Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0004200

Physical Location & Seq

Genomic Coordinates Reverse (-)

31739537 .. 31746457

Gene Structure 6921 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG151800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGGAGGTTTTGGTAGAAATGGTGAGCTTCTGCGTATATCTTATATGGTATGCTCTCTTGTTGCGTGCAGATGTCGTTTCCAATTGGCTTGCTTGTTTCCCGTTTTCAGCACGGAAACATGTGTATGACGTCTTCTTTGTTAACGGACTTGCCACTGAGGTTGTTCAGATTTTGGTCCCTTGTCTACAGCAAAATGGAAGTGGTGATGTTGATGTCAACGCTGTTCACTCCAATACTGAAAGGTTACTTGTACTTTGCTTGGTTGAAAATAATGGGGTGCTCCAGATGGCTAGAGAATTTGGTGGCTCTTTCCAGTCTGAAGATTATACATATGAAAATCTCATGTCAACTGTATCTAGAGTGGCACAGATTGTTGCATCCATACCTGACAAAGCACAATTGAGAGCCCCGACTTCACTTTCAGCACATTTGTTCTTCAAGCAAGTTACCATTCAGCTTCTTTCTCTAGCAGAAGAAGGGAATATGGAGATATTAGATGGCTTCCGTGAAAGTAACATGAATGGGACCTTACTGTTTGTTGGGGAAACATTTTCTCATATATGTCGACGTGGATCTGTAGATGTGCTTTTAAGTGAAATAATCCCAAGGATTCGTAGACATGTCCGGAGTTTGTTATCATCAACTATGGACTCACTAGGTTCAGATGTTCTGGAATCAGACCCTGGTTCCCAATTTTGGTTGAATCTTATTCAAGCAATCAAAGATTCATATGCTGTGGAAAGAATGTCTGAGCAACTTTTACATCAGCTTGCAACTGAACAAGTGGGTGATATTGAAGCTTACTGGATTCTTTGGCTATTATTTCATCGGGTTTTCAAGAGCCAAATATCAGCGAGGTCCATGTTTACTGACAAGTTTTTAGTCTGGAAAGTATTTCCTATTTGTTGCCTTCGATGGATCCTTCAATTTTCCGTCCTTGAATGCGCACCAGATTCTAATTCACTTGCTAAAGGTCATAATACCCGCAATTTCTTAGACACGTTACAGCATCTGGTAGCAGTATGGTCTAAAAGGGAGTTTGTACAATCAGCCCCAGTCGAGCAGCAAATATATGTAACTGCTGGTGTAGGCCTTTCCCTAGAGCAGATGTCTAAGGAGGAATTAGATGAGACAAAGGATGTGCTGCATTCAATTCTCCAAGGAGTGAGCTGTAGGCTTGAAAGCCCTAATCATTTAGTACGGAAGATGGCTAGCTCTGTTGCTTTAGTTTTCTCCAAGGTGATTGATCCAAAAAATCCTCTATACCTTGATGACAGCCTAACTGGGGAGACTATTGACTGGGAATTTGGGTTGTCTACTCCTAAGAAAGGTACCCTGGGAACCTCAAGTTGCTTAGAAGAAGGTATTAACAAATCCAAAATATCTAAAACCTCAGTGCTGGAAGATGGCTTAAACCACAAAGCCAGTGGGAAGAGTAAAAGTAGGAAATTATCTGAAACAAAGTTGGTTGATCCAGACGAGATCATTGATCCTGTTACACTGAATTATGATTCCGTCTCTGATGAAGATGACAACAATGATAGTGAGGATTCTGATGTCTCAAGTGACTCATCTTTACAGCCATATGATTTATCAGATGATGACACAGATTTGAAAAGGAAATTTTCACAGTTGGTTGATGTAGTTGGGGCACTTCGGAAATCTGATGATGCTGATGGGGTGGAGAAGGCTCTTGAAGTTTCTGAAAAACTTGTGCAAGCATCACCTGATGAGCTTAAGTTTGTAGCAAGTGATCTCGTGAGAACCCTGGTACAGGTTCGTTGCTCTGACTTGGCTATAGAAGGTGAGGAAGATTCAGCTGAAGACAAGAGACAAAGAACATTGGTCGCTTTGCTTGTCACGTGTCCATTGGAGTCTCTTGAAACTTTAAACAAACTACTATATTCTCCTAATGTGGATGTCAGTCAGCGCTTACTGATTCTTGATGTAATGACCGAGGGGGCTGAGGAGCTTGCTGATACTAAAATTATGAAGGCTAAACATCAGACTAGGGCCCTCATATCGACCACATCAGAGACACAAGCTTGGTTCCTGCCTAGTGACATAGGTCCTCCTGGAGCTGGTGCCTGGAAAGAGATTTCAGAAACAAATTCTTTACTGAACTGGACAAATCGTTATGAGAGGGAACTTCCCCCAAAACCTGGTCAGATTAGGAGAGGAAAGACACGTCAATGGAGCATTAGATCAGCCAATGCACCAAAAAGCCAAATAGAATGGTCCCATAATAAGTTTCCAGTGTATGCAGCAGCATTTATGCTTCCTGCCATGCAGGGGTTTGATAAGAGAAGGCAAGGTGTTGACCTTCTTGATAGAGATTTTATCGTCCTGGGAAAACTCATCTATATGCTCGGAGTCTGTATGAAATGTGCAGCCATGCATCCGGAAGCATCTGCTCTGGCTGGCCCTCTTCTAGATATGCTAAGCTCCAGGGAGATTTGTTTTCACAAGGAAGCATTTGTCAGAAGATCTACCCTTTTTGCAGCTTCATGCGTATTGCTATCACTTCACCCCTCTTATGTAGCAACCTCCTTAGTTGAAGGCAATACTGAAATTTCTAACGGACTTGAATGGATTCGCACATGGGCCCTTCATGTAACTGAATCAGACACAGATAGAGAGTGTTATTCGATGGCTATGAAATGTCTGCAACTCCATGCTGAAATGGCCCTGCAAGCTTCTCGAGCACTAGAGTCGGCACAAAGCACGTCCAATGCAAAGAATGTTGTTGGGATTCCGTCCAATCTATCCAAGGGAACAATTATCATCCCCCACTCCAATGTGAAATACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03460 ko04150 map03460 map04150

Pfam Domains

Protein Families

Telomere_reg-2

Protein Analysis

936

Amino Acids

104.39

Weight (kDa)

5.2

Isoelectric Point (pI)

46.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TELO2_ARM	PF25320	194 - 434	1.1e-125	TELO2 ARM repeat domain
Telomere_reg-2	PF10193	544 - 655	3.1e-21	Telomere length regulation protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48470 AT3G48470
fragaria_vesca	FvH4_5g07361 FvH4_5g07460 FvH4_5g07490 FvH4_5g07490 FvH4_5g07490 FvH4_5g07490
malus_domestica	MD06G1154000.v1.1 MD14G1163600.v1.1
prunus_persica	Prupe.5G157000_v2.0.a1
pyrus_communis	pycom14g13630
rosa_chinensis	RchiOBHm_Chr7g0191161
rosa_laevigata	RLG00000004472
rosa_multiflora	Rmu_co8075350.1_g000001 Rmu_sc0000701.1_g000017 Rmu_sc0001585.1_g000002 Rmu_sc0016007.1_g000006 Rmu_sc0039738.1_g000001
rosa_roxburghii	Rroxscaffold_3G00263990
rosa_rugosa	Rorug06G0509300
rosa_samantha	Rh1AG145200 Rh1AG325800 Rh1CG136700 Rh1CG136800 Rh1DG151800 Rh5CG463100 Rh7AG116500 Rh7BG118700 Rh7CG121400 Rh7DG119700
rosa_wichuraiana	Rw1G028870 Rw7G010100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	132
Acc16I	TGCGCA	1 cut(s)	946
Acc65I	GGTACC	1 cut(s)	1331
AccB1I	GGYRCC	2 cut(s)	1331, 2084
AccB7I	CCANNNNNTGG	1 cut(s)	2162
AccI	GTMKAC	4 cut(s)	184, 565, 616, 1316
AccIII	TCCGGA	2 cut(s)	624, 2401
AciI	CCGC	1 cut(s)	985
AclWI	GGATC	6 cut(s)	580, 913, 926, 1241, 1466, 1484
AcsI	RAATTY	5 cut(s)	296, 1304, 1622, 2110, 2571
AcuI	CTGAAG	2 cut(s)	339, 1842
AcvI	CACGTG	1 cut(s)	1863
AcyI	GRCGYC	1 cut(s)	129
AfaI	GTAC	5 cut(s)	252, 1044, 1200, 1333, 1773
AfeI	AGCGCT	1 cut(s)	1931
AfiI	CCNNNNNNNGG	7 cut(s)	696, 1285, 1328, 1774, 2081, 2162, 2292
AflII	CTTAAG	1 cut(s)	1736
AflIII	ACRYGT	5 cut(s)	118, 619, 999, 1862, 2186
AjiI	CACGTC	3 cut(s)	569, 2189, 2727
AjnI	CCWGG	8 cut(s)	682, 1335, 1767, 2074, 2087, 2161, 2346, 2447
Alw21I	GWGCWC	2 cut(s)	282, 2707
Alw26I	GTCTC	7 cut(s)	1124, 1283, 1522, 1564, 1825, 1881, 2030
AlwI	GGATC	6 cut(s)	580, 913, 926, 1241, 1466, 1484
AlwNI	CAGNNNCTG	2 cut(s)	683, 1012
Ama87I	CYCGRG	1 cut(s)	2700
Aor13HI	TCCGGA	2 cut(s)	624, 2401
Aor51HI	AGCGCT	1 cut(s)	1931
AoxI	GGCC	5 cut(s)	1090, 2013, 2422, 2604, 2685
ApaI	GGGCCC	2 cut(s)	2017, 2608
ApeKI	GCWGC	6 cut(s)	1063, 1144, 2264, 2267, 2390, 2501
ApoI	RAATTY	5 cut(s)	296, 1304, 1622, 2110, 2571
ArsI	GACNNNNNNTTYG	4 cut(s)	119, 151, 1289, 1321
Asp700I	GAANNNNTTC	1 cut(s)	2592
Asp718I	GGTACC	1 cut(s)	1331
AspLEI	GCGC	2 cut(s)	947, 1932
AsuHPI	GGTGA	7 cut(s)	34, 215, 800, 1252, 1716, 1817, 2519
AsuNHI	GCTAGC	1 cut(s)	1211
AvaI	CYCGRG	1 cut(s)	2700
AvaII	GGWCC	5 cut(s)	175, 525, 858, 2069, 2238
BaeGI	GKGCMC	3 cut(s)	1654, 2017, 2608
BamHI	GGATCC	1 cut(s)	918
BanI	GGYRCC	2 cut(s)	1331, 2084
BanII	GRGCYC	3 cut(s)	409, 2017, 2608
BarI	GAAGNNNNNNTAC	2 cut(s)	116, 148
BauI	CACGAG	1 cut(s)	1757
BbrPI	CACGTG	1 cut(s)	1863
BbsI	GAAGAC	2 cut(s)	124, 1830
Bbv12I	GWGCWC	2 cut(s)	282, 2707
BbvCI	CCTCAGC	1 cut(s)	1965
BbvI	GCAGC	6 cut(s)	1075, 1131, 2276, 2279, 2402, 2513
BccI	CCATC	7 cut(s)	280, 491, 909, 1201, 1400, 1670, 2644
BcgI	CGANNNNNNTGC	4 cut(s)	2681, 2694, 2715, 2728
BciT130I	CCWGG	8 cut(s)	684, 1337, 1769, 2076, 2089, 2163, 2348, 2449
BcoDI	GTCTC	7 cut(s)	1124, 1283, 1522, 1564, 1825, 1881, 2030
BfmI	CTRYAG	4 cut(s)	185, 576, 1171, 1797
BfoI	RGCGCY	1 cut(s)	1933
BfrI	CTTAAG	1 cut(s)	1736
BglII	AGATCT	1 cut(s)	2486
BisI	GCNGC	6 cut(s)	1064, 1145, 2265, 2268, 2391, 2502
BlpI	GCTNAGC	1 cut(s)	2441
BlsI	GCNGC	6 cut(s)	1065, 1146, 2266, 2269, 2392, 2503
Bme1390I	CCNGG	8 cut(s)	684, 1337, 1769, 2076, 2089, 2163, 2348, 2449
Bme18I	GGWCC	5 cut(s)	175, 525, 858, 2069, 2238
BmeT110I	CYCGRG	1 cut(s)	2700
BmgBI	CACGTC	3 cut(s)	569, 2189, 2727
BmrFI	CCNGG	8 cut(s)	684, 1337, 1769, 2076, 2089, 2163, 2348, 2449
BmrI	ACTGGG	3 cut(s)	1049, 1293, 1309
BmsI	GCATC	6 cut(s)	386, 1018, 1660, 1730, 2407, 2417
BmtI	GCTAGC	1 cut(s)	1215
BmuI	ACTGGG	3 cut(s)	1049, 1293, 1309
BoxI	GACNNNNGTC	1 cut(s)	2067
BpiI	GAAGAC	2 cut(s)	124, 1830
BpmI	CTGGAG	3 cut(s)	266, 2097, 2431
Bpu10I	CCTNAGC	1 cut(s)	1965
Bpu1102I	GCTNAGC	1 cut(s)	2441
BpuEI	CTTGAG	2 cut(s)	1330, 1546
BsaAI	YACGTR	1 cut(s)	1863
BsaHI	GRCGYC	1 cut(s)	129
BsaWI	WCCGGW	2 cut(s)	624, 2401
Bsc4I	CCNNNNNNNGG	7 cut(s)	696, 1285, 1328, 1774, 2081, 2162, 2292
Bse1I	ACTGG	8 cut(s)	313, 809, 1055, 1288, 1304, 1425, 2129, 2255
BseAI	TCCGGA	2 cut(s)	624, 2401
BseBI	CCWGG	8 cut(s)	684, 1337, 1769, 2076, 2089, 2163, 2348, 2449
BseGI	GGATG	5 cut(s)	377, 1144, 1924, 2398, 2784
BseLI	CCNNNNNNNGG	7 cut(s)	696, 1285, 1328, 1774, 2081, 2162, 2292
BseMII	CTCAG	4 cut(s)	147, 741, 1407, 1956
BseNI	ACTGG	8 cut(s)	313, 809, 1055, 1288, 1304, 1425, 2129, 2255
BseRI	GAGGAG	1 cut(s)	1982
BseSI	GKGCMC	3 cut(s)	1654, 2017, 2608
BseXI	GCAGC	6 cut(s)	1075, 1131, 2276, 2279, 2402, 2513
BsgI	GTGCAG	2 cut(s)	87, 2409
BshFI	GGCC	5 cut(s)	1092, 2015, 2424, 2606, 2687
BshNI	GGYRCC	2 cut(s)	1331, 2084
BsiHKAI	GWGCWC	2 cut(s)	282, 2707
BsiHKCI	CYCGRG	1 cut(s)	2700
BsiSI	CCGG	2 cut(s)	625, 2402
BslFI	GGGAC	3 cut(s)	161, 538, 2224
BslI	CCNNNNNNNGG	7 cut(s)	696, 1285, 1328, 1774, 2081, 2162, 2292
BsmAI	GTCTC	7 cut(s)	1124, 1283, 1522, 1564, 1825, 1881, 2030
BsmBI	CGTCTC	1 cut(s)	1522
BsmFI	GGGAC	3 cut(s)	161, 538, 2224
BsmI	GAATGC	2 cut(s)	947, 1147
BsnI	GGCC	5 cut(s)	1092, 2015, 2424, 2606, 2687
BsoBI	CYCGRG	1 cut(s)	2700
Bsp120I	GGGCCC	2 cut(s)	2013, 2604
Bsp1286I	GDGCHC	6 cut(s)	282, 409, 1654, 2017, 2608, 2707
Bsp13I	TCCGGA	2 cut(s)	624, 2401
Bsp1407I	TGTACA	1 cut(s)	1042
Bsp143I	GATC	9 cut(s)	572, 918, 1246, 1471, 1482, 1489, 1753, 2204, 2486
Bsp1720I	GCTNAGC	1 cut(s)	2441
BspACI	CCGC	1 cut(s)	985
BspANI	GGCC	5 cut(s)	1092, 2015, 2424, 2606, 2687
BspCNI	CTCAG	4 cut(s)	148, 742, 1406, 1957
BspEI	TCCGGA	2 cut(s)	624, 2401
BspOI	GCTAGC	1 cut(s)	1215
BspPI	GGATC	6 cut(s)	580, 913, 926, 1241, 1466, 1484
BspT107I	GGYRCC	2 cut(s)	1331, 2084
BspTI	CTTAAG	1 cut(s)	1736
BsrGI	TGTACA	1 cut(s)	1042
BsrI	ACTGG	8 cut(s)	313, 809, 1055, 1288, 1304, 1425, 2129, 2255
BssMI	GATC	9 cut(s)	572, 918, 1246, 1471, 1482, 1489, 1753, 2204, 2486
BssNI	GRCGYC	1 cut(s)	129
BssSI	CACGAG	1 cut(s)	1757
BssT1I	CCWWGG	4 cut(s)	605, 1159, 1236, 2769
Bst2BI	CACGAG	1 cut(s)	1757
Bst2UI	CCWGG	8 cut(s)	684, 1337, 1769, 2076, 2089, 2163, 2348, 2449
Bst4CI	ACNGT	3 cut(s)	352, 534, 1632
Bst6I	CTCTTC	2 cut(s)	1427, 2433
BstACI	GRCGYC	1 cut(s)	129
BstAFI	CTTAAG	1 cut(s)	1736
BstAUI	TGTACA	1 cut(s)	1042
BstBAI	YACGTR	1 cut(s)	1863
BstC8I	GCNNGC	8 cut(s)	66, 90, 771, 1213, 1719, 1974, 2422, 2694
BstENI	CCTNNNNNAGG	2 cut(s)	1326, 1772
BstF5I	GGATG	5 cut(s)	377, 1144, 1924, 2398, 2784
BstH2I	RGCGCY	1 cut(s)	1933
BstHHI	GCGC	2 cut(s)	947, 1932
BstKTI	GATC	9 cut(s)	575, 921, 1249, 1474, 1485, 1492, 1756, 2207, 2489
BstMAI	GTCTC	7 cut(s)	1124, 1283, 1522, 1564, 1825, 1881, 2030
BstMBI	GATC	9 cut(s)	572, 918, 1246, 1471, 1482, 1489, 1753, 2204, 2486
BstMWI	GCNNNNNNNGC	3 cut(s)	2684, 2693, 2702
BstNI	CCWGG	8 cut(s)	684, 1337, 1769, 2076, 2089, 2163, 2348, 2449
BstNSI	RCATGY	2 cut(s)	122, 623
BstPAI	GACNNNNGTC	1 cut(s)	2067
BstSCI	CCNGG	8 cut(s)	682, 1335, 1767, 2074, 2087, 2161, 2346, 2447
BstSFI	CTRYAG	4 cut(s)	185, 576, 1171, 1797
BstSLI	GKGCMC	3 cut(s)	1654, 2017, 2608
BstV1I	GCAGC	6 cut(s)	1075, 1131, 2276, 2279, 2402, 2513
BstV2I	GAAGAC	2 cut(s)	124, 1830
BstX2I	RGATCY	3 cut(s)	572, 918, 2486
BstYI	RGATCY	3 cut(s)	572, 918, 2486
BsuRI	GGCC	5 cut(s)	1092, 2015, 2424, 2606, 2687
BtrI	CACGTC	3 cut(s)	569, 2189, 2727
BtsCI	GGATG	5 cut(s)	377, 1144, 1924, 2398, 2784
BtsIMutI	CAGTG	5 cut(s)	153, 1401, 1432, 1499, 2262
Cac8I	GCNNGC	8 cut(s)	66, 90, 771, 1213, 1719, 1974, 2422, 2694
CaiI	CAGNNNCTG	2 cut(s)	683, 1012
CfoI	GCGC	2 cut(s)	947, 1932
CsiI	ACCWGGT	1 cut(s)	2161
Csp6I	GTAC	5 cut(s)	251, 1043, 1199, 1332, 1772
CspCI	CAANNNNNGTGG	4 cut(s)	142, 177, 1408, 1443
CviQI	GTAC	5 cut(s)	251, 1043, 1199, 1332, 1772
DpnI	GATC	9 cut(s)	574, 920, 1248, 1473, 1484, 1491, 1755, 2206, 2488
DpnII	GATC	9 cut(s)	572, 918, 1246, 1471, 1482, 1489, 1753, 2204, 2486
DraI	TTTAAA	1 cut(s)	1890
Eam1104I	CTCTTC	2 cut(s)	1427, 2433
EarI	CTCTTC	2 cut(s)	1427, 2433
Eco130I	CCWWGG	4 cut(s)	605, 1159, 1236, 2769
Eco147I	AGGCCT	1 cut(s)	1092
Eco24I	GRGCYC	3 cut(s)	409, 2017, 2608
Eco47I	GGWCC	5 cut(s)	175, 525, 858, 2069, 2238
Eco47III	AGCGCT	1 cut(s)	1931
Eco57I	CTGAAG	2 cut(s)	339, 1842
Eco72I	CACGTG	1 cut(s)	1863
Eco88I	CYCGRG	1 cut(s)	2700
EcoNI	CCTNNNNNAGG	2 cut(s)	1326, 1772
EcoO109I	RGGNCCY	5 cut(s)	525, 2013, 2014, 2069, 2605
EcoRII	CCWGG	8 cut(s)	682, 1335, 1767, 2074, 2087, 2161, 2346, 2447
EcoT14I	CCWWGG	4 cut(s)	605, 1159, 1236, 2769
EcoT22I	ATGCAT	1 cut(s)	2400
EcoT38I	GRGCYC	3 cut(s)	409, 2017, 2608
ErhI	CCWWGG	4 cut(s)	605, 1159, 1236, 2769
Esp3I	CGTCTC	1 cut(s)	1522
FaqI	GGGAC	3 cut(s)	161, 538, 2224
FauI	CCCGC	1 cut(s)	992
FauNDI	CATATG	3 cut(s)	331, 730, 1585
FblI	GTMKAC	4 cut(s)	184, 565, 616, 1316
Fnu4HI	GCNGC	6 cut(s)	1064, 1145, 2265, 2268, 2391, 2502
FokI	GGATG	5 cut(s)	364, 1151, 1931, 2385, 2771
FriOI	GRGCYC	3 cut(s)	409, 2017, 2608
Fsp4HI	GCNGC	6 cut(s)	1064, 1145, 2265, 2268, 2391, 2502
FspAI	RTGCGCAY	1 cut(s)	946
FspI	TGCGCA	1 cut(s)	946
GlaI	GCGC	2 cut(s)	946, 1931
GluI	GCNGC	6 cut(s)	1064, 1145, 2265, 2268, 2391, 2502
GsuI	CTGGAG	3 cut(s)	266, 2097, 2431
HaeII	RGCGCY	1 cut(s)	1933
HaeIII	GGCC	5 cut(s)	1092, 2015, 2424, 2606, 2687
HapII	CCGG	2 cut(s)	625, 2402
HhaI	GCGC	2 cut(s)	947, 1932
Hin1I	GRCGYC	1 cut(s)	129
Hin6I	GCGC	2 cut(s)	945, 1930
HinP1I	GCGC	2 cut(s)	945, 1930
HincII	GTYRAC	5 cut(s)	142, 217, 348, 566, 2320
HindII	GTYRAC	5 cut(s)	142, 217, 348, 566, 2320
HindIII	AAGCTT	3 cut(s)	798, 2043, 2694
HpaI	GTTAAC	1 cut(s)	142
HpaII	CCGG	2 cut(s)	625, 2402
HphI	GGTGA	7 cut(s)	34, 215, 800, 1252, 1716, 1817, 2519
Hpy99I	CGWCG	1 cut(s)	570
HpyCH4III	ACNGT	3 cut(s)	352, 534, 1632
HpyCH4IV	ACGT	6 cut(s)	129, 568, 1001, 1862, 2188, 2726
HpyF10VI	GCNNNNNNNGC	3 cut(s)	2684, 2693, 2702
HpySE526I	ACGT	6 cut(s)	129, 568, 1001, 1862, 2188, 2726
Hsp92I	GRCGYC	1 cut(s)	129
HspAI	GCGC	2 cut(s)	945, 1930
Kpn2I	TCCGGA	2 cut(s)	624, 2401
KpnI	GGTACC	1 cut(s)	1335
KspAI	GTTAAC	1 cut(s)	142
Kzo9I	GATC	9 cut(s)	572, 918, 1246, 1471, 1482, 1489, 1753, 2204, 2486
LmnI	GCTCC	5 cut(s)	285, 1969, 2078, 2196, 2450
Lsp1109I	GCAGC	6 cut(s)	1075, 1131, 2276, 2279, 2402, 2513
LweI	GCATC	6 cut(s)	386, 1018, 1660, 1730, 2407, 2417
MabI	ACCWGGT	1 cut(s)	2161
MaeII	ACGT	6 cut(s)	129, 568, 1001, 1862, 2188, 2726
MalI	GATC	9 cut(s)	574, 920, 1248, 1473, 1484, 1491, 1755, 2206, 2488
MboI	GATC	9 cut(s)	572, 918, 1246, 1471, 1482, 1489, 1753, 2204, 2486
MfeI	CAATTG	2 cut(s)	82, 398
MflI	RGATCY	3 cut(s)	572, 918, 2486
MhlI	GDGCHC	6 cut(s)	282, 409, 1654, 2017, 2608, 2707
MlyI	GAGTC	5 cut(s)	644, 1562, 1883, 2382, 2720
Mph1103I	ATGCAT	1 cut(s)	2400
MroI	TCCGGA	2 cut(s)	624, 2401
MroXI	GAANNNNTTC	1 cut(s)	2592
MseI	TTAA	6 cut(s)	141, 590, 1368, 1412, 1737, 1889
MslI	CAYNNNNRTG	4 cut(s)	123, 2191, 2363, 2796
MspA1I	CMGCKG	1 cut(s)	1820
MspCI	CTTAAG	1 cut(s)	1736
MspI	CCGG	2 cut(s)	625, 2402
MspR9I	CCNGG	8 cut(s)	684, 1337, 1769, 2076, 2089, 2163, 2348, 2449
MunI	CAATTG	2 cut(s)	82, 398
Mva1269I	GAATGC	2 cut(s)	947, 1147
MvaI	CCWGG	8 cut(s)	684, 1337, 1769, 2076, 2089, 2163, 2348, 2449
MwoI	GCNNNNNNNGC	3 cut(s)	2684, 2693, 2702
NdeI	CATATG	3 cut(s)	331, 730, 1585
NdeII	GATC	9 cut(s)	572, 918, 1246, 1471, 1482, 1489, 1753, 2204, 2486
NheI	GCTAGC	1 cut(s)	1211
NmuCI	GTSAC	3 cut(s)	1565, 1858, 2060
NsbI	TGCGCA	1 cut(s)	946
NsiI	ATGCAT	1 cut(s)	2400
NspI	RCATGY	2 cut(s)	122, 623
PaeR7I	CTCGAG	1 cut(s)	2700
PasI	CCCWGGG	1 cut(s)	1336
PceI	AGGCCT	1 cut(s)	1092
PciI	ACATGT	2 cut(s)	118, 619
PctI	GAATGC	2 cut(s)	947, 1147
PdmI	GAANNNNTTC	1 cut(s)	2592
PflMI	CCANNNNNTGG	1 cut(s)	2162
PfoI	TCCNGGA	1 cut(s)	2074
PkrI	GCNGC	6 cut(s)	1065, 1146, 2266, 2269, 2392, 2503
PleI	GAGTC	5 cut(s)	644, 1562, 1882, 2381, 2719
PmaCI	CACGTG	1 cut(s)	1863
PmlI	CACGTG	1 cut(s)	1863
PpsI	GAGTC	5 cut(s)	644, 1562, 1882, 2381, 2719
Ppu21I	YACGTR	1 cut(s)	1863
PpuMI	RGGWCCY	2 cut(s)	525, 2069
PscI	ACATGT	2 cut(s)	118, 619
PshAI	GACNNNNGTC	1 cut(s)	2067
Psp5II	RGGWCCY	2 cut(s)	525, 2069
Psp6I	CCWGG	8 cut(s)	682, 1335, 1767, 2074, 2087, 2161, 2346, 2447
PspCI	CACGTG	1 cut(s)	1863
PspGI	CCWGG	8 cut(s)	682, 1335, 1767, 2074, 2087, 2161, 2346, 2447
PspOMI	GGGCCC	2 cut(s)	2013, 2604
PspPPI	RGGWCCY	2 cut(s)	525, 2069
PstNI	CAGNNNCTG	2 cut(s)	683, 1012
PsuI	RGATCY	3 cut(s)	572, 918, 2486
PvuII	CAGCTG	1 cut(s)	1820
RsaI	GTAC	5 cut(s)	252, 1044, 1200, 1333, 1773
RsaNI	GTAC	5 cut(s)	251, 1043, 1199, 1332, 1772
RseI	CAYNNNNRTG	4 cut(s)	123, 2191, 2363, 2796
SalI	GTCGAC	1 cut(s)	564
SaqAI	TTAA	6 cut(s)	141, 590, 1368, 1412, 1737, 1889
SatI	GCNGC	6 cut(s)	1064, 1145, 2265, 2268, 2391, 2502
Sau3AI	GATC	9 cut(s)	572, 918, 1246, 1471, 1482, 1489, 1753, 2204, 2486
SchI	GAGTC	5 cut(s)	644, 1562, 1883, 2382, 2720
ScrFI	CCNGG	8 cut(s)	684, 1337, 1769, 2076, 2089, 2163, 2348, 2449
SduI	GDGCHC	6 cut(s)	282, 409, 1654, 2017, 2608, 2707
SexAI	ACCWGGT	1 cut(s)	2161
SfaNI	GCATC	6 cut(s)	386, 1018, 1660, 1730, 2407, 2417
SfcI	CTRYAG	4 cut(s)	185, 576, 1171, 1797
Sfr274I	CTCGAG	1 cut(s)	2700
SinI	GGWCC	5 cut(s)	175, 525, 858, 2069, 2238
SlaI	CTCGAG	1 cut(s)	2700
SmiMI	CAYNNNNRTG	4 cut(s)	123, 2191, 2363, 2796
SmlI	CTYRAG	4 cut(s)	1345, 1561, 1736, 2700
SmoI	CTYRAG	4 cut(s)	1345, 1561, 1736, 2700
SseBI	AGGCCT	1 cut(s)	1092
SsiI	CCGC	1 cut(s)	985
StuI	AGGCCT	1 cut(s)	1092
StyD4I	CCNGG	8 cut(s)	682, 1335, 1767, 2074, 2087, 2161, 2346, 2447
StyI	CCWWGG	4 cut(s)	605, 1159, 1236, 2769
TaaI	ACNGT	3 cut(s)	352, 534, 1632
TaiI	ACGT	6 cut(s)	132, 571, 1004, 1865, 2191, 2729
TaqI	TCGA	6 cut(s)	565, 913, 1059, 2024, 2648, 2701
TaqII	GACCGA	1 cut(s)	1970
TatI	WGTACW	2 cut(s)	250, 1042
Tru1I	TTAA	6 cut(s)	141, 590, 1368, 1412, 1737, 1889
Tru9I	TTAA	6 cut(s)	141, 590, 1368, 1412, 1737, 1889
TscAI	CASTG	5 cut(s)	160, 1401, 1432, 1506, 2262
TseFI	GTSAC	3 cut(s)	1565, 1858, 2060
TseI	GCWGC	6 cut(s)	1063, 1144, 2264, 2267, 2390, 2501
Tsp45I	GTSAC	3 cut(s)	1565, 1858, 2060
TspGWI	ACGGA	8 cut(s)	127, 159, 494, 922, 1216, 1504, 2595, 2745
TspRI	CASTG	5 cut(s)	160, 1401, 1432, 1506, 2262
Van91I	CCANNNNNTGG	1 cut(s)	2162
Vha464I	CTTAAG	1 cut(s)	1736
VpaK11BI	GGWCC	5 cut(s)	175, 525, 858, 2069, 2238
XagI	CCTNNNNNAGG	2 cut(s)	1326, 1772
XapI	RAATTY	5 cut(s)	296, 1304, 1622, 2110, 2571
XbaI	TCTAGA	2 cut(s)	356, 2431
XceI	RCATGY	2 cut(s)	122, 623
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1424
XhoI	CTCGAG	1 cut(s)	2700
XmiI	GTMKAC	4 cut(s)	184, 565, 616, 1316
XmnI	GAANNNNTTC	1 cut(s)	2592
ZraI	GACGTC	1 cut(s)	130
Zsp2I	ATGCAT	1 cut(s)	2400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.