Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000814

Physical Location & Seq

Genomic Coordinates Forward (+)

24793779 .. 24798745

Gene Structure 4967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G61700.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2754 bp

ATGGTGAATCCTAGCCCAGCAAGTTTTTGGACGCAAGCCAATGCGTTACTTAGGAAGAACTTAACCTACCAGAGGAAACACATATGGACGAATGTTCGACTCATCCTGGTTCCACTCTTCCTCTGTTTAATTCTGCTGGCGATTCAACAAGTGCTTGATGCCTTGATGAAGGGTGTCTCTGATATGTCTAATTGTGGAGGCAACGTTACTTTGCCTGGTGGTATCTGTCCCATCCCAAACCCTCCATCGTTGCCTCCGATGTTGCAGATTCCACAACATGAACTCCGTTCCGTTAAGACCGATTTCTTTTCCTACAAAGATCTCCCTGACAAGTTATGCAGAGAAACAGGTTCTTGTCCCGTAACGATACTTTTCACTGGTGATAAACTGCCCCTTGGAAAAGCTTTATCCGCAAATATCTTCAGCACTTCTTTTGTGGTTAATTCCTCCGACCTCTTGCCTACTTTAGCCAATAACGTTTTGGGTTCAACAGAAGCAGCGGGGGAAGACAATTATGAAGATCCGGGGATTGCCTCAGATCTTCCTATTTACAGTATCCAACCTTCGTGCAGTGCAAACTCTACATGGCCACTCTCGCTCGGACAAATTCAGACAGCCGTGAAGTGTGTTCAAGGGTTGTGTCTCTGGAGAAATAACTCTGTAGAGGTCAATGATGAGCTTTTCAAGGGTAGTTGGAGGGGAAATCCTGCGGGGATGCCAAATGAGATCGTTGCAGCATATGATCTCATGAGCACGGATAGGAAAAATTTCAATGTGACCATATGGTATAACTCAACCTACAATGATGAGTTTGCAACTGGTCAGGCTTTAAAGCTGGTCCGAGTTCCCCGCTCTATTAATCTGATATCAAATGCTTATCTTAAGTTTCTAAAAGGCCCTGGGACAAGGATATTATTTGAGTTTCTCAAAGAAGTTCCTAAAGAAGAAACTAAAATGAATCAAGACATTGCGTCCTTGCTTGGGCCACTTTTCTTCACTTGGGTTGTTCTTCTTTTGTTCCCCGTAATCTTGACATCATTGGTGTATGAGAAACAAGAACGTCTAAGAATTATAATGAAAATGCACGGGCTAGGCGATGGTCCATATTGGATGATTTCCTATGCCTATTTTCTCACCATATCTATGTTGTATGTTATTTCTTTGGTGGGCTTCGGGTCTGCTATAGGACTCAAGTATTTCCGGCGCAATGACTACAGCATCCAGTTTGTTTTCTATTTCATCTACTCAAATCTACAAATCTCCCTCGCTTTTCTAGTCTCTTCGATATTCTCAAAGGTTAAGACTGTAACAGTCATTGCTTACATACTGGTGTACGGAACCGGGCTCTTGGGTAGCTTTCTTTTCCAAAAAATGATTGAAACTCAGTCATTCCCCGAAGAATGGATTCTTGCCATGGAGTTGTATCCCGGCTTTTCTCTATACCGCGGGTTGTATGAGTTCTCGCAATATGCATCCCGAGGAAACGGGATGAAGTGGCAAGATCTCAGTGATAGCGGAATGGGTGAAGTTTTCTGTATCATGTCAGTAGAGTGGTTTCTTGCTCTCATAGTAGCCTACTATATCGATCAGGTTTTCACATCCGGAAAGCATCCTTTCTTTTTCTTGGTGAACCTTTTCAAAAGTCCTTCTTCCCTACCAAGGAGGCCTACTGTGCAAAGGTTGGATTCTAAAAGAGTATTCATAGATATGGACAAACATGATGTCACTCAAGAGAGGGAATCAGTTCAAAAATTGAGGAATGAAGGTAGCACAGGGCATGCCATCTTGTGTGACAACTTGAAAAAGGTTTATCCAGGTAGAGATGGTAACCCGCCAAAAATGGCCGTAAGAGGGTTGTATCTCAGTGTGTCTTCAGGAGAATGCTTCGGCATGCTTGGACCTAATGGTGCCGGCAAAACTTCCTTCATCAGTATGATGACAGGACTCCTCAAACCGTCATCTGGAACAGCTTTGGTTCAGGGTTTGGACATATGCAAGGATATGAACAAAGTATACACGAGCATGGGCGTATGCCCGCAGCACGACTTGCTTTGGGAGACGCTAACAGGAAGGGAACATCTTCTCTTTTACGGTCGACTTAAAAATATCAAGGGCTCTGATCTTACACAAGCTGTTGAAGAATCTCTCAAAAGTGTCAGCCTTTACGATGGAGGAGTTGGCGACAAACCTGCTGGTAATTATAGTGGAGGTATGAAAAGGAGGCTTAGCGTGGCCATATCGCTTATCGGGAACCCCAAGGTGGTTTATTTAGATGAGCCAAGCACAGGACTTGATCCAGCCTCGAGAAAGAATTTATGGAATGTGATCAAGCGTGCAAAACAAAACACAGCAATAATTCTCACAACTCATTCCATGGAAGAAGCCGAATTTCTATGCGACAGATTAGGAATTTTTGTCGACGGAGGCTTGCAATGCATAGGAAACTCCAAGGAACTGAAGAGCAGGTACGGTGGATCATATGTCTTCACAATGACAACATCTTCAAAACATGAGGAAGAGGTAGAGAGATTGGTTGAATCTGTCTCTCCCAACGCCAAGAAGATATATCACCTTGCTGGTACTCAGAAATTTGAGCTCCCAAAGCAAGAGGTTCGAATTGCTGAGGTGTTTCGCGCTGTTGAAAAGGCCAAAGCCAACTTCACAGTCTTTGCATGGGGGCTCGCCGACACAACGCTCGAAGATGTCTTTATCAAAGTCGCTAGAACTGCTCAAGCCTTCATTTCTTTGTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006869 GO:0008150 GO:0010876 GO:0015399 GO:0015405 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0033036 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane_3 ABC_tran

Protein Analysis

917

Amino Acids

102.23

Weight (kDa)

8.62

Isoelectric Point (pI)

35.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC2_membrane_3	PF12698	255 - 527	4.7e-12	ABC-2 family transporter protein
ABC_tran	PF00005	618 - 761	9.7e-25	ABC transporter
AAA_21	PF13304	710 - 789	7.7e-07	AAA domain, putative AbiEii toxin, Type IV TA system

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47740 AT3G47750 AT3G47760 AT3G47760 AT3G47760 AT3G47770 AT3G47770 AT3G47770 AT3G47780 AT3G47790 AT3G47790 AT3G47790 AT5G61700 AT5G61700 AT5G61700 AT5G61700 AT5G61740 AT5G61740 AT5G61740
fragaria_vesca	FvH4_5g15270 FvH4_5g15270 FvH4_5g15270 FvH4_5g15270 FvH4_5g17020
malus_domestica	MD00G1160300.v1.1 MD06G1189700.v1.1 MD14G1196600.v1.1
prunus_persica	Prupe.5G188500_v2.0.a1 Prupe.5G188500_v2.0.a1 Prupe.5G188700_v2.0.a1 Prupe.5G229600_v2.0.a1 Prupe.5G229600_v2.0.a1
pyrus_communis	pycom06g16850 pycom14g16330
rosa_chinensis	RchiOBHm_Chr7g0178831 RchiOBHm_Chr7g0180791 RchiOBHm_Chr7g0180811
rosa_laevigata	RLG00000005228 RLG00000005229 RLG00000005411
rosa_multiflora	Rmu_sc0007457.1_g000007 Rmu_sc0007457.1_g000009 Rmu_sc0025325.1_g000002 Rmu_sc0025325.1_g000004
rosa_roxburghii	Rroxscaffold_3G00272510 Rroxscaffold_3G00272520 Rroxscaffold_3G00274540
rosa_rugosa	Rorug01G0115100 Rorug06G0420100 Rorug06G0420100 Rorug06G0436000 Rorug06G0436100 Rorug06G0436200 Rorug06G0436300
rosa_samantha	Rh1BG107000 Rh7AG019400 Rh7AG037800 Rh7AG038000 Rh7BG018900 Rh7BG037600 Rh7BG037800 Rh7CG019500 Rh7CG039200 Rh7CG039300 Rh7DG019300
rosa_wichuraiana	Rw7G001580 Rw7G003120 Rw7G003130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1073
Acc36I	ACCTGC	2 cut(s)	2197, 2454
AccB1I	GGYRCC	1 cut(s)	1907
AccBSI	CCGCTC	1 cut(s)	852
AccI	GTMKAC	3 cut(s)	2013, 2095, 2418
AccII	CGCG	2 cut(s)	1446, 2634
AccIII	TCCGGA	1 cut(s)	1601
AciI	CCGC	9 cut(s)	411, 500, 710, 850, 1444, 1446, 1515, 1832, 2036
AclI	AACGTT	2 cut(s)	204, 477
AclWI	GGATC	3 cut(s)	515, 2288, 2482
AcoI	YGGCCR	3 cut(s)	587, 1842, 2232
AcsI	RAATTY	6 cut(s)	606, 766, 2311, 2387, 2409, 2588
AcuI	CTGAAG	3 cut(s)	406, 1857, 2477
AfaI	GTAC	3 cut(s)	1334, 2468, 2581
AfiI	CCNNNNNNNGG	8 cut(s)	72, 981, 1401, 1659, 1851, 1961, 2260, 2285
AflII	CTTAAG	1 cut(s)	881
AhdI	GACNNNNNGTC	1 cut(s)	970
AjnI	CCWGG	4 cut(s)	105, 214, 898, 1813
AjuI	GAANNNNNNNTTGG	2 cut(s)	2642, 2674
AluBI	AGCT	7 cut(s)	404, 679, 835, 1356, 1970, 2132, 2596
AluI	AGCT	7 cut(s)	404, 679, 835, 1356, 1970, 2132, 2596
Alw21I	GWGCWC	2 cut(s)	755, 2598
Alw26I	GTCTC	5 cut(s)	181, 647, 1282, 2051, 2548
AlwI	GGATC	3 cut(s)	515, 2288, 2482
Ama87I	CYCGRG	2 cut(s)	1476, 2302
Aor13HI	TCCGGA	1 cut(s)	1601
AoxI	GGCC	7 cut(s)	587, 895, 983, 1664, 1842, 2232, 2646
ApeKI	GCWGC	3 cut(s)	497, 734, 2038
ApoI	RAATTY	6 cut(s)	606, 766, 2311, 2387, 2409, 2588
ArsI	GACNNNNNNTTYG	2 cut(s)	1707, 1739
AseI	ATTAAT	1 cut(s)	858
Asp700I	GAANNNNTTC	5 cut(s)	767, 1404, 1634, 1743, 2079
AspLEI	GCGC	2 cut(s)	1206, 2636
AspS9I	GGNCC	5 cut(s)	838, 896, 983, 1100, 1898
AsuC2I	CCSGG	3 cut(s)	525, 1342, 1428
AsuHPI	GGTGA	6 cut(s)	16, 392, 1126, 1535, 1639, 2561
AsuII	TTCGAA	1 cut(s)	2614
AvaI	CYCGRG	2 cut(s)	1476, 2302
AvaII	GGWCC	3 cut(s)	838, 1100, 1898
BalI	TGGCCA	2 cut(s)	589, 2234
BanI	GGYRCC	1 cut(s)	1907
BanII	GRGCYC	4 cut(s)	1347, 2117, 2598, 2682
BarI	GAAGNNNNNNTAC	4 cut(s)	547, 579, 2450, 2482
BauI	CACGAG	1 cut(s)	2017
BbsI	GAAGAC	3 cut(s)	513, 1863, 2476
Bbv12I	GWGCWC	2 cut(s)	755, 2598
BbvCI	CCTCAGC	1 cut(s)	2622
BbvI	GCAGC	3 cut(s)	509, 746, 2050
BccI	CCATC	6 cut(s)	239, 253, 1091, 1790, 1817, 2162
BceAI	ACGGC	2 cut(s)	602, 1829
BcgI	CGANNNNNNTGC	4 cut(s)	2171, 2205, 2594, 2628
BciT130I	CCWGG	4 cut(s)	107, 216, 900, 1815
BciVI	GTATCC	2 cut(s)	566, 1434
BclI	TGATCA	1 cut(s)	2325
BcnI	CCSGG	3 cut(s)	525, 1342, 1428
BcoDI	GTCTC	5 cut(s)	181, 647, 1282, 2051, 2548
BfaI	CTAG	4 cut(s)	12, 1091, 1274, 2721
BfmI	CTRYAG	3 cut(s)	660, 1182, 1213
BfrI	CTTAAG	1 cut(s)	881
BfuAI	ACCTGC	2 cut(s)	2197, 2454
BfuI	GTATCC	2 cut(s)	566, 1434
BglII	AGATCT	3 cut(s)	319, 538, 1501
BisI	GCNGC	3 cut(s)	498, 735, 2039
BlpI	GCTNAGC	1 cut(s)	2225
BlsI	GCNGC	3 cut(s)	499, 736, 2040
Bme1390I	CCNGG	7 cut(s)	107, 216, 525, 900, 1342, 1428, 1815
Bme18I	GGWCC	3 cut(s)	838, 1100, 1898
BmeRI	GACNNNNNGTC	1 cut(s)	970
BmeT110I	CYCGRG	2 cut(s)	1476, 2302
BmgT120I	GGNCC	5 cut(s)	838, 896, 983, 1100, 1898
BmiI	GGNNCC	4 cut(s)	111, 1339, 1909, 2252
BmrFI	CCNGG	7 cut(s)	107, 216, 525, 900, 1342, 1428, 1815
BmsI	GCATC	5 cut(s)	148, 705, 1227, 1481, 1618
BpiI	GAAGAC	3 cut(s)	513, 1863, 2476
BpmI	CTGGAG	1 cut(s)	667
Bpu10I	CCTNAGC	1 cut(s)	2622
Bpu1102I	GCTNAGC	1 cut(s)	2225
Bpu14I	TTCGAA	1 cut(s)	2614
BpuEI	CTTGAG	3 cut(s)	1175, 1713, 2715
BpuMI	CCSGG	3 cut(s)	525, 1342, 1428
Bsa29I	ATCGAT	1 cut(s)	1584
BsaWI	WCCGGW	1 cut(s)	1601
BsaXI	ACNNNNNCTCC	4 cut(s)	189, 219, 267, 297
Bsc4I	CCNNNNNNNGG	8 cut(s)	72, 981, 1401, 1659, 1851, 1961, 2260, 2285
Bse118I	RCCGGY	1 cut(s)	1910
Bse1I	ACTGG	4 cut(s)	382, 823, 1222, 1332
Bse3DI	GCAATG	4 cut(s)	966, 1213, 1314, 2438
BseAI	TCCGGA	1 cut(s)	1601
BseBI	CCWGG	4 cut(s)	107, 216, 900, 1815
BseCI	ATCGAT	1 cut(s)	1584
BseGI	GGATG	9 cut(s)	102, 231, 720, 1116, 1218, 1472, 1494, 1598, 1609
BseLI	CCNNNNNNNGG	8 cut(s)	72, 981, 1401, 1659, 1851, 1961, 2260, 2285
BseMI	GCAATG	4 cut(s)	966, 1213, 1314, 2438
BseMII	CTCAG	6 cut(s)	549, 1397, 1519, 1876, 2597, 2613
BseNI	ACTGG	4 cut(s)	382, 823, 1222, 1332
BseRI	GAGGAG	2 cut(s)	1937, 2187
BseXI	GCAGC	3 cut(s)	509, 746, 2050
BseYI	CCCAGC	1 cut(s)	16
BsgI	GTGCAG	1 cut(s)	589
Bsh1236I	CGCG	2 cut(s)	1446, 2634
Bsh1285I	CGRYCG	1 cut(s)	2095
BshFI	GGCC	7 cut(s)	589, 897, 985, 1666, 1844, 2234, 2648
BshNI	GGYRCC	1 cut(s)	1907
BshVI	ATCGAT	1 cut(s)	1584
BsiEI	CGRYCG	1 cut(s)	2095
BsiHKAI	GWGCWC	2 cut(s)	755, 2598
BsiHKCI	CYCGRG	2 cut(s)	1476, 2302
BsiSI	CCGG	6 cut(s)	524, 1201, 1341, 1428, 1602, 1911
BslFI	GGGAC	3 cut(s)	213, 342, 916
BslI	CCNNNNNNNGG	8 cut(s)	72, 981, 1401, 1659, 1851, 1961, 2260, 2285
BsmAI	GTCTC	5 cut(s)	181, 647, 1282, 2051, 2548
BsmBI	CGTCTC	1 cut(s)	2051
BsmFI	GGGAC	3 cut(s)	213, 342, 916
BsmI	GAATGC	1 cut(s)	1886
BsnI	GGCC	7 cut(s)	589, 897, 985, 1666, 1844, 2234, 2648
BsoBI	CYCGRG	2 cut(s)	1476, 2302
Bsp119I	TTCGAA	1 cut(s)	2614
Bsp1286I	GDGCHC	5 cut(s)	755, 1347, 2117, 2598, 2682
Bsp13I	TCCGGA	1 cut(s)	1601
Bsp1720I	GCTNAGC	1 cut(s)	2225
Bsp19I	CCATGG	2 cut(s)	1413, 2373
BspACI	CCGC	9 cut(s)	411, 500, 710, 850, 1444, 1446, 1515, 1832, 2036
BspANI	GGCC	7 cut(s)	589, 897, 985, 1666, 1844, 2234, 2648
BspCNI	CTCAG	6 cut(s)	548, 1396, 1518, 1875, 2596, 2614
BspDI	ATCGAT	1 cut(s)	1584
BspEI	TCCGGA	1 cut(s)	1601
BspFNI	CGCG	2 cut(s)	1446, 2634
BspHI	TCATGA	1 cut(s)	747
BspLI	GGNNCC	4 cut(s)	111, 1339, 1909, 2252
BspMI	ACCTGC	2 cut(s)	2197, 2454
BspPI	GGATC	3 cut(s)	515, 2288, 2482
BspQI	GCTCTTC	1 cut(s)	2453
BspT104I	TTCGAA	1 cut(s)	2614
BspT107I	GGYRCC	1 cut(s)	1907
BspTI	CTTAAG	1 cut(s)	881
BsrBI	CCGCTC	1 cut(s)	852
BsrDI	GCAATG	4 cut(s)	966, 1213, 1314, 2438
BsrFI	RCCGGY	1 cut(s)	1910
BsrI	ACTGG	4 cut(s)	382, 823, 1222, 1332
BssAI	RCCGGY	1 cut(s)	1910
BssNAI	GTATAC	1 cut(s)	2014
BssSI	CACGAG	1 cut(s)	2017
BssT1I	CCWWGG	6 cut(s)	394, 1413, 1658, 2256, 2373, 2448
Bst1107I	GTATAC	1 cut(s)	2014
Bst2BI	CACGAG	1 cut(s)	2017
Bst2UI	CCWGG	4 cut(s)	107, 216, 900, 1815
Bst4CI	ACNGT	8 cut(s)	554, 1306, 1312, 1672, 1956, 2093, 2471, 2665
Bst6I	CTCTTC	4 cut(s)	122, 1285, 2453, 2511
BstAFI	CTTAAG	1 cut(s)	881
BstAPI	GCANNNNNTGC	1 cut(s)	2047
BstBI	TTCGAA	1 cut(s)	2614
BstC8I	GCNNGC	9 cut(s)	36, 138, 1779, 1892, 1912, 2036, 2334, 2429, 2682
BstDEI	CTNAG	9 cut(s)	50, 535, 1064, 1383, 1505, 1862, 2225, 2583, 2622
BstDSI	CCRYGG	3 cut(s)	1413, 1444, 2373
BstEII	GGTNACC	1 cut(s)	1826
BstENI	CCTNNNNNAGG	1 cut(s)	70
BstF5I	GGATG	9 cut(s)	102, 231, 720, 1116, 1218, 1472, 1494, 1598, 1609
BstFNI	CGCG	2 cut(s)	1446, 2634
BstHHI	GCGC	2 cut(s)	1206, 2636
BstMAI	GTCTC	5 cut(s)	181, 647, 1282, 2051, 2548
BstMCI	CGRYCG	1 cut(s)	2095
BstMWI	GCNNNNNNNGC	7 cut(s)	410, 595, 1672, 2047, 2433, 2602, 2726
BstNI	CCWGG	4 cut(s)	107, 216, 900, 1815
BstNSI	RCATGY	2 cut(s)	1781, 1894
BstPI	GGTNACC	1 cut(s)	1826
BstSCI	CCNGG	7 cut(s)	105, 214, 523, 898, 1340, 1426, 1813
BstSFI	CTRYAG	3 cut(s)	660, 1182, 1213
BstUI	CGCG	2 cut(s)	1446, 2634
BstV1I	GCAGC	3 cut(s)	509, 746, 2050
BstV2I	GAAGAC	3 cut(s)	513, 1863, 2476
BstX2I	RGATCY	4 cut(s)	319, 520, 538, 1501
BstYI	RGATCY	4 cut(s)	319, 520, 538, 1501
BstZ17I	GTATAC	1 cut(s)	2014
Bsu15I	ATCGAT	1 cut(s)	1584
BsuI	GTATCC	2 cut(s)	566, 1434
BsuRI	GGCC	7 cut(s)	589, 897, 985, 1666, 1844, 2234, 2648
BsuTUI	ATCGAT	1 cut(s)	1584
BtgI	CCRYGG	3 cut(s)	1413, 1444, 2373
BtgZI	GCGATG	1 cut(s)	1110
BtsCI	GGATG	9 cut(s)	102, 231, 720, 1116, 1218, 1472, 1494, 1598, 1609
BtsI	GCAGTG	1 cut(s)	577
BtsIMutI	CAGTG	4 cut(s)	375, 577, 1513, 1870
BveI	ACCTGC	2 cut(s)	2197, 2454
Cac8I	GCNNGC	9 cut(s)	36, 138, 1779, 1892, 1912, 2036, 2334, 2429, 2682
CciI	TCATGA	1 cut(s)	747
CfoI	GCGC	2 cut(s)	1206, 2636
Cfr10I	RCCGGY	1 cut(s)	1910
Cfr13I	GGNCC	5 cut(s)	838, 896, 983, 1100, 1898
Cfr42I	CCGCGG	1 cut(s)	1447
ClaI	ATCGAT	1 cut(s)	1584
CseI	GACGC	3 cut(s)	40, 960, 2068
Csp6I	GTAC	3 cut(s)	1333, 2467, 2580
CviQI	GTAC	3 cut(s)	1333, 2467, 2580
DdeI	CTNAG	9 cut(s)	50, 535, 1064, 1383, 1505, 1862, 2225, 2583, 2622
DraI	TTTAAA	1 cut(s)	831
DriI	GACNNNNNGTC	1 cut(s)	970
EaeI	YGGCCR	3 cut(s)	587, 1842, 2232
Eam1104I	CTCTTC	4 cut(s)	122, 1285, 2453, 2511
Eam1105I	GACNNNNNGTC	1 cut(s)	970
EarI	CTCTTC	4 cut(s)	122, 1285, 2453, 2511
Ecl136II	GAGCTC	1 cut(s)	2596
Eco130I	CCWWGG	6 cut(s)	394, 1413, 1658, 2256, 2373, 2448
Eco147I	AGGCCT	1 cut(s)	1666
Eco24I	GRGCYC	4 cut(s)	1347, 2117, 2598, 2682
Eco32I	GATATC	1 cut(s)	867
Eco47I	GGWCC	3 cut(s)	838, 1100, 1898
Eco53kI	GAGCTC	1 cut(s)	2596
Eco57I	CTGAAG	3 cut(s)	406, 1857, 2477
Eco88I	CYCGRG	2 cut(s)	1476, 2302
Eco91I	GGTNACC	1 cut(s)	1826
EcoICRI	GAGCTC	1 cut(s)	2596
EcoNI	CCTNNNNNAGG	1 cut(s)	70
EcoO109I	RGGNCCY	1 cut(s)	896
EcoO65I	GGTNACC	1 cut(s)	1826
EcoRII	CCWGG	4 cut(s)	105, 214, 898, 1813
EcoRV	GATATC	1 cut(s)	867
EcoT14I	CCWWGG	6 cut(s)	394, 1413, 1658, 2256, 2373, 2448
EcoT22I	ATGCAT	2 cut(s)	1474, 2438
EcoT38I	GRGCYC	4 cut(s)	1347, 2117, 2598, 2682
ErhI	CCWWGG	6 cut(s)	394, 1413, 1658, 2256, 2373, 2448
Esp3I	CGTCTC	1 cut(s)	2051
FalI	AAGNNNNNCTT	2 cut(s)	1633, 1665
FaqI	GGGAC	3 cut(s)	213, 342, 916
FauI	CCCGC	6 cut(s)	493, 703, 857, 1439, 1839, 2043
FauNDI	CATATG	5 cut(s)	83, 739, 782, 1991, 2479
FbaI	TGATCA	1 cut(s)	2325
FblI	GTMKAC	3 cut(s)	2013, 2095, 2418
Fnu4HI	GCNGC	3 cut(s)	498, 735, 2039
FokI	GGATG	9 cut(s)	89, 218, 727, 1123, 1205, 1459, 1501, 1585, 1596
FriOI	GRGCYC	4 cut(s)	1347, 2117, 2598, 2682
Fsp4HI	GCNGC	3 cut(s)	498, 735, 2039
FspBI	CTAG	4 cut(s)	12, 1091, 1274, 2721
GlaI	GCGC	2 cut(s)	1205, 2635
GluI	GCNGC	3 cut(s)	498, 735, 2039
GsaI	CCCAGC	1 cut(s)	20
GsuI	CTGGAG	1 cut(s)	667
HaeIII	GGCC	7 cut(s)	589, 897, 985, 1666, 1844, 2234, 2648
HapII	CCGG	6 cut(s)	524, 1201, 1341, 1428, 1602, 1911
HgaI	GACGC	3 cut(s)	40, 960, 2068
HhaI	GCGC	2 cut(s)	1206, 2636
Hin6I	GCGC	2 cut(s)	1204, 2634
HinP1I	GCGC	2 cut(s)	1204, 2634
HincII	GTYRAC	2 cut(s)	2096, 2419
HindII	GTYRAC	2 cut(s)	2096, 2419
HindIII	AAGCTT	1 cut(s)	402
HpaII	CCGG	6 cut(s)	524, 1201, 1341, 1428, 1602, 1911
HphI	GGTGA	6 cut(s)	16, 392, 1126, 1535, 1639, 2561
Hpy166II	GTNNAC	5 cut(s)	1333, 1630, 2014, 2096, 2419
Hpy8I	GTNNAC	5 cut(s)	1333, 1630, 2014, 2096, 2419
Hpy99I	CGWCG	1 cut(s)	2423
HpyAV	CCTTC	7 cut(s)	163, 573, 1656, 1757, 1933, 2064, 2746
HpyCH4III	ACNGT	8 cut(s)	554, 1306, 1312, 1672, 1956, 2093, 2471, 2665
HpyCH4IV	ACGT	3 cut(s)	204, 477, 1060
HpyF10VI	GCNNNNNNNGC	7 cut(s)	410, 595, 1672, 2047, 2433, 2602, 2726
HpyF3I	CTNAG	9 cut(s)	50, 535, 1064, 1383, 1505, 1862, 2225, 2583, 2622
HpySE526I	ACGT	3 cut(s)	204, 477, 1060
HspAI	GCGC	2 cut(s)	1204, 2634
Kpn2I	TCCGGA	1 cut(s)	1601
KroI	GCCGGC	1 cut(s)	1910
KroNI	GCCGGC	1 cut(s)	1912
Ksp22I	TGATCA	1 cut(s)	2325
KspI	CCGCGG	1 cut(s)	1447
LguI	GCTCTTC	1 cut(s)	2453
LmnI	GCTCC	1 cut(s)	2601
Lsp1109I	GCAGC	3 cut(s)	509, 746, 2050
LweI	GCATC	5 cut(s)	148, 705, 1227, 1481, 1618
MaeI	CTAG	4 cut(s)	12, 1091, 1274, 2721
MaeII	ACGT	3 cut(s)	204, 477, 1060
MaeIII	GTNAC	8 cut(s)	45, 205, 361, 775, 1306, 1723, 1790, 1826
MbiI	CCGCTC	1 cut(s)	852
MflI	RGATCY	4 cut(s)	319, 520, 538, 1501
MhlI	GDGCHC	5 cut(s)	755, 1347, 2117, 2598, 2682
MlsI	TGGCCA	2 cut(s)	589, 2234
MluNI	TGGCCA	2 cut(s)	589, 2234
MlyI	GAGTC	3 cut(s)	93, 1182, 1938
MmeI	TCCRAC	4 cut(s)	474, 583, 674, 1662
Mox20I	TGGCCA	2 cut(s)	589, 2234
Mph1103I	ATGCAT	2 cut(s)	1474, 2438
MroI	TCCGGA	1 cut(s)	1601
MroNI	GCCGGC	1 cut(s)	1910
MroXI	GAANNNNTTC	5 cut(s)	767, 1404, 1634, 1743, 2079
MscI	TGGCCA	2 cut(s)	589, 2234
MslI	CAYNNNNRTG	5 cut(s)	1142, 1328, 1706, 1931, 2021
Msp20I	TGGCCA	2 cut(s)	589, 2234
MspA1I	CMGCKG	2 cut(s)	500, 1446
MspCI	CTTAAG	1 cut(s)	881
MspI	CCGG	6 cut(s)	524, 1201, 1341, 1428, 1602, 1911
MspR9I	CCNGG	7 cut(s)	107, 216, 525, 900, 1342, 1428, 1815
Mva1269I	GAATGC	1 cut(s)	1886
MvaI	CCWGG	4 cut(s)	107, 216, 900, 1815
MvnI	CGCG	2 cut(s)	1446, 2634
MwoI	GCNNNNNNNGC	7 cut(s)	410, 595, 1672, 2047, 2433, 2602, 2726
NaeI	GCCGGC	1 cut(s)	1912
NciI	CCSGG	3 cut(s)	525, 1342, 1428
NcoI	CCATGG	2 cut(s)	1413, 2373
NdeI	CATATG	5 cut(s)	83, 739, 782, 1991, 2479
NgoMIV	GCCGGC	1 cut(s)	1910
NlaIV	GGNNCC	4 cut(s)	111, 1339, 1909, 2252
NmuCI	GTSAC	3 cut(s)	775, 1723, 1790
NsiI	ATGCAT	2 cut(s)	1474, 2438
NspI	RCATGY	2 cut(s)	1781, 1894
NspV	TTCGAA	1 cut(s)	2614
PaeI	GCATGC	2 cut(s)	1781, 1894
PaeR7I	CTCGAG	1 cut(s)	2302
PagI	TCATGA	1 cut(s)	747
PasI	CCCWGGG	1 cut(s)	899
PceI	AGGCCT	1 cut(s)	1666
PciSI	GCTCTTC	1 cut(s)	2453
PcsI	WCGNNNNNNNCGW	2 cut(s)	254, 1092
PctI	GAATGC	1 cut(s)	1886
PdiI	GCCGGC	1 cut(s)	1912
PdmI	GAANNNNTTC	5 cut(s)	767, 1404, 1634, 1743, 2079
PfeI	GAWTC	9 cut(s)	7, 142, 268, 958, 1405, 1685, 1739, 2141, 2537
PkrI	GCNGC	3 cut(s)	499, 736, 2040
PleI	GAGTC	3 cut(s)	93, 1182, 1938
PpsI	GAGTC	3 cut(s)	93, 1182, 1938
PshBI	ATTAAT	1 cut(s)	858
PsiI	TTATAA	1 cut(s)	1073
Psp124BI	GAGCTC	1 cut(s)	2598
Psp1406I	AACGTT	2 cut(s)	204, 477
Psp6I	CCWGG	4 cut(s)	105, 214, 898, 1813
PspEI	GGTNACC	1 cut(s)	1826
PspFI	CCCAGC	1 cut(s)	16
PspGI	CCWGG	4 cut(s)	105, 214, 898, 1813
PspN4I	GGNNCC	4 cut(s)	111, 1339, 1909, 2252
PspPI	GGNCC	5 cut(s)	838, 896, 983, 1100, 1898
PsrI	GAACNNNNNNTAC	4 cut(s)	50, 82, 1997, 2029
PsuI	RGATCY	4 cut(s)	319, 520, 538, 1501
RsaI	GTAC	3 cut(s)	1334, 2468, 2581
RsaNI	GTAC	3 cut(s)	1333, 2467, 2580
RseI	CAYNNNNRTG	5 cut(s)	1142, 1328, 1706, 1931, 2021
SacI	GAGCTC	1 cut(s)	2598
SacII	CCGCGG	1 cut(s)	1447
SalI	GTCGAC	2 cut(s)	2094, 2417
SapI	GCTCTTC	1 cut(s)	2453
SatI	GCNGC	3 cut(s)	498, 735, 2039
Sau96I	GGNCC	5 cut(s)	838, 896, 983, 1100, 1898
SchI	GAGTC	3 cut(s)	93, 1182, 1938
ScrFI	CCNGG	7 cut(s)	107, 216, 525, 900, 1342, 1428, 1815
SduI	GDGCHC	5 cut(s)	755, 1347, 2117, 2598, 2682
SfaNI	GCATC	5 cut(s)	148, 705, 1227, 1481, 1618
SfcI	CTRYAG	3 cut(s)	660, 1182, 1213
Sfr274I	CTCGAG	1 cut(s)	2302
Sfr303I	CCGCGG	1 cut(s)	1447
SfuI	TTCGAA	1 cut(s)	2614
SgrBI	CCGCGG	1 cut(s)	1447
SinI	GGWCC	3 cut(s)	838, 1100, 1898
SlaI	CTCGAG	1 cut(s)	2302
SmiMI	CAYNNNNRTG	5 cut(s)	1142, 1328, 1706, 1931, 2021
SmlI	CTYRAG	5 cut(s)	881, 1190, 1728, 2302, 2730
SmoI	CTYRAG	5 cut(s)	881, 1190, 1728, 2302, 2730
SphI	GCATGC	2 cut(s)	1781, 1894
SseBI	AGGCCT	1 cut(s)	1666
SsiI	CCGC	9 cut(s)	411, 500, 710, 850, 1444, 1446, 1515, 1832, 2036
SspMI	CTAG	4 cut(s)	12, 1091, 1274, 2721
SstI	GAGCTC	1 cut(s)	2598
StuI	AGGCCT	1 cut(s)	1666
StyD4I	CCNGG	7 cut(s)	105, 214, 523, 898, 1340, 1426, 1813
StyI	CCWWGG	6 cut(s)	394, 1413, 1658, 2256, 2373, 2448
TaaI	ACNGT	8 cut(s)	554, 1306, 1312, 1672, 1956, 2093, 2471, 2665
TaiI	ACGT	3 cut(s)	207, 480, 1063
TaqI	TCGA	8 cut(s)	97, 1283, 1584, 2095, 2303, 2418, 2614, 2697
TaqII	GACCGA	1 cut(s)	314
TfiI	GAWTC	9 cut(s)	7, 142, 268, 958, 1405, 1685, 1739, 2141, 2537
TscAI	CASTG	4 cut(s)	382, 577, 1513, 1870
TseFI	GTSAC	3 cut(s)	775, 1723, 1790
TseI	GCWGC	3 cut(s)	497, 734, 2038
Tsp45I	GTSAC	3 cut(s)	775, 1723, 1790
TspGWI	ACGGA	5 cut(s)	275, 280, 770, 1350, 2436
TspRI	CASTG	4 cut(s)	382, 577, 1513, 1870
Vha464I	CTTAAG	1 cut(s)	881
VpaK11BI	GGWCC	3 cut(s)	838, 1100, 1898
VspI	ATTAAT	1 cut(s)	858
XagI	CCTNNNNNAGG	1 cut(s)	70
XapI	RAATTY	6 cut(s)	606, 766, 2311, 2387, 2409, 2588
XceI	RCATGY	2 cut(s)	1781, 1894
XcmI	CCANNNNNNNNNTGG	2 cut(s)	24, 478
XhoI	CTCGAG	1 cut(s)	2302
XmiI	GTMKAC	3 cut(s)	2013, 2095, 2418
XmnI	GAANNNNTTC	5 cut(s)	767, 1404, 1634, 1743, 2079
XspI	CTAG	4 cut(s)	12, 1091, 1274, 2721
Zsp2I	ATGCAT	2 cut(s)	1474, 2438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.