut(s) | 259 |
| Eco31I | GGTCTC | 1 cut(s) | 2771 |
| Eco47I | GGWCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| Eco57I | CTGAAG | 3 cut(s) | 186, 1560, 2564 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1907 |
| EcoRI | GAATTC | 3 cut(s) | 445, 739, 1529 |
| EcoRII | CCWGG | 2 cut(s) | 1489, 1918 |
| EcoT14I | CCWWGG | 1 cut(s) | 2460 |
| EcoT22I | ATGCAT | 1 cut(s) | 1149 |
| EcoT38I | GRGCYC | 1 cut(s) | 259 |
| EgeI | GGCGCC | 1 cut(s) | 6 |
| EheI | GGCGCC | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 2460 |
| FaqI | GGGAC | 5 cut(s) | 216, 1570, 1780, 1989, 2680 |
| FauI | CCCGC | 2 cut(s) | 462, 866 |
| FauNDI | CATATG | 1 cut(s) | 2077 |
| FblI | GTMKAC | 1 cut(s) | 2652 |
| FriOI | GRGCYC | 1 cut(s) | 259 |
| FspBI | CTAG | 8 cut(s) | 279, 1337, 1458, 1773, 2367, 2378, 2492, 2550 |
| GlaI | GCGC | 4 cut(s) | 6, 492, 587, 686 |
| GsaI | CCCAGC | 2 cut(s) | 882, 2283 |
| GsuI | CTGGAG | 2 cut(s) | 864, 913 |
| HaeII | RGCGCY | 2 cut(s) | 8, 589 |
| HaeIII | GGCC | 1 cut(s) | 926 |
| HapII | CCGG | 5 cut(s) | 8, 326, 340, 377, 1404 |
| HgaI | GACGC | 2 cut(s) | 1777, 2305 |
| HhaI | GCGC | 4 cut(s) | 7, 493, 588, 687 |
| Hin1I | GRCGYC | 2 cut(s) | 5, 1769 |
| Hin6I | GCGC | 4 cut(s) | 5, 491, 586, 685 |
| HinP1I | GCGC | 4 cut(s) | 5, 491, 586, 685 |
| HindIII | AAGCTT | 1 cut(s) | 832 |
| HpaII | CCGG | 5 cut(s) | 8, 326, 340, 377, 1404 |
| HphI | GGTGA | 6 cut(s) | 482, 510, 588, 1169, 1525, 2625 |
| Hpy166II | GTNNAC | 9 cut(s) | 169, 706, 1049, 1108, 1213, 1778, 2141, 2353, 2653 |
| Hpy8I | GTNNAC | 9 cut(s) | 169, 706, 1049, 1108, 1213, 1778, 2141, 2353, 2653 |
| Hpy99I | CGWCG | 1 cut(s) | 2321 |
| HpyAV | CCTTC | 4 cut(s) | 1837, 2169, 2301, 2338 |
| HpyCH4IV | ACGT | 1 cut(s) | 1359 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 682, 907, 932, 1337, 2729, 2813 |
| HpySE526I | ACGT | 1 cut(s) | 1359 |
| Hsp92I | GRCGYC | 2 cut(s) | 5, 1769 |
| HspAI | GCGC | 4 cut(s) | 5, 491, 586, 685 |
| KasI | GGCGCC | 1 cut(s) | 4 |
| LguI | GCTCTTC | 1 cut(s) | 1085 |
| LmnI | GCTCC | 5 cut(s) | 10, 95, 262, 770, 2179 |
| Lsp1109I | GCAGC | 9 cut(s) | 7, 127, 595, 960, 1330, 1352, 1709, 2670, 2719 |
| LweI | GCATC | 2 cut(s) | 1011, 1557 |
| MaeI | CTAG | 8 cut(s) | 279, 1337, 1458, 1773, 2367, 2378, 2492, 2550 |
| MaeII | ACGT | 1 cut(s) | 1359 |
| MaeIII | GTNAC | 8 cut(s) | 270, 379, 565, 725, 1382, 1825, 1880, 2698 |
| MbiI | CCGCTC | 2 cut(s) | 90, 873 |
| MflI | RGATCY | 5 cut(s) | 197, 1444, 1790, 2338, 2380 |
| MhlI | GDGCHC | 2 cut(s) | 259, 1780 |
| Mly113I | GGCGCC | 1 cut(s) | 5 |
| MlyI | GAGTC | 5 cut(s) | 28, 341, 2095, 2237, 2652 |
| MmeI | TCCRAC | 2 cut(s) | 810, 1380 |
| Mph1103I | ATGCAT | 1 cut(s) | 1149 |
| MroXI | GAANNNNTTC | 3 cut(s) | 803, 1425, 2249 |
| MseI | TTAA | 8 cut(s) | 65, 110, 666, 756, 1253, 1362, 1484, 2447 |
| MslI | CAYNNNNRTG | 2 cut(s) | 543, 1628 |
| MspA1I | CMGCKG | 3 cut(s) | 20, 467, 1343 |
| MspI | CCGG | 5 cut(s) | 8, 326, 340, 377, 1404 |
| MspR9I | CCNGG | 4 cut(s) | 377, 1405, 1491, 1920 |
| Mva1269I | GAATGC | 1 cut(s) | 1991 |
| MvaI | CCWGG | 2 cut(s) | 1491, 1920 |
| MvnI | CGCG | 2 cut(s) | 910, 1886 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 682, 907, 932, 1337, 2729, 2813 |
| NarI | GGCGCC | 1 cut(s) | 5 |
| NciI | CCSGG | 2 cut(s) | 377, 1405 |
| NcoI | CCATGG | 1 cut(s) | 2460 |
| NdeI | CATATG | 1 cut(s) | 2077 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 258, 772, 1009, 1165, 2005, 2340 |
| NmuCI | GTSAC | 3 cut(s) | 565, 1880, 2698 |
| NsiI | ATGCAT | 1 cut(s) | 1149 |
| NspI | RCATGY | 3 cut(s) | 535, 1219, 1999 |
| PaeI | GCATGC | 1 cut(s) | 1999 |
| PagI | TCATGA | 3 cut(s) | 538, 1134, 2596 |
| PciI | ACATGT | 1 cut(s) | 531 |
| PciSI | GCTCTTC | 1 cut(s) | 1085 |
| PctI | GAATGC | 1 cut(s) | 1991 |
| PdmI | GAANNNNTTC | 3 cut(s) | 803, 1425, 2249 |
| PfeI | GAWTC | 6 cut(s) | 512, 887, 919, 1131, 2208, 2245 |
| PflFI | GACNNNGTC | 1 cut(s) | 37 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2066, 2725 |
| PfoI | TCCNGGA | 1 cut(s) | 1918 |
| PleI | GAGTC | 5 cut(s) | 28, 340, 2095, 2236, 2652 |
| PluTI | GGCGCC | 1 cut(s) | 8 |
| PpsI | GAGTC | 5 cut(s) | 28, 340, 2095, 2236, 2652 |
| PscI | ACATGT | 1 cut(s) | 531 |
| PshBI | ATTAAT | 1 cut(s) | 756 |
| Psp1406I | AACGTT | 1 cut(s) | 1359 |
| Psp6I | CCWGG | 2 cut(s) | 1489, 1918 |
| PspFI | CCCAGC | 2 cut(s) | 878, 2279 |
| PspGI | CCWGG | 2 cut(s) | 1489, 1918 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 258, 772, 1009, 1165, 2005, 2340 |
| PspPI | GGNCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| PstI | CTGCAG | 1 cut(s) | 159 |
| PsuI | RGATCY | 5 cut(s) | 197, 1444, 1790, 2338, 2380 |
| PsyI | GACNNNGTC | 1 cut(s) | 37 |
| PvuII | CAGCTG | 1 cut(s) | 1343 |
| RsaI | GTAC | 7 cut(s) | 765, 824, 1109, 1214, 1549, 1876, 2371 |
| RsaNI | GTAC | 7 cut(s) | 764, 823, 1108, 1213, 1548, 1875, 2370 |
| RseI | CAYNNNNRTG | 2 cut(s) | 543, 1628 |
| SapI | GCTCTTC | 1 cut(s) | 1085 |
| SaqAI | TTAA | 8 cut(s) | 65, 110, 666, 756, 1253, 1362, 1484, 2447 |
| Sau96I | GGNCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| ScaI | AGTACT | 3 cut(s) | 765, 1549, 2371 |
| SchI | GAGTC | 5 cut(s) | 28, 341, 2095, 2237, 2652 |
| ScrFI | CCNGG | 4 cut(s) | 377, 1405, 1491, 1920 |
| SduI | GDGCHC | 2 cut(s) | 259, 1780 |
| SfaNI | GCATC | 2 cut(s) | 1011, 1557 |
| SfcI | CTRYAG | 3 cut(s) | 155, 1206, 1794 |
| SfoI | GGCGCC | 1 cut(s) | 6 |
| SinI | GGWCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 543, 1628 |
| SmlI | CTYRAG | 4 cut(s) | 246, 522, 1478, 1830 |
| SmoI | CTYRAG | 4 cut(s) | 246, 522, 1478, 1830 |
| SphI | GCATGC | 1 cut(s) | 1999 |
| SspDI | GGCGCC | 1 cut(s) | 4 |
| SspI | AATATT | 1 cut(s) | 651 |
| SspMI | CTAG | 8 cut(s) | 279, 1337, 1458, 1773, 2367, 2378, 2492, 2550 |
| StyD4I | CCNGG | 4 cut(s) | 375, 1403, 1489, 1918 |
| StyI | CCWWGG | 1 cut(s) | 2460 |
| TaiI | ACGT | 1 cut(s) | 1362 |
| TaqI | TCGA | 2 cut(s) | 625, 2488 |
| TaqII | GACCGA | 1 cut(s) | 2448 |
| TatI | WGTACW | 5 cut(s) | 763, 1212, 1547, 1874, 2369 |
| TauI | GCSGC | 4 cut(s) | 904, 2075, 2423, 2743 |
| TfiI | GAWTC | 6 cut(s) | 512, 887, 919, 1131, 2208, 2245 |
| Tru1I | TTAA | 8 cut(s) | 65, 110, 666, 756, 1253, 1362, 1484, 2447 |
| Tru9I | TTAA | 8 cut(s) | 65, 110, 666, 756, 1253, 1362, 1484, 2447 |
| TscAI | CASTG | 7 cut(s) | 596, 921, 937, 1956, 2525, 2757, 2776 |
| TseFI | GTSAC | 3 cut(s) | 565, 1880, 2698 |
| TseI | GCWGC | 9 cut(s) | 20, 140, 583, 973, 1340, 1343, 1722, 2683, 2732 |
| Tsp45I | GTSAC | 3 cut(s) | 565, 1880, 2698 |
| TspRI | CASTG | 7 cut(s) | 596, 921, 937, 1956, 2525, 2757, 2776 |
| Tth111I | GACNNNGTC | 1 cut(s) | 37 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2066, 2725 |
| VneI | GTGCAC | 1 cut(s) | 1776 |
| VpaK11BI | GGWCC | 4 cut(s) | 1046, 1163, 2003, 2431 |
| VspI | ATTAAT | 1 cut(s) | 756 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1907 |
| XapI | RAATTY | 8 cut(s) | 445, 601, 739, 1257, 1312, 1529, 1579, 2496 |
| XbaI | TCTAGA | 2 cut(s) | 278, 2549 |
| XceI | RCATGY | 3 cut(s) | 535, 1219, 1999 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 100, 2458 |
| XmiI | GTMKAC | 1 cut(s) | 2652 |
| XmnI | GAANNNNTTC | 3 cut(s) | 803, 1425, 2249 |
| XspI | CTAG | 8 cut(s) | 279, 1337, 1458, 1773, 2367, 2378, 2492, 2550 |
| ZrmI | AGTACT | 3 cut(s) | 765, 1549, 2371 |
| Zsp2I | ATGCAT | 1 cut(s) | 1149 |