ABC transporter A family member
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC2_membrane_3 | PF12698 | 285 - 571 | 6.9e-14 | ABC-2 family transporter protein |
| ABC_tran | PF00005 | 662 - 806 | 6.1e-25 | ABC transporter |
| AAA_21 | PF13304 | 778 - 838 | 2.9e-08 | AAA domain, putative AbiEii toxin, Type IV TA system |
| ABCA12_C | PF24526 | 872 - 922 | 1.1e-31 | ABCA12-like, C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1148 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 202, 217, 2773 |
| AccBSI | CCGCTC | 1 cut(s) | 2309 |
| AccI | GTMKAC | 1 cut(s) | 178 |
| AccII | CGCG | 1 cut(s) | 1557 |
| AciI | CCGC | 8 cut(s) | 356, 392, 952, 1557, 1773, 2309, 2467, 2671 |
| AclWI | GGATC | 8 cut(s) | 321, 460, 617, 1015, 1523, 2381, 2423, 2617 |
| AcoI | YGGCCR | 1 cut(s) | 353 |
| AcsI | RAATTY | 6 cut(s) | 198, 544, 817, 970, 1304, 1973 |
| AcuI | CTGAAG | 2 cut(s) | 977, 1848 |
| AcvI | CACGTG | 1 cut(s) | 1110 |
| AcyI | GRCGYC | 1 cut(s) | 1145 |
| AfaI | GTAC | 4 cut(s) | 902, 989, 1015, 1096 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 202, 217, 351, 1590, 1859, 1986, 2188, 2420, 2773 |
| AflII | CTTAAG | 1 cut(s) | 2234 |
| AflIII | ACRYGT | 2 cut(s) | 1020, 1107 |
| AjnI | CCWGG | 3 cut(s) | 625, 1537, 1948 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 305, 337 |
| Alw26I | GTCTC | 5 cut(s) | 261, 1070, 1998, 2010, 2681 |
| AlwI | GGATC | 8 cut(s) | 321, 460, 617, 1015, 1523, 2381, 2423, 2617 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 78 |
| Ama87I | CYCGRG | 1 cut(s) | 2007 |
| AoxI | GGCC | 2 cut(s) | 353, 2032 |
| ApeKI | GCWGC | 3 cut(s) | 949, 1724, 2559 |
| ApoI | RAATTY | 6 cut(s) | 198, 544, 817, 970, 1304, 1973 |
| AseI | ATTAAT | 3 cut(s) | 702, 834, 2064 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 521 |
| AspLEI | GCGC | 1 cut(s) | 765 |
| AspS9I | GGNCC | 2 cut(s) | 1211, 2033 |
| AsuC2I | CCSGG | 3 cut(s) | 347, 481, 1133 |
| AsuHPI | GGTGA | 5 cut(s) | 406, 469, 745, 1217, 2396 |
| AvaI | CYCGRG | 1 cut(s) | 2007 |
| AvaII | GGWCC | 1 cut(s) | 1211 |
| BanII | GRGCYC | 2 cut(s) | 2415, 2866 |
| BbrPI | CACGTG | 1 cut(s) | 1110 |
| BbsI | GAAGAC | 4 cut(s) | 635, 1418, 2057, 2236 |
| BbvI | GCAGC | 3 cut(s) | 936, 1711, 2571 |
| BccI | CCATC | 7 cut(s) | 490, 1604, 1864, 1952, 2131, 2549, 2712 |
| BceAI | ACGGC | 4 cut(s) | 1392, 1964, 2118, 2756 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1998, 2032 |
| BciT130I | CCWGG | 3 cut(s) | 627, 1539, 1950 |
| BciVI | GTATCC | 2 cut(s) | 988, 1897 |
| BclI | TGATCA | 1 cut(s) | 58 |
| BcnI | CCSGG | 3 cut(s) | 347, 481, 1133 |
| BcoDI | GTCTC | 5 cut(s) | 261, 1070, 1998, 2010, 2681 |
| BfaI | CTAG | 6 cut(s) | 1004, 1385, 1506, 1526, 1715, 2816 |
| BfmI | CTRYAG | 3 cut(s) | 79, 1324, 1419 |
| BfrI | CTTAAG | 1 cut(s) | 2234 |
| BfuI | GTATCC | 2 cut(s) | 988, 1897 |
| BisI | GCNGC | 5 cut(s) | 356, 950, 953, 1725, 2560 |
| BlpI | GCTNAGC | 1 cut(s) | 2360 |
| BlsI | GCNGC | 5 cut(s) | 357, 951, 954, 1726, 2561 |
| Bme1390I | CCNGG | 6 cut(s) | 347, 481, 627, 1133, 1539, 1950 |
| Bme18I | GGWCC | 1 cut(s) | 1211 |
| BmeT110I | CYCGRG | 1 cut(s) | 2007 |
| BmgT120I | GGNCC | 2 cut(s) | 1211, 2033 |
| BmiI | GGNNCC | 4 cut(s) | 1465, 1824, 1899, 2716 |
| BmrFI | CCNGG | 6 cut(s) | 347, 481, 627, 1133, 1539, 1950 |
| BmrI | ACTGGG | 1 cut(s) | 1461 |
| BmsI | GCATC | 5 cut(s) | 659, 1338, 1736, 1791, 2221 |
| BmuI | ACTGGG | 1 cut(s) | 1461 |
| BpiI | GAAGAC | 4 cut(s) | 635, 1418, 2057, 2236 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2360 |
| BpuEI | CTTGAG | 2 cut(s) | 1049, 2850 |
| BpuMI | CCSGG | 3 cut(s) | 347, 481, 1133 |
| BsaAI | YACGTR | 1 cut(s) | 1110 |
| BsaHI | GRCGYC | 1 cut(s) | 1145 |
| BsaJI | CCNNGG | 4 cut(s) | 345, 2508, 2772, 2829 |
| BsaWI | WCCGGW | 1 cut(s) | 1900 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2535, 2565 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 202, 217, 351, 1590, 1859, 1986, 2188, 2420, 2773 |
| Bse1I | ACTGG | 7 cut(s) | 222, 573, 1155, 1456, 1899, 2206, 2425 |
| Bse3DI | GCAATG | 1 cut(s) | 359 |
| BseBI | CCWGG | 3 cut(s) | 627, 1539, 1950 |
| BseDI | CCNNGG | 4 cut(s) | 345, 2508, 2772, 2829 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 202, 217, 351, 1590, 1859, 1986, 2188, 2420, 2773 |
| BseMI | GCAATG | 1 cut(s) | 359 |
| BseMII | CTCAG | 8 cut(s) | 115, 219, 527, 603, 768, 978, 1081, 2147 |
| BseNI | ACTGG | 7 cut(s) | 222, 573, 1155, 1456, 1899, 2206, 2425 |
| BseRI | GAGGAG | 1 cut(s) | 62 |
| BseXI | GCAGC | 3 cut(s) | 936, 1711, 2571 |
| BseYI | CCCAGC | 2 cut(s) | 2045, 2414 |
| Bsh1236I | CGCG | 1 cut(s) | 1557 |
| BshFI | GGCC | 2 cut(s) | 355, 2034 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2007 |
| BsiSI | CCGG | 5 cut(s) | 44, 347, 480, 1133, 1901 |
| BslFI | GGGAC | 3 cut(s) | 146, 315, 1618 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 202, 217, 351, 1590, 1859, 1986, 2188, 2420, 2773 |
| BsmAI | GTCTC | 5 cut(s) | 261, 1070, 1998, 2010, 2681 |
| BsmBI | CGTCTC | 1 cut(s) | 261 |
| BsmFI | GGGAC | 3 cut(s) | 146, 315, 1618 |
| BsmI | GAATGC | 3 cut(s) | 1620, 1804, 2785 |
| BsnI | GGCC | 2 cut(s) | 355, 2034 |
| BsoBI | CYCGRG | 1 cut(s) | 2007 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2415, 2866 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2360 |
| Bsp19I | CCATGG | 1 cut(s) | 2508 |
| BspACI | CCGC | 8 cut(s) | 356, 392, 952, 1557, 1773, 2309, 2467, 2671 |
| BspANI | GGCC | 2 cut(s) | 355, 2034 |
| BspCNI | CTCAG | 8 cut(s) | 114, 220, 526, 602, 769, 977, 1080, 2146 |
| BspFNI | CGCG | 1 cut(s) | 1557 |
| BspHI | TCATGA | 2 cut(s) | 1182, 2644 |
| BspLI | GGNNCC | 4 cut(s) | 1465, 1824, 1899, 2716 |
| BspMAI | CTGCAG | 1 cut(s) | 1423 |
| BspPI | GGATC | 8 cut(s) | 321, 460, 617, 1015, 1523, 2381, 2423, 2617 |
| BspTI | CTTAAG | 1 cut(s) | 2234 |
| BsrBI | CCGCTC | 1 cut(s) | 2309 |
| BsrDI | GCAATG | 1 cut(s) | 359 |
| BsrI | ACTGG | 7 cut(s) | 222, 573, 1155, 1456, 1899, 2206, 2425 |
| BssECI | CCNNGG | 4 cut(s) | 345, 2508, 2772, 2829 |
| BssNAI | GTATAC | 1 cut(s) | 179 |
| BssNI | GRCGYC | 1 cut(s) | 1145 |
| BssT1I | CCWWGG | 2 cut(s) | 2508, 2829 |
| Bst1107I | GTATAC | 1 cut(s) | 179 |
| Bst2UI | CCWGG | 3 cut(s) | 627, 1539, 1950 |
| Bst4CI | ACNGT | 6 cut(s) | 13, 310, 469, 1249, 1522, 1788 |
| Bst6I | CTCTTC | 4 cut(s) | 1948, 2345, 2508, 2646 |
| BstACI | GRCGYC | 1 cut(s) | 1145 |
| BstAFI | CTTAAG | 1 cut(s) | 2234 |
| BstBAI | YACGTR | 1 cut(s) | 1110 |
| BstC8I | GCNNGC | 4 cut(s) | 31, 73, 2469, 2564 |
| BstDSI | CCRYGG | 2 cut(s) | 2508, 2772 |
| BstFNI | CGCG | 1 cut(s) | 1557 |
| BstHHI | GCGC | 1 cut(s) | 765 |
| BstMAI | GTCTC | 5 cut(s) | 261, 1070, 1998, 2010, 2681 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 361, 370, 760, 1810, 2568, 2861 |
| BstNI | CCWGG | 3 cut(s) | 627, 1539, 1950 |
| BstNSI | RCATGY | 3 cut(s) | 758, 1024, 1267 |
| BstSCI | CCNGG | 6 cut(s) | 345, 479, 625, 1131, 1537, 1948 |
| BstSFI | CTRYAG | 3 cut(s) | 79, 1324, 1419 |
| BstUI | CGCG | 1 cut(s) | 1557 |
| BstV1I | GCAGC | 3 cut(s) | 936, 1711, 2571 |
| BstV2I | GAAGAC | 4 cut(s) | 635, 1418, 2057, 2236 |
| BstX2I | RGATCY | 3 cut(s) | 452, 1007, 2609 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2711, 2881 |
| BstYI | RGATCY | 3 cut(s) | 452, 1007, 2609 |
| BstZ17I | GTATAC | 1 cut(s) | 179 |
| BsuI | GTATCC | 2 cut(s) | 988, 1897 |
| BsuRI | GGCC | 2 cut(s) | 355, 2034 |
| BtgI | CCRYGG | 2 cut(s) | 2508, 2772 |
| BtsI | GCAGTG | 3 cut(s) | 1625, 2274, 2573 |
| BtsIMutI | CAGTG | 9 cut(s) | 580, 1148, 1313, 1518, 1625, 2274, 2375, 2418, 2573 |
| Cac8I | GCNNGC | 4 cut(s) | 31, 73, 2469, 2564 |
| CaiI | CAGNNNCTG | 1 cut(s) | 78 |
| CciI | TCATGA | 2 cut(s) | 1182, 2644 |
| CfoI | GCGC | 1 cut(s) | 765 |
| Cfr13I | GGNCC | 2 cut(s) | 1211, 2033 |
| CseI | GACGC | 2 cut(s) | 1429, 2353 |
| Csp6I | GTAC | 4 cut(s) | 901, 988, 1014, 1095 |
| CviQI | GTAC | 4 cut(s) | 901, 988, 1014, 1095 |
| EaeI | YGGCCR | 1 cut(s) | 353 |
| Eam1104I | CTCTTC | 4 cut(s) | 1948, 2345, 2508, 2646 |
| EarI | CTCTTC | 4 cut(s) | 1948, 2345, 2508, 2646 |
| Eco130I | CCWWGG | 2 cut(s) | 2508, 2829 |
| Eco24I | GRGCYC | 2 cut(s) | 2415, 2866 |
| Eco32I | GATATC | 1 cut(s) | 399 |
| Eco47I | GGWCC | 1 cut(s) | 1211 |
| Eco57I | CTGAAG | 2 cut(s) | 977, 1848 |
| Eco72I | CACGTG | 1 cut(s) | 1110 |
| Eco88I | CYCGRG | 1 cut(s) | 2007 |
| EcoRI | GAATTC | 2 cut(s) | 544, 817 |
| EcoRII | CCWGG | 3 cut(s) | 625, 1537, 1948 |
| EcoRV | GATATC | 1 cut(s) | 399 |
| EcoT14I | CCWWGG | 2 cut(s) | 2508, 2829 |
| EcoT22I | ATGCAT | 2 cut(s) | 1197, 1806 |
| EcoT38I | GRGCYC | 2 cut(s) | 2415, 2866 |
| ErhI | CCWWGG | 2 cut(s) | 2508, 2829 |
| Esp3I | CGTCTC | 1 cut(s) | 261 |
| FaqI | GGGAC | 3 cut(s) | 146, 315, 1618 |
| FauI | CCCGC | 2 cut(s) | 1550, 2460 |
| FauNDI | CATATG | 1 cut(s) | 896 |
| FbaI | TGATCA | 1 cut(s) | 58 |
| FblI | GTMKAC | 1 cut(s) | 178 |
| Fnu4HI | GCNGC | 5 cut(s) | 356, 950, 953, 1725, 2560 |
| FriOI | GRGCYC | 2 cut(s) | 2415, 2866 |
| Fsp4HI | GCNGC | 5 cut(s) | 356, 950, 953, 1725, 2560 |
| FspBI | CTAG | 6 cut(s) | 1004, 1385, 1506, 1526, 1715, 2816 |
| GlaI | GCGC | 1 cut(s) | 764 |
| GluI | GCNGC | 5 cut(s) | 356, 950, 953, 1725, 2560 |
| GsaI | CCCAGC | 2 cut(s) | 2049, 2418 |
| HaeIII | GGCC | 2 cut(s) | 355, 2034 |
| HapII | CCGG | 5 cut(s) | 44, 347, 480, 1133, 1901 |
| HgaI | GACGC | 2 cut(s) | 1429, 2353 |
| HhaI | GCGC | 1 cut(s) | 765 |
| Hin1I | GRCGYC | 1 cut(s) | 1145 |
| Hin6I | GCGC | 1 cut(s) | 763 |
| HinP1I | GCGC | 1 cut(s) | 763 |
| HincII | GTYRAC | 4 cut(s) | 208, 1143, 1882, 2091 |
| HindII | GTYRAC | 4 cut(s) | 208, 1143, 1882, 2091 |
| HinfI | GANTC | 8 cut(s) | 50, 376, 434, 593, 605, 1179, 2276, 2674 |
| HpaII | CCGG | 5 cut(s) | 44, 347, 480, 1133, 1901 |
| HphI | GGTGA | 5 cut(s) | 406, 469, 745, 1217, 2396 |
| Hpy99I | CGWCG | 1 cut(s) | 2369 |
| HpyAV | CCTTC | 7 cut(s) | 197, 1001, 1594, 1770, 1870, 2199, 2349 |
| HpyCH4III | ACNGT | 6 cut(s) | 13, 310, 469, 1249, 1522, 1788 |
| HpyCH4IV | ACGT | 2 cut(s) | 1109, 1145 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 361, 370, 760, 1810, 2568, 2861 |
| HpySE526I | ACGT | 2 cut(s) | 1109, 1145 |
| Hsp92I | GRCGYC | 1 cut(s) | 1145 |
| HspAI | GCGC | 1 cut(s) | 763 |
| Ksp22I | TGATCA | 1 cut(s) | 58 |
| LmnI | GCTCC | 4 cut(s) | 189, 1463, 2209, 2306 |
| Lsp1109I | GCAGC | 3 cut(s) | 936, 1711, 2571 |
| LweI | GCATC | 5 cut(s) | 659, 1338, 1736, 1791, 2221 |
| MaeI | CTAG | 6 cut(s) | 1004, 1385, 1506, 1526, 1715, 2816 |
| MaeII | ACGT | 2 cut(s) | 1109, 1145 |
| MaeIII | GTNAC | 5 cut(s) | 463, 803, 1146, 1205, 1634 |
| MbiI | CCGCTC | 1 cut(s) | 2309 |
| MflI | RGATCY | 3 cut(s) | 452, 1007, 2609 |
| MhlI | GDGCHC | 2 cut(s) | 2415, 2866 |
| MlyI | GAGTC | 3 cut(s) | 59, 443, 2683 |
| MmeI | TCCRAC | 1 cut(s) | 1493 |
| Mph1103I | ATGCAT | 2 cut(s) | 1197, 1806 |
| MroXI | GAANNNNTTC | 1 cut(s) | 521 |
| MseI | TTAA | 8 cut(s) | 702, 834, 885, 915, 1301, 2064, 2235, 2258 |
| MslI | CAYNNNNRTG | 3 cut(s) | 38, 66, 2135 |
| MspCI | CTTAAG | 1 cut(s) | 2234 |
| MspI | CCGG | 5 cut(s) | 44, 347, 480, 1133, 1901 |
| MspR9I | CCNGG | 6 cut(s) | 347, 481, 627, 1133, 1539, 1950 |
| Mva1269I | GAATGC | 3 cut(s) | 1620, 1804, 2785 |
| MvaI | CCWGG | 3 cut(s) | 627, 1539, 1950 |
| MvnI | CGCG | 1 cut(s) | 1557 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 361, 370, 760, 1810, 2568, 2861 |
| NciI | CCSGG | 3 cut(s) | 347, 481, 1133 |
| NcoI | CCATGG | 1 cut(s) | 2508 |
| NdeI | CATATG | 1 cut(s) | 896 |
| NlaIV | GGNNCC | 4 cut(s) | 1465, 1824, 1899, 2716 |
| NmeAIII | GCCGAG | 1 cut(s) | 453 |
| NmuCI | GTSAC | 3 cut(s) | 1146, 1205, 1634 |
| NsiI | ATGCAT | 2 cut(s) | 1197, 1806 |
| NspI | RCATGY | 3 cut(s) | 758, 1024, 1267 |
| PaeR7I | CTCGAG | 1 cut(s) | 2007 |
| PagI | TCATGA | 2 cut(s) | 1182, 2644 |
| PciI | ACATGT | 1 cut(s) | 1020 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 644 |
| PctI | GAATGC | 3 cut(s) | 1620, 1804, 2785 |
| PdmI | GAANNNNTTC | 1 cut(s) | 521 |
| PfeI | GAWTC | 5 cut(s) | 376, 593, 605, 1179, 2276 |
| PflFI | GACNNNGTC | 1 cut(s) | 2086 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 202, 217, 2773 |
| PfoI | TCCNGGA | 1 cut(s) | 1948 |
| PkrI | GCNGC | 5 cut(s) | 357, 951, 954, 1726, 2561 |
| PleI | GAGTC | 3 cut(s) | 58, 442, 2682 |
| PmaCI | CACGTG | 1 cut(s) | 1110 |
| PmlI | CACGTG | 1 cut(s) | 1110 |
| PpsI | GAGTC | 3 cut(s) | 58, 442, 2682 |
| Ppu21I | YACGTR | 1 cut(s) | 1110 |
| PscI | ACATGT | 1 cut(s) | 1020 |
| PshBI | ATTAAT | 3 cut(s) | 702, 834, 2064 |
| Psp6I | CCWGG | 3 cut(s) | 625, 1537, 1948 |
| PspCI | CACGTG | 1 cut(s) | 1110 |
| PspFI | CCCAGC | 2 cut(s) | 2045, 2414 |
| PspGI | CCWGG | 3 cut(s) | 625, 1537, 1948 |
| PspN4I | GGNNCC | 4 cut(s) | 1465, 1824, 1899, 2716 |
| PspPI | GGNCC | 2 cut(s) | 1211, 2033 |
| PstI | CTGCAG | 1 cut(s) | 1423 |
| PstNI | CAGNNNCTG | 1 cut(s) | 78 |
| PsuI | RGATCY | 3 cut(s) | 452, 1007, 2609 |
| PsyI | GACNNNGTC | 1 cut(s) | 2086 |
| RsaI | GTAC | 4 cut(s) | 902, 989, 1015, 1096 |
| RsaNI | GTAC | 4 cut(s) | 901, 988, 1014, 1095 |
| RseI | CAYNNNNRTG | 3 cut(s) | 38, 66, 2135 |
| SaqAI | TTAA | 8 cut(s) | 702, 834, 885, 915, 1301, 2064, 2235, 2258 |
| SatI | GCNGC | 5 cut(s) | 356, 950, 953, 1725, 2560 |
| Sau96I | GGNCC | 2 cut(s) | 1211, 2033 |
| SchI | GAGTC | 3 cut(s) | 59, 443, 2683 |
| ScrFI | CCNGG | 6 cut(s) | 347, 481, 627, 1133, 1539, 1950 |
| SduI | GDGCHC | 2 cut(s) | 2415, 2866 |
| SfaNI | GCATC | 5 cut(s) | 659, 1338, 1736, 1791, 2221 |
| SfcI | CTRYAG | 3 cut(s) | 79, 1324, 1419 |
| Sfr274I | CTCGAG | 1 cut(s) | 2007 |
| SinI | GGWCC | 1 cut(s) | 1211 |
| SlaI | CTCGAG | 1 cut(s) | 2007 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 38, 66, 2135 |
| SmlI | CTYRAG | 5 cut(s) | 18, 1028, 2007, 2234, 2865 |
| SmoI | CTYRAG | 5 cut(s) | 18, 1028, 2007, 2234, 2865 |
| SsiI | CCGC | 8 cut(s) | 356, 392, 952, 1557, 1773, 2309, 2467, 2671 |
| SspMI | CTAG | 6 cut(s) | 1004, 1385, 1506, 1526, 1715, 2816 |
| StyD4I | CCNGG | 6 cut(s) | 345, 479, 625, 1131, 1537, 1948 |
| StyI | CCWWGG | 2 cut(s) | 2508, 2829 |
| TaaI | ACNGT | 6 cut(s) | 13, 310, 469, 1249, 1522, 1788 |
| TaiI | ACGT | 2 cut(s) | 1112, 1148 |
| TaqI | TCGA | 3 cut(s) | 85, 494, 2008 |
| TaqII | GACCGA | 1 cut(s) | 2282 |
| TauI | GCSGC | 2 cut(s) | 358, 955 |
| TfiI | GAWTC | 5 cut(s) | 376, 593, 605, 1179, 2276 |
| Tru1I | TTAA | 8 cut(s) | 702, 834, 885, 915, 1301, 2064, 2235, 2258 |
| Tru9I | TTAA | 8 cut(s) | 702, 834, 885, 915, 1301, 2064, 2235, 2258 |
| TscAI | CASTG | 9 cut(s) | 580, 1155, 1320, 1525, 1625, 2274, 2382, 2425, 2573 |
| TseFI | GTSAC | 3 cut(s) | 1146, 1205, 1634 |
| TseI | GCWGC | 3 cut(s) | 949, 1724, 2559 |
| Tsp45I | GTSAC | 3 cut(s) | 1146, 1205, 1634 |
| TspGWI | ACGGA | 7 cut(s) | 142, 279, 285, 402, 1224, 1485, 1859 |
| TspRI | CASTG | 9 cut(s) | 580, 1155, 1320, 1525, 1625, 2274, 2382, 2425, 2573 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2086 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 202, 217, 2773 |
| Vha464I | CTTAAG | 1 cut(s) | 2234 |
| VpaK11BI | GGWCC | 1 cut(s) | 1211 |
| VspI | ATTAAT | 3 cut(s) | 702, 834, 2064 |
| XapI | RAATTY | 6 cut(s) | 198, 544, 817, 970, 1304, 1973 |
| XbaI | TCTAGA | 1 cut(s) | 1525 |
| XceI | RCATGY | 3 cut(s) | 758, 1024, 1267 |
| XhoI | CTCGAG | 1 cut(s) | 2007 |
| XmiI | GTMKAC | 1 cut(s) | 178 |
| XmnI | GAANNNNTTC | 1 cut(s) | 521 |
| XspI | CTAG | 6 cut(s) | 1004, 1385, 1506, 1526, 1715, 2816 |
| ZraI | GACGTC | 1 cut(s) | 1146 |
| Zsp2I | ATGCAT | 2 cut(s) | 1197, 1806 |