AT3G48470

Telomere length regulation protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
17951626 .. 17956920
5295 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G48470.1

Sequence Viewer

Length: 3084 bp
ATGGCGGAAGGGACTAAGCAAGAGAGAACGCTTGAAAACAATTTGCTCCACAAGGTCGGAGAAGCCGTCTCTGCTATTTCTGATGCAAAGCATGTCGACCAAGTGATCTCCGCTATTCATTCCGTCGCCGTTCTTCTCTTCCCGGTCGATCCATCGTTGTTTTCCGGGAGTATTGGGGACAAGTACAGAGAAAGGGTCTGTAGCTCTGTAGTTCCTTCTGCAGATGAGAGAAATGAATGGTTGGAGACGTTCTATCGAGGTGTTGCGTTTCCAACGTTTGCTCGAGTTTTGTTGCTTGATGTTGCTTCGGATTGGCTGTCTTGTTTCCCTATTTCAGTGCAGAAACATTTGTATGATAAGTTCTTCTTAGATGGATCTGTTATTGAGGTTGTTCAAGTCTTGGTTCCATTTCTACATCATGTGGGAGATGGTGGCGTTAATGCTAATTCTGTCCAGACTAATGTGGAAAGATTGCTTATATTGTGTTTGCTTGAAAATGATGGAGTGCTCAAGATAACTAAAGAAATTGGTAATATTTATCAAGGACATAATTCTAGCAATGGAAGTCTCAAGCCTTTATTATCCAGGCTATCACAGATCTTGACCTCCATTCCTGATAAAGCACGGTTGAAATCGCCACCTTTACTTTCTTCTAACTTGTACTTCAAGCACATTACCAATCAGCTTCTACAAATATTGGACGACAGGGCTTCCTGCACTGAGGCCAATTGCACAGTTATCGTTTTATCATTTGTCGGGGAAGTTTTTTCCCGCATCTGTCGACGTGGATTATCAGATTTGCTGTTAAGTGAAGTAACACCTCATGTCCTAGCTCAAGTTAGGAGGTTACTAAACTCAAAGATAGGTGCTATTGAGGTGGATACATTTCAGTTGGACCCTACAACCCGGATTTGGTCGAAAACTATGGAAGCAGTGACAGATCCGTATGCTGTTGAGAAAATGGCTGAACAACTTTTACATCAGCTATATGCTGAGCATCCAAGTGATGTTGAAGCTTTCTGGACTATTTGGACTTTGTTTCATCGCAATGTAATACATCAGGCATCAGTGAGGCAAGCAAAATGTTTTCTATGGCAGCTTGATTCTTTCTTTAGATACCCCTTTTTCTTCTTTCATTTCCATCCTAATGCTGTGAAACAATGCGTTCTTGAGTGCCCACCGGTTACTAATACACTTGCTAAAGGTGATGTCACACAAGGACTTCTTGAAACAACGCAGCGACTAGCCTCAGTTTGGTCAAAACGGGAGTTTCTGCAGTCCGTCCAATTGGAGCAGCAAGCTTACCTTCAGTTCCTGTTTCCCGTAACAGATATATCAGATATAACTGCAGCTCTTGGGCTTTGCCTGGAGAACATGTCAAGAGAAGAACTAGATAGAACAAAGGATGTAATGCACAGTATTCTTCAAGGAGTTAGCTGTAGACTGGAGAACCCAGGAGATCTGGTACGGAAAATGGCTAGCTCTATCGCCTTTATGTTCTCTAAAGTAATTGACCCGAAGAATCCTCTGTACCTTGATGATTCAATCACTGATAATGCAATTGACTGGGAATTTGGATTGCAAACGGCATCAATCACAAATACAATGGAAAATGGAGATGGTGAAAACAAAAGATCAGCCTCCTTAACTGAAGTAAATGAGTCTAGTCGCAGAAACAAGCAAAAGGAAAATCGCAAGAGTAAGAACATATCTGCTTTTGTATTGGCTGATCCCAATGAAATAGTTGATTTGGCTACGTTAAACTGTGATACGGAGAGTGATAAAGATGATGGCGATGATGACGCAAGTGTCAGCTCTGATAATTCAAGTGTCACTTCTTTGGAGCCATATGATCTTATGGATGATGATAAGGATTTAGGGAAACAATTTACACATTTGGTGGATGTTGTTGGAGCTCTTAGGAAAACCGATGATGCTGATGGGGTGGAGAAAGCTATATATGTTGCAGAGAAACTTGTGCGAGCATCACCTGATGAATTGACTCATATAGCTGGTGACCTTGCTCGAACTCTGGTACAGGTTCGCTGCTCTGATATAGCAATCGAAGGTGAAGAAGATTCAGCTGAAGAAAAGCGGCAAAGAGCTCTAATTGCGTTGCTCGTGACCCGTCCATTTGAATCCCTTGAAACTCTAAACAATATTTTGTATTCGCCTAATGTAGATGTAAGTCAGCGCATAATGATACTTGATGTCATGGCTGAAGCAGCTAGGGAGCTTGCTAATTCCAAGACCCTGAAACCTAAACACGAAGCACGGGGACCTCTGATATCAAATATATCAGATCCTCAACCCTGGTATTTGCCTAGCAATGCGAGTACCCCATGGAAAAAGGTGTCTGAGACAGGATCTTTTCATCTGAACTGGGCAAATCGATTTGAGAGAGAGCTACAGTCAAAGCCTGGACAGACAAAGAAAGGAAAATCTCGAAGGTGGAGCCTCAAATCAGCAGACAGAGATCAAAACAGTACTGACTGGTCTCAGAATAGATTTCCACTATATGCAGCAGCATTTATGCTTCCAGCCATGAAAGAGTTTGACAAGAAACGACATGGTGTTGACTTACTTGGCAGGGACTTTGTTGTCCTTGGGAAACTTGTTCACATGCTCGGCGTCTGTATGCAATGTGCATCAATGCATCCAGAAGCATCTGCATTAGCTATCTCTCTTCTAGATATGTTACAACGAAGGGAAGTATGCAATCACCCAGAGGCCTATGTCCGAAGAGCGGTCCTTTTTGCAGCCTCTTCTGTTTTGGTTTCTCTTCACCCGTCTTACATAGTGTCAACCTTGGTTGAAGGAAATCTTGATCTTTCCAGAGCTCTTGAATGGATCAGAACGTGGGCTCTTCAAATAGCTGACTCAGACATCGACCGAGACTGTTACACGATGGCTTTGTCATGTCTCCAACTCCATGCCGAGATGGCTCTTCAAACTTCCCGAGCTTTAGAATCAACTGGTGGAAGTAGCAGCAGCAGTAGCATTAGACCGATGAACATAAGTCTACCTTCGGGTATCTCTAAACTGACATCAATCAAACTTCCTTCTTCAAATGTTCATCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1027

Amino Acids

114.7

Weight (kDa)

5.6

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TELO2_ARM PF25320 266 - 523 5.1e-84 TELO2 ARM repeat domain
Telomere_reg-2 PF10193 632 - 743 2.4e-22 Telomere length regulation protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1808, 2600
AccBSI CCGCTC 1 cut(s) 2747
AccI GTMKAC 4 cut(s) 96, 781, 1441, 3022
AciI CCGC 5 cut(s) 5, 111, 772, 2095, 2747
AclI AACGTT 1 cut(s) 275
AclWI GGATC 7 cut(s) 143, 382, 935, 1724, 2297, 2374, 2858
AcsI RAATTY 1 cut(s) 1571
AcuI CTGAAG 4 cut(s) 1292, 1671, 2106, 2241
AcyI GRCGYC 1 cut(s) 2631
AfaI GTAC 7 cut(s) 185, 662, 1467, 1532, 2037, 2338, 2488
AfiI CCNNNNNNNGG 3 cut(s) 912, 1254, 2746
AflIII ACRYGT 1 cut(s) 1374
AgeI ACCGGT 1 cut(s) 1180
AjiI CACGTC 1 cut(s) 785
AjnI CCWGG 5 cut(s) 584, 1365, 1453, 2312, 2419
Alw21I GWGCWC 4 cut(s) 510, 1918, 2107, 2842
Alw26I GTCTC 7 cut(s) 73, 239, 572, 2354, 2502, 2889, 2927
AlwI GGATC 7 cut(s) 143, 382, 935, 1724, 2297, 2374, 2858
AlwNI CAGNNNCTG 1 cut(s) 1315
Ama87I CYCGRG 2 cut(s) 282, 2958
AoxI GGCC 2 cut(s) 723, 2730
ApoI RAATTY 1 cut(s) 1571
ArsI GACNNNNNNTTYG 2 cut(s) 1556, 1588
AsiGI ACCGGT 1 cut(s) 1180
AspLEI GCGC 1 cut(s) 2196
AspS9I GGNCC 3 cut(s) 895, 2279, 2749
AsuC2I CCSGG 3 cut(s) 143, 166, 907
AsuHPI GGTGA 7 cut(s) 1217, 1634, 1980, 2027, 2081, 2714, 2777
AsuNHI GCTAGC 1 cut(s) 1478
AvaI CYCGRG 2 cut(s) 282, 2958
AvaII GGWCC 3 cut(s) 895, 2279, 2749
BaeGI GKGCMC 1 cut(s) 1178
BanII GRGCYC 4 cut(s) 1918, 2107, 2842, 2866
BauI CACGAG 1 cut(s) 2120
Bbv12I GWGCWC 4 cut(s) 510, 1918, 2107, 2842
BceAI ACGGC 3 cut(s) 50, 113, 1602
BcgI CGANNNNNNTGC 2 cut(s) 721, 755
BciT130I CCWGG 5 cut(s) 586, 1367, 1455, 2314, 2421
BciVI GTATCC 1 cut(s) 874
BcnI CCSGG 3 cut(s) 143, 166, 907
BcoDI GTCTC 7 cut(s) 73, 239, 572, 2354, 2502, 2889, 2927
BfmI CTRYAG 7 cut(s) 199, 207, 219, 1274, 1347, 1438, 2408
BfuI GTATCC 1 cut(s) 874
BglI GCCNNNNNGGC 1 cut(s) 2942
BglII AGATCT 2 cut(s) 597, 1459
BlpI GCTNAGC 1 cut(s) 993
BmcAI AGTACT 1 cut(s) 2488
Bme1390I CCNGG 8 cut(s) 143, 166, 586, 907, 1367, 1455, 2314, 2421
Bme18I GGWCC 3 cut(s) 895, 2279, 2749
BmeT110I CYCGRG 2 cut(s) 282, 2958
BmgBI CACGTC 1 cut(s) 785
BmgT120I GGNCC 3 cut(s) 895, 2279, 2749
BmiI GGNNCC 5 cut(s) 405, 897, 1845, 2280, 2456
BmrFI CCNGG 8 cut(s) 143, 166, 586, 907, 1367, 1455, 2314, 2421
BmrI ACTGGG 2 cut(s) 1576, 2392
BmtI GCTAGC 1 cut(s) 1482
BmuI ACTGGG 2 cut(s) 1576, 2392
BpmI CTGGAG 2 cut(s) 1388, 1466
Bpu1102I GCTNAGC 1 cut(s) 993
BpuEI CTTGAG 4 cut(s) 494, 554, 819, 1190
BpuMI CCSGG 3 cut(s) 143, 166, 907
Bsa29I ATCGAT 1 cut(s) 2392
BsaHI GRCGYC 1 cut(s) 2631
BsaI GGTCTC 1 cut(s) 2502
BsaJI CCNNGG 5 cut(s) 1453, 2312, 2342, 2605, 2808
BsaWI WCCGGW 1 cut(s) 1180
BsaXI ACNNNNNCTCC 6 cut(s) 51, 81, 1361, 1391, 1449, 1479
Bsc4I CCNNNNNNNGG 3 cut(s) 912, 1254, 2746
Bse118I RCCGGY 1 cut(s) 1180
Bse1I ACTGG 5 cut(s) 1449, 1571, 2387, 2498, 2980
Bse3DI GCAATG 4 cut(s) 565, 1054, 2335, 2648
BseBI CCWGG 5 cut(s) 586, 1367, 1455, 2314, 2421
BseCI ATCGAT 1 cut(s) 2392
BseDI CCNNGG 5 cut(s) 1453, 2312, 2342, 2605, 2808
BseGI GGATG 6 cut(s) 997, 1141, 1411, 1867, 1909, 2656
BseLI CCNNNNNNNGG 3 cut(s) 912, 1254, 2746
BseMI GCAATG 4 cut(s) 565, 1054, 2335, 2648
BseMII CTCAG 6 cut(s) 711, 984, 1263, 2349, 2513, 2895
BseNI ACTGG 5 cut(s) 1449, 1571, 2387, 2498, 2980
BseSI GKGCMC 1 cut(s) 1178
BsgI GTGCAG 2 cut(s) 359, 700
Bsh1285I CGRYCG 2 cut(s) 147, 2893
BshFI GGCC 2 cut(s) 725, 2732
BshTI ACCGGT 1 cut(s) 1180
BshVI ATCGAT 1 cut(s) 2392
BsiEI CGRYCG 2 cut(s) 147, 2893
BsiHKAI GWGCWC 4 cut(s) 510, 1918, 2107, 2842
BsiHKCI CYCGRG 2 cut(s) 282, 2958
BsiSI CCGG 4 cut(s) 143, 165, 907, 1181
BslFI GGGAC 4 cut(s) 25, 191, 2292, 2606
BslI CCNNNNNNNGG 3 cut(s) 912, 1254, 2746
BsmAI GTCTC 7 cut(s) 73, 239, 572, 2354, 2502, 2889, 2927
BsmBI CGTCTC 2 cut(s) 73, 239
BsmFI GGGAC 4 cut(s) 25, 191, 2292, 2606
BsnI GGCC 2 cut(s) 725, 2732
Bso31I GGTCTC 1 cut(s) 2502
BsoBI CYCGRG 2 cut(s) 282, 2958
Bsp1286I GDGCHC 6 cut(s) 510, 1178, 1918, 2107, 2842, 2866
Bsp1720I GCTNAGC 1 cut(s) 993
Bsp19I CCATGG 1 cut(s) 2342
BspACI CCGC 5 cut(s) 5, 111, 772, 2095, 2747
BspANI GGCC 2 cut(s) 725, 2732
BspCNI CTCAG 6 cut(s) 712, 985, 1262, 2350, 2512, 2894
BspDI ATCGAT 1 cut(s) 2392
BspLI GGNNCC 5 cut(s) 405, 897, 1845, 2280, 2456
BspMAI CTGCAG 3 cut(s) 223, 1278, 1351
BspOI GCTAGC 1 cut(s) 1482
BspPI GGATC 7 cut(s) 143, 382, 935, 1724, 2297, 2374, 2858
BspQI GCTCTTC 3 cut(s) 2737, 2871, 2952
BspTNI GGTCTC 1 cut(s) 2502
BsrBI CCGCTC 1 cut(s) 2747
BsrDI GCAATG 4 cut(s) 565, 1054, 2335, 2648
BsrFI RCCGGY 1 cut(s) 1180
BsrI ACTGG 5 cut(s) 1449, 1571, 2387, 2498, 2980
BssAI RCCGGY 1 cut(s) 1180
BssECI CCNNGG 5 cut(s) 1453, 2312, 2342, 2605, 2808
BssNI GRCGYC 1 cut(s) 2631
BssSI CACGAG 1 cut(s) 2120
BssT1I CCWWGG 3 cut(s) 2342, 2605, 2808
Bst2BI CACGAG 1 cut(s) 2120
Bst2UI CCWGG 5 cut(s) 586, 1367, 1455, 2314, 2421
Bst4CI ACNGT 7 cut(s) 627, 736, 1418, 1766, 2412, 2486, 2900
Bst6I CTCTTC 7 cut(s) 143, 2691, 2737, 2770, 2787, 2871, 2952
BstACI GRCGYC 1 cut(s) 2631
BstC8I GCNNGC 5 cut(s) 1077, 1299, 1480, 1983, 2238
BstDEI CTNAG 9 cut(s) 15, 367, 720, 993, 1249, 1919, 2358, 2499, 2881
BstDSI CCRYGG 1 cut(s) 2342
BstEII GGTNACC 1 cut(s) 2015
BstF5I GGATG 6 cut(s) 997, 1141, 1411, 1867, 1909, 2656
BstHHI GCGC 1 cut(s) 2196
BstMAI GTCTC 7 cut(s) 73, 239, 572, 2354, 2502, 2889, 2927
BstMCI CGRYCG 2 cut(s) 147, 2893
BstMWI GCNNNNNNNGC 5 cut(s) 71, 2111, 2225, 2942, 2997
BstNI CCWGG 5 cut(s) 586, 1367, 1455, 2314, 2421
BstNSI RCATGY 3 cut(s) 95, 1378, 2626
BstPI GGTNACC 1 cut(s) 2015
BstSCI CCNGG 8 cut(s) 141, 164, 584, 905, 1365, 1453, 2312, 2419
BstSFI CTRYAG 7 cut(s) 199, 207, 219, 1274, 1347, 1438, 2408
BstSLI GKGCMC 1 cut(s) 1178
BstX2I RGATCY 6 cut(s) 374, 597, 940, 1459, 2302, 2366
BstYI RGATCY 6 cut(s) 374, 597, 940, 1459, 2302, 2366
Bsu15I ATCGAT 1 cut(s) 2392
BsuI GTATCC 1 cut(s) 874
BsuRI GGCC 2 cut(s) 725, 2732
BsuTUI ATCGAT 1 cut(s) 2392
BtgI CCRYGG 1 cut(s) 2342
BtgZI GCGATG 2 cut(s) 1028, 1809
BtrI CACGTC 1 cut(s) 785
BtsCI GGATG 6 cut(s) 997, 1141, 1411, 1867, 1909, 2656
BtsI GCAGTG 1 cut(s) 939
BtsIMutI CAGTG 5 cut(s) 342, 717, 939, 1074, 1548
Cac8I GCNNGC 5 cut(s) 1077, 1299, 1480, 1983, 2238
CaiI CAGNNNCTG 1 cut(s) 1315
CfoI GCGC 1 cut(s) 2196
Cfr10I RCCGGY 1 cut(s) 1180
Cfr13I GGNCC 3 cut(s) 895, 2279, 2749
ClaI ATCGAT 1 cut(s) 2392
CseI GACGC 2 cut(s) 1811, 2620
Csp6I GTAC 7 cut(s) 184, 661, 1466, 1531, 2036, 2337, 2487
CspAI ACCGGT 1 cut(s) 1180
CviQI GTAC 7 cut(s) 184, 661, 1466, 1531, 2036, 2337, 2487
DdeI CTNAG 9 cut(s) 15, 367, 720, 993, 1249, 1919, 2358, 2499, 2881
DrdI GACNNNNNNGTC 2 cut(s) 1808, 2600
DseDI GACNNNNNNGTC 2 cut(s) 1808, 2600
Eam1104I CTCTTC 7 cut(s) 143, 2691, 2737, 2770, 2787, 2871, 2952
EarI CTCTTC 7 cut(s) 143, 2691, 2737, 2770, 2787, 2871, 2952
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 3 cut(s) 1916, 2105, 2840
Eco130I CCWWGG 3 cut(s) 2342, 2605, 2808
Eco147I AGGCCT 1 cut(s) 2732
Eco24I GRGCYC 4 cut(s) 1918, 2107, 2842, 2866
Eco31I GGTCTC 1 cut(s) 2502
Eco32I GATATC 1 cut(s) 2289
Eco47I GGWCC 3 cut(s) 895, 2279, 2749
Eco53kI GAGCTC 3 cut(s) 1916, 2105, 2840
Eco57I CTGAAG 4 cut(s) 1292, 1671, 2106, 2241
Eco88I CYCGRG 2 cut(s) 282, 2958
Eco91I GGTNACC 1 cut(s) 2015
EcoICRI GAGCTC 3 cut(s) 1916, 2105, 2840
EcoO109I RGGNCCY 1 cut(s) 2279
EcoO65I GGTNACC 1 cut(s) 2015
EcoRII CCWGG 5 cut(s) 584, 1365, 1453, 2312, 2419
EcoRV GATATC 1 cut(s) 2289
EcoT14I CCWWGG 3 cut(s) 2342, 2605, 2808
EcoT22I ATGCAT 1 cut(s) 2658
EcoT38I GRGCYC 4 cut(s) 1918, 2107, 2842, 2866
ErhI CCWWGG 3 cut(s) 2342, 2605, 2808
Esp3I CGTCTC 2 cut(s) 73, 239
FaqI GGGAC 4 cut(s) 25, 191, 2292, 2606
FauI CCCGC 1 cut(s) 779
FauNDI CATATG 1 cut(s) 1849
FblI GTMKAC 4 cut(s) 96, 781, 1441, 3022
FokI GGATG 6 cut(s) 984, 1128, 1418, 1874, 1916, 2643
FriOI GRGCYC 4 cut(s) 1918, 2107, 2842, 2866
GlaI GCGC 1 cut(s) 2195
GsuI CTGGAG 2 cut(s) 1388, 1466
HaeIII GGCC 2 cut(s) 725, 2732
HapII CCGG 4 cut(s) 143, 165, 907, 1181
HgaI GACGC 2 cut(s) 1811, 2620
HhaI GCGC 1 cut(s) 2196
Hin1I GRCGYC 1 cut(s) 2631
Hin6I GCGC 1 cut(s) 2194
HinP1I GCGC 1 cut(s) 2194
HincII GTYRAC 4 cut(s) 97, 782, 2578, 2805
HindII GTYRAC 4 cut(s) 97, 782, 2578, 2805
HindIII AAGCTT 2 cut(s) 1014, 1299
HinfI GANTC 9 cut(s) 1103, 1522, 1541, 1661, 2002, 2078, 2138, 2879, 2969
HpaII CCGG 4 cut(s) 143, 165, 907, 1181
HphI GGTGA 7 cut(s) 1217, 1634, 1980, 2027, 2081, 2714, 2777
Hpy166II GTNNAC 7 cut(s) 97, 782, 1442, 2578, 2620, 2805, 3023
Hpy8I GTNNAC 7 cut(s) 97, 782, 1442, 2578, 2620, 2805, 3023
Hpy99I CGWCG 2 cut(s) 128, 786
HpyAV CCTTC 8 cut(s) 225, 1316, 2060, 2442, 2700, 2810, 3036, 3072
HpyCH4III ACNGT 7 cut(s) 627, 736, 1418, 1766, 2412, 2486, 2900
HpyCH4IV ACGT 5 cut(s) 248, 275, 784, 1757, 2858
HpyF10VI GCNNNNNNNGC 5 cut(s) 71, 2111, 2225, 2942, 2997
HpyF3I CTNAG 9 cut(s) 15, 367, 720, 993, 1249, 1919, 2358, 2499, 2881
HpySE526I ACGT 5 cut(s) 248, 275, 784, 1757, 2858
Hsp92I GRCGYC 1 cut(s) 2631
HspAI GCGC 1 cut(s) 2194
LguI GCTCTTC 3 cut(s) 2737, 2871, 2952
LmnI GCTCC 6 cut(s) 51, 1291, 1843, 1913, 2233, 2454
MaeII ACGT 5 cut(s) 248, 275, 784, 1757, 2858
MbiI CCGCTC 1 cut(s) 2747
MfeI CAATTG 3 cut(s) 727, 1286, 1560
MflI RGATCY 6 cut(s) 374, 597, 940, 1459, 2302, 2366
MhlI GDGCHC 6 cut(s) 510, 1178, 1918, 2107, 2842, 2866
MlyI GAGTC 3 cut(s) 1670, 1996, 2873
MmeI TCCRAC 6 cut(s) 37, 222, 296, 873, 1891, 2950
Mph1103I ATGCAT 1 cut(s) 2658
MseI TTAA 4 cut(s) 438, 806, 1646, 1760
MslI CAYNNNNRTG 4 cut(s) 351, 1002, 1047, 1146
MspA1I CMGCKG 1 cut(s) 2084
MspI CCGG 4 cut(s) 143, 165, 907, 1181
MspR9I CCNGG 8 cut(s) 143, 166, 586, 907, 1367, 1455, 2314, 2421
MunI CAATTG 3 cut(s) 727, 1286, 1560
MvaI CCWGG 5 cut(s) 586, 1367, 1455, 2314, 2421
MwoI GCNNNNNNNGC 5 cut(s) 71, 2111, 2225, 2942, 2997
NciI CCSGG 3 cut(s) 143, 166, 907
NcoI CCATGG 1 cut(s) 2342
NdeI CATATG 1 cut(s) 1849
NheI GCTAGC 1 cut(s) 1478
NlaIV GGNNCC 5 cut(s) 405, 897, 1845, 2280, 2456
NmeAIII GCCGAG 2 cut(s) 2607, 2962
NmuCI GTSAC 5 cut(s) 934, 1210, 1831, 2015, 2122
NsiI ATGCAT 1 cut(s) 2658
NspI RCATGY 3 cut(s) 95, 1378, 2626
PaeR7I CTCGAG 1 cut(s) 282
PceI AGGCCT 1 cut(s) 2732
PciI ACATGT 1 cut(s) 1374
PciSI GCTCTTC 3 cut(s) 2737, 2871, 2952
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PfeI GAWTC 6 cut(s) 1103, 1522, 1541, 2078, 2138, 2969
PfoI TCCNGGA 1 cut(s) 164
PinAI ACCGGT 1 cut(s) 1180
PleI GAGTC 3 cut(s) 1669, 1996, 2873
PpsI GAGTC 3 cut(s) 1669, 1996, 2873
PpuMI RGGWCCY 1 cut(s) 2279
PscI ACATGT 1 cut(s) 1374
Psp124BI GAGCTC 3 cut(s) 1918, 2107, 2842
Psp1406I AACGTT 1 cut(s) 275
Psp5II RGGWCCY 1 cut(s) 2279
Psp6I CCWGG 5 cut(s) 584, 1365, 1453, 2312, 2419
PspEI GGTNACC 1 cut(s) 2015
PspGI CCWGG 5 cut(s) 584, 1365, 1453, 2312, 2419
PspN4I GGNNCC 5 cut(s) 405, 897, 1845, 2280, 2456
PspPI GGNCC 3 cut(s) 895, 2279, 2749
PspPPI RGGWCCY 1 cut(s) 2279
PspXI VCTCGAGB 1 cut(s) 282
PsrI GAACNNNNNNTAC 4 cut(s) 344, 376, 960, 992
PstI CTGCAG 3 cut(s) 223, 1278, 1351
PstNI CAGNNNCTG 1 cut(s) 1315
PsuI RGATCY 6 cut(s) 374, 597, 940, 1459, 2302, 2366
PvuII CAGCTG 1 cut(s) 2084
RsaI GTAC 7 cut(s) 185, 662, 1467, 1532, 2037, 2338, 2488
RsaNI GTAC 7 cut(s) 184, 661, 1466, 1531, 2036, 2337, 2487
RseI CAYNNNNRTG 4 cut(s) 351, 1002, 1047, 1146
SacI GAGCTC 3 cut(s) 1918, 2107, 2842
SalI GTCGAC 2 cut(s) 95, 780
SapI GCTCTTC 3 cut(s) 2737, 2871, 2952
SaqAI TTAA 4 cut(s) 438, 806, 1646, 1760
Sau96I GGNCC 3 cut(s) 895, 2279, 2749
ScaI AGTACT 1 cut(s) 2488
SchI GAGTC 3 cut(s) 1670, 1996, 2873
ScrFI CCNGG 8 cut(s) 143, 166, 586, 907, 1367, 1455, 2314, 2421
SduI GDGCHC 6 cut(s) 510, 1178, 1918, 2107, 2842, 2866
SfcI CTRYAG 7 cut(s) 199, 207, 219, 1274, 1347, 1438, 2408
Sfr274I CTCGAG 1 cut(s) 282
SinI GGWCC 3 cut(s) 895, 2279, 2749
SlaI CTCGAG 1 cut(s) 282
SmiMI CAYNNNNRTG 4 cut(s) 351, 1002, 1047, 1146
SmlI CTYRAG 5 cut(s) 282, 509, 569, 834, 1169
SmoI CTYRAG 5 cut(s) 282, 509, 569, 834, 1169
SseBI AGGCCT 1 cut(s) 2732
SsiI CCGC 5 cut(s) 5, 111, 772, 2095, 2747
SspI AATATT 3 cut(s) 535, 696, 2161
SstI GAGCTC 3 cut(s) 1918, 2107, 2842
StuI AGGCCT 1 cut(s) 2732
StyD4I CCNGG 8 cut(s) 141, 164, 584, 905, 1365, 1453, 2312, 2419
StyI CCWWGG 3 cut(s) 2342, 2605, 2808
TaaI ACNGT 7 cut(s) 627, 736, 1418, 1766, 2412, 2486, 2900
TaiI ACGT 5 cut(s) 251, 278, 787, 1760, 2861
TaqII GACCGA 2 cut(s) 2907, 3022
TatI WGTACW 3 cut(s) 183, 660, 2486
TauI GCSGC 1 cut(s) 2098
TfiI GAWTC 6 cut(s) 1103, 1522, 1541, 2078, 2138, 2969
Tru1I TTAA 4 cut(s) 438, 806, 1646, 1760
Tru9I TTAA 4 cut(s) 438, 806, 1646, 1760
TscAI CASTG 5 cut(s) 342, 724, 939, 1074, 1555
TseFI GTSAC 5 cut(s) 934, 1210, 1831, 2015, 2122
Tsp45I GTSAC 5 cut(s) 934, 1210, 1831, 2015, 2122
TspGWI ACGGA 5 cut(s) 112, 933, 1270, 1483, 1787
TspRI CASTG 5 cut(s) 342, 724, 939, 1074, 1555
VpaK11BI GGWCC 3 cut(s) 895, 2279, 2749
XapI RAATTY 1 cut(s) 1571
XbaI TCTAGA 1 cut(s) 2689
XceI RCATGY 3 cut(s) 95, 1378, 2626
XhoI CTCGAG 1 cut(s) 282
XmiI GTMKAC 4 cut(s) 96, 781, 1441, 3022
ZrmI AGTACT 1 cut(s) 2488
Zsp2I ATGCAT 1 cut(s) 2658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.